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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. For. Glob. Change</journal-id>
<journal-title>Frontiers in Forests and Global Change</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. For. Glob. Change</abbrev-journal-title>
<issn pub-type="epub">2624-893X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/ffgc.2023.1108257</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Forests and Global Change</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Assessing the impact of abiotic and biotic factors on seedling survival in an African montane forest</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Abiem</surname> <given-names>Iveren</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/2040756/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Kenfack</surname> <given-names>David</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/648568/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Chapman</surname> <given-names>Hazel M.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/277599/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>School of Biological Sciences, University of Canterbury</institution>, <addr-line>Christchurch</addr-line>, <country>New Zealand</country></aff>
<aff id="aff2"><sup>2</sup><institution>Department of Plant Science and Biotechnology, University of Jos</institution>, <addr-line>Jos</addr-line>, <country>Nigeria</country></aff>
<aff id="aff3"><sup>3</sup><institution>Nigerian Montane Forest Project</institution>, <addr-line>Yelwa, Taraba</addr-line>, <country>Nigeria</country></aff>
<aff id="aff4"><sup>4</sup><institution>Forest Global Earth Observatory, Smithsonian Tropical Research Institute</institution>, <addr-line>Washington, DC</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Alexandra C. Morel, University of Dundee, United Kingdom</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Zerihun Woldu, Addis Ababa University, Ethiopia; Paul Dutton, Waikato Regional Council, New Zealand</p></fn>
<corresp id="c001">&#x002A;Correspondence: Iveren Abiem, <email>abiemiveren@gmail.com</email></corresp>
<fn fn-type="other" id="fn004"><p>This article was submitted to Tropical Forests, a section of the journal Frontiers in Forests and Global Change</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>23</day>
<month>02</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>6</volume>
<elocation-id>1108257</elocation-id>
<history>
<date date-type="received">
<day>25</day>
<month>11</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>09</day>
<month>02</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2023 Abiem, Kenfack and Chapman.</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Abiem, Kenfack and Chapman</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Tree seedling dynamics underpin subsequent forest structure and diversity as different species/guilds respond variously to abiotic and biotic stresses. Thus, understanding differential seedling responses to stresses helps us to predict forest trajectories. Because forests vary in both environment and species composition, generalisations across tropical forests are difficult. Afromontane forests are important carbon stores, harbour high diversity and provide critical ecosystem services, yet they are vulnerable to climate change. Here, we investigate the importance of key abiotic and biotic factors on survival of seedling guilds along spatial and temporal scales in a montane forest in south-eastern Nigeria. We use data from 318 seedling plots censused every 3 months from 2017 to 2020 to identify seven key abiotic and four biotic factors influencing seedling survival. We used the Kaplan&#x2013;Meier method to estimate the persistence time of 1,145 seedlings at community and guild levels. At the community level, newly recruited seedlings had a median survival time of 15 months and about 37% of the seedlings sampled where still alive after 24 months. Understory tree species survived significantly longer than the other growth form guilds and seedling survival did not differ across shade tolerance guilds. Conspecific adult density and steeper, more north facing slopes had a negative effect on tree seedlings survival. In addition, tree seedlings that recruited in October (end of wet season/beginning of dry) had lower survival probabilities compared to those that recruited in the other months. Except for initial height, seedling survival in lianas was not impacted by any of the abiotic and biotic variables tested. Our results suggest that under the current environment forest structure and diversity is changing, most noticeably lianas are increasing in abundance relative to trees.</p>
</abstract>
<kwd-group>
<kwd>Afromontane forest</kwd>
<kwd>biotic neighbourhood</kwd>
<kwd>negative density dependence</kwd>
<kwd>Ngel Nyaki</kwd>
<kwd>Nigeria</kwd>
<kwd>seedling survival</kwd>
</kwd-group>
<counts>
<fig-count count="6"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="84"/>
<page-count count="11"/>
<word-count count="8335"/>
</counts>
</article-meta>
</front>
<body>
<sec id="S1" sec-type="intro">
<title>1. Introduction</title>
<p>The seedling stage constitutes a significant bottleneck for forest regeneration (<xref ref-type="bibr" rid="B33">Harper, 1977</xref>; <xref ref-type="bibr" rid="B19">Comita et al., 2009</xref>; <xref ref-type="bibr" rid="B53">Martini et al., 2019</xref>; <xref ref-type="bibr" rid="B70">Ssali et al., 2019</xref>), so that understanding factors influencing seedling survival is essential for predicting future forest community structure and dynamics (<xref ref-type="bibr" rid="B42">Johnson et al., 2017</xref>; <xref ref-type="bibr" rid="B49">Lin et al., 2017</xref>). Moreover, because seedling recruitment varies greatly across both time and space (<xref ref-type="bibr" rid="B37">Janzen, 1970</xref>; <xref ref-type="bibr" rid="B20">Connell, 1971</xref>; <xref ref-type="bibr" rid="B30">Fricke et al., 2014</xref>; <xref ref-type="bibr" rid="B84">Zhu et al., 2018</xref>) incorporating both spatial and temporal variation into investigations of forest trajectories is essential (<xref ref-type="bibr" rid="B31">Gomes et al., 2020</xref>).</p>
