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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Ecol. Evol.</journal-id>
<journal-title>Frontiers in Ecology and Evolution</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Ecol. Evol.</abbrev-journal-title>
<issn pub-type="epub">2296-701X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fevo.2017.00053</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Ecology and Evolution</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Urbanization Is Associated with Divergence in Pace-of-Life in Great Tits</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Charmantier</surname> <given-names>Anne</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/381709/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Demeyrier</surname> <given-names>Virginie</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Lambrechts</surname> <given-names>Marcel</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Perret</surname> <given-names>Samuel</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Gr&#x000E9;goire</surname> <given-names>Arnaud</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Unit&#x000E9; Mixte de Recherche 5175, Centre d&#x02019;&#x000C9;cologie Fonctionnelle et &#x000C9;volutive, Centre National de la Recherche Scientifique-Universit&#x000E9; de Montpellier</institution> <country>Montpellier, France</country></aff>
<aff id="aff2"><sup>2</sup><institution>D&#x000E9;partement des Sciences Biologiques, Universit&#x000E9; du Qu&#x000E9;bec &#x000E0; Montr&#x000E9;al</institution> <country>Montr&#x000E9;al, QC, Canada</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Caroline Isaksson, Lund University, Sweden</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Hanne Lovlie, Link&#x000F6;ping University, Sweden; Amanda R. Ridley, University of Western Australia, Australia</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: Anne Charmantier <email>anne.charmantier&#x00040;cefe.cnrs.fr</email></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to Behavioral and Evolutionary Ecology, a section of the journal Frontiers in Ecology and Evolution</p></fn></author-notes>
<pub-date pub-type="epub">
<day>29</day>
<month>05</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="collection">
<year>2017</year>
</pub-date>
<volume>5</volume>
<elocation-id>53</elocation-id>
<history>
<date date-type="received">
<day>01</day>
<month>03</month>
<year>2017</year>
</date>
<date date-type="accepted">
<day>10</day>
<month>05</month>
<year>2017</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2017 Charmantier, Demeyrier, Lambrechts, Perret and Gr&#x000E9;goire.</copyright-statement>
<copyright-year>2017</copyright-year>
<copyright-holder>Charmantier, Demeyrier, Lambrechts, Perret and Gr&#x000E9;goire</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract><p>As an extension of the classic life history theory, the recently highlighted pace-of-life syndrome hypothesis predicts the coevolution of behavioral, physiological and life-history traits. For instance, bolder and shyer individuals do not only differ in personality profiles, but also in neuro-endocrinology and breeding patterns. While theory predicts that bolder (i.e., proactive), more aggressive individuals should colonize more rapidly urbanized habitats than shyer (i.e., reactive), less aggressive individuals, it is also predicted that across generations, adaptive selection processes could favor shyer individuals that are more sensitive to novel environmental cues. Here we compared two personality traits (handling aggression, exploration score in a novel environment), one physiological trait related to stress response (breath rate) and four breeding traits (lay date, clutch size, hatching success and fledging success) in a rural and an urban study population of Mediterranean great tits <italic>Parus major</italic>. Mixed models revealed strong phenotypic divergence between forest and city in most traits explored, in particular in personality, whereby urban great tits were more reactive to stress and faster explorers compared to rural birds (yet not more aggressive). Urban birds also laid smaller broods earlier in spring compared to their rural conspecifics, and city broods resulted in lower hatching success yet interestingly fledging success was similar. Nest-box centered measures of anthropogenic (artificial light, pedestrians, and cars) perturbation and resource abundance allowed us to go beyond the classical forest/city comparison by exploring the phenotypic variation across an urbanization gradient. This revealed that high urbanization in nest-box surroundings was associated overall with earlier breeding and smaller clutches, but also with faster breath rate, although these trends showed strong annual variation. Ongoing rapid urbanization and non-random gene flow between rural and urban great tits could both contribute to the high prevalence of bold breeders in the city. Our study suggests the existence of urban and rural great tit ecotypes with different pace-of-life, but also a finer-scale divergence along the degree of urbanization within the city. Future studies are required to determine whether this phenotypic variation at different spatiotemporal scales is adaptive and whether it has a genetic basis or results from phenotypic plasticity.</p></abstract>
<kwd-group>
<kwd>urban pace-of-life</kwd>
<kwd>great tit</kwd>
<kwd>personality traits</kwd>
<kwd>breath rate</kwd>
<kwd>breeding performance</kwd>
<kwd>urbanization gradient</kwd>
</kwd-group>
<contract-num rid="cn001">ERC-2013-StG-337365-SHE</contract-num>
<contract-sponsor id="cn001">European Research Council<named-content content-type="fundref-id">10.13039/501100000781</named-content></contract-sponsor>
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<table-count count="4"/>
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<ref-count count="83"/>
<page-count count="13"/>
<word-count count="10848"/>
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</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>Understanding the mechanisms by which organisms adapt to spatiotemporal environmental heterogeneity remains a fundamental goal in evolutionary ecology. It is tightly linked to another major goal in the field, namely understanding the maintenance of the wide phenotypic (and genetic) variation we observe in nature. As an extension of the classic life history theory (Roff, <xref ref-type="bibr" rid="B68">1992</xref>, <xref ref-type="bibr" rid="B69">2002</xref>; Stearns, <xref ref-type="bibr" rid="B75">1992</xref>), the recently highlighted pace-of-life syndrome (POLS) hypothesis (Ricklefs and Wikelski, <xref ref-type="bibr" rid="B66">2002</xref>; Martin et al., <xref ref-type="bibr" rid="B49">2006</xref>; R&#x000E9;ale et al., <xref ref-type="bibr" rid="B64">2010</xref>), predicts the coevolution of life histories with a suite of ecologically relevant co-varying traits in metabolism, immunology, and behavior. The POLS hypothesis provides testable predictions concerning the association between the slow-fast life history continuum and behavioral, physiological, and immunological traits. In short, the pace-of-life continuum differentiates between, on the one hand <italic>slow</italic> individuals with slow life-histories (e.g., high survival, delayed reproduction), reactive behaviors (e.g., shyness, low aggressiveness, and low activity) and low metabolism, and on the other hand <italic>fast</italic> individuals with fast life-histories, proactive behaviors and high metabolism (R&#x000E9;ale et al., <xref ref-type="bibr" rid="B64">2010</xref>). Although the POLS concept has attracted paramount attention in behavior ecology and eco-physiology, empirical support for the POLS hypothesis is currently mixed (Hille and Cooper, <xref ref-type="bibr" rid="B35">2015</xref>), perhaps because POLS theory still lacks a conceptual framework to predict which ecological conditions will favor which syndromes. Most notably, many studies in the last decade have tested adaptive explanations for the evolution of repeatable individual differences in behavior (aka <italic>personality</italic>) (Wolf et al., <xref ref-type="bibr" rid="B82">2007</xref>) and a number of theoretical studies have attempted to predict the conditions favoring the evolution of personalities (Dingemanse and Wolf, <xref ref-type="bibr" rid="B23">2010</xref>).</p>
