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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Ecol. Evol.</journal-id>
<journal-title>Frontiers in Ecology and Evolution</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Ecol. Evol.</abbrev-journal-title>
<issn pub-type="epub">2296-701X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fevo.2022.782528</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Ecology and Evolution</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The Diversity in the Genus <italic>Canis</italic> Challenges Conservation Biology: A Review of Available Data on Asian Wolves</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Werhahn</surname> <given-names>Geraldine</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1178817/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Senn</surname> <given-names>Helen</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Macdonald</surname> <given-names>David W.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Sillero-Zubiri</surname> <given-names>Claudio</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/635218/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Wildlife Conservation Research Unit, Department of Zoology, The Recanati-Kaplan Centre, University of Oxford</institution>, <addr-line>Tubney</addr-line>, <country>United Kingdom</country></aff>
<aff id="aff2"><sup>2</sup><institution>International Union for the Conservation of Nature Species Survival Commission (IUCN SSC) Canid Specialist Group</institution>, <addr-line>Oxford</addr-line>, <country>United Kingdom</country></aff>
<aff id="aff3"><sup>3</sup><institution>WildGenes Laboratory, Royal Zoological Society of Scotland</institution>, <addr-line>Edinburgh</addr-line>, <country>United Kingdom</country></aff>
<aff id="aff4"><sup>4</sup><institution>The Born Free Foundation</institution>, <addr-line>Horsham</addr-line>, <country>United Kingdom</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Bilal Habib, Wildlife Institute of India, India</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Spartaco Gippoliti, Storia della Fauna, Italy; Paul Joseph Wilson, Trent University, Canada; Nucharin Songsasen, Smithsonian Conservation Biology Institute (SI), United States</p></fn>
<corresp id="c001">&#x002A;Correspondence: Geraldine Werhahn, <email>geraldine.werhahn@zoo.ox.ac.uk</email></corresp>
<fn fn-type="other" id="fn004"><p>This article was submitted to Conservation and Restoration Ecology, a section of the journal Frontiers in Ecology and Evolution</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>25</day>
<month>04</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>10</volume>
<elocation-id>782528</elocation-id>
<history>
<date date-type="received">
<day>24</day>
<month>09</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>21</day>
<month>03</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2022 Werhahn, Senn, Macdonald and Sillero-Zubiri.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Werhahn, Senn, Macdonald and Sillero-Zubiri</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Taxa belonging to the Genus <italic>Canis</italic> can challenge taxonomists because species boundaries and distribution ranges are often gradual. Species delineation within <italic>Canis</italic> is currently not based on consistent criteria, and is hampered by geographical bias and lack of taxonomic research. But a consistent taxonomy is critical, given its importance for assigning legal protection, conservation priorities, and financial resources. We carried out a qualitative review of the major wolf lineages so far identified from Asia from historical to contemporary time and considered relevant morphological, ecological, and genetic evidence. We present full mitochondrial phylogenies and genetic distances between these lineages. This review aims to summarize the available data on contemporary Asian wolf lineages within the context of the larger phylogenetic <italic>Canis</italic> group and to work toward a taxonomy that is consistent within the Canidae. We found support for the presence and taxon eligibility of Holarctic gray, Himalayan/Tibetan, Indian, and Arabian wolves in Asia and recommend their recognition at the taxonomic levels consistent within the group.</p>
</abstract>
<kwd-group>
<kwd>Arabian wolf</kwd>
<kwd><italic>Canis lupus</italic></kwd>
<kwd><italic>Canis lupus arabs</italic></kwd>
<kwd><italic>Canis lupus chanco</italic></kwd>
<kwd><italic>Canis lupus pallipes</italic></kwd>
<kwd>Himalayan/Tibetan wolf</kwd>
<kwd>Indian wolf</kwd>
<kwd>Mongolian wolf</kwd>
</kwd-group>
<counts>
<fig-count count="2"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="133"/>
<page-count count="15"/>
<word-count count="11935"/>
</counts>
</article-meta>
</front>
<body>
<sec id="S1" sec-type="intro">
<title>Introduction</title>
<p>Canids (Order Carnivora, Family Canidae), like many other mammalian groups, are characterized by gene flow between taxa now and in the evolutionary past (<xref ref-type="bibr" rid="B35">Gopalakrishnan et al., 2018</xref>). Taxonomic delineations in the group are the subject of ongoing change and debate, especially in the wolf-like <italic>Canis</italic> lineages. New phylogenetic studies rapidly and continuously update and challenge our understanding of species and subspecies due to quickly advancing genetic and genomic methods. Hence the total number of 37 species recognized within the family Canidae is a point of some contention (<xref ref-type="bibr" rid="B74">Macdonald and Sillero-Zubiri, 2004</xref>; <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref>; <xref ref-type="bibr" rid="B117">Wang et al., 2004</xref>). Wolves hybridize when circumstances favor (<xref ref-type="bibr" rid="B36">Gottelli et al., 1994</xref>; <xref ref-type="bibr" rid="B1">Adams et al., 2003</xref>; <xref ref-type="bibr" rid="B44">Hennelly et al., 2015</xref>; <xref ref-type="bibr" rid="B87">Pacheco et al., 2017</xref>; <xref ref-type="bibr" rid="B66">Kusak et al., 2018</xref>; <xref ref-type="bibr" rid="B24">Dufresnes et al., 2019</xref>), such as lack of conspecific mates, and they disperse over large distances (<xref ref-type="bibr" rid="B79">Mech et al., 1995</xref>; <xref ref-type="bibr" rid="B33">Geffen et al., 2004</xref>) both of which facilitates gene flow. A re-evaluation of contemporary wolf lineages is thus advisable (<xref ref-type="bibr" rid="B133">Zrzav&#x00FD; and Ricankova, 2004</xref>), especially given the new evidence around wolf lineages in Asia, Africa and North America (<xref ref-type="bibr" rid="B97">Rutledge et al., 2015</xref>; <xref ref-type="bibr" rid="B112">vonHoldt et al., 2016</xref>; <xref ref-type="bibr" rid="B111">Viranta et al., 2017</xref>; <xref ref-type="bibr" rid="B34">Gippoliti and Lupi, 2020</xref>; <xref ref-type="bibr" rid="B123">Werhahn et al., 2020</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>).</p>
<p>Taxonomy, assigning discrete species in a continuous reality (<xref ref-type="bibr" rid="B31">Galtier, 2019</xref>), needs to carefully consider multiple criteria, such as phylogeny and morphology, and be based on consistent taxonomic and nomenclature rules. Taxonomy is heterogeneous at present with regards to the criteria applied for species delineation, and this is particularly sensitive in threatened taxa, where species delineation has immediate consequences on management decisions, conservation, legislation and financing (<xref ref-type="bibr" rid="B31">Galtier, 2019</xref>).</p>
<p>Historically, species designation and their evolutionary placement relied on morphological measurements. A type specimen with respective type locality is named as a reference to describe a particular species and is kept in a recognized scientific museum (<xref ref-type="bibr" rid="B109">Thiel and Wydeven, 2011</xref>). Type specimen and their precise localities are a fundamental tool to assure a stable and accurate taxonomy but have not been consistently used for <italic>Canis</italic> lineages. Today, genetic analysis is augmenting our understanding of species delineation, the relationships among lineages, and phylogenies among species groups.</p>
<p>The debate as to what a species is has moved beyond reproductively isolated lineages, and conservation is gradually recognizing the importance of preserving adaptive potential (e.g., <xref ref-type="bibr" rid="B105">Stanton et al., 2019</xref>) and genetic diversity (<xref ref-type="bibr" rid="B98">Sgr&#x00F2; et al., 2011</xref>; <xref ref-type="bibr" rid="B54">IUCN, 2016</xref>; <xref ref-type="bibr" rid="B10">Biological Convention of Diversity, 2018</xref>; <xref ref-type="bibr" rid="B95">Quilodr&#x00E1;n et al., 2020</xref>). Genetic variation in nature is gradual and differs in extent, but not quality, between species and populations (<xref ref-type="bibr" rid="B47">Hey and Pinho, 2012</xref>). Where experts draw the line between species compared to populations is thus open to different schools of thought.</p>
<p>Recently, a revised taxonomy has become available for the Felidae (<xref ref-type="bibr" rid="B62">Kitchener et al., 2017</xref>), while the reclassification of antelopes by <xref ref-type="bibr" rid="B38">Groves and Grubb (2011)</xref> has sparked a debate on the appropriateness and consistency of taxonomy for conservation (<xref ref-type="bibr" rid="B55">IUCN/SSC Antelope Specialist Group, 2017</xref>).</p>
<p>The Holarctic gray wolf (<italic>Canis lupus</italic>) is comparably well studied in Europe and North America, but studies on wolves from Asia are fewer and the taxonomy of various Asian wolf populations is not clearly established. Further complicating the issue is that the names for some Asian wolf lineages have been used in an inconsistent manner across different studies.</p>
<p>Here we review recent research on contemporary wolf-like <italic>Canis</italic> lineages found in Asia to summarize and clarify the current state of knowledge and inform a re-evaluated taxonomy for the <italic>Canis</italic> genus. Of course, with new studies continuously emerging, any review can only temporarily claim completeness.</p>
<sec id="S1.SS1">
<title>Evolution of the Family Canidae and the Genus <italic>Canis</italic></title>