<p>Abiotic and biotic factors influencing seedling dynamics are variable and complex (<xref ref-type="bibr" rid="B53">Martini et al., 2019</xref>). For example, biotic factors can be intrinsic, such as a seed&#x2019;s resources or a seedling&#x2019;s vigour, or extrinsic, such as predation and intraspecific or interspecific competition (<xref ref-type="bibr" rid="B18">Comita et al., 2014</xref>; <xref ref-type="bibr" rid="B51">Lu et al., 2015</xref>; <xref ref-type="bibr" rid="B26">Downey et al., 2018</xref>). Additionally, intrinsic factors may influence a seedling&#x2019;s response to extrinsic factors (<xref ref-type="bibr" rid="B17">Comita and Hubbell, 2009</xref>). For example, understory species generally produce fewer seeds than canopy species, resulting in fewer recruits than canopy trees (<xref ref-type="bibr" rid="B73">Terborgh et al., 2014</xref>). Fewer recruits reduce conspecific negative density dependence (CNDD) and associated repercussions (<xref ref-type="bibr" rid="B51">Lu et al., 2015</xref>). The local biotic neighbourhood has a significant impact on seedling survival dynamics through density and/or distance dependent factors (<xref ref-type="bibr" rid="B32">Harms et al., 2000</xref>; <xref ref-type="bibr" rid="B34">Hille Ris Lambers et al., 2002</xref>; <xref ref-type="bibr" rid="B18">Comita et al., 2014</xref>; <xref ref-type="bibr" rid="B63">Ramage et al., 2017</xref>; <xref ref-type="bibr" rid="B29">Forrister et al., 2019</xref>). Strong intraspecific competition or host-specific pests and pathogens can limit the survival of a seedling within a neighbourhood having a high density of same species neighbours (<xref ref-type="bibr" rid="B37">Janzen, 1970</xref>; <xref ref-type="bibr" rid="B20">Connell, 1971</xref>). Alternatively, a seedling in such a conspecific neighbourhood may benefit from intraspecific facilitation, favouring its survival (<xref ref-type="bibr" rid="B6">Baldeck et al., 2013</xref>; <xref ref-type="bibr" rid="B46">Lebrija-Trejos et al., 2014</xref>).</p>
<p>Abiotic factors are also important for seedling recruitment (<xref ref-type="bibr" rid="B53">Martini et al., 2019</xref>). While seedling survival is typically limited by only a few resources, including light, water, and soil nutrients, these resources can be limiting. Limited resources initiate trade-offs in performance among species in a community bringing about niche differentiation and coexistence (<xref ref-type="bibr" rid="B42">Johnson et al., 2017</xref>). Light is one of the most important abiotic factors limiting seedlings in tropical forests (<xref ref-type="bibr" rid="B19">Comita et al., 2009</xref>). Seedlings show increased growth and survival in higher light conditions (<xref ref-type="bibr" rid="B50">Lu et al., 2018</xref>). <xref ref-type="bibr" rid="B59">Oshima et al. (2015)</xref> in their study of dipterocarps in South-East Asia reported that canopy openness was a major factor affecting seedling survival and <xref ref-type="bibr" rid="B21">D&#x2019;andrea et al. (2020)</xref> suggest that in Barro Colorado Island, Panama forest community structure may be driven by competition for light.</p>
<p>Topographical features can influence seedling dynamics; slope, elevation, and aspect alter abiotic factors such as soil moisture and nutrients which affect the availability of resources in a site and a seedling&#x2019;s ability to acquire them (<xref ref-type="bibr" rid="B19">Comita et al., 2009</xref>; <xref ref-type="bibr" rid="B16">Comita and Engelbrecht, 2014</xref>). Microhabitats vary in space and time, and this influences recruitment success. For example, <xref ref-type="bibr" rid="B52">Ma et al. (2014)</xref> demonstrated a negative effect of increasing slope on seedling survival in a broad-leafed evergreen forest in China. In contrast, <xref ref-type="bibr" rid="B49">Lin et al. (2017)</xref> showed no effect of slope on seedling recruitment in a tropical Karst forest. Aspect has been shown to significantly impact the species assemblage in a tropical forest in Sri Lanka (<xref ref-type="bibr" rid="B61">Punchi-Manage et al., 2013</xref>), but did not affect adult tree mortality in a subtropical forest in Central China (<xref ref-type="bibr" rid="B82">Wu et al., 2017</xref>). Microtopography, such as pit and mound (<xref ref-type="bibr" rid="B7">Barker Plotkin et al., 2017</xref>) is another feature that can influence seedling survival in tropical forests. <xref ref-type="bibr" rid="B10">Born et al. (2015)</xref> demonstrate this for Dipterocarp seedlings in Malaysia, faster growing seedling species were more susceptible to flooding than slower growing species. Survival of particular <italic>Inga</italic> species in Neotropical lowland forests is strongly associated with microtopography (<xref ref-type="bibr" rid="B28">Endara and Jaramillo, 2011</xref>).</p>
<p>In addition to abiotic and biotic factors, seedling survival may also be influenced by timing of recruitment, especially in seasonal forests (<xref ref-type="bibr" rid="B49">Lin et al., 2017</xref>). Seedlings that establish in the wet season may have higher survival advantage to those that establish in the dry season because they are likely to grow faster, thus acquiring an initial size advantage (<xref ref-type="bibr" rid="B5">Bai et al., 2012</xref>).</p>