<p>The urban matrix and its progression across rural landscapes represent for many organisms a drastic and very rapid change in environmental conditions compared to the natural habitats where they have evolved (Sih et al., <xref ref-type="bibr" rid="B70">2011</xref>). These urban conditions such as novel social interactions, pollution, or altered plant-animal interactions, induce novel selection pressures requiring adaptive changes from native organisms (Atwell et al., <xref ref-type="bibr" rid="B5">2012</xref>). Moreover, the urban matrix is often highly heterogeneous, offering little connectivity between favorable habitats (Lindenmayer and Fischer, <xref ref-type="bibr" rid="B45">2006</xref>). This radical environmental shift causing the fragmentation, isolation and degradation of natural habitats represents an acute global biodiversity conservation issue (e.g., McKinney, <xref ref-type="bibr" rid="B53">2002</xref>; Aronson et al., <xref ref-type="bibr" rid="B4">2014</xref>). However, urban development can also be viewed as a unique opportunity to investigate eco-evolutionary processes in a rapidly changing environment (Alberti, <xref ref-type="bibr" rid="B2">2015</xref>; McDonnell and Hahs, <xref ref-type="bibr" rid="B52">2015</xref>). Indeed, cities have recently been highlighted as hotspots of contemporary evolution, where rates of phenotypic changes are greater in urbanized areas compared to natural but also to non-urban anthropogenic habitats (Hendry et al., <xref ref-type="bibr" rid="B33">2008</xref>; Alberti et al., <xref ref-type="bibr" rid="B3">2017</xref>). In the context of the evolution of pace-of-life syndromes as outlined above, urban landscapes can be viewed as an ideal setting to test whether animals display differential phenotypes for physiological, life history and behavioral traits across the urban/natural landscape, but also within the heterogeneous urban matrix.</p>
<p>It is widely recognized that urbanization can act as an ecological filter favoring certain species that are more urban tolerant (Williams et al., <xref ref-type="bibr" rid="B81">2009</xref>; Silva et al., <xref ref-type="bibr" rid="B71">2016</xref>), thus leading to differences in species compositions across urbanization gradients (e.g., for avian communities, Sol et al., <xref ref-type="bibr" rid="B73">2014</xref>; Clucas and Marzluff, <xref ref-type="bibr" rid="B15">2015</xref>). For instance, in such inter-specific context, the &#x0201C;cognitive buffer hypothesis&#x0201D; predicts that larger brained animals have higher adaptive abilities in novel and challenging environmental conditions such as urban habitats (Sol et al., <xref ref-type="bibr" rid="B72">2005</xref>). Since individuals within a species can show strong persistent variation in a large set of traits related to adaptation, a similar process of filtering can be predicted to occur between conspecifics, whereby individuals with particular phenotypes will be favored in the urban landscape. Although there are presently no formal theoretical predictions on POLS in urban environments, the general expectation is that urban habitats will be more favorable to fast living individuals (Evans et al., <xref ref-type="bibr" rid="B29">2010</xref>; Atwell et al., <xref ref-type="bibr" rid="B5">2012</xref>) which are often higher dispersers hence more likely colonizers (Cote et al., <xref ref-type="bibr" rid="B17">2010</xref>). The ornithological literature already offers many examples of adjustments in urban birds compared to rural conspecifics that are concordant with this expectation (see recent review in Marzluff, <xref ref-type="bibr" rid="B50">2017</xref>). Urban birds are usually more aggressive (e.g., Minias, <xref ref-type="bibr" rid="B54">2015</xref>; Davies and Sewall, <xref ref-type="bibr" rid="B18">2016</xref>), bolder (e.g., Ducatez et al., <xref ref-type="bibr" rid="B26">2017</xref>), can be approached more closely by humans (e.g., Lin et al., <xref ref-type="bibr" rid="B44">2012</xref>; M&#x000F8;ller et al., <xref ref-type="bibr" rid="B55">2015</xref>), are less neophobic (e.g., Tryjanowski et al., <xref ref-type="bibr" rid="B78">2016</xref>), have higher levels of disturbance tolerance (Lowry et al., <xref ref-type="bibr" rid="B47">2013</xref>) and reduced levels of physiological stress response (e.g., Partecke et al., <xref ref-type="bibr" rid="B60">2006</xref>; Minias, <xref ref-type="bibr" rid="B54">2015</xref>). Other empirical comparisons between urban and rural birds have also suggested shifts in breeding strategies: urban birds usually have earlier laying dates, smaller clutch sizes, lower reproductive success (e.g., Peach et al., <xref ref-type="bibr" rid="B61">2008</xref>; review in Chamberlain et al., <xref ref-type="bibr" rid="B12">2009</xref>), and higher adult survival rates (e.g., Rebolo-Ifran et al., <xref ref-type="bibr" rid="B65">2015</xref>). Hence overall, the empirical literature so far seems to suggest that urban birds tend to have slow life histories yet fast behavioral syndromes (Figure 1 in R&#x000E9;ale et al., <xref ref-type="bibr" rid="B64">2010</xref>). This discrepancy could result from the lack of integrative study exploring all types of traits simultaneously in the same urban context, but it could also be indicative of the emergence of novel covariances between life history and behavioral traits. In order to test whether urban birds occupy a particular position on the POLS continuum, we now need multivariate studies that investigate breeding, physiological and behavioral traits in concert. Also, the heterogeneity of the urban matrix providing a variety of environments from forested parks to industrial areas could be exploited in order to go beyond the urban/rural dichotomy and test whether the fast-slow continuum matches the urbanization gradient.</p>
<p>Using longitudinal data across 6 years from a great tit <italic>Parus major</italic> population monitoring in the city of Montpellier (France) and in a nearby rural oak forest (La Rouvi&#x000E8;re), we address in this study the following main questions:
<list list-type="roman-lower">
<list-item><p>Do great tits show divergent urban versus forest ecotypes for personality, physiological, and breeding traits?</p></list-item>
<list-item><p>Do these traits display gradual phenotypic variation across an urbanization gradient?</p></list-item>
<list-item><p>Is the phenotypic variation observed in these traits concordant with the pace-of-life syndrome hypothesis, whereby individuals in more constraining and novel environments will have faster life histories, will be bolder and more susceptible to acute stress?</p></list-item>
</list></p>
<p>The comparative approaches between urban and forest birds and across the urban gradient include two personality traits (handling aggression, exploration score in a novel environment), one physiological trait related to stress response (breath rate under constraint) and four breeding traits (laying date, clutch size, hatching success, and fledging success).</p>
</sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and methods</title>
<sec>
<title>Study area and monitoring</title>
<sec>
<title>Sites and monitoring</title>