<p>The Canidae are part of the order Carnivora, a large group of largely predatory mammals. The Canidae comprises three subfamilies, the extant Caninae and two known from fossil specimens only: Hesperocyoninae and Borophaginae. The Caninae evolved in the early Oligocene around 34&#x2013;32 Ma ago, and first members of the tribe Canini appeared in the medial Miocene approximately 11 Ma ago (<xref ref-type="bibr" rid="B117">Wang et al., 2004</xref>; <xref ref-type="bibr" rid="B116">Wang and Tedford, 2008</xref>; <xref ref-type="bibr" rid="B15">Castell&#x00F3;, 2018</xref>).</p>
<p>The Caninae can be divided into four groups: wolf-like canids, red fox-like canids, South American canids, and gray fox-like canids. The wolf-like canids belong in the genus <italic>Canis</italic> (&#x201C;dog&#x201D; in Latin), in the tribe Canini within the Caninae. In Asia today we find the golden jackal <italic>C. aureus</italic> and multiple wolf-like <italic>Canis</italic> lineages (<xref ref-type="fig" rid="F1">Figure 1</xref>). Two of them (the Indian wolf and Himalayan/Tibetan wolf) are considered ancestral to and sharing a common ancestor with the contemporary Holarctic wolves (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B3">Aggarwal et al., 2007</xref>; <xref ref-type="bibr" rid="B122">Werhahn et al., 2017a</xref>,<xref ref-type="bibr" rid="B125">b</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>). Currently these lineages are treated as subspecies of gray wolves <italic>C. lupus</italic> (<xref ref-type="bibr" rid="B15">Castell&#x00F3;, 2018</xref>; <xref ref-type="bibr" rid="B6">&#x00C1;lvares et al., 2019</xref>). Wolf-like canids are characterized by slender bodies with long legs, adapted for chasing prey. They have elongated muzzles with the canid typical dental formula: I 3/3, C1/1, P4/4, M2/3 = 42 (except dholes <italic>Cuon alpinus</italic> which have 40 teeth) (<xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref>). They all have 2n = 78 chromosomes (<xref ref-type="bibr" rid="B120">Wayne et al., 1987</xref>; <xref ref-type="bibr" rid="B118">Wayne, 1993</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Wolf lineages in Asia. Lineages listed in the literature but with little contemporary support are shown in parentheses (see <xref ref-type="table" rid="T1">Table 1</xref>).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fevo-10-782528-g001.tif"/>
</fig>
<p>The gray wolf <italic>C. lupus</italic> appeared in the middle Pleistocene, approximately 0.8&#x2013;0.3 Ma ago in the Arctic North (<xref ref-type="bibr" rid="B110">Vil&#x00E0; et al., 1999</xref>; <xref ref-type="bibr" rid="B106">Tedford et al., 2009</xref>; <xref ref-type="bibr" rid="B103">Sotnikova and Rook, 2010</xref>). During the evolutionary history spanning the ancestors of the wolf-dog clade in the early to middle Pleistocene (<xref ref-type="bibr" rid="B106">Tedford et al., 2009</xref>) to the contemporary Holarctic gray wolf, different lineages such as the Himalayan/Tibetan wolf (<xref ref-type="bibr" rid="B124">Werhahn et al., 2018</xref>; <xref ref-type="bibr" rid="B6">&#x00C1;lvares et al., 2019</xref>), the African wolf (<xref ref-type="bibr" rid="B96">Rueness et al., 2011</xref>), and the Indian gray wolf (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>) diverged as monophyletic sister clades.</p>
</sec>
</sec>
<sec id="S2">
<title>Methods</title>
<p>We reviewed the literature on wolf-like <italic>Canis</italic> lineages in Asia to provide an overview of the latest research and explore taxon eligibility within the context of the larger canid phylogenetic group. A total of 99 papers resulted from systematically searching the available English literature on Google Scholar with the search terms of historical and contemporary <italic>Canis</italic> species&#x2019; scientific names (<xref ref-type="table" rid="T1">Table 1</xref>), and a search for <italic>Canis lupus</italic> + country name (following <xref ref-type="bibr" rid="B84">Newsome et al., 2016</xref>). All relevant studies from 1990 onward where included, but older studies and historical accounts relevant for taxonomy and morphology were also included. Studies were allocated to three categories: morphology, genetics, and ecology/behavior (<xref ref-type="table" rid="T1">Table 1</xref>). Those relevant to taxonomy were examined in detail for the quality of the research, such as sample size, methodology, and findings. See a full list of considered studies in <xref ref-type="supplementary-material" rid="DS1">Supplementary Table S1</xref>.</p>
<table-wrap position="float" id="T1">
<label>TABLE 1</label>
<caption><p>Summary of scientific literature on historical and current wolf lineages discussed for Asia (Also see <xref ref-type="fig" rid="F1">Figure 1</xref>).</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Latin name</td>
<td valign="top" align="left">Distribution region</td>
<td valign="top" align="left">Common name</td>
<td valign="top" align="left">Morphological evidence</td>
<td valign="top" align="left">Genetic evidence</td>
<td valign="top" align="left">Ecological, physiological, or behavioral evidence</td>
<td valign="top" align="left">Additional references</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic><bold>C. l. lupus</bold></italic><break/> Linnaeus, 1758</td>
<td valign="top" align="left">Northern Hemisphere circumpolar</td>
<td valign="top" align="left">Eurasian gray wolf, Holarctic gray wolf, gray wolf</td>
<td valign="top" align="left">Morphometric skull measurements (<xref ref-type="bibr" rid="B86">Nowak, 2003</xref>; <xref ref-type="bibr" rid="B90">Paquet and Carbyn, 2003</xref>; <xref ref-type="bibr" rid="B108">Therrien, 2005</xref>; <xref ref-type="bibr" rid="B128">Wozencraft, 2005</xref>)</td>
<td valign="top" align="left">mtDNA and nDNA<break/> (<xref ref-type="bibr" rid="B78">Mech and Boitani, 2003</xref>; <xref ref-type="bibr" rid="B91">Pilot et al., 2010</xref>; <xref ref-type="bibr" rid="B25">Ersmark et al., 2016</xref>; <xref ref-type="bibr" rid="B35">Gopalakrishnan et al., 2018</xref>)</td>
<td valign="top" align="left">Ecology and behavior of Holarctic gray wolf widely studied (e.g., <xref ref-type="bibr" rid="B78">Mech and Boitani, 2003</xref>)</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B78">Mech and Boitani, 2003</xref>; <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref>; <xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>C. l. albus</italic><break/> Kerr, 1792</td>
<td valign="top" align="left">Eurasian tundra and forest-tundra zones in northern Russia</td>
<td valign="top" align="left">Tundra wolf</td>
<td valign="top" align="left">Morphometric skull measurements (<xref ref-type="bibr" rid="B85">Nowak, 1995</xref>)</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"><xref ref-type="bibr" rid="B93">Pocock, 1935</xref>; <xref ref-type="bibr" rid="B86">Nowak, 2003</xref>; <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>C. l. communis</italic><break/> Dwigubski, 1804</td>
<td valign="top" align="left">Central Russia</td>
<td valign="top" align="left">Russian wolf</td>
<td valign="top" align="left">Morphometric skull measurements (<xref ref-type="bibr" rid="B85">Nowak, 1995</xref>)</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"><xref ref-type="bibr" rid="B86">Nowak, 2003</xref>; <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>C. l. cubanensis</italic><break/> Ognev, 1923</td>
<td valign="top" align="left">East central Asia, Caspian Sea, Caucasus</td>
<td valign="top" align="left">Caucasus wolf, Caspian Sea wolf</td>
<td valign="top" align="left">Morphometric skull measurements (<xref ref-type="bibr" rid="B85">Nowak, 1995</xref>)</td>
<td valign="top" align="left">mtDNA and nDNA<break/> (&#x223C;65 samples)<break/> (<xref ref-type="bibr" rid="B92">Pilot et al., 2014</xref>)</td>
<td valign="top" align="left"/>
<td valign="top" align="left"><xref ref-type="bibr" rid="B86">Nowak, 2003</xref>; <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>C. l. hattai</italic> (extinct)<break/> Kishida, 1931</td>
<td valign="top" align="left">Hokkaido, Japan</td>
<td valign="top" align="left">Ezo wolf</td>
<td valign="top" align="left">Morphometric skull measurements (<xref ref-type="bibr" rid="B86">Nowak, 2003</xref>; <xref ref-type="bibr" rid="B52">Ishiguro et al., 2010</xref>)</td>
<td valign="top" align="left">mtDNA<break/> (2 samples)<break/> (<xref ref-type="bibr" rid="B52">Ishiguro et al., 2010</xref>; <xref ref-type="bibr" rid="B76">Matsumura et al., 2014</xref>; <xref ref-type="bibr" rid="B64">Koblm&#x00FC;ller, 2016</xref>)</td>
<td valign="top" align="left"/>
<td valign="top" align="left"><xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>C. l. hodophilax</italic> (extinct)<break/> Temminck, 1839</td>
<td valign="top" align="left">Honshu, Japan</td>
<td valign="top" align="left">Japanese wolf</td>
<td valign="top" align="left">Morphometric skull measurements (<xref ref-type="bibr" rid="B86">Nowak, 2003</xref>)</td>
<td valign="top" align="left">mtDNA<break/> (8 samples)<break/> (<xref ref-type="bibr" rid="B51">Ishiguro et al., 2009</xref>; <xref ref-type="bibr" rid="B76">Matsumura et al., 2014</xref>; <xref ref-type="bibr" rid="B64">Koblm&#x00FC;ller, 2016</xref>)</td>
<td valign="top" align="left"/>
<td valign="top" align="left"><xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic><bold>C. l. pallipes<xref ref-type="table-fn" rid="t1fns1">&#x002A;</xref></bold></italic> Sykes, 1831</td>
<td valign="top" align="left">Indian subcontinent</td>
<td valign="top" align="left">Indian wolf</td>
<td valign="top" align="left">Morphometric skull measurements (<xref ref-type="bibr" rid="B11">Blanford, 1888</xref>; <xref ref-type="bibr" rid="B81">Mivart, 1890</xref>; <xref ref-type="bibr" rid="B85">Nowak, 1995</xref>)</td>
<td valign="top" align="left">Genomic and mitogenomic evidence<break/> (&#x223C;50 samples)<break/> 0.1% genetic distance on the cyt <italic>b</italic> gene from the Holarctic gray wolf (<xref ref-type="table" rid="T2">Table 2</xref>)<break/> (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B3">Aggarwal et al., 2007</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>)</td>
<td valign="top" align="left">Differentiated vocalization (<xref ref-type="bibr" rid="B45">Hennelly et al., 2017</xref>)</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B93">Pocock, 1935</xref>; <xref ref-type="bibr" rid="B86">Nowak, 2003</xref>; <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref>; <xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic><bold>C. l. chanco</bold></italic><break/> <xref ref-type="bibr" rid="B37">Gray, 1863</xref><break/> Synonyms:<break/> <italic>C. l. laniger</italic><break/> <xref ref-type="bibr" rid="B48">Hodgson, 1847</xref><break/> <italic>C. l. filchneri</italic><break/> Matschie, 1907<break/> <italic>C. l. himalayensis</italic><break/> <xref ref-type="bibr" rid="B4">Aggarwal et al., 2003</xref><break/></td>