<p>Species traits are yet another component to understanding seedling dynamics in tropical forests (<xref ref-type="bibr" rid="B84">Zhu et al., 2018</xref>). For example, light requirement is often linked to a seedling&#x2019;s probability of survival (<xref ref-type="bibr" rid="B80">Wright et al., 2010</xref>; <xref ref-type="bibr" rid="B45">Kobe and Vriesendorp, 2011</xref>). Fast-growing, light-demanding species have higher mortality rates compared to slow growing, shade-tolerant species because the latter have functional traits such as higher wood density, longer lived leaves and better defence against pests that increase longevity (<xref ref-type="bibr" rid="B44">Kobe, 1999</xref>).</p>
<p>The many long-term studies that have assessed abiotic and biotic factors on seedling survival in tropical forests show that while some generalisations can be made (<xref ref-type="bibr" rid="B19">Comita et al., 2009</xref>; <xref ref-type="bibr" rid="B60">Paine and Harms, 2009</xref>; <xref ref-type="bibr" rid="B15">Chen et al., 2010</xref>; <xref ref-type="bibr" rid="B48">Lin et al., 2012</xref>; <xref ref-type="bibr" rid="B42">Johnson et al., 2017</xref>; <xref ref-type="bibr" rid="B53">Martini et al., 2019</xref>), different forest types behave differently (<xref ref-type="bibr" rid="B69">Spicer et al., 2020</xref>). Moreover, such studies are heavily biassed toward lowland tropical and subtropical forests. The role of abiotic and biotic factors in shaping plant recruitment and establishment in montane forests is poorly understood and they have rarely been examined together. A review by <xref ref-type="bibr" rid="B11">Chapman et al. (2016)</xref> points out how very little is known about regeneration of montane ecosystems and how it is important for research to include this valuable ecosystem which is highly susceptible to the negative impacts of climate change. With this in mind, we examined the abiotic and biotic factors contributing to seedling survival in a tropical montane forest in Nigeria. West African montane forests experience a unique set of abiotic and biotic stresses; they are typically restricted to steep slopes protected from fire and gazing (<xref ref-type="bibr" rid="B12">Chapman and Chapman, 2001</xref>), rainfall is limited to 6 months in a year and the dry season is made extremely severe by the dry Saharan desert Harmattan wind which lasts for 2&#x2013;3 months (<xref ref-type="bibr" rid="B38">Jenik and Hall, 1966</xref>).</p>
<p>In this study we asked the following questions: (i) How important are abiotic and biotic factors for the survival of newly recruited seedlings in the first 3-month interval after recruitment and is this affected by the time of recruitment? (ii) Are abiotic stresses more influential in determining seedling fate than the biotic neighbourhood? (iii) How does seedling survival vary across growth form and shade tolerance guilds? We hypothesised that abiotic factors such as slope, elevation, and aspect which influence light, wind, and moisture levels will impact seedling survival more than biotic factors in this Afromontane environment. Drought in particular may be a strong seedling filter. Dry conditions can also alter the spatial patterns and activities of herbivores and fungal pathogens (<xref ref-type="bibr" rid="B36">Inman-Narahari et al., 2016</xref>), thus reducing any Janzen&#x2013;Connell effects. We expected seedling survival to be higher for understory and shade tolerant species because they usually have fewer, more resilient seedlings that are less likely to succumb to negative density dependence (NDD) effects than canopy species.</p>
</sec>
<sec id="S2" sec-type="materials|methods">
<title>2. Materials and methods</title>
<sec id="S2.SS1">
<title>2.1. Study area</title>
<p>This study was carried out in the 20.28-ha Ngel Nyaki Forest Dynamics Plot (07&#x00B0;04&#x2032;05&#x2033;N; 11&#x00B0;03&#x2032;24&#x2033;E) in the Ngel Nyaki Forest Reserve on the Mambilla Plateau of south-eastern Nigeria. Ngel Nyaki forest reserve is 4,600 ha of mainly savanna but including two patches of species-rich sub-montane dry forest, which together cover 76 ha in area (<xref ref-type="bibr" rid="B12">Chapman and Chapman, 2001</xref>; <xref ref-type="bibr" rid="B9">Beck and Chapman, 2008</xref>). Details on the study area, study site, and anthropogenic threats to the forests are recorded in <xref ref-type="bibr" rid="B1">Abiem et al. (2020)</xref>. Of particular note is that the forest itself is small with extensive edges bordering onto overgrazed <italic>Sporobolus</italic> spp. Grassland that is burned annually as a management tool for cattle grazing. The reserve is usually protected from fire by creating fire breaks at the boundary, however in some years, fire accidentally gets into the reserve and burns portions of the grass land and the forest edges. Also, cattle sometimes enter the forest edges and trample. Hunting has greatly reduced population sizes of large bodied frugivores such as chimpanzees and hornbills. There are other indigenous fauna like duikers and antelopes whose populations have reduced as well.</p>
</sec>
<sec id="S2.SS2">
<title>2.2. Data collection</title>
<sec id="S2.SS2.SSS1">
<title>2.2.1. Seedling censuses</title>
<p>To study seedling regeneration in the forest, we established 318 m &#x00D7; 1 m seedling plots in the Ngel Nyaki Forest Dynamics Plot in October and November 2017. Seedling plots were associated with seed traps (see <xref ref-type="fig" rid="F1">Figure 1</xref>) placed systematically along trails in the plot at the beginning of 2017 (<italic>sensu</italic> <xref ref-type="bibr" rid="B81">Wright et al., 2005</xref>). Each seedling plot was assigned to a 5 &#x00D7; 5 m subquadrat of the plot. The first seedling census was conducted in October 2017. All seedlings &#x2264;50 cm tall and including trees, shrubs, and lianas encountered within the seedling plots were tagged, identified, measured for height, and their leaves counted. Nine repeat censuses were conducted at 3-month intervals after the first census (January&#x2013;February 2018, April&#x2013;May 2018, July&#x2013;August 2018, October&#x2013;November 2018, January&#x2013;February 2019, April&#x2013;May 2019, July&#x2013;August 2019, October&#x2013;November 2019, and January&#x2013;February 2020). For every repeat census, we recorded the status of a previously encountered seedling as alive or dead and re-measured the height and number of leaves for those seedlings that were alive. We also tagged, identified and measured any newly recruited seedlings. Focal seedling data used in this study were from seedlings recruited in the first eight repeat censuses for which we had at least a 3-month interval survival status data on.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Approximate positions of seedling plots in the 20.28 ha Ngel Nyaki Forest Dynamics Plot. Only seedling plots from which we sampled newly recruited seedlings are indicated.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="ffgc-06-1108257-g001.tif"/>