<p>Breeding great tits <italic>Parus major</italic> were monitored and captured in nest-boxes in two main study areas in the south of France: a rural oak forest and an urban environment (Figure <xref ref-type="supplementary-material" rid="SM1">S1</xref>). First, captures and measures were done in the La Rouvi&#x000E8;re forest dominated by downy oaks (<italic>Quercus humilis</italic>), located 20 km North-West of the city of Montpellier. Great tits (and blue tits) have been monitored in this forest since 1991 with weekly visits to all nest-boxes and all individuals marked with unique leg rings (see details on monitoring in following paragraph and in Doutrelant et al., <xref ref-type="bibr" rid="B24">2000</xref>; Blondel et al., <xref ref-type="bibr" rid="B8">2006</xref>). Second, captures were also done in nest-boxes within the city of Montpellier (area 56.88 km<sup>2</sup>, human population <italic>ca</italic> 272,000 in 2013, source: Wikipedia), where a similar breeding monitoring is performed in areas containing both parks and streets (Demeyrier et al., <xref ref-type="bibr" rid="B19">2016</xref>). The monitoring in the city of Montpellier started in 2011, providing information on brood-specific life history (exact lay date, clutch size, hatching, and fledgling success) yet capture of breeding parents started in 2013 and behavioral assays (see below) in 2014. In this study we used datasets of varying sizes depending on the variables studied, with data collected between 2011 and 2016. Number of nest-boxes fluctuated over the years because of theft and changes in entrance-hole size. The number of nest-boxes with large entrance holes (32 mm) allowing great tits to enter and breed, fluctuated between 51 (in 2011) and 92 (in 2016) in La Rouvi&#x000E8;re forest, and between 163 (in 2012) and 183 (in 2013) in the city of Montpellier.</p>
</sec>
<sec>
<title>Breeding data collection</title>
<p>Monitoring of broods started before nest construction and ended after the last nestling had fledged. Weekly nest-box field visits to each brood resulted in the observation of the exact date when the first egg was laid (lay date, March 1st &#x0003D; 1), the number of eggs laid (clutch size), the number of hatchlings, and the number of fledglings (nests were visited at 15 days, and then 21 days after hatching to check fledging). In order to compare with previous studies (e.g., Vaugoyeau et al., <xref ref-type="bibr" rid="B79">2016</xref>), only data collected on first broods were considered in the analyses. Parents were captured and measured when their nestlings were 9&#x02013;15 days old and uniquely identified with metal rings provided by the CRBPO (Centre de Recherches sur la Biologie des Populations d&#x00027;Oiseaux, Museum National d&#x00027;Histoire Naturelle, Paris). Nestlings were also uniquely ringed and measured at 14&#x02013;15 days old.</p>
</sec>
</sec>
<sec>
<title>Urbanization measures</title>
<p>As previously described in Demeyrier et al. (<xref ref-type="bibr" rid="B19">2016</xref>), four features of the urban matrix were measured within a 50 m radius around each nest-box: vegetation cover, car traffic, pedestrian count, and intensity of artificial light. Demeyrier et al. (<xref ref-type="bibr" rid="B19">2016</xref>) provide all the details on how these measures were performed, but also how they were analyzed in a principal component analysis (PCA, see Figure 4 in Demeyrier et al., <xref ref-type="bibr" rid="B19">2016</xref>). From this PCA, we extracted the two major axes: PC1 reflecting habitat naturalness and hereafter abbreviated &#x0201C;naturalness&#x0201D; (positively related to vegetation cover and negatively correlated with car traffic and artificial lights, explaining 56.6% of the variance), and PC2 reflecting the pedestrian frequency, hereafter abbreviated &#x0201C;pedestrian&#x0201D; (explaining 16.7% of the variance in the urban environmental features).</p>
</sec>
<sec>
<title>Behavioral assays</title>
<p>The behavioral trials were performed in both La Rouvi&#x000E8;re forest and Montpellier in 2014, 2015, and 2016. Great tit parents were caught in their breeding nest-boxes while feeding their 9&#x02013;15 days old nestlings. A captured bird was kept for around 20 min in total, during which time it was submitted to the following sequence of events: capture in the nest-box, handling aggression scoring, resting phase in cloth bag for 5 min, measure of breath rate during handling, resting phase of 2 min in small acclimatization compartment adjacent but separated from the main open-field cage (Figure <xref ref-type="fig" rid="F1">1</xref>), exploratory scoring in open-field trial during 4 min, ringing (if not already ringed), morphological measurements (body mass, tarsus, tail and wing lengths), and blood sampling.</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>Pictures of the experimental open-field cage for the novel environment test. <bold>(A)</bold> View of the operational cage at the zoo of Lunaret (Montpellier). <bold>(B)</bold> View from above to see the division between area 1 of the cage where the bird is released during the trial and area 2 (the rest of the cage) which serves as an empty compartment to control for distance with the camera and light conditions. <bold>(C)</bold> Picture of the movie view during a trial.</p></caption>
<graphic xlink:href="fevo-05-00053-g0001.tif"/>
</fig>
<p>First, immediately after its capture, a bird was tested for handling aggression by the capturer. The handler held the bird high up in the legs with one hand and nagged the bird with one finger from his/her other hand following a standardized procedure where the finger approaches the bird but does not touch it. After <italic>ca</italic>. 15 s of test and observation, the handler attributed a handling aggression score (HA, following the standardized criteria list in Table S4 of Dubuc-Messier et al., <xref ref-type="bibr" rid="B25">2016</xref>, see also Brommer and Kluen, <xref ref-type="bibr" rid="B10">2012</xref>; Class et al., <xref ref-type="bibr" rid="B14">2014</xref>), ranging from 0 (completely unreactive bird) to 3 (bird aiming for the handler&#x00027;s finger all the time, spreading its wings and tail), with 0.5 increments. Following this first behavioral assay, the bird was placed in a bag for 5 min and brought to the open-field apparatus which was less than 5 min walking distance from the nest-box. Second, right after it was removed from the cloth bag, the bird was held still on its back by the handler who counted twice in a row the number of breaths during 30 s (breaths were visually expressed via fast movements of the chest). Handling breath rate (HBR) was the number of breaths per minute, averaged over the two measures (Carere and van Oers, <xref ref-type="bibr" rid="B11">2004</xref>; Fucikova et al., <xref ref-type="bibr" rid="B30">2009</xref>; Brommer and Kluen, <xref ref-type="bibr" rid="B10">2012</xref>; Kluen et al., <xref ref-type="bibr" rid="B38">2014</xref>). HBR has been shown in other tit populations to be positively related to stress response (Carere and van Oers, <xref ref-type="bibr" rid="B11">2004</xref>). Third, a &#x0201C;novel environment test&#x0201D; was performed in a unique experimental open-field cage built following the exact set up and dimensions described in Stuber et al. (<xref ref-type="bibr" rid="B76">2013</xref>) (Figure <xref ref-type="fig" rid="F1">1</xref>). This kind of set-up has been classically used to measure exploration behavior in great tits (e.g., Stuber et al., <xref ref-type="bibr" rid="B76">2013</xref>) and blue tits (e.g., Mutzel et al., <xref ref-type="bibr" rid="B56">2013</xref>; Dubuc-Messier et al., <xref ref-type="bibr" rid="B25">2016</xref>), and provides exploratory scores that are repeatable and well correlated to those performed in the laboratory (e.g., in Dutch and German great tits, Dingemanse et al., <xref ref-type="bibr" rid="B21">2002</xref>; Stuber et al., <xref ref-type="bibr" rid="B76">2013</xref>). Right after the HBR measure, the bird was placed in a double door small compartment on the side of the open-field cage for acclimatization during 2 min with no visual cue other than the small cage of dimensions 11 &#x000D7; 12 &#x000D7; 11 cm. Following this resting time, the bird was released through a sliding door into the exploration cage of 61 &#x000D7; 39 &#x000D7; 40 cm dimensions, where it was filmed during 4 min by a camcorder (CH4 Sony Handycam) fixed 110 cm away from the wired side of the open-field cage. The bird was free to move around the cage and/or to settle on three perches. The light was standardized since the open-field cage was placed in a wider cage of dimension 61 &#x000D7; 150 &#x000D7; 40 cm, lighted by two led lights. Following previous studies on great tits, the total number of flights and hops during the open-field trial was used as a proxy of exploratory behavior (e.g. Dingemanse et al., <xref ref-type="bibr" rid="B21">2002</xref>). This number was square root transformed (to minimize deviation from normality and following Nicolaus et al., <xref ref-type="bibr" rid="B58">2016</xref>) and hereafter called exploration score. VD analyzed all videos using the software JWatcher (Blumstein et al., <xref ref-type="bibr" rid="B9">2006</xref>) and scored this behavior.</p>