<td valign="top" align="left">Contemporary geographic use: Himalayas (India and Nepal); Tibetan Plateau of Qinghai and the Tibetan Autonomous Region (China)<break/> Past geographic: <italic>C. l. chanco</italic> was used for the gray wolf populations in Mongolia and northern China which <bold>do not</bold> belong to the Himalayan wolf lineage.<break/></td>
<td valign="top" align="left">Himalayan wolf<break/> Synonyms: Tibetan wolf, Plateau wolf, Wooly wolf<break/></td>
<td valign="top" align="left">Morphometric measurements of the mandibular coronoid process (<xref ref-type="bibr" rid="B56">Janssens et al., 2016</xref>)</td>
<td valign="top" align="left">Genomic, and mitogenomic evidence (&#x003E; 100 samples)<break/> 3.84% genetic distance on the cyt <italic>b</italic> gene from the Holarctic gray wolf (<xref ref-type="table" rid="T2">Table 2</xref>)<break/> (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B3">Aggarwal et al., 2007</xref>; <xref ref-type="bibr" rid="B69">Li et al., 2011</xref>; <xref ref-type="bibr" rid="B76">Matsumura et al., 2014</xref>; <xref ref-type="bibr" rid="B132">Zhang et al., 2014</xref>; <xref ref-type="bibr" rid="B17">Chetri et al., 2016</xref>; <xref ref-type="bibr" rid="B25">Ersmark et al., 2016</xref>; <xref ref-type="bibr" rid="B26">Fan et al., 2016</xref>; <xref ref-type="bibr" rid="B113">vonHoldt et al., 2017</xref>; <xref ref-type="bibr" rid="B125">Werhahn et al., 2017b</xref>,<xref ref-type="bibr" rid="B124">2018</xref>, <xref ref-type="bibr" rid="B123">2020</xref>; <xref ref-type="bibr" rid="B115">Wang et al., 2020</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>)</td>
<td valign="top" align="left">Differentiated vocalization (<xref ref-type="bibr" rid="B45">Hennelly et al., 2017</xref>); discrete distribution in Asian high-altitude ecosystems above 4,000 m a.s.l. (<xref ref-type="bibr" rid="B123">Werhahn et al., 2020</xref>)<break/> Differentiated gene expression in 90 genes (<xref ref-type="bibr" rid="B71">Liu et al., 2019</xref>)</td>
<td valign="top" align="left"><xref ref-type="bibr" rid="B93">Pocock, 1935</xref>; <xref ref-type="bibr" rid="B18">CITES, 2017</xref>; <xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref>; <xref ref-type="bibr" rid="B6">&#x00C1;lvares et al., 2019</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>C. l. campestris</italic> Dwigubski, 1804<break/> Synonyms:<break/> <italic>C. l. chanco</italic><break/> <xref ref-type="bibr" rid="B37">Gray, 1863</xref><break/> (but see Himalayan wolf)<break/> <italic>C. l. desertorum</italic><break/> <xref ref-type="bibr" rid="B93">Pocock, 1935</xref> (used as synonym for <italic>campestris</italic> by <xref ref-type="bibr" rid="B77">Mech, 1974</xref>)</td>
<td valign="top" align="left">Lowlands north of the Tibetan Plateau, i.e., Inner Mongolia and Mongolia<break/></td>
<td valign="top" align="left">Mongolian wolf</td>
<td valign="top" align="left"/>
<td valign="top" align="left">mtDNA evidence<break/> (1 sample)<break/> <xref ref-type="bibr" rid="B131">Zhang et al. (2013b)</xref> provides full mtDNA of one animal (used in <xref ref-type="fig" rid="F2">Figure 2</xref>), but no phylogenetic research</td>
<td valign="top" align="left"/>
<td valign="top" align="left"><xref ref-type="bibr" rid="B131">Zhang et al., 2013b</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>C. l. desertorum</italic> <xref ref-type="bibr" rid="B93">Pocock, 1935</xref><break/></td>
<td valign="top" align="left">Xinjiang</td>
<td valign="top" align="left">Chinese Shinjang wolf, Steppe wolf</td>
<td valign="top" align="left"/>
<td valign="top" align="left">mtDNA evidence<break/> (1 sample)<break/> <xref ref-type="bibr" rid="B130">Zhang et al. (2013a)</xref> provides full mtDNA of one animal (used in <xref ref-type="fig" rid="F2">Figure 2</xref>) but no phylogenetic research</td>
<td valign="top" align="left"/>
<td valign="top" align="left"><xref ref-type="bibr" rid="B130">Zhang et al., 2013a</xref>; <xref ref-type="bibr" rid="B114">Wang et al., 2016</xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic><bold>C. l. arabs<xref ref-type="table-fn" rid="t1fns1">&#x002A;</xref></bold></italic><break/> <xref ref-type="bibr" rid="B93">Pocock, 1935</xref></td>
<td valign="top" align="left">Arabian Peninsula</td>
<td valign="top" align="left">Arabian wolf</td>
<td valign="top" align="left">Morphometric skull measurements (<xref ref-type="bibr" rid="B86">Nowak, 2003</xref>)</td>
<td valign="top" align="left">mtDNA evidence<break/> (&#x003E; 100 samples)<break/> 0.43% genetic distance on the cyt <italic>b</italic> gene from the Holarctic gray wolf (<xref ref-type="table" rid="T2">Table 2</xref>)<break/> (<xref ref-type="bibr" rid="B14">Bray et al., 2014</xref>)</td>
<td valign="top" align="left"/>
<td valign="top" align="left"><xref ref-type="bibr" rid="B93">Pocock, 1935</xref>; <xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref></td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="t1fns1"><p><italic>The studies are attributed to three types of evidence: morphological, genetic, and ecological. Morphological evidence refers to studies based on skull measurements, genetic evidence includes mitochondrial and nuclear genetic studies, and ecological evidence includes studies that reveal distinct behavior and/or ecological adaptations. Contemporary lineages that seem well supported by evidence as phylogenetically distinct are marked in bold. Lineages marked with &#x002A; are recognized in the IUCN Red List assessment for Canis lupus (<xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref>). (Please note that <xref ref-type="bibr" rid="B93">Pocock, 1935</xref> lists in addition C. l. altaicus, and C. l. dybovskii, but these subspecies find no support in recent literature or research).</italic></p></fn>
</table-wrap-foot>
</table-wrap>
<p>We conducted a genetic distance analysis based on full mtDNA and the cytochrome <italic>b</italic> gene only (because it is often used in phylogenetic studies) in the software MEGA (<xref ref-type="bibr" rid="B65">Kumar et al., 2018</xref>) for the considered lineages. We built a Bayesian phylogeny based on full mtDNA (<xref ref-type="bibr" rid="B50">Huelsenbeck and Ronquist, 2001</xref>) in Geneious Version 2019.1.1 with the package MrBayes to complement the findings gleaned from the literature and further investigate taxon eligibility.</p>
</sec>
<sec id="S3">
<title>Wolf Lineages of Asia</title>
<sec id="S3.SS1">
<title>Holarctic Gray Wolf (<italic>Canis lupus</italic>)</title>
<p>Once the most widely distributed terrestrial mammal, found across the entire northern hemisphere north of 13&#x2013;20&#x00B0; latitude, its range has been drastically cut back over the centuries due to human persecution (<xref ref-type="bibr" rid="B78">Mech and Boitani, 2003</xref>). Based on its wide distribution, large and stable populations the Holarctic gray wolf is listed as Least Concern by the IUCN Red List (<xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref>). As many as 38 <italic>C. lupus</italic> subspecies have been reported (<xref ref-type="bibr" rid="B128">Wozencraft, 2005</xref>), but only 10 are recognized by the IUCN today, five in North America and five in Eurasia (<xref ref-type="table" rid="T1">Table 1</xref>; <xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref>). Previous taxonomic revision was done by <xref ref-type="bibr" rid="B93">Pocock (1935)</xref> that recognized nine Asian subspecies. <xref ref-type="bibr" rid="B86">Nowak (2003)</xref> in his last taxonomic account of <italic>Canis lupus</italic> accepted eight Asian subspecies.</p>
<p><italic>C. lupus</italic> occupies large parts of Europe, with <italic>C. l. signatus</italic> (<xref ref-type="bibr" rid="B72">Loog et al., 2020</xref>) found in the Iberian peninsula and <italic>C. l. italicus</italic> (<xref ref-type="bibr" rid="B5">Altobello, 1921</xref>) in Italy, France and Switzerland (<xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref>). <italic>C. lupus</italic> dominates Asia according to <xref ref-type="bibr" rid="B12">Boitani et al. (2018)</xref> from Mongolia across China and the Himalayan Mountains, and <italic>C. l. chanco</italic>, the Himalayan wolf, is mentioned as proposed for the Himalayan range. Also recognized are <italic>C. l. pallipes</italic> for the Indian subcontinent and <italic>C. l. arabs</italic> for the Arabian peninsula. <xref ref-type="bibr" rid="B91">Pilot et al. (2010)</xref> found that, except for Indian and Himalayan wolf lineages, contemporary worldwide gray wolves show little evolutionary significant diversification in terms of monophyletic clades with allopatric distributions. Wolves are highly mobile predators, with dispersal distances reaching over 1,000 km (<xref ref-type="bibr" rid="B79">Mech et al., 1995</xref>; <xref ref-type="bibr" rid="B33">Geffen et al., 2004</xref>; <xref ref-type="bibr" rid="B19">Ciucci et al., 2009</xref>). Consequently, during interglacial periods, wolf populations could rapidly expand into favorable habitats leading to population admixture that obscured past phylogeographic structure caused by Ice Age isolation (<xref ref-type="bibr" rid="B110">Vil&#x00E0; et al., 1999</xref>).</p>
<p>A dramatic population decline of gray wolves beginning at least &#x223C;30,000 years ago and a rather recent common ancestry of extant gray wolves, suggest that wolves existing before that time were phylogenetically distinct (<xref ref-type="bibr" rid="B67">Leonard et al., 2007</xref>; <xref ref-type="bibr" rid="B107">Thalmann et al., 2013</xref>; <xref ref-type="bibr" rid="B30">Freedman et al., 2014</xref>; <xref ref-type="bibr" rid="B26">Fan et al., 2016</xref>). Recent work further suggests that contemporary Holarctic gray wolves originated from a Beringian wolf population expansion that took place at the end of the Last Glacial Maximum (between 26,500&#x2013;19,000 years ago), with the expansion driven by the considerable ecological changes of the time (<xref ref-type="bibr" rid="B63">Koblm&#x00FC;ller et al., 2009</xref>; <xref ref-type="bibr" rid="B25">Ersmark et al., 2016</xref>; <xref ref-type="bibr" rid="B72">Loog et al., 2020</xref>). Within the Holarctic gray wolf complex, the highest diversity is found in wolves from Europe, China, and Russia (<xref ref-type="bibr" rid="B25">Ersmark et al., 2016</xref>).</p>