</fig>
</sec>
</sec>
<sec id="S2.SS3">
<title>2.3. Measurement of biotic factors</title>
<p>We quantified the local biotic neighbourhood in which every newly recruited seedling was growing. We calculated the total seedling density (S.tot) and the densities of conspecific and heterospecific seedlings (S.con and S.het) in each plot. Seedling neighbour densities for each seedling were estimated for the census period the seedling was first encountered. To account for the effect of saplings and larger trees, we calculated the density of all stems &#x2265;1 cm dbh by summing the inverse-distance weighted basal areas of all sapling and adults within a 20 m radius of the centre of the subquadrat where the seedling plot is located. We calculated total adult densities (A.tot) and separate densities for conspecific and heterospecific adults (A.con and A.het).</p>
</sec>
<sec id="S2.SS4">
<title>2.4. Measurement of abiotic factors</title>
<p>Topography: We calculated elevation, aspect, slope and landform. In every seedling plot, we used a Global Positioning Service (GPS) device (Garmin GPSMAP 64s GPS) to measure elevation and a compass to measure aspect. Percent slope was calculated for each seedling plot by dividing the difference in elevation between two marked points in the plot (rise) by the horizontal distance between them (run) and then multiplying the quotient by 100 [i.e., (rise/run) &#x00D7; 100]. Landform for each plot was assessed visually and labelled as pit (concave-shaped), mound (convex shaped), or flat. We also estimated litter depth for each seedling plot by measuring the depth of leaf litter and partially decomposed organic matter that accumulates on top of the mineral soil from five points in the plot using a metre rule and estimating the mean value for the plot.</p>
<p>Light intensity: We took light meter readings from three points within the seedling plot and concurrently from three points at a nearby large open gap. Measurements were taken at a height of 1.3 m. We used a PAR Quantum sensor (LI-190R, LI-COR Biosciences, Lincoln, NE, USA) with a light meter (LI-250A, LI-COR Biosciences, Lincoln, NE, USA). We calculated available light by dividing measurements taken in the forest by those taken in the open gap nearby within a 10-min interval (<xref ref-type="bibr" rid="B56">Moustakas and Evans, 2015</xref>).</p>
</sec>
<sec id="S2.SS5">
<title>2.5. Data analyses</title>
<p>We used generalised linear mixed-effects models with binomial errors to model the probability of an individual seedling surviving its first 3-month census interval as a function of the abiotic and biotic neighbourhood factors measured (described above). Log-transformed initial seedling height and initial number of leaves were included in the models as fixed effects. Aspect is a circular variable and so we transformed it to estimate northness and eastness using cos(aspect) which ranges between 1 for due north and &#x2212;1 for due south; and sin(aspect) which ranges between 1 for due east and &#x2212;1 for due west (<xref ref-type="bibr" rid="B66">Schwarz et al., 2003</xref>; <xref ref-type="bibr" rid="B51">Lu et al., 2015</xref>; <xref ref-type="bibr" rid="B53">Martini et al., 2019</xref>). We also included the month in which a seedling census was carried out as recruitment timing. January and April censuses were in the dry season while the July and October censuses were in the wet season. For each seedling, we assigned values of seedling densities and abiotic variables recorded for the census when they initially recruited. We standardised the values of all continuous independent variables by subtracting the mean and dividing by 1 SD. Species identity and seedling plot identity were included as random effects in the models to account for species variability and spatial autocorrelation respectively. Species vary in their survival probabilities and seedlings from the same plot tend to have similar survival probabilities compared to seedlings from other plots.</p>
<p>We analysed seedling survival for trees and shrubs separately from lianas. This is because during the census of woody stems &#x2265;1 cm dbh, lianas were not included and so, we do not have estimates on conspecific adult density for the lianas. We therefore analysed community-level survival for seedlings of tree and shrub species present in the adult census and also analysed community-level survival for seedlings of liana species. We also did not include the small understory shrubs <italic>Dracaena</italic> sp. and <italic>Brillantaisia owariensis</italic> as focal seedlings in our community-level analysis because their adults rarely reach &#x2265;1 cm dbh but they were included (and the lianas as well) in estimating neighbourhood densities. Initial plant height was significantly correlated to leaf number so we used only initial height in our models.</p>
<p>Our data were insufficient to perform species-specific and life-history guild analyses. All the tree species recorded had &#x2264;51 observations on seedling survival.</p>