</sec>
<sec>
<title>Data analysis</title>
<p>All statistical analyses were run with the software R (version 3.3.2, R Core Team, <xref ref-type="bibr" rid="B63">2016</xref>). We used several datasets to restrict the limitations of missing data in the various variables. In a first step of the analyses, we compared breeding, personality and physiological traits between the forest and the urban habitats using two-sided <italic>t</italic>-tests on the entire dataset available (considering the data from both known and unknown parents), hence not restricting to observations where the identity of one parent was known. For this and all other analyses, we removed estimations of number of hatchlings and number of fledglings for all broods that had been (experimentally) manipulated after the egg-laying stage, which explains smaller sample sizes for these two variables compared to lay date and clutch size.</p>
<p>The first step in the statistical analysis compared population means using a dataset where many female identities were unknown (since parents were not captured during the first 2 years of monitoring) providing an idea of results that can be obtained without comprehensive monitoring and individual ringing.</p>
<p>In a second step, we more formally tested for differences between forest and urban birds with univariate linear mixed models (LMM, package lme4, Bates et al., <xref ref-type="bibr" rid="B7">2015</xref>) which included habitat type (forest <italic>versus</italic> city) as a fixed effect and female identity as a random effect. All LMMs initially included as fixed effects habitat (forest <italic>versus</italic> urban), year, a habitat &#x000D7; year interaction and other trait-specific fixed effects (see below). The fixed effect model was selected in a backward stepwise procedure starting with a model including all variables. The significance of each fixed effect was tested using likelihood-ratio tests (Bates et al., <xref ref-type="bibr" rid="B7">2015</xref>). While all behavioral and physiological traits showed no significant correlations (Tables <xref ref-type="table" rid="T1">1C,D</xref>), the three reproductive performance traits were highly correlated (Tables <xref ref-type="table" rid="T1">1A,B</xref> and Table <xref ref-type="supplementary-material" rid="SM1">S1</xref>). Hence clutch size was included as a fixed effect in brood size models (hereafter called hatching success), and brood size was included as a fixed effect in number of fledglings models (hereafter called fledgling success). For handling aggression and breath rate, the initial full model included fixed effects for sex (and sex &#x000D7; habitat interaction), age, individual life-long capture rank (from 1 to 3, for first to third capture of the same individual) and ambient temperature, and observer/manipulator identity as a random effect. For exploration score, we included sex (and sex &#x000D7; habitat interaction), age, test rank (from 1 to 3), and temperature as fixed effects. As our factor of interest, habitat was kept in all models, even if not significant, to provide the effect size and statistics associated with its fit in the model. Since these LMMs included a female random effect, the dataset used in this second step included breeding parameters that had been recorded for broods where the female was captured only, hence the number of observations was reduced compared to the first dataset.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Phenotypic correlations (above the diagonal) among <bold>(A,B)</bold> breeding traits (in forest and city) and <bold>(C,D)</bold> behavior and physiological traits (in forest and city), and their associated <italic>P</italic>-values (below the diagonal).</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left" colspan="5" style="background-color:#bbbdc0"><bold>(A)</bold></th>
</tr>
<tr>
<th valign="top" align="left"><bold>Forest</bold></th>
<th valign="top" align="center"><bold>Lay date</bold></th>
<th valign="top" align="center"><bold>Clutch size</bold></th>
<th valign="top" align="center"><bold>Nb hatchlings</bold></th>
<th valign="top" align="center"><bold>Nb fledglings</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Lay date</td>
<td/>
<td valign="top" align="center">&#x02212;0.105</td>
<td valign="top" align="center">&#x02212;<bold>0.19</bold></td>
<td valign="top" align="center">&#x02212;<bold>0.24</bold></td>
</tr>
<tr>
<td valign="top" align="left">Clutch size</td>
<td valign="top" align="center">0.21</td>
<td/>
<td valign="top" align="center"><bold>0.58</bold></td>
<td valign="top" align="center">0.13</td>
</tr>
<tr>
<td valign="top" align="left">Nb hatchlings</td>
<td valign="top" align="center">0.02</td>
<td valign="top" align="center">4.E-14</td>
<td/>
<td valign="top" align="center"><bold>0.44</bold></td>
</tr>
<tr>
<td valign="top" align="left">Nb fledglings</td>
<td valign="top" align="center">0.003</td>
<td valign="top" align="center">0.13</td>
<td valign="top" align="center">1.E-08</td>
<td/>
</tr>
<tr>
<td valign="top" align="left" colspan="5" style="background-color:#bbbdc0"><bold>(B)</bold></td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left"><bold>City</bold></td>
<td valign="top" align="center"><bold>Lay date</bold></td>
<td valign="top" align="center"><bold>Clutch size</bold></td>
<td valign="top" align="center"><bold>Nb hatchlings</bold></td>
<td valign="top" align="center"><bold>Nb fledglings</bold></td>
</tr>
<tr>
<td valign="top" align="left">Lay date</td>
<td/>
<td valign="top" align="center">&#x02212;<bold>0.182</bold></td>
<td valign="top" align="center">0.017</td>
<td valign="top" align="center"><bold>0.12</bold></td>
</tr>
<tr>
<td valign="top" align="left">Clutch size</td>
<td valign="top" align="center">6.E-05</td>
<td/>
<td valign="top" align="center"><bold>0.441</bold></td>
<td valign="top" align="center"><bold>0.29</bold></td>
</tr>
<tr>
<td valign="top" align="left">Nb hatchlings</td>
<td valign="top" align="center">0.75</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
<td/>
<td valign="top" align="center"><bold>0.62</bold></td>
</tr>
<tr>
<td valign="top" align="left">Nb fledglings</td>
<td valign="top" align="center">0.03</td>
<td valign="top" align="center">3E-08</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
<td valign="top" align="center"/>
</tr>
<tr>
<td valign="top" align="left" colspan="5" style="background-color:#bbbdc0"><bold>(C)</bold></td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left"><bold>Forest</bold></td>
<td valign="top" align="center"><bold>HA</bold></td>
<td valign="top" align="center"><bold>Exploration</bold></td>
<td valign="top" align="center"><bold>HBR</bold></td>
<td valign="top" align="center"/>
</tr> <tr>
<td valign="top" align="left">HA</td>
<td/>
<td valign="top" align="center">0.12</td>
<td valign="top" align="center">&#x02212;3.E-04</td>
<td valign="top" align="center"/>
</tr>
<tr>
<td valign="top" align="left">Exploration</td>
<td valign="top" align="center">0.22</td>
<td/>
<td valign="top" align="center">&#x02212;0.05</td>
<td valign="top" align="center"/>
</tr>
<tr>
<td valign="top" align="left">HBR</td>
<td valign="top" align="center">1.00</td>
<td valign="top" align="center">0.62</td>
<td/>
<td valign="top" align="center"/>
</tr>
<tr>
<td valign="top" align="left" colspan="5" style="background-color:#bbbdc0"><bold>(D)</bold></td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left"><bold>City</bold></td>
<td valign="top" align="center"><bold>HA</bold></td>
<td valign="top" align="center"><bold>Exploration</bold></td>
<td valign="top" align="center"><bold>HBR</bold></td>
<td valign="top" align="center"/>
</tr> <tr>
<td valign="top" align="left">HA</td>
<td/>
<td valign="top" align="center">&#x02212;0.05</td>
<td valign="top" align="center">0.07</td>
<td valign="top" align="center"/>
</tr>
<tr>
<td valign="top" align="left">Exploration</td>
<td valign="top" align="center">0.38</td>
<td/>
<td valign="top" align="center">&#x02212;0.05</td>