<p>Focusing on Asia, <xref ref-type="bibr" rid="B114">Wang et al. (2016)</xref> described five wolf taxa for China, but the supporting evidence is scarce: <italic>C. l. chanco, C. l. filchneri</italic>, and <italic>C. l. desertorum</italic> (in <xref ref-type="table" rid="T1">Table 1</xref> listed according to their contemporary use), <italic>C</italic>. <italic>l</italic>. Nei-Mongol form in Inner Mongolia (western and mid part) and <italic>C</italic>. <italic>l</italic>. South-China form in Anhui, Jiangsu, Zhejiang, Jiangxi, Fujian, Guangdong, Hunan, Guizhou, Yunnan, Hubei and Sichuan.</p>
<p>In common with other recent authors, we found evidence for the presence of two distinct wolf lineages in China, the Holarctic gray wolf <italic>C. l. lupus</italic> and the Himalayan wolf <italic>C. l. chanco</italic>, with the latter found in the high altitudes of western China (see <xref ref-type="table" rid="T1">Tables 1</xref>, <xref ref-type="table" rid="T2">2</xref>; <xref ref-type="bibr" rid="B76">Matsumura et al., 2014</xref>; <xref ref-type="bibr" rid="B132">Zhang et al., 2014</xref>; <xref ref-type="bibr" rid="B26">Fan et al., 2016</xref>; <xref ref-type="bibr" rid="B124">Werhahn et al., 2018</xref>, <xref ref-type="bibr" rid="B123">2020</xref>; <xref ref-type="bibr" rid="B115">Wang et al., 2020</xref>). Below, we take a closer look at historical and contemporary wolf lineages considered for Asia.</p>
<table-wrap position="float" id="T2">
<label>TABLE 2</label>
<caption><p>Net genetic distance in% based on the complete mtDNA and only the cytochrome <italic>b</italic> (cyt <italic>b</italic>) gene as calculated with MEGA.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="center" colspan="2">Holarctic<break/> gray wolf</td>
<td valign="top" align="center" colspan="2">African wolf</td>
<td valign="top" align="center" colspan="2">Himalayan wolf</td>
<td valign="top" align="center" colspan="2">Gray wolf Iran</td>
<td valign="top" align="center" colspan="2">Gray wolf Mongolia</td>
<td valign="top" align="center" colspan="2">Indian wolf</td>
<td valign="top" align="left" colspan="2">Gray wolf<break/> Xinjiang (China)</td>
<td valign="top" align="center" colspan="2">Iberian wolf</td>
</tr>
<tr>
<td valign="top" align="left"></td>
<td valign="top" align="center" colspan="2"><hr/></td>
<td valign="top" align="center" colspan="2"><hr/></td>
<td valign="top" align="center" colspan="2"><hr/></td>
<td valign="top" align="center" colspan="2"><hr/></td>
<td valign="top" align="center" colspan="2"><hr/></td>
<td valign="top" align="center" colspan="2"><hr/></td>
<td valign="top" align="left" colspan="2"><hr/></td>
<td valign="top" align="center" colspan="2"><hr/></td>
</tr>
<tr>
<td valign="top" align="left"/>
<td valign="top" align="left">mtDNA</td>
<td valign="top" align="center">cyt <italic>b</italic></td>
<td valign="top" align="center">mtDNA</td>
<td valign="top" align="center">cyt <italic>b</italic></td>
<td valign="top" align="center">mtDNA</td>
<td valign="top" align="center">cyt <italic>b</italic></td>
<td valign="top" align="center">mtDNA</td>
<td valign="top" align="center">cyt <italic>b</italic></td>
<td valign="top" align="center">mtDNA</td>
<td valign="top" align="center">cyt <italic>b</italic></td>
<td valign="top" align="center">mtDNA</td>
<td valign="top" align="center">cyt <italic>b</italic></td>
<td valign="top" align="center">mtDNA</td>
<td valign="top" align="center">cyt <italic>b</italic></td>
<td valign="top" align="center">mtDNA</td>
<td valign="top" align="center">cyt <italic>b</italic></td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><bold>Holarctic</bold><break/> <bold>gray wolf</bold> (<italic>N</italic> = 9)</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"><bold>Coyote</bold> (<italic>N</italic> = 2)</td>
<td valign="top" align="center">4.15</td>
<td valign="top" align="center">6.60</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"><bold>African wolf</bold> (<italic>N</italic> = 3)</td>
<td valign="top" align="center">2.55</td>
<td valign="top" align="center">3.11</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"><bold>Himalayan wolf</bold> (<italic>N</italic> = 4)</td>
<td valign="top" align="center">2.45</td>
<td valign="top" align="center">3.84</td>
<td valign="top" align="center">2.59</td>
<td valign="top" align="center">2.48</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"><bold>Gray wolf Iran</bold> (<italic>N</italic> = 2)</td>
<td valign="top" align="center">0.29</td>
<td valign="top" align="center">0.45</td>
<td valign="top" align="center">2.78</td>
<td valign="top" align="center">3.60</td>
<td valign="top" align="center">2.71</td>
<td valign="top" align="center">4.31</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"><bold>Gray wolf Mongolia</bold> (<italic>N</italic> = 8)</td>
<td valign="top" align="center">0.04</td>
<td valign="top" align="center">0.09</td>
<td valign="top" align="center">2.58</td>
<td valign="top" align="center">3.19</td>
<td valign="top" align="center">2.56</td>
<td valign="top" align="center">4.10</td>
<td valign="top" align="center">0.31</td>
<td valign="top" align="center">0.52</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"><bold>Indian wolf</bold> (<italic>N</italic> = 1)</td>
<td valign="top" align="center">1.17</td>
<td valign="top" align="center">1.36</td>
<td valign="top" align="center">259</td>
<td valign="top" align="center">2.85</td>
<td valign="top" align="center">2.84</td>
<td valign="top" align="center">3.73</td>
<td valign="top" align="center">1.38</td>
<td valign="top" align="center">1.60</td>
<td valign="top" align="center">1.22</td>
<td valign="top" align="center">0.14</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"><bold>Gray wolf Xinjiang (China)</bold> (<italic>N</italic> = 2)</td>
<td valign="top" align="center">0.06</td>
<td valign="top" align="center">-0.02</td>
<td valign="top" align="center">2.61</td>
<td valign="top" align="center">2.95</td>
<td valign="top" align="center">2.61</td>
<td valign="top" align="center">3.94</td>
<td valign="top" align="center">0.38</td>
<td valign="top" align="center">0.44</td>
<td valign="top" align="center">0.04</td>
<td valign="top" align="center">0.05</td>
<td valign="top" align="center">1.31</td>
<td valign="top" align="center">1.34</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"><bold>Iberian wolf</bold> (<italic>N</italic> = 1)</td>
<td valign="top" align="center">0.20</td>
<td valign="top" align="center">0.20</td>
<td valign="top" align="center">2.76</td>
<td valign="top" align="center">3.22</td>
<td valign="top" align="center">2.71</td>
<td valign="top" align="center">3.93</td>
<td valign="top" align="center">0.51</td>
<td valign="top" align="center">0.71</td>
<td valign="top" align="center">0.18</td>
<td valign="top" align="center">0.32</td>
<td valign="top" align="center">1.37</td>
<td valign="top" align="center">1.61</td>
<td valign="top" align="center">0.20</td>
<td valign="top" align="center">0.18</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"><bold>Gray wolf Arabia</bold> (<italic>N</italic> = 1)</td>
<td valign="top" align="center">0.33</td>
<td valign="top" align="center">0.53</td>
<td valign="top" align="center">2.82</td>
<td valign="top" align="center">3.70</td>
<td valign="top" align="center">2.81</td>
<td valign="top" align="center">4.40</td>
<td valign="top" align="center">0.06</td>
<td valign="top" align="center">0.08</td>
<td valign="top" align="center">0.32</td>
<td valign="top" align="center">0.52</td>
<td valign="top" align="center">1.47</td>
<td valign="top" align="center">1.69</td>
<td valign="top" align="center">0.45</td>
<td valign="top" align="center">0.53</td>
<td valign="top" align="center">0.53</td>
<td valign="top" align="center">0.79</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn><p><italic>The coyote, African wolf, and Iberian wolf are included as comparison of a recognized species, a recently newly described species and gray wolf subspecies, respectively. The first two columns show the genetic distance between the Holarctic gray wolf and considered lineages.</italic></p></fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="S3.SS2">
<title>Eurasian Wolf <italic>C. l. lupus</italic></title>
<p>Listed in <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al. (2004)</xref> but not specifically mentioned in <xref ref-type="bibr" rid="B12">Boitani et al. (2018)</xref>. Recognized by <xref ref-type="bibr" rid="B85">Nowak (1995)</xref> based on skull morphology. The type location is reported as Sweden (<xref ref-type="bibr" rid="B93">Pocock, 1935</xref>). This nominate subspecies of <italic>Canis lupus</italic> is found in large parts of Eurasia, including northern Europe, Russia, Mongolia, Kyrgyzstan, Kazakhstan, and the lowlands of northwestern China (<xref ref-type="bibr" rid="B15">Castell&#x00F3;, 2018</xref>).</p>
</sec>
<sec id="S3.SS3">
<title>Tundra Wolf <italic>C. l. albus</italic></title>
<p>Listed by <xref ref-type="bibr" rid="B93">Pocock (1935)</xref> and <xref ref-type="bibr" rid="B85">Nowak (1995</xref>, <xref ref-type="bibr" rid="B86">2003)</xref> for northern Russia based on skull morphology and pelage. Listed in <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al. (2004)</xref> but not included in <xref ref-type="bibr" rid="B12">Boitani et al. (2018)</xref>. Type locality was Jenisea in the east of former USSR (<xref ref-type="bibr" rid="B93">Pocock, 1935</xref>; <xref ref-type="bibr" rid="B77">Mech, 1974</xref>). We found no further supporting evidence for the taxon.</p>
</sec>
<sec id="S3.SS4">
<title>Russian Wolf <italic>C. l. communis</italic></title>
<p>Recognized by <xref ref-type="bibr" rid="B85">Nowak (1995)</xref> based on skull morphology and listed in <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al. (2004)</xref> but not included in <xref ref-type="bibr" rid="B12">Boitani et al. (2018)</xref>. <xref ref-type="bibr" rid="B86">Nowak (2003)</xref> reports the subspecies to be known from the Ural Mountain region of north-central Russia. We found no further supporting evidence for the taxon.</p>
</sec>
<sec id="S3.SS5">
<title>Caucasus Wolf <italic>C. l. cubanensis</italic></title>