<p>We used the non-parametric Kaplan&#x2013;Meier method to estimate survival time. We compared survivorship curves across growth forms (emergent tree, canopy tree, understory tree/shrub, and liana) and shade tolerance (light-demanding, intermediate light-demanding, and shade tolerant) groups.</p>
<p>All statistical analyses were performed using R.3.5.0. statistical software package (<xref ref-type="bibr" rid="B62">R Core Team, 2018</xref>) with <italic>lme4</italic> 1.1.15 package (<xref ref-type="bibr" rid="B8">Bates et al., 2015</xref>) and survival package (<xref ref-type="bibr" rid="B74">Therneau, 2019</xref>).</p>
</sec>
</sec>
<sec id="S3" sec-type="results">
<title>3. Results</title>
<p>Between January 2018 and January 2020, we recorded and monitored 1,145 newly recruited seedlings belonging to 49 species (See <xref ref-type="supplementary-material" rid="TS1">Supplementary Table 1</xref> for full species list and their abundances). Of these, 388 individuals, &#x223C;34%, belonged to species recorded in the previous 2015 adult census (<xref ref-type="bibr" rid="B1">Abiem et al., 2020</xref>), 654, &#x223C;57% were liana species and 103 &#x223C; 9% belonged to the shrubs <italic>Dracaena</italic> sp. and <italic>B. owariensis</italic>. The proportion of tree and shrub species recruitment versus lianas varied among the census times. Higher recruitment of tree and shrub seedlings occurred in the third census (July&#x2013;August 2018) while a higher recruitment of liana seedlings occurred in the first census (January&#x2013;February 2018). Recruitment of tree and shrub seedlings was lowest in the sixth census (April&#x2013;May 2019) while the seventh census (July&#x2013;August 2019) recorded the lowest recruitment of liana seedlings. Taken together, higher recruitment in trees and shrubs occurred in the wet season (July and October) than in the dry season (January and April), while for lianas the opposite was true. Most of the recorded seedlings (82%) were between the height range of 5 and 20 cm.</p>
<sec id="S3.SS1">
<title>3.1. Effect of biotic and abiotic factors on seedling survival</title>
<p>In all the censuses, the tree seedling community had 22% mortality while the liana community had 16% mortality. Both abiotic and biotic factors affected seedling survival (<xref ref-type="fig" rid="F2">Figures 2</xref>, <xref ref-type="fig" rid="F3">3</xref>). Initial plant height was strongly associated with seedling survival; for both tree and liana communities, taller seedlings had a higher probability of survival (Log odds ratio = 0.52, <italic>P</italic> &#x003C; 0.001 and Log odds ratio = 0.49, <italic>P</italic> &#x003C; 0.001; <xref ref-type="fig" rid="F2">Figures 2</xref>, <xref ref-type="fig" rid="F3">3</xref>). The conspecific adult density showed a significant negative impact on seedling survival (Log odds ratio = &#x2212;0.26, <italic>P</italic> = 0.047; <xref ref-type="fig" rid="F2">Figure 2</xref>). In contrast, the biotic neighbourhood-heterospecific &#x201C;tree&#x201D; adult density, conspecific seedling density, and heterospecific seedling density, had no significant effect on seedling survival in the liana community. Among the abiotic predictors tested in the tree community, only slope and aspect were significant (<xref ref-type="fig" rid="F2">Figure 2</xref>). Slope had a negative effect on seedling survival meaning steeper sites had lower survival. Sin(aspect) had a positive effect on seedling survival meaning survival was higher on east-facing slopes than west-facing slopes; while cos(aspect) had a negative effect on seedling survival meaning southward facing slopes had higher seedling survival than northward facing slopes (<xref ref-type="fig" rid="F2">Figure 2</xref>). Tree and shrub seedlings that recruited in the month of October, toward the very end of the wet season, had significantly lower survival probability than those that recruited in the other months (Log odds ratio = &#x2212;1.46, <italic>P</italic> = 0.01).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Parameter estimates (&#x00B1;2 SE) from generalised linear mixed effects model (GLMM) fitted to test the effects of abiotic and biotic factors on seedling survival of tree and shrub species in the Ngel Nyaki forest. Filled points indicate significant effects (<italic>P</italic> &#x003C; 0.05).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="ffgc-06-1108257-g002.tif"/>
</fig>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption><p>Parameter estimates (&#x00B1;2 SE) from generalised linear mixed effects model (GLMM) fitted to test the effects of abiotic and biotic factors on seedling survival of liana species in the Ngel Nyaki forest. Filled points indicate significant effects (<italic>P</italic> &#x003C; 0.05).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="ffgc-06-1108257-g003.tif"/>
</fig>
<p>For liana seedlings, the neighbourhood abiotic and biotic factors did not significantly affect seedling survival (<xref ref-type="fig" rid="F3">Figure 3</xref>).</p>
<p>The summaries of the generalised linear mixed effects models used are recorded in <xref ref-type="supplementary-material" rid="TS1">Supplementary Tables 2</xref>, <xref ref-type="supplementary-material" rid="TS1">3</xref>.</p>
</sec>
<sec id="S3.SS2">
<title>3.2. Survival analyses</title>
<p>In the survival analysis using the Kaplan&#x2013;Maier method, the median survival time of seedlings was 15 months (<xref ref-type="fig" rid="F4">Figure 4</xref>). Approximately 37% of the seedlings sampled where still alive after 24 months (<xref ref-type="fig" rid="F4">Figure 4</xref>). The results showed that the probability on an understory species surviving was higher compared to other growth forms for the duration of the study (<italic>P</italic> &#x003C; 0.0001; <xref ref-type="fig" rid="F5">Figure 5</xref>). Seedling survival did not differ across shade tolerance guilds although shade tolerant species had higher survival probability over time (<xref ref-type="fig" rid="F6">Figure 6</xref>).</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption><p>Estimated survival probabilities of all species seedlings encountered in seedling censuses in the Ngel Nyaki Forest Dynamics Plot from January 2018 to January 2020. Solid line represents estimated survival average probabilities, and the dotted lines show the 95% CI. The survival function was calculated using the Kaplan&#x2013;Meier method.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="ffgc-06-1108257-g004.tif"/>