<td valign="top" align="center"/>
</tr>
<tr>
<td valign="top" align="left">HBR</td>
<td valign="top" align="center">0.24</td>
<td valign="top" align="center">0.47</td>
<td/>
<td valign="top" align="center"/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Lay date is calendar date of first egg laid; clutch size is the number of eggs laid; nb hatchlings is the number of nestlings hatched; nb fledglings is the number of nestlings that survived until fledging; HA is handling aggression; exploration is the exploration score from open-field trials and HBR is handling breath rate. Pearson&#x00027;s correlation coefficients are provided above the diagonal and associated <italic>P</italic>-values below the diagonal. In bold are highlighted significant coefficients (<italic>P</italic> &#x0003C; 0.05). For values of the t statistics and degrees of freedom, see Table <xref ref-type="supplementary-material" rid="SM1">S1</xref></italic>.</p>
</table-wrap-foot>
</table-wrap>
<p>Based on the best models retained in this step 2, we estimated an adjusted repeatability with the package rptR (Nakagawa and Schielzeth, <xref ref-type="bibr" rid="B57">2010</xref>) for all focal traits. We estimated overall repeatabilities across the whole dataset but also sex-specific and habitat-specific repeatabilities.</p>
<p>In a third and final step, we used only data collected in the city of Montpellier to contrast the measured traits against the two urbanization gradients revealed by the PCA of environmental features in the city: habitat naturalness, abbreviated &#x0201C;naturalness&#x0201D; (PC1) and pedestrian frequency, abbreviated &#x0201C;pedestrian&#x0201D; (PC2). Model selection was similar to that in step 2 (with similar fixed and random effects structure), apart from the use of naturalness and pedestrian instead of the habitat variable which previously was used to compare forest and city. As previously, naturalness was kept in all models since it was our main variable of interest.</p>
<p>Sample sizes are indicated in Table <xref ref-type="table" rid="T2">2</xref> (for step 1), Table <xref ref-type="table" rid="T3">3</xref> (for step 2), and Table <xref ref-type="table" rid="T4">4</xref> (for step 3). While models for phenology and reproductive success were female-specific, models on behavior and physiology pooled data on both sexes, with balanced sampling across sexes since 47&#x02013;48% of observations were on males (detailed sex-specific sample sizes are in Table <xref ref-type="supplementary-material" rid="SM1">S3</xref>).</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Comparison of mean traits between forest and city great tits based on the full monitoring dataset (hence including broods with unknown parents).</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th/>
<th valign="top" align="center" colspan="3" style="border-bottom: thin solid #000000;"><bold>Forest</bold></th>
<th valign="top" align="center" colspan="3" style="border-bottom: thin solid #000000;"><bold>City</bold></th>
<th valign="top" align="center" colspan="2" style="border-bottom: thin solid #000000;"><italic><bold>T</bold></italic><bold>-test</bold></th>
</tr>
<tr>
<th/>
<th valign="top" align="center"><bold><italic>Mean</italic></bold></th>
<th valign="top" align="center"><bold><italic>SD</italic></bold></th>
<th valign="top" align="center"><bold><italic>n</italic></bold></th>
<th valign="top" align="center"><bold><italic>Mean</italic></bold></th>
<th valign="top" align="center"><bold><italic>SD</italic></bold></th>
<th valign="top" align="center"><bold><italic>n</italic></bold></th>
<th valign="top" align="center"><bold><italic>t</italic></bold></th>
<th valign="top" align="center"><bold><italic>P</italic></bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><bold>Lay date</bold></td>
<td valign="top" align="center"><bold>42.45</bold></td>
<td valign="top" align="center"><bold>6.8</bold></td>
<td valign="top" align="center"><bold>150</bold></td>
<td valign="top" align="center"><bold>38.42</bold></td>
<td valign="top" align="center"><bold>8.11</bold></td>
<td valign="top" align="center"><bold>480</bold></td>
<td valign="top" align="center"><bold>-6.03</bold></td>
<td valign="top" align="center"><bold>5e-9</bold></td>
</tr>
<tr>
<td valign="top" align="left"><bold>Clutch size</bold></td>
<td valign="top" align="center"><bold>9.19</bold></td>
<td valign="top" align="center"><bold>1.84</bold></td>
<td valign="top" align="center"><bold>144</bold></td>
<td valign="top" align="center"><bold>7.59</bold></td>
<td valign="top" align="center"><bold>1.53</bold></td>
<td valign="top" align="center"><bold>487</bold></td>
<td valign="top" align="center"><bold>-1.93</bold></td>
<td valign="top" align="center"><bold>2e-16</bold></td>
</tr>
<tr>
<td valign="top" align="left"><bold>Number of hatchlings</bold></td>
<td valign="top" align="center"><bold>7.55</bold></td>
<td valign="top" align="center"><bold>3.43</bold></td>
<td valign="top" align="center"><bold>150</bold></td>
<td valign="top" align="center"><bold>5.89</bold></td>
<td valign="top" align="center"><bold>2.74</bold></td>
<td valign="top" align="center"><bold>351</bold></td>
<td valign="top" align="center"><bold>-5.26</bold></td>
<td valign="top" align="center"><bold>3e-7</bold></td>
</tr>
<tr>
<td valign="top" align="left">Number of fledglings</td>
<td valign="top" align="center">4.52</td>
<td valign="top" align="center">3.64</td>
<td valign="top" align="center">150</td>
<td valign="top" align="center">4.38</td>
<td valign="top" align="center">2.88</td>
<td valign="top" align="center">349</td>
<td valign="top" align="center">-0.41</td>
<td valign="top" align="center">0.68</td>
</tr>
<tr>
<td valign="top" align="left">Handling aggression</td>
<td valign="top" align="center">1.75</td>
<td valign="top" align="center">1.01</td>
<td valign="top" align="center">106</td>
<td valign="top" align="center">1.81</td>
<td valign="top" align="center">1.04</td>
<td valign="top" align="center">310</td>
<td valign="top" align="center">0.56</td>
<td valign="top" align="center">0.57</td>
</tr>
<tr>
<td valign="top" align="left"><bold>Exploration score</bold></td>
<td valign="top" align="center"><bold>3.49</bold></td>
<td valign="top" align="center"><bold>3.83</bold></td>
<td valign="top" align="center"><bold>114</bold></td>
<td valign="top" align="center"><bold>6.45</bold></td>
<td valign="top" align="center"><bold>4.23</bold></td>
<td valign="top" align="center"><bold>320</bold></td>
<td valign="top" align="center"><bold>6.89</bold></td>
<td valign="top" align="center"><bold>6e-11</bold></td>
</tr>
<tr>
<td valign="top" align="left">Breath rate</td>
<td valign="top" align="center">127.29</td>
<td valign="top" align="center">18.42</td>
<td valign="top" align="center">114</td>
<td valign="top" align="center">130.13</td>
<td valign="top" align="center">16.86</td>
<td valign="top" align="center">318</td>
<td valign="top" align="center">1.44</td>
<td valign="top" align="center">0.15</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Boxplots for these comparisons are shown in Figure <xref ref-type="supplementary-material" rid="SM1">S2</xref>. In bold, traits showing significant differences between forest and city (P &#x0003C; 0.05)</italic>.</p>
</table-wrap-foot>
</table-wrap>
<table-wrap-group position="float" id="T3">
<label>Table 3</label>
<caption><p>Contrasting phenology, reproductive success, behavior, and physiology between forest and city birds (Habitat) using linear mixed models with female/individual identity and manipulator identity (for handling aggression and breath rate) as random effects.</p></caption>
<table-wrap>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th/>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Lay date</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Clutch size</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Hatching success</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Fledging success</bold></th>
</tr>
<tr>
<th valign="top" align="left"><bold>Fixed Effects</bold></th>
<th valign="top" align="center"><bold><italic>Est</italic>.</bold></th>
<th valign="top" align="center"><bold><italic>SE</italic></bold></th>
<th valign="top" align="center"><bold><italic>t</italic></bold></th>