<p>Recognized by <xref ref-type="bibr" rid="B85">Nowak (1995)</xref> based on skull morphology and listed by <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al. (2004)</xref> but not included in <xref ref-type="bibr" rid="B12">Boitani et al. (2018)</xref>. The Caucasus wolf is found in the geographic boundaries between Europe and Asia. <xref ref-type="bibr" rid="B92">Pilot et al. (2014)</xref> investigated the genetic distinctness of Caucasus wolves and concluded that they were genetically connected with Eurasian wolf populations and shared the same demographic trends. The Caucasus region wolves shared mtDNA haplotypes with both Eastern European and West Asian wolves, suggesting past or ongoing gene flow. The study is based on 65 invasive and non-invasive samples analyzed for 660 bp of mtDNA control region and 14 microsatellite loci, as well as four individuals analyzed for 167,989 autosomal genome-wide SNPs (<xref ref-type="bibr" rid="B92">Pilot et al., 2014</xref>). We found no other supporting evidence for the taxon.</p>
</sec>
<sec id="S3.SS6">
<title>Japanese or Honsu Wolf (<italic>C. l. hodophilax</italic>, Extinct) and Ezo Wolf <italic>[C. l. hattai</italic> = <italic>C. l. rex</italic> (<xref ref-type="bibr" rid="B93">Pocock, 1935</xref>), Extinct]</title>
<p><xref ref-type="bibr" rid="B86">Nowak (2003)</xref> recognized the morphological distinctness of two wolf lineages, that were historically found in Japan but extinct since approximately 100&#x2013;120 years ago. The type locality for <italic>C. l. hodophilax</italic> is reported as Hondo, Japan (<xref ref-type="bibr" rid="B93">Pocock, 1935</xref>) and for <italic>C. l. hattai</italic> it is Sapporo, Hokkaido, Japan (<xref ref-type="bibr" rid="B77">Mech, 1974</xref>).</p>
<p>The Japanese wolf is believed to have colonized the Japanese archipelago in the Late Pleistocene (ca. 25,000&#x2013;125,000 years ago). The Ezo wolf arrived in Japan later, i.e., &#x003C; 14,000 years ago (<xref ref-type="bibr" rid="B52">Ishiguro et al., 2010</xref>, <xref ref-type="bibr" rid="B51">2009</xref>; <xref ref-type="bibr" rid="B76">Matsumura et al., 2014</xref>). <xref ref-type="bibr" rid="B51">Ishiguro et al. (2009)</xref> analyzed eight samples of the Japanese wolf for &#x223C;590 bp of the mtDNA control region and found that the wolf specimens were closely related and grouped in one lineage with an 88% bootstrap support in a neighbor-joining analysis.</p>
<p>Two Ezo wolf samples were analyzed for &#x223C;600 bp of the mtDNA control region and found to be identical to the gray wolf mtDNA of Canadian wolf samples. The authors also assessed morphological data from four specimen and found that the Ezo wolf is larger than the Japanese wolf and similar in size to the gray wolf of the American and Asian continents (<xref ref-type="bibr" rid="B52">Ishiguro et al., 2010</xref>).</p>
</sec>
<sec id="S3.SS7">
<title>Indian Wolf <italic>C. l. pallipes</italic> (Synonym: <italic>C. indica</italic>)</title>
<p>The Indian wolf is characteristic to the arid and semi-arid lowlands of the Indian subcontinent and recognized as a gray wolf subspecies by the IUCN Red List in <xref ref-type="bibr" rid="B12">Boitani et al. (2018)</xref>. Its population size in India was estimated at 2,000&#x2013;3,000 individuals (<xref ref-type="bibr" rid="B58">Jhala, 2003</xref>). Its type locality is reported as Deccan, India (<xref ref-type="bibr" rid="B93">Pocock, 1935</xref>).</p>
<p>The Indian wolf shows divergent mtDNA haplotypes, mitogenomes, and evolutionary distinct genomes forming a monophyletic lineage basal to the Holarctic gray wolf complex (<xref ref-type="fig" rid="F2">Figure 2</xref>; <xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B3">Aggarwal et al., 2007</xref>; <xref ref-type="bibr" rid="B91">Pilot et al., 2010</xref>; <xref ref-type="bibr" rid="B26">Fan et al., 2016</xref>; <xref ref-type="bibr" rid="B125">Werhahn et al., 2017b</xref>; <xref ref-type="bibr" rid="B72">Loog et al., 2020</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>). <xref ref-type="bibr" rid="B3">Aggarwal et al. (2007)</xref> analyzed five samples for D-loop mtDNA (1,140 bp) and 16S rRNA gene (560 bp), and two samples for cytochrome <italic>b</italic> (1,300 bp). <xref ref-type="bibr" rid="B25">Ersmark et al. (2016)</xref> used the samples by <xref ref-type="bibr" rid="B99">Sharma et al. (2004)</xref>, and <xref ref-type="bibr" rid="B3">Aggarwal et al. (2007)</xref> and thereby analyzed 45 samples for 440 bp mtDNA control region. <xref ref-type="bibr" rid="B43">Hennelly et al. (2021)</xref> analyzed four genomes of Indian wolf and found the Indian wolf to be basal to the Holarctic gray wolf in accordance with the mitochondrial phylogeny. The authors conclude that southern regions of Asia may have been important centers for canid evolution and that both the Tibetan/Himalayan wolf and the Indian wolf present evolutionary significant units (ESU) (<xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Bayesian phylogeny based on the full mitochondrial genome with GenBank accession numbers (modified from Figure 2 in <xref ref-type="bibr" rid="B123">Werhahn et al., 2020</xref>). The Indian wolf (blue), Arabian wolf (orange, but note <italic>N</italic> = 1 only allows preliminary inference), and Himalayan wolf (green) are monophyletic, whereas wolf samples from the Mongolia and Inner Mongolia region (yellow) are polyphyletic. This phylogeny indicates that, (1) the Indian and Himalayan wolf form a clade basal to the Holarctic gray wolf thus taxon recognition is supported, and (2) wolves in Mongolia do not form a monophyletic clade and thus subspecies recognition is not supported.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fevo-10-782528-g002.tif"/>
</fig>
<p>Estimated divergence times for the Indian wolf range between 0.27 and 0.4 Ma ago based on molecular clock analysis of mitochondrial DNA (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B3">Aggarwal et al., 2007</xref>). <xref ref-type="bibr" rid="B43">Hennelly et al. (2021)</xref> report a most recent common ancestor between the Holarctic wolf and the Indian wolf at 0.2 Ma (95% HPD: 0.175&#x2013;0.307) based on a third-codon position tree.</p>
<p>Phylogenetic analysis supports the taxonomic recognition of <italic>C. l. pallipes</italic> which forms an evolutionary divergent and ancestral lineage of gray wolves, endemic to Asia (<xref ref-type="bibr" rid="B25">Ersmark et al., 2016</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>; <xref ref-type="fig" rid="F2">Figure 2</xref>). Genetic distance values for the Indian wolf to the Holarctic gray wolf are a decimal range higher than that of the recognized subspecies of the Iberian and Arabian wolf to the Holarctic gray wolf (<xref ref-type="table" rid="T2">Table 2</xref>). Thus taxonomic level may be reconsidered with regards to species level recognition in consistency with the recent taxonomic recognition of the African wolf <italic>Canis lupaster</italic> (<xref ref-type="bibr" rid="B49">Hoffman and Atickem, 2019</xref>) and considering recent genomic evidence placing the Indian wolf basal to contemporary Holarctic wolves <italic>C. lupus</italic> (<xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>).</p>
<p>A note on wolves westwards of Pakistan:</p>
<p>Formerly the Indian wolf lineage was also reported from the middle East and southwest Asia to the Indian subcontinent (<xref ref-type="bibr" rid="B85">Nowak, 1995</xref>; <xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref>; <xref ref-type="bibr" rid="B15">Castell&#x00F3;, 2018</xref>) but recent research suggests that wolves in Waziristan of Pakistan and westwards (e.g., Afghanistan, Iran, Irak Israel, and Turkey) genetically group with the Eurasian gray wolf clade (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B14">Bray et al., 2014</xref>; <xref ref-type="bibr" rid="B25">Ersmark et al., 2016</xref>; <xref ref-type="bibr" rid="B40">Hamid et al., 2019</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>). The full mitochondrial phylogeny in <xref ref-type="fig" rid="F2">Figure 2</xref> indicates that the Iranian wolf sample does not cluster with the Indian wolf (but note the low sample sizes). <xref ref-type="bibr" rid="B60">Khosravi et al. (2012)</xref> showed minor morphological variations of the skull of Iranian wolves but they do not provide morphological support for a different wolf subspecies in the region; the genetic lineage was not verified. The genetic distance analysis (<xref ref-type="table" rid="T2">Table 2</xref>) and phylogeny (<xref ref-type="fig" rid="F2">Figure 2</xref>) included only two wolf samples from Iran but suggest that these wolf populations would merit further in-depth genetic studies as they neither cluster with Arabian nor Indian wolves and might be diversified.</p>
</sec>
<sec id="S3.SS8">
<title>Arabian Wolf <italic>C. l. arabs</italic></title>
<p><xref ref-type="bibr" rid="B86">Nowak (2003)</xref> recognized the morphological distinctness of a desert-adapted wolf found in the Arabian peninsula (<xref ref-type="bibr" rid="B93">Pocock, 1935</xref>; <xref ref-type="bibr" rid="B42">Hefner and Geffen, 1999</xref>). The Arabian wolf is recognized as a <italic>C. lupus</italic> subspecies by the IUCN Red List in <xref ref-type="bibr" rid="B12">Boitani et al. (2018)</xref>. The type locality for <italic>C. l. arabs</italic> is in Ain in S.E. Arabia (<xref ref-type="bibr" rid="B77">Mech, 1974</xref>). They are usually grayish beige in color but melanistic individuals are frequent (<xref ref-type="bibr" rid="B53">Islam et al., 2019</xref>). The Arabian wolf is genetically distinct from the Indian wolf and more closely associated to the European wolf (<xref ref-type="bibr" rid="B14">Bray et al., 2014</xref>). <xref ref-type="bibr" rid="B14">Bray et al. (2014)</xref> analyzed 15 blood samples of captive animals and 88 tissue samples of road kills for mitochondrial DNA, specifically &#x223C;400&#x2013;800 bp of the cytochrome <italic>b</italic> gene region and a &#x223C; 300 bp fragment of the control region.</p>
<p>Formerly, but not conforming with the recent genetic evidence on distribution range, <italic>C. l. pallipes</italic> was used to describe wolves in Arabia and Iran (e.g., <xref ref-type="bibr" rid="B129">Wronski and Macasero, 2008</xref>; <xref ref-type="bibr" rid="B61">Khosravi et al., 2013</xref>). Genetic distance analysis (<xref ref-type="table" rid="T2">Table 2</xref>) and phylogeny (<xref ref-type="fig" rid="F2">Figure 2</xref>, albeit including only one Arabian wolf sample) supported subspecies status, with genetic distance values in the same decimal range as the other recognized gray wolf subspecies.</p>