</fig>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption><p>Estimated survival probabilities of seedlings across growth form guilds in the Ngel Nyaki Forest Dynamics Plot from January 2018 to January 2020. The lines represent estimated survival average probabilities for the different groups. The survival functions were calculated using the Kaplan&#x2013;Meier method.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="ffgc-06-1108257-g005.tif"/>
</fig>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption><p>Estimated survival probabilities of seedlings across shade-tolerance guilds in the Ngel Nyaki Forest Dynamics Plot from January 2018 to January 2020. The lines represent estimated survival average probabilities for the different groups. The survival functions were calculated using the Kaplan&#x2013;Meier method.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="ffgc-06-1108257-g006.tif"/>
</fig>
</sec>
</sec>
<sec id="S4" sec-type="discussion">
<title>4. Discussion</title>
<p>The aim of our research was to explore key abiotic and biotic factors influencing the seedling dynamics of tree and liana seedlings in the Ngel Nyaki Forest Dynamics Plot to better understand Afromontane forest demographics and thus help us in predicting future forest structure and diversity. Most noticeable in terms of species trajectories was that almost two-thirds of all recruited seedlings in our study belonged to just two liana species &#x2013; <italic>Landolphia</italic> sp. (Apocynaceae) and <italic>Paullinia pinnata</italic> (Sapindaceae). An abundance of liana relative to tree seedlings corroborates reports from other tropical forests that liana density is disproportionally increasing (<xref ref-type="bibr" rid="B65">Schnitzer et al., 2012</xref>; <xref ref-type="bibr" rid="B72">Sun et al., 2022</xref>), with potentially adverse consequences for trees (<xref ref-type="bibr" rid="B64">Schnitzer and Bongers, 2011</xref>; <xref ref-type="bibr" rid="B78">Venegas-Gonz&#x00E1;lez et al., 2020</xref>), but see <xref ref-type="bibr" rid="B76">Uma&#x00F1;a et al. (2020)</xref>. One explanation for an increase in liana seedlings could be a seasonal growth advantage (SGA), because lianas are able to grow faster than trees during seasonal drought (<xref ref-type="bibr" rid="B72">Sun et al., 2022</xref> and references within). However, while this may be the case for adult lianas (<xref ref-type="bibr" rid="B72">Sun et al., 2022</xref>), to what extent this applies to seedlings is unclear and results are mixed. <xref ref-type="bibr" rid="B47">Ledo and Schnitzer (2014)</xref> and <xref ref-type="bibr" rid="B75">Uma&#x00F1;a et al. (2019)</xref> found that liana seedlings did benefit from dry conditions and disturbance, <xref ref-type="bibr" rid="B79">Vogado et al. (2022)</xref> attributed increasing liana abundances to increased CO<sub>2</sub> concentrations, while light availability has been found to be more important for liana seedling survival in some other studies (<xref ref-type="bibr" rid="B3">Addo-Fordjour and Rahmad, 2015</xref>; <xref ref-type="bibr" rid="B23">De Campos Franci et al., 2016</xref>). The only significant factor we found affecting liana seedling survival in this study was seedling height, which was not linked to any other measured abiotic or biotic factors. Our findings corroborate those of <xref ref-type="bibr" rid="B25">Dewalt et al. (2015)</xref> who similarly reported that seedling survival in lianas was unaffected by the abiotic and biotic neighbourhood in a Dominican rain forest. Moreover, our rainfall records at Ngel Nyaki do not suggest that seasonal droughts are increasing, although other anthropogenic factors may be altering conditions in the forest in ways that benefit liana seedling survival. For example, cattle grazing is increasing edge effects; Fulani herdsmen drive their cattle into the forest reserve and their trampling opens up canopy cover.</p>
<sec id="S4.SS1">
<title>4.1. Abiotic and biotic factors determining seedling survival</title>
<p>As has been reported elsewhere we found initial seedling height was the most significant factor influencing tree seedling survival. Seedling height has been reported from other tropical permanent forest plots as being an important driver of seedling survival (<xref ref-type="bibr" rid="B19">Comita et al., 2009</xref>; <xref ref-type="bibr" rid="B52">Ma et al., 2014</xref>; <xref ref-type="bibr" rid="B42">Johnson et al., 2017</xref>; <xref ref-type="bibr" rid="B53">Martini et al., 2019</xref>; <xref ref-type="bibr" rid="B40">Jiang et al., 2022</xref>). <xref ref-type="bibr" rid="B40">Jiang et al. (2022)</xref> exploring the mechanisms for this relationship in a temperate forest found seedling functional traits, especially leaf area to be key; larger leaves promoted seedling growth, albeit at a slow rate.</p>