<th valign="top" align="center"><bold><italic>P</italic></bold></th>
<th valign="top" align="center"><bold><italic>Est</italic>.</bold></th>
<th valign="top" align="center"><bold><italic>SE</italic></bold></th>
<th valign="top" align="center"><bold><italic>t</italic></bold></th>
<th valign="top" align="center"><bold><italic>P</italic></bold></th>
<th valign="top" align="center"><bold><italic>Est</italic>.</bold></th>
<th valign="top" align="center"><bold><italic>SE</italic></bold></th>
<th valign="top" align="center"><bold><italic>t</italic></bold></th>
<th valign="top" align="center"><bold><italic>P</italic></bold></th>
<th valign="top" align="center"><bold><italic>Est</italic>.</bold></th>
<th valign="top" align="center"><bold><italic>SE</italic></bold></th>
<th valign="top" align="center"><bold><italic>t</italic></bold></th>
<th valign="top" align="center"><bold><italic>P</italic></bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Intercept</td>
<td valign="top" align="center">46.95</td>
<td valign="top" align="center">1.15</td>
<td valign="top" align="center">40.88</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
<td valign="top" align="center">10.07</td>
<td valign="top" align="center">0.66</td>
<td valign="top" align="center">15.25</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
<td valign="top" align="center">0.51</td>
<td valign="top" align="center">0.640</td>
<td valign="top" align="center">0.80</td>
<td valign="top" align="center">0.42</td>
<td valign="top" align="center">2.56</td>
<td valign="top" align="center">0.91</td>
<td valign="top" align="center">2.82</td>
<td valign="top" align="center">5e-03</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Habitat-urban</td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>3.97</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.99</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>4.01</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>9e-05</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>1.49</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.23</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>6.53</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>4e-10</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>0.68</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.24</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>2.89</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>4e-3</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.24</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.44</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.54</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.59</td>
</tr>
<tr>
<td valign="top" align="left">Year-2014</td>
<td valign="top" align="center">&#x02212;10.50</td>
<td valign="top" align="center">1.09</td>
<td valign="top" align="center">&#x02212;9.64</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
<td valign="top" align="center">&#x02212;0.17</td>
<td valign="top" align="center">0.27</td>
<td valign="top" align="center">&#x02212;0.62</td>
<td valign="top" align="center">0.53</td>
<td valign="top" align="center">&#x02212;0.33</td>
<td valign="top" align="center">0.27</td>
<td valign="top" align="center">&#x02212;1.22</td>
<td valign="top" align="center">0.22</td>
<td valign="top" align="center">&#x02212;0.11</td>
<td valign="top" align="center">0.53</td>
<td valign="top" align="center">&#x02212;0.21</td>
<td valign="top" align="center">0.83</td>
</tr>
<tr>
<td valign="top" align="left">Year-2015</td>
<td valign="top" align="center">&#x02212;2.90</td>
<td valign="top" align="center">1.14</td>
<td valign="top" align="center">&#x02212;2.54</td>
<td valign="top" align="center">0.02</td>
<td valign="top" align="center">&#x02212;0.63</td>
<td valign="top" align="center">0.24</td>
<td valign="top" align="center">&#x02212;2.59</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">0.56</td>
<td valign="top" align="center">0.29</td>
<td valign="top" align="center">1.97</td>
<td valign="top" align="center">0.05</td>
<td valign="top" align="center">0.28</td>
<td valign="top" align="center">0.55</td>
<td valign="top" align="center">0.50</td>
<td valign="top" align="center">0.62</td>
</tr>
<tr>
<td valign="top" align="left">Year-2016</td>
<td valign="top" align="center">&#x02212;5.78</td>
<td valign="top" align="center">1.13</td>
<td valign="top" align="center">&#x02212;5.11</td>
<td valign="top" align="center">6e-07</td>
<td valign="top" align="center">&#x02212;0.34</td>
<td valign="top" align="center">0.25</td>
<td valign="top" align="center">&#x02212;1.33</td>
<td valign="top" align="center">0.18</td>
<td valign="top" align="center">&#x02212;0.68</td>
<td valign="top" align="center">0.24</td>
<td valign="top" align="center">&#x02212;2.89</td>
<td valign="top" align="center">0.04</td>
<td valign="top" align="center">&#x02212;1.07</td>
<td valign="top" align="center">0.52</td>
<td valign="top" align="center">&#x02212;2.04</td>
<td valign="top" align="center">0.04</td>
</tr>
<tr>
<td valign="top" align="left">Lay date</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;0.01</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">&#x02212;1.08</td>
<td valign="top" align="center">0.28</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
</tr>
<tr>
<td valign="top" align="left">Clutch size</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">0.86</td>
<td valign="top" align="center">0.06</td>
<td valign="top" align="center">13.96</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left">Brood size</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">0.34</td>
<td valign="top" align="center">0.09</td>
<td valign="top" align="center">3.79</td>
<td valign="top" align="center">2e-04</td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left"><bold>Random effects</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
</tr> <tr>
<td valign="top" align="left">Female ID</td>
<td valign="top" align="center">19.88</td>
<td valign="top" align="center">4.46</td>
<td valign="top" align="center" colspan="2">Nb &#x02640; &#x0003D; 217</td>
<td valign="top" align="center">1.25</td>
<td valign="top" align="center">1.12</td>
<td valign="top" align="center" colspan="2">Nb &#x02640; &#x0003D; 217</td>
<td valign="top" align="center">0.65</td>
<td valign="top" align="center">0.81</td>
<td valign="top" align="center" colspan="2">Nb &#x02640; &#x0003D; 188</td>
<td valign="top" align="center">1.19</td>
<td valign="top" align="center">1.09</td>
<td valign="top" align="center" colspan="2">Nb &#x02640; &#x0003D; 187</td>
</tr>
<tr>
<td valign="top" align="left">Residual</td>
<td valign="top" align="center">26.30</td>
<td valign="top" align="center">5.13</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 278</td>
<td valign="top" align="center">1.00</td>
<td valign="top" align="center">1.00</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 278</td>
<td valign="top" align="center">1.44</td>
<td valign="top" align="center">1.20</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 223</td>
<td valign="top" align="center">6.30</td>
<td valign="top" align="center">2.51</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 223</td>
</tr>
</tbody>
</table>
</table-wrap>


<table-wrap>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th/>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Handling aggression</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Exploration score</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Breath rate</bold></th>
</tr>
<tr style="border-bottom: thin solid #000000;">
<th valign="top" align="left"><bold>Fixed effects</bold></th>
<th valign="top" align="center"><italic><bold>Est</bold></italic>.</th>
<th valign="top" align="center"><italic><bold>SE</bold></italic></th>
<th valign="top" align="center"><italic><bold>t</bold></italic></th>
<th valign="top" align="center"><italic><bold>P</bold></italic></th>
<th valign="top" align="center"><italic><bold>Est</bold></italic>.</th>
<th valign="top" align="center"><italic><bold>SE</bold></italic></th>
<th valign="top" align="center"><italic><bold>t</bold></italic></th>
<th valign="top" align="center"><italic><bold>P</bold></italic></th>