</sec>
<sec id="S3.SS9">
<title>Mongolian Wolf</title>
<p>The Mongolian wolf is not included in recent literature (<xref ref-type="bibr" rid="B101">Sillero-Zubiri et al., 2004</xref>; <xref ref-type="bibr" rid="B128">Wozencraft, 2005</xref>; <xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref>), and is currently considered as <italic>C. lupus</italic>. However, the wolves of Mongolia have been treated as a different gray wolf subspecies in some literature (<xref ref-type="bibr" rid="B93">Pocock, 1935</xref>; <xref ref-type="bibr" rid="B126">Wilson and Reeder, 2005</xref>) and databases such as NCBI GenBank.</p>
<p>The Mongolian wolf, i.e., the wolf populations in Mongolia and in the geographically close Inner Mongolia and Xinjiang provinces of China, genetically group within the Holarctic gray wolf complex based on full mtDNA analysis (<xref ref-type="fig" rid="F2">Figure 2</xref> and <xref ref-type="table" rid="T2">Table 2</xref>) but are polyphyletic and only show a shallow diversification (<xref ref-type="fig" rid="F2">Figure 2</xref>). The wolves of Mongolia and Inner Mongolia present little diversified polyphyletic clades within the Holarctic gray wolf complex (<xref ref-type="bibr" rid="B132">Zhang et al., 2014</xref>; <xref ref-type="bibr" rid="B26">Fan et al., 2016</xref>; <xref ref-type="bibr" rid="B125">Werhahn et al., 2017b</xref>). <xref ref-type="bibr" rid="B93">Pocock (1935)</xref> provides cranial measurements of wolves from the general region indicating only gradual differences (but with uncertainty regarding the genetic lineages sampled). Taxonomic recognition for wolves in the Mongolian region seems not supported by the evidence (also consider <xref ref-type="fig" rid="F2">Figure 2</xref>) in line with dropping of the subspecies in the latest IUCN Red List assessment for <italic>C. lupus</italic> (<xref ref-type="bibr" rid="B12">Boitani et al., 2018</xref>).</p>
<p>The naming of the lowland Mongolian wolf, historically often called <italic>C. l. chanco</italic>, has been ambiguous, as <italic>C. l. chanco</italic> has also been used to describe a different wolf lineage, namely that of the high altitudes on the Tibetan plateau and the Himalayas, the so called Himalayan or Tibetan wolf. Recently <xref ref-type="bibr" rid="B6">&#x00C1;lvares et al. (2019)</xref> recommended that <italic>C. l. chanco</italic> should be used exclusively for the Himalayan wolf of the Asian high-altitudes, which forms a distinct clade basal to the Holarctic gray wolf complex (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B3">Aggarwal et al., 2007</xref>; <xref ref-type="bibr" rid="B125">Werhahn et al., 2017b</xref>,<xref ref-type="bibr" rid="B124">2018</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>).</p>
</sec>
<sec id="S3.SS10">
<title>Himalayan/Tibetan Wolf (<italic>C. l. chanco;</italic> Synonym<italic>: C. laniger, C. filchneri, C. himalayensis</italic>)</title>
<p>The Himalayan wolf, also referred to as Tibetan wolf, is mentioned as a proposed <italic>C. lupus</italic> subspecies in <xref ref-type="bibr" rid="B12">Boitani et al. (2018)</xref>. Studies indicate that this is a phylogenetically distinct wolf clade characteristic to the Asian high-altitudes (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B3">Aggarwal et al., 2007</xref>; <xref ref-type="bibr" rid="B100">Shrotryia et al., 2012</xref>; <xref ref-type="bibr" rid="B125">Werhahn et al., 2017b</xref>,<xref ref-type="bibr" rid="B124">2018</xref>, <xref ref-type="bibr" rid="B123">2020</xref>; <xref ref-type="bibr" rid="B6">&#x00C1;lvares et al., 2019</xref>; <xref ref-type="bibr" rid="B72">Loog et al., 2020</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>; also see <xref ref-type="bibr" rid="B59">Joshi et al., 2020</xref> but note that the data does not support the Himalayan/Tibetan wolf lineage to be found in lowland Mongolia). The Himalayan wolf is found in habitats above 4,000 m elevation in the Himalayas and the Tibetan Plateau (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B3">Aggarwal et al., 2007</xref>; <xref ref-type="bibr" rid="B17">Chetri et al., 2016</xref>; <xref ref-type="bibr" rid="B115">Wang et al., 2020</xref>; <xref ref-type="bibr" rid="B123">Werhahn et al., 2020</xref>). Detailed and systematic morphological studies for the Himalayan wolf are recommended including the dental and cranial measurements included in the study by <xref ref-type="bibr" rid="B111">Viranta et al. (2017)</xref> on the African wolf. Differences in the mandibular coronoid process were described in <xref ref-type="bibr" rid="B56">Janssens et al. (2016)</xref> and <xref ref-type="bibr" rid="B48">Hodgson (1847)</xref> provided a historical description of the overall appearance and differences between this wolf of Tibet and the wolves of Europe. <xref ref-type="bibr" rid="B104">Srinivas and Jhala (2021)</xref> analyzed skulls of 12 Indian and 4 Himalayan wolves and found that the Himalayan wolf had the largest cranial measurements but that the cranial measurements and hair morphology considered could not reliably distinguish between the Indian and Himalayan wolf. <xref ref-type="bibr" rid="B93">Pocock (1935)</xref> provides cranial measurements of wolves from the general region but without confirmation of the lineage and revealing considerable individual variation in the size of the skull.</p>
<p>The lineage is supported by large-scale wolf phylogeographic studies (e.g., <xref ref-type="bibr" rid="B91">Pilot et al., 2010</xref>; <xref ref-type="bibr" rid="B96">Rueness et al., 2011</xref>; <xref ref-type="bibr" rid="B32">Gaubert et al., 2012</xref>; <xref ref-type="bibr" rid="B25">Ersmark et al., 2016</xref>; <xref ref-type="bibr" rid="B26">Fan et al., 2016</xref>; <xref ref-type="bibr" rid="B72">Loog et al., 2020</xref>), as well as comprehensive whole genome data (<xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>).</p>
<p><xref ref-type="bibr" rid="B99">Sharma et al. (2004)</xref> included 23 samples of the Himalayan wolf lineage analyzed for 440 bp of the mtDNA control region. <xref ref-type="bibr" rid="B3">Aggarwal et al. (2007)</xref> included 16 Himalayan wolf samples analyzed at the mtDNA D-loop, cytochrome <italic>b</italic> and 16S rRNA. Of these, one sample originated from a wild animal, while eight samples were from zoo animals likely duplicating at least in part the samples used in <xref ref-type="bibr" rid="B99">Sharma et al. (2004)</xref>; the remaining seven samples originated from museum collections. <xref ref-type="bibr" rid="B132">Zhang et al. (2014)</xref> analyzed 14 samples of presumed Himalayan wolves at 26 microsatellite makers and 25 SNPs (including three hypoxia-related genes), and full genomes for four presumed Himalayan wolf individuals. <xref ref-type="bibr" rid="B72">Loog et al. (2020)</xref> included 5 Himalayan/Tibetan wolf samples in their mitogenome analysis (from Tibet, Qinghai, Gansu, and Inner Mongolia of China) and their resulting phylogenetic tree indicates that these wolves are basal to all other Holarctic gray wolves (see <xref ref-type="supplementary-material" rid="DS1">Supplementary Figures S10</xref>&#x2013;<xref ref-type="supplementary-material" rid="DS1">S12</xref> of <xref ref-type="bibr" rid="B72">Loog et al., 2020</xref>). <xref ref-type="bibr" rid="B43">Hennelly et al. (2021)</xref> included 2 whole genome sequences of Himalayan/Tibetan wolf and 4 Indian wolf whole genome sequences in their study and found that both the Himalayan/Tibetan and the Indian wolf form evolutionary distinct and ancestral wolf lineages that are endemic to Asia and basal to all other gray wolf populations. The authors further deduct from their findings that southern Asia has acted as refugia for both the Indian and Himalayan/Tibetan wolf lineage during glaciation. While the modern Holarctic gray wolf lineages derived from a common ancestor approximately 50,000 years ago (<xref ref-type="bibr" rid="B72">Loog et al., 2020</xref>), the Himalayan and Indian wolf lineages evolved independently an order of magnitude earlier (<xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>), i.e., with different studies indicating a divergence of the Indian wolf around 200,000&#x2013;359,000 years ago and the Himalayan wolf at 496,000&#x2013;715,000 years ago based on mitogenomic analysis and genomic third-codon position tree calibration (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B124">Werhahn et al., 2018</xref>; <xref ref-type="bibr" rid="B115">Wang et al., 2020</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>).</p>
<p>In contrast with other mitogenomic and genomic studies, <xref ref-type="bibr" rid="B26">Fan et al. (2016)</xref>, using the same samples as <xref ref-type="bibr" rid="B132">Zhang et al. (2014)</xref>, placed the Himalayan wolf lineage as the most recent clade within the Holarctic gray wolf complex in their maximum likelihood phylogeny based on whole genome SNP data. <xref ref-type="bibr" rid="B113">vonHoldt et al. (2017)</xref>, also using <xref ref-type="bibr" rid="B132">Zhang et al. (2014)</xref> samples with the addition of one new sample, studied admixture at the hypoxia related EPAS gene. <xref ref-type="bibr" rid="B113">vonHoldt et al. (2017)</xref> conclude from their results that an adaptive variant of <italic>EPAS1</italic> in highland wolves, thought to be functioning in the hypoxia response at high elevation, was transferred to highland dogs. Careful verification of the origin and lineage of these repeatedly used samples is recommended, given that they originate from zoo animals, lack confirmed geographic origin, and in part show characteristics indicative of admixed individuals as found at the distribution edges in <xref ref-type="bibr" rid="B123">Werhahn et al. (2020)</xref>.</p>
<p><xref ref-type="bibr" rid="B115">Wang et al. (2020)</xref> concluded in their study based on full genome data from three high altitude wolves and 16 dogs from the region that the Tibetan and Himalayan wolves are closely related. Approximately 39% of the nuclear genome of these wolves was derived from a yet unrecognized wolf-like ancestor deeply diverged from living Holarctic wolves and dogs and from whom they received the EPAS1 haplotype which is related to the adaptive advantage at high altitudes (<xref ref-type="bibr" rid="B113">vonHoldt et al., 2017</xref>; <xref ref-type="bibr" rid="B115">Wang et al., 2020</xref>). Further, differences were found between Tibetan wolves and lowland wolves in their gene expression of 90 genes, including genes related to the respiratory chain, DNA repair mechanisms, reactive oxygen species regulation and cardiovascular homeostasis, all of which are important for physiological coping with high-altitude conditions. The authors conclude that these differently expressed genes, enriched in functions related to energy metabolism, hypoxic response, and cardiovascular homeostasis, may contribute to the adaptation of the Tibetan wolf to life on the Qinghai-Tibetan Plateau (<xref ref-type="bibr" rid="B71">Liu et al., 2019</xref>).</p>