<p>We found conspecific adult neighbours to have a significant negative impact on seedling survival, consistent with the Janzen&#x2013;Connell hypothesis. CNDD mortality has been observed widely in tropical and temperate forests (<xref ref-type="bibr" rid="B18">Comita et al., 2014</xref>; <xref ref-type="bibr" rid="B14">Chen et al., 2018</xref>; <xref ref-type="bibr" rid="B77">Uma&#x00F1;a et al., 2018</xref>; <xref ref-type="bibr" rid="B39">Jia et al., 2020</xref>) and this result suggests that CNDD may play a role in tree community structuring in Ngel Nyaki forest, corroborating part of the findings of an earlier study which incorporated some of the same and some different tree species (<xref ref-type="bibr" rid="B2">Abiem et al., 2021</xref>). A detailed examination of the causes of CNDD in Afromontane forests is yet to be undertaken but <xref ref-type="bibr" rid="B54">Matthesius et al. (2011)</xref>, again in Ngel Nyaki forest, observed increased herbivory of seedlings close to, relative to away from, conspecific adults. Negative effects of conspecific neighbours are often related to the activities of host-specific pathogens and herbivores (<xref ref-type="bibr" rid="B4">Bagchi et al., 2014</xref>).</p>
<p>Of all the abiotic factors sampled only two topographic features, slope and aspect had a significant impact on tree seedling survival. Topography is known to be an important filter of tree species in tropical forests, directly through its influence on climate, light, soil moisture, and soil nutrient content availability (<xref ref-type="bibr" rid="B83">Xia et al., 2016</xref>; <xref ref-type="bibr" rid="B41">Jin et al., 2018</xref>; <xref ref-type="bibr" rid="B68">Song et al., 2018</xref>) and indirectly through its influence on plant&#x2013;plant interactions (<xref ref-type="bibr" rid="B35">Huang et al., 2022</xref>; <xref ref-type="bibr" rid="B58">O&#x2019;Brien and Escudero, 2022</xref>). We found seedling survival to be lower on steeper slopes which is consistent with several other studies (<xref ref-type="bibr" rid="B57">Nagamatsu et al., 2002</xref>; <xref ref-type="bibr" rid="B22">Daws et al., 2005</xref>; <xref ref-type="bibr" rid="B13">Charles et al., 2018</xref>) but in disagreement with <xref ref-type="bibr" rid="B27">Du et al. (2017)</xref> who reported that about 80% of species in a Karst forest in Southwest China were associated with steep slopes. <xref ref-type="bibr" rid="B35">Huang et al. (2022)</xref> also reported higher overall survival rates on slopes than in valley bottoms in Taiwanese subtropical forest. We had expected high seedling survival on steep slopes relative to valleys in our study site because steep slopes are a characteristic feature of many Afromontane forests. However, lower seedling survival on slopes may reflect low water retention, increased water run-off and soil erosion, making it difficult for seedlings to establish. While <xref ref-type="bibr" rid="B22">Daws et al. (2005)</xref> argue that steep slopes may favour the recruitment of small, light seeds because large, heavier seeds are washed downhill, we do not think this applies to Ngel Nyaki forest because we have found no evidence of large-seeded seedlings congregating on valley floors. Moreover, in seasonally dry, semi-deciduous Ngel Nyaki forest (<xref ref-type="bibr" rid="B12">Chapman and Chapman, 2001</xref>) large seeds are easily trapped by litter, understory vegetation and/or tree roots and so may not necessarily be washed downhill.</p>
<p>Aspect strongly filtered seedlings at our study site, with seedling survival and species diversity being significantly higher on south and east, as opposed to north and west facing slopes. While aspect is known to be a significant determinant of vegetation structure in temperate regions (<xref ref-type="bibr" rid="B67">Singh, 2018</xref>), in the tropics it is likely to be most influential in strongly seasonal climates, such as the 6 months wet and 6 months dry season at our study site (<xref ref-type="bibr" rid="B55">M&#x00E9;ndez-Toribio et al., 2017</xref>). At Ngel Nyaki, as across West Africa, the extreme wet and dry seasons are governed by two winds, the rain bearing south-west winds from the Atlantic and the dry, dust, and often ash-filled Harmattan wind blowing southeast from the Sahara (<xref ref-type="bibr" rid="B38">Jenik and Hall, 1966</xref>; <xref ref-type="bibr" rid="B71">Stoorvogel et al., 1997</xref>). The Harmattan is strongest between December and January and must disproportionately impact north facing slopes, causing severe evapotranspiration (<xref ref-type="bibr" rid="B38">Jenik and Hall, 1966</xref>), drying leaf litter on the forest floor and covering leaves in a grey, nutrient rich dust (Hazel Chapman, personal communication). While we have not yet tested for the eco-physiological effects of the Harmattan, based on <xref ref-type="bibr" rid="B38">Jenik and Hall (1966)</xref> who report the ecological effects of the wind on species composition on a nearby massif in Ghana, they are likely to be extreme. The south facing slopes in contrast may receive more rain during the wet season and have more year-round fog than the north facing slopes. The issue of fog contribution to moisture and its distribution across Ngel Nyaki forest remains to be measured and understood.</p>
<p>Census month was also a significant factor in our tree community model. Seedlings which recruited in October, just before the onset of the dry season and Harmattan winds, had significantly lower survival compared to the other months. However, seedlings recruiting toward the middle and end of the dry season January&#x2013;April recorded had a higher probability of surviving than wet season seedling recruits (July). While it would seem intuitive that wet season recruits should have a survival advantage over dry season recruits because of water availability, it may be that the high humidity associated with the wet season favours pathogens and herbivores (<xref ref-type="bibr" rid="B36">Inman-Narahari et al., 2016</xref>; <xref ref-type="bibr" rid="B49">Lin et al., 2017</xref>). Again, further research is needed to fully understand what is driving this result.</p>
</sec>
<sec id="S4.SS2">
<title>4.2. Survival analyses</title>