<th valign="top" align="center"><italic><bold>Est</bold></italic>.</th>
<th valign="top" align="center"><italic><bold>SE</bold></italic></th>
<th valign="top" align="center"><italic><bold>t</bold></italic></th>
<th valign="top" align="center"><italic><bold>P</bold></italic></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Intercept</td>
<td valign="top" align="center">1.97</td>
<td valign="top" align="center">0.15</td>
<td valign="top" align="center">13.08</td>
<td valign="top" align="center">6e-13</td>
<td valign="top" align="center">3.66</td>
<td valign="top" align="center">0.42</td>
<td valign="top" align="center">8.62</td>
<td valign="top" align="center">4e-16</td>
<td valign="top" align="center">133.04</td>
<td valign="top" align="center">4.35</td>
<td valign="top" align="center">30.55</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Habitat - urban</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.07</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.12</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.60</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.55</td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>2.78</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.49</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>5.65</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>3e-8</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>4.02</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>1.95</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>2.06</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.04</bold></td>
</tr>
<tr>
<td valign="top" align="left">Sex-Female</td>
<td valign="top" align="center">&#x02212;0.43</td>
<td valign="top" align="center">0.10</td>
<td valign="top" align="center">&#x02212;4.17</td>
<td valign="top" align="center">4e-05</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left">Ambient temperature</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">&#x02212;0.36</td>
<td valign="top" align="center">0.16</td>
<td valign="top" align="center">&#x02212;2.16</td>
<td valign="top" align="center">0.03</td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left"><bold>Random effects</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
</tr> <tr>
<td valign="top" align="left">Individual ID</td>
<td valign="top" align="center">0.34</td>
<td valign="top" align="center">0.59</td>
<td valign="top" align="center" colspan="2">Nb ind. &#x0003D; 332</td>
<td valign="top" align="center">9.87</td>
<td valign="top" align="center">3.14</td>
<td valign="top" align="center" colspan="2">Nb ind. &#x0003D; 346</td>
<td valign="top" align="center">104.88</td>
<td valign="top" align="center">10.24</td>
<td valign="top" align="center" colspan="2">Nb ind. &#x0003D; 337</td>
</tr>
<tr>
<td valign="top" align="left">Manipulator ID</td>
<td valign="top" align="center">0.04</td>
<td valign="top" align="center">0.21</td>
<td valign="top" align="center" colspan="2">Nb manipul. &#x0003D; 6</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center" colspan="2"/>
<td valign="top" align="center">24.12</td>
<td valign="top" align="center">4.91</td>
<td valign="top" align="center" colspan="2">Nb manipul. &#x0003D; 4</td>
</tr>
<tr>
<td valign="top" align="left">Residual</td>
<td valign="top" align="center">0.62</td>
<td valign="top" align="center">0.79</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 413</td>
<td valign="top" align="center">7.53</td>
<td valign="top" align="center">2.74</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 432</td>
<td valign="top" align="center">162.51</td>
<td valign="top" align="center">12.75</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 423</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Gray areas highlight the focal effect of habitat type (forest vs. city), with significant results in bold (P &#x0003C; 0.05). ns: non-significant (P &#x0003E; 0.05). Sample sizes are provided for the number of females (Nb &#x02640;) or individuals (Nb ind.), the number of observations (Nb obs.) and the number of manipulators (Nb manipul.)</italic>.</p>
</table-wrap-foot>
</table-wrap>
</table-wrap-group>
<table-wrap-group position="float" id="T4">
<label>Table 4</label>
<caption><p>Contrasting phenology, reproductive success, behavior, and physiology along urban gradients of habitat naturalness (Naturalness) and pedestrian frequency (Pedestrian) using linear mixed models with female/individual identity and manipulator identity (for handling aggression and breath rate) as random effects.</p></caption>
<table-wrap>
<table frame="hsides" rules="groups">
<thead><tr>
<th/>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Lay date</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Clutch size</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Hatching success</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Fledging success</bold></th>
</tr>
<tr>
<th valign="top" align="left"><bold>Fixed effects</bold></th>
<th valign="top" align="center"><bold><italic>Est</italic>.</bold></th>
<th valign="top" align="center"><bold><italic>SE</italic></bold></th>
<th valign="top" align="center"><bold><italic>t</italic></bold></th>
<th valign="top" align="center"><bold><italic>P</italic></bold></th>
<th valign="top" align="center"><bold><italic>Est</italic>.</bold></th>
<th valign="top" align="center"><bold><italic>SE</italic></bold></th>
<th valign="top" align="center"><bold><italic>t</italic></bold></th>
<th valign="top" align="center"><bold><italic>P</italic></bold></th>
<th valign="top" align="center"><bold><italic>Est</italic>.</bold></th>
<th valign="top" align="center"><bold><italic>SE</italic></bold></th>
<th valign="top" align="center"><bold><italic>t</italic></bold></th>
<th valign="top" align="center"><bold><italic>P</italic></bold></th>
<th valign="top" align="center"><bold><italic>Est</italic>.</bold></th>
<th valign="top" align="center"><bold><italic>SE</italic></bold></th>
<th valign="top" align="center"><bold><italic>t</italic></bold></th>
<th valign="top" align="center"><bold><italic>P</italic></bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Intercept</td>
<td valign="top" align="center">42.94</td>
<td valign="top" align="center">1.05</td>
<td valign="top" align="center">40.82</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
<td valign="top" align="center">9.01</td>
<td valign="top" align="center">0.58</td>
<td valign="top" align="center">15.54</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
<td valign="top" align="center">&#x02212;0.58</td>
<td valign="top" align="center">0.84</td>
<td valign="top" align="center">&#x02212;0.69</td>
<td valign="top" align="center">0.49</td>
<td valign="top" align="center">3.04</td>
<td valign="top" align="center">0.82</td>
<td valign="top" align="center">3.69</td>
<td valign="top" align="center">3e-04</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Naturalness</td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>1.67</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.56</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>2.95</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>4e-03</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.30</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.10</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>3/00</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>3e-03</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.04</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.09</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.46</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.64</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.20</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.13</td>
<td valign="top" align="center" style="background-color:#bbbdc0">1.49</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Pedestrian</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
</tr>
<tr>
<td valign="top" align="left">Year-2014</td>
<td valign="top" align="center">&#x02212;9.44</td>
<td valign="top" align="center">1.38</td>
<td valign="top" align="center">&#x02212;6.82</td>
<td valign="top" align="center">2e-10</td>
<td valign="top" align="center">&#x02212;0.05</td>