<p><xref ref-type="bibr" rid="B125">Werhahn et al. (2017b</xref>,<xref ref-type="bibr" rid="B124">2018)</xref> analyzed 82 non-invasive Himalayan wolf samples for 17 microsatellite loci and for four non-synonymous SNPs in three hypoxia-pathway related functional nuclear genes, a subset for ZF genes on both sex chromosomes, and &#x003E; 280 samples at the mtDNA loci and find that the Himalayan wolf presents a monophyletic lineage basal to the Holarctic gray wolf complex. In their study on Japanese wolf lineages, <xref ref-type="bibr" rid="B76">Matsumura et al. (2014)</xref> included available mitochondrial DNA samples from the Himalayan wolf lineage from the study by <xref ref-type="bibr" rid="B80">Meng et al. (2009)</xref> and <xref ref-type="bibr" rid="B89">Pang et al. (2009)</xref>, and found that the wolves of Tibet &#x201C;form a remarkably different clade.&#x201D; These findings were also supported by <xref ref-type="bibr" rid="B69">Li et al. (2011</xref>, <xref ref-type="bibr" rid="B70">2014)</xref>.</p>
<p>The divergence time for the Himalayan wolf from the ancestors of the wolf-dog clade is estimated at between 0.69 and 0.80 Ma ago based on molecular clock analysis of the mitochondrial DNA and 0.496,000 Ma (0.388&#x2013;0.644) based on third-codon position tree (<xref ref-type="bibr" rid="B99">Sharma et al., 2004</xref>; <xref ref-type="bibr" rid="B76">Matsumura et al., 2014</xref>; <xref ref-type="bibr" rid="B124">Werhahn et al., 2018</xref>; <xref ref-type="bibr" rid="B43">Hennelly et al., 2021</xref>; but note the different results found in <xref ref-type="bibr" rid="B26">Fan et al., 2016</xref>, based on genomic data). The Himalayan wolf may have existed as a distinct lineage before the radiation of the contemporary Holarctic gray wolf (<xref ref-type="bibr" rid="B96">Rueness et al., 2011</xref>), a distinction that is also reflected in howl acoustics differences (<xref ref-type="bibr" rid="B45">Hennelly et al., 2017</xref>). A genetic distance analysis based on the full mitochondrial genome in <xref ref-type="bibr" rid="B123">Werhahn et al. (2020)</xref> results in a similar genetic distance between the Holarctic gray and Himalayan wolf as between the Holarctic gray and African wolf. The genetic distance of the Himalayan to the Holarctic gray wolf is larger than that for the recognized subspecies (<xref ref-type="bibr" rid="B123">Werhahn et al., 2020</xref>). Taxon recognition is supported by the evidence. Given the need of taxonomic consistency within the canid family, these findings imply that the Himalayan wolf should be recognized at the same taxonomic level as the Indian and African wolf (<xref ref-type="bibr" rid="B6">&#x00C1;lvares et al., 2019</xref>).</p>
<p>The scientific name for the Himalayan wolf was recently recommended as <italic>C. l. chanco</italic> by <xref ref-type="bibr" rid="B6">&#x00C1;lvares et al. (2019)</xref>. Different scientific names have been used over the past decades. <xref ref-type="bibr" rid="B126">Wilson and Reeder (2005)</xref> used <italic>C. l. filchneri</italic> (<xref ref-type="bibr" rid="B27">Filchner, 1908</xref>; Matschie, 1907; <xref ref-type="bibr" rid="B94">Pocock, 1941</xref>) referred to it as the wooly wolf <italic>C. l. chanco</italic> and <italic>C. l. laniger</italic> (<xref ref-type="bibr" rid="B48">Hodgson, 1847</xref>) as a synonym (<xref ref-type="bibr" rid="B48">Hodgson, 1847</xref>; <xref ref-type="bibr" rid="B37">Gray, 1863</xref>). NCBI GenBank currently lists <italic>C. l. chanco</italic> as the Mongolian wolf (<xref ref-type="bibr" rid="B82">NCBI GenBank Taxonomy <italic>Canis lupus chanco</italic>, 2019</xref>) and separately <italic>C. l. laniger</italic> as the Tibetan wolf (<xref ref-type="bibr" rid="B83">NCBI GenBank Taxonomy <italic>Canis lupus laniger</italic>, 2019</xref>). <xref ref-type="bibr" rid="B114">Wang et al. (2016)</xref>, in their review on wolves in China, used <italic>C. l. chanco</italic> according to past (now outdated) usage, i.e., using <italic>C. l. chanco</italic> for the wolf lineage in Mongolia and northern China. They described this subspecies in the Chinese provinces of Heilongjiang, Jilin, Liaoning, Inner Mongolia (eastern part), Hebei, Beijing, Shandong, Henan, and Shanxi, but these populations may belong to <italic>C. l. lupus.</italic></p>
<p>The type locality of <italic>C. chanco</italic> is given as the former Chinese Tartary, which comprised present day China and Mongolia. Thus, the genetic lineage of the holotype needs verification. The type locality for <italic>Lupus laniger</italic> by <xref ref-type="bibr" rid="B48">Hodgson (1847)</xref> is noted as Tibet, but as <xref ref-type="bibr" rid="B77">Mech (1974)</xref> points out this could also refer to little Tibet in Kashmir. The type locality of <italic>Lupus filchneri</italic> by <xref ref-type="bibr" rid="B27">Filchner (1908)</xref> is indicated to be Siningfu, which seems to refer to Xining in Qinghai Province of China. According to <xref ref-type="bibr" rid="B123">Werhahn et al. (2020)</xref> Xining may lay in the edge and admixture region of Himalayan wolf distribution. Recent studies have referred to it as <italic>C. himalayensis</italic> (<xref ref-type="bibr" rid="B3">Aggarwal et al., 2007</xref>; <xref ref-type="bibr" rid="B122">Werhahn et al., 2017a</xref>,<xref ref-type="bibr" rid="B125">b</xref>). This may be a <italic>nomen nudum</italic> and taxonomically not valid. However, the type specimen of the above taxa need genetic testing to verify the genetic lineage to conclusively inform the scientific name.</p>
</sec>
</sec>
<sec id="S4" sec-type="discussion">
<title>Discussion</title>
<p>Genetic, species and ecosystem diversity are the top three forms of biodiversity recognized for conservation (<xref ref-type="bibr" rid="B57">Jenkins, 1988</xref>; <xref ref-type="bibr" rid="B54">IUCN, 2016</xref>) while the conservation of evolutionary and ecosystem processes are increasingly recognized as essential for biodiversity conservation (<xref ref-type="bibr" rid="B105">Stanton et al., 2019</xref>; <xref ref-type="bibr" rid="B95">Quilodr&#x00E1;n et al., 2020</xref>). Diversified populations, irrespective of taxonomy, are important for biodiversity conservation as they represent evolutionary potential within a species (<xref ref-type="bibr" rid="B39">Haig et al., 2006</xref>) allowing them to adapt and meet future challenges such as disease, climatic change, and shifts in resource availability.</p>
<p>Taxonomic decisions need to keep taxon level consistency within the group in mind.</p>
<p>The revised Felidae taxonomy adopted a traffic light system with three main criteria (morphological, genetic, biogeographical) and adopted the threshold of a most recent common ancestor with another species at 800,000 years ago (<xref ref-type="bibr" rid="B68">Li et al., 2016</xref>; <xref ref-type="bibr" rid="B62">Kitchener et al., 2017</xref>).</p>
<p>For canids we can find some insights in the genetic distance analysis in <xref ref-type="table" rid="T2">Table 2</xref>. The coyote (<italic>C. latrans</italic>) shows 6.6% genetic distance on the cytochrome <italic>b</italic> gene from the Holarctic gray wolf. The Himalayan wolf and African wolf show comparable distances from the Holarctic gray wolf with 3.8 and 3.1%, respectively. In contrast, the genetic distance from the Holarctic gray wolf to the recognized subspecies is considerably smaller, with the Indian wolf at 1.36% and the Arabian wolf at 0.53% genetic distance. Of note is also the Iranian wolf sample at 0.45% genetic distance.</p>
<p><xref ref-type="bibr" rid="B13">Bradley and Baker (2001)</xref> found that, for mammals (particularly rodents and bats), a &#x003E; 5% distance on the cytochrome <italic>b</italic> was typically observed between morphologically recognized mammal species. Our results imply that for canids, the species level is drawn at similar, but lower, genetic distance, which is reasonable given that the group is especially characterized by gene flow across lineages (<xref ref-type="bibr" rid="B35">Gopalakrishnan et al., 2018</xref>).</p>
<p>The Indian and the Himalayan/Tibetan wolf have been identified as ESUs by <xref ref-type="bibr" rid="B123">Werhahn et al. (2020)</xref> and <xref ref-type="bibr" rid="B43">Hennelly et al. (2021)</xref> and deserve more scientific and conservation attention.</p>
<p>The recognition as an ESU is a valuable designation to guide conservation action, but it should not be considered a taxonomic classification. ESUs reflect an evolutionary history and are a valuable for conservation which must be fast acting. Meanwhile, taxonomy is carefully evaluating emerging data and may be often slow acting. <xref ref-type="bibr" rid="B62">Kitchener et al. (2017)</xref> add that ESUs may represent species or subspecies awaiting recognition.</p>
<p>While the currently available evidence for the lineages may not be complete, such as lacking systematic data on morphology or behavior, the evidence we do have in hand, such as the genetic and genomics data as well as the biogeographical data, may indicate species level recognition for both the Indian and Himalayan/Tibetan wolf lineage, also when considering the taxonomic classification and corresponding levels of diversification of other wolf lineages including the recently recognized African wolf and North American wolf lineages. However, the appropriate taxonomic level for these Asian lineages will depend on what guidelines and criteria are decided upon by an expert group for a consistent re-evaluation of canid taxonomy.</p>
<sec id="S4.SS1">
<title>Admixture and Hybridization in <italic>Canis</italic></title>