<p>The results of the Kaplan&#x2013;Meier analyses showed that most newly recruited seedlings persisted for more than a year in Ngel Nyaki forest. Seedlings median survival time was 15 months and about 40% of seedlings are predicted to persist for more than 2 years. Seedling persistence here was higher than that observed by <xref ref-type="bibr" rid="B49">Lin et al. (2017)</xref> in the tropical Karst forest in Taiwan where only 11% of seedlings persisted more than 2 years, but lower than that observed by <xref ref-type="bibr" rid="B24">Delissio et al. (2002)</xref> in the Lambir forest of Malaysia where 50% of the seedlings survived up to 10 years. Understory trees seedlings showed significantly higher persistence compared to the other growth form groups. Understory species usually have fewer seedlings than canopy species and so are less likely to be affected by CNDD, likely explaining <xref ref-type="bibr" rid="B43">King et al. (2006)</xref> observations of higher seedling survival in first-year seedlings of understory relative to canopy tree species.</p>
<p>Unfortunately, because of small numbers we were unable to carry out species-level analyses, which would have allowed us to determine how species vary in their response to abiotic and biotic factors, necessary information for predicting species responses to changing environmental conditions.</p>
<p>Another potential limitation of our study is that it has been conducted over just 27 months (just over 2 years), which raises the concern that our results measure only a snapshot in time. However, we argue that it adequately fulfils its intent which was to examine the role of abiotic and biotic factors on the short-term survival of seedlings in the Ngel Nyaki forest. There were eight repeat censuses, conducted over different seasons of the year for 2 years. An ongoing longer study will provide data to increase confidence in the trends we did see and to allow for species-specific predictions.</p>
</sec>
</sec>
<sec id="S5" sec-type="conclusion">
<title>5. Conclusion</title>
<p>Our analysis of the 3-month survival of 1,145 newly recruited seedlings of 47 woody species in the Ngel Nyaki Permanent Forest Plot provides the first detailed assessment to our knowledge of the role of abiotic and biotic factors in shaping species composition and diversity in an Afromontane forest. Given the significant differences between tropical African montane and lowland forests (<xref ref-type="bibr" rid="B11">Chapman et al., 2016</xref>), we had predicted some differences in the effect of factors on species&#x2019; survival. For example, because of the steep terrain typical of Afromontane forests we hypothesised that seedlings would survive as well or better on steep slopes than in valley bottoms. Instead, our results were consistent with those reported from several other lowland tropical forest studies (<xref ref-type="bibr" rid="B25">Dewalt et al., 2015</xref>; <xref ref-type="bibr" rid="B49">Lin et al., 2017</xref>; <xref ref-type="bibr" rid="B53">Martini et al., 2019</xref>). CNDD, topography and timing of recruitment (recruitment season) most strongly influenced tree seedling survival probability, suggesting that CNDD and niche partitioning are important in shaping species coexistence in West African montane forests. Tree seedlings had a higher probability of surviving on valley bottoms than on steep slopes. In contrast, the abiotic and biotic neighbourhood had no effect on liana seedling survival, and liana seedling appear to be increasing in number relative to tree seedlings, again corroborating results and trends from elsewhere in the tropics (<xref ref-type="bibr" rid="B75">Uma&#x00F1;a et al., 2019</xref>). Future studies will include control experiments with sufficient individual species sample sizes to determine the role of the abiotic and biotic neighbourhood on the survival of individual species. In addition, more specific abiotic factors such as soil water, soil nutrient composition, fog, Harmattan wind dust need to be measured which may make interpretations of relationships observed with proxy variables more robust.</p>
</sec>
<sec id="S6" sec-type="data-availability">
<title>Data availability statement</title>
<p>The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation.</p>
</sec>
<sec id="S7" sec-type="author-contributions">
<title>Author contributions</title>
<p>IA led data collection with support from HC and DK. IA and HC formulated the idea for the manuscript with inputs from DK. IA analysed the data and wrote the initial draft of the manuscript with major comments and edits by HC. All authors contributed to the article and approved the submitted version.</p>
</sec>
</body>
<back>
<sec id="S8" sec-type="funding-information">
<title>Funding</title>
<p>The Ngel Nyaki Forest Dynamics Plot project was primarily funded by an extremely generous donation from Rtd. Gen. T. Y. Danjuma to the Nigerian Montane Forest Project (NMFP), and by a grant from the Smithsonian Institute&#x2019;s Forest Global Earth Observatory (ForestGEO). IA received a ForestGEO research grant (Project ID 341243) for this project. This study was a part of IA&#x2019;s Ph.D. thesis that was funded by the University of Jos NEEDS assessment programme, Nigeria and a grant from the A. G. Leventis Foundation.</p>
</sec>
<ack><p>IA was grateful to Liza Comita, S. Joseph Wright, and Daniel Johnson for providing useful advice on data analyses. We wish to thank the management and staff of NMFP for field work and logistic support. We especially want to thank the forest plot team who have helped with all the censuses since 2016.</p>
</ack>
<sec id="S9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="S10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="S11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/ffgc.2023.1108257/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/ffgc.2023.1108257/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Table_1.docx" id="TS1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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