<p>Introgression has been important in the evolution of the canid family (<xref ref-type="bibr" rid="B35">Gopalakrishnan et al., 2018</xref>) and gene flow among lineages may be important for evolutionary processes. Wolf species delineation is complex not only due to a long history of admixture between different wolf lineages, also including domestic dogs <italic>C. familiaris</italic>, but also past range contractions and expansions due to glaciation (<xref ref-type="bibr" rid="B91">Pilot et al., 2010</xref>). The extent of interbreeding varies and illustrates the adaptability and flexibility of wolves.</p>
<p>Hybridization between wolves and feral dogs poses a conservation challenge that requires research and consensus on the best management practice (<xref ref-type="bibr" rid="B23">Donfrancesco et al., 2019</xref>).</p>
<p>Gene flow is also documented among contemporary wild canids, e.g., among the red wolf <italic>C. rufus</italic> and coyote (<xref ref-type="bibr" rid="B1">Adams et al., 2003</xref>, <xref ref-type="bibr" rid="B2">2007</xref>), among North American gray wolf subspecies (<xref ref-type="bibr" rid="B112">vonHoldt et al., 2016</xref>; <xref ref-type="bibr" rid="B102">Sinding et al., 2018</xref>), and indications for gene flow are found between the Himalayan and gray wolf (<xref ref-type="bibr" rid="B123">Werhahn et al., 2020</xref>).</p>
<p>Wolves are highly mobile animals and dispersal ranges can be considerable (<xref ref-type="bibr" rid="B79">Mech et al., 1995</xref>; <xref ref-type="bibr" rid="B19">Ciucci et al., 2009</xref>). This high mobility further influences the degree of interspecific hybridization and gene flow. The width of a hybrid zone is proposed as a function of the distance traveled from birth to place of first reproduction and the degree of natural selection functioning against hybrids (<xref ref-type="bibr" rid="B119">Wayne et al., 2004</xref>).</p>
<p><xref ref-type="bibr" rid="B7">Baker and Bradley (2006)</xref> propose that two phylogenetic groups represent different species when hybridization is restricted to a limited geographic area, a stable hybrid belt, and outside the hybrid belt the two phylogenetic groups are defined by unique, conclusively supported monophyletic clades based on mitochondrial and nuclear genetic variation. This view is also supported by the fact that stable hybrid zones between species are documented across many taxa (<xref ref-type="bibr" rid="B8">Barton and Hewitt, 1985</xref>, <xref ref-type="bibr" rid="B9">1989</xref>). Similarly, <xref ref-type="bibr" rid="B41">Hausdorf (2011)</xref> concludes that one of the most important insight with regards to species concepts is that reproductive barriers are semipermeable to gene flow and that species differentiation takes place despite ongoing gene flow. Hence differentiation between populations maintained despite gene flow strengthens the case for considering the populations as different species.</p>
</sec>
<sec id="S4.SS2">
<title>Species Concepts</title>
<p><xref ref-type="bibr" rid="B47">Hey and Pinho (2012)</xref> state that &#x201C;species as evolutionary lineages are expected to show greater evolutionary independence from one another than populations within species.&#x201D; The authors investigated gene flow and divergence time as measures for species differentiation and concluded that both these measures show overlapping distributions for pairs of species and for pairs of populations within species but that both measures combined may be used to develop a repeatable tool for species diagnostics (<xref ref-type="bibr" rid="B47">Hey and Pinho, 2012</xref>).</p>
<p>The concept of a species is important, as legislation, conservation and the non-specialist science community rely on these taxonomic divisions and need species, as stated by <xref ref-type="bibr" rid="B31">Galtier (2019)</xref>, as a &#x201C;simplified representation of natural variation.&#x201D; <xref ref-type="bibr" rid="B75">Mace (2004)</xref> proposes to reduce the taxonomic inconsistencies by (a) standardizing the rules for delineation and (b) choosing an approach to delineate units for conservation recovery planning that recognizes the dynamic nature of natural systems.</p>
<p>For details on the various species concepts applied across different taxonomic groups today the reader may refer to the literature (e.g., <xref ref-type="bibr" rid="B20">Cracraft, 1983</xref>; <xref ref-type="bibr" rid="B7">Baker and Bradley, 2006</xref>; <xref ref-type="bibr" rid="B41">Hausdorf, 2011</xref>; <xref ref-type="bibr" rid="B28">Frankham et al., 2012</xref>, <xref ref-type="bibr" rid="B29">2017</xref>; <xref ref-type="bibr" rid="B105">Stanton et al., 2019</xref>).</p>
<p>Species delineation influences many applied issues, particularly wildlife conservation, as exemplified by lists of threatened species upon which legislators rely (<xref ref-type="bibr" rid="B46">Hey, 2006</xref>; <xref ref-type="bibr" rid="B73">Macdonald, 2019</xref>). Wolves belong to a taxonomic group that can exhibit continuous species boundaries. The resulting difficulties for species delineation and consequences for conservation are illustrated by the situation around wolves in North America which is subject to long standing scientific and legal debates (e.g., see <xref ref-type="bibr" rid="B127">Wilson et al., 2000</xref>; <xref ref-type="bibr" rid="B121">Weckworth et al., 2010</xref>; <xref ref-type="bibr" rid="B16">Chambers et al., 2012</xref>; <xref ref-type="bibr" rid="B21">Cronin et al., 2015</xref>; <xref ref-type="bibr" rid="B97">Rutledge et al., 2015</xref>; <xref ref-type="bibr" rid="B112">vonHoldt et al., 2016</xref>).</p>
<p>Taxonomic groupings are key to conservation efforts and there seems no way around them because they allow listing of species and subspecies in the listings of the global conservation authorities, such as the IUCN Red List of Threatened Species, appendices in the Convention on International Trade in Endangered Species of Wild Flora and Fauna (CITES), and TRAFFIC (wildlife trade monitoring network) (<xref ref-type="bibr" rid="B39">Haig et al., 2006</xref>). These lists in turn allow us to track species recovery and loss. Designation as evolutionary significant unit ESU provides valuable guidelines for conservation.</p>
<p>An integrative approach to taxonomy is required where the delimitation of life&#x2019;s diversity is attempted from multiple and complementary perspectives (phylogeography, morphology, population genetics, ecology, behavior) (<xref ref-type="bibr" rid="B22">Dayrat, 2005</xref>). Ongoing changes to any taxonomy are expected as long as they are based on heterogenous criteria and further many groups and areas still lack species resolution (<xref ref-type="bibr" rid="B88">Padial and De la Riva, 2021</xref>).</p>
</sec>
</sec>
<sec id="S5" sec-type="conclusion">
<title>Conclusion and Future Research Recommendations</title>
<p>Our review and genetic analysis find scientific support in the literature for the taxonomic eligibility of (a) the Indian wolf and the Himalayan/Tibetan wolf [at either subspecies or species level; but in consistency with recent taxonomic decisions for other canids such as the African wolf (<xref ref-type="bibr" rid="B6">&#x00C1;lvares et al., 2019</xref>)], (b) the Arabian wolf at subspecies level, and (c) expecting the presence of the Holarctic gray wolf (<italic>C. l. lupus</italic>) in large parts of Asia outside of the ranges expected for the taxa listed above. However, studies on wolves in Central Asia are few and in-depth wolf studies for Central Asia, Pakistan, Mongolia, and eastern Russia are recommended. The wolf populations in Iran merit further studies, especially with regards to their genetic lineage.</p>
<p>A systematic landscape scale sampling of morphometric and genetic characters of wolf-like canids in Asia is recommended, as data available for these free-ranging populations is rare. Especially contemporary wolf populations across China and Central Asia merit more in-depth studies around genetics, genomics, morphology, and ecology. We recommend sampling multiple male and female individuals in each lineage with verified geographic origin and with sampling spatially distributed across the estimated range. Full genome analysis is recommended with individuals from across each of the supported lineages&#x2019; range with multiple sampled individuals from the core of the distribution and the distribution edges to understand the lineages, their distribution and admixture at the boundaries. Such a full genome analysis should also include data from European and North American wolves, coyotes, and golden jackals as reference.</p>
<p>The same recommendation applies for a morphometric study which is recommended to be done in systematic manner in accordance with the methods used by <xref ref-type="bibr" rid="B111">Viranta et al. (2017)</xref>, i.e., multiple female and male individuals with verified geographic origin and with sampling spatially distributed across the estimated range should be analyzed. In addition, in depth studies on the ecology and behavior of the different wolf lineages of Asia are recommended.</p>
<p>A re-evaluation of worldwide <italic>Canis</italic> taxonomy is recommended due to various new insights around canid phylogeny in recent studies. However, more morphological and genomic range-wide data will be important to inform a detailed revision. This should be based on consistent criteria that are applied across the entire canid family and ideally are comparable to those used in revised taxonomies of other mammalian groups. These guidelines and criteria are best established by a well-represented canid expert group.</p>
</sec>
<sec id="S6">
<title>Author Contributions</title>
<p>GW, HS, DM, and CS-Z conceived the concept and revised the article. GW conducted the literature review, conducted the analysis, and prepared the first draft. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="conf1" sec-type="COI-statement">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="pudiscl1" sec-type="disclaimer">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
<back>
<sec id="S7" sec-type="funding-information">
<title>Funding</title>
<p>GW was supported by the Oxford-Lady Margaret Hall-NaturalMotion Graduate Scholarship.</p>
</sec>
<ack><p>We thank the three reviewers for their valuable comments.</p>
</ack>
<sec id="S9" sec-type="supplementary-material">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fevo.2022.782528/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fevo.2022.782528/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Data_Sheet_1.docx" id="DS1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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