<td valign="top" align="center">0.25</td>
<td valign="top" align="center">&#x02212;0.21</td>
<td valign="top" align="center">0.84</td>
<td valign="top" align="center">&#x02212;0.51</td>
<td valign="top" align="center">0.37</td>
<td valign="top" align="center">&#x02212;1.37</td>
<td valign="top" align="center">0.18</td>
<td valign="top" align="center">&#x02212;1.02</td>
<td valign="top" align="center">0.61</td>
<td valign="top" align="center">61.68</td>
<td valign="top" align="center">0.10</td>
</tr>
<tr>
<td valign="top" align="left">Year-2015</td>
<td valign="top" align="center">&#x02212;4.15</td>
<td valign="top" align="center">1.46</td>
<td valign="top" align="center">&#x02212;2.84</td>
<td valign="top" align="center">5e-3</td>
<td valign="top" align="center">&#x02212;0.61</td>
<td valign="top" align="center">0.25</td>
<td valign="top" align="center">&#x02212;2.46</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">0.86</td>
<td valign="top" align="center">0.40</td>
<td valign="top" align="center">2.13</td>
<td valign="top" align="center">0.04</td>
<td valign="top" align="center">0.10</td>
<td valign="top" align="center">0.64</td>
<td valign="top" align="center">0.16</td>
<td valign="top" align="center">0.87</td>
</tr>
<tr>
<td valign="top" align="left">Year-2016</td>
<td valign="top" align="center">&#x02212;6.64</td>
<td valign="top" align="center">1.44</td>
<td valign="top" align="center">&#x02212;4.62</td>
<td valign="top" align="center">7e-6</td>
<td valign="top" align="center">&#x02212;0.39</td>
<td valign="top" align="center">0.26</td>
<td valign="top" align="center">&#x02212;1.52</td>
<td valign="top" align="center">0.13</td>
<td valign="top" align="center">1.03</td>
<td valign="top" align="center">0.39</td>
<td valign="top" align="center">2.62</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">&#x02212;1.30</td>
<td valign="top" align="center">0.62</td>
<td valign="top" align="center">&#x02212;2.12</td>
<td valign="top" align="center">0.04</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Year<sup>&#x0002A;</sup>Naturalness-14</td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>1.88</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.75</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>2.49</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.01</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>0.27</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.12</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>2.26</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.03</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Year<sup>&#x0002A;</sup>Naturalness -15</td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>0.24</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.78</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>0.31</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.76</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>0.35</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.13</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>2.70</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>8e-03</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Year<sup>&#x0002A;</sup>Naturalness-16</td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>0.12</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.78</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>0.15</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.88</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>0.22</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.13</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>1.65</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.10</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
</tr>
<tr>
<td valign="top" align="left">Lay date</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;0.03</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">&#x02212;2.02</td>
<td valign="top" align="center">0.04</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
</tr>
<tr>
<td valign="top" align="left">Clutch size</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">0.88</td>
<td valign="top" align="center">0.10</td>
<td valign="top" align="center">8.59</td>
<td valign="top" align="center">2e-14</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left">Brood size</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">0.33</td>
<td valign="top" align="center">0.11</td>
<td valign="top" align="center">3.06</td>
<td valign="top" align="center">2e-03</td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left"><bold>Random effects</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size:</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
</tr> <tr>
<td valign="top" align="left">Female ID</td>
<td valign="top" align="center">21.38</td>
<td valign="top" align="center">4.62</td>
<td valign="top" align="center" colspan="2">Nb &#x02640; &#x0003D; 141</td>
<td valign="top" align="center">1.20</td>
<td valign="top" align="center">1.09</td>
<td valign="top" align="center" colspan="2">Nb &#x02640; &#x0003D; 141</td>
<td valign="top" align="center">1.51</td>
<td valign="top" align="center">1.23</td>
<td valign="top" align="center" colspan="2">Nb &#x02640; &#x0003D; 116</td>
<td valign="top" align="center">2.01</td>
<td valign="top" align="center">1.44</td>
<td valign="top" align="center" colspan="2">Nb &#x02640; &#x0003D; 116</td>
</tr>
<tr>
<td valign="top" align="left">Residual</td>
<td valign="top" align="center">27.48</td>
<td valign="top" align="center">5.24</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 183</td>
<td valign="top" align="center">0.49</td>
<td valign="top" align="center">0.70</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 183</td>
<td valign="top" align="center">1.21</td>
<td valign="top" align="center">1.10</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 133</td>
<td valign="top" align="center">4.27</td>
<td valign="top" align="center">2.07</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 133</td>
</tr>
</tbody>
</table>
</table-wrap>
<table-wrap>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th/>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Handling aggression</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Exploration score</bold></th>
<th valign="top" align="center" colspan="4" style="border-bottom: thin solid #000000;"><bold>Breath rate</bold></th>
</tr>
<tr>
<th valign="top" align="left"><bold>Fixed effects</bold></th>
<th valign="top" align="center"><italic><bold>Est</bold></italic>.</th>
<th valign="top" align="center"><italic><bold>SE</bold></italic></th>
<th valign="top" align="center"><italic><bold>t</bold></italic></th>
<th valign="top" align="center"><italic><bold>P</bold></italic></th>
<th valign="top" align="center"><italic><bold>Est</bold></italic>.</th>
<th valign="top" align="center"><italic><bold>SE</bold></italic></th>
<th valign="top" align="center"><italic><bold>t</bold></italic></th>
<th valign="top" align="center"><italic><bold>P</bold></italic></th>
<th valign="top" align="center"><italic><bold>Est</bold></italic>.</th>
<th valign="top" align="center"><italic><bold>SE</bold></italic></th>
<th valign="top" align="center"><italic><bold>t</bold></italic></th>
<th valign="top" align="center"><italic><bold>P</bold></italic></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Intercept</td>
<td valign="top" align="center">2.46</td>
<td valign="top" align="center">0.17</td>
<td valign="top" align="center">14.19</td>
<td valign="top" align="center">7e-12</td>
<td valign="top" align="center">6.38</td>
<td valign="top" align="center">0.28</td>
<td valign="top" align="center">22.81</td>
<td valign="top" align="center">&#x0003C;2e-16</td>
<td valign="top" align="center">133.35</td>
<td valign="top" align="center">3.13</td>
<td valign="top" align="center">42.54</td>
<td valign="top" align="center">6e-12</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Naturalness</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.03</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.03</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.88</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.38</td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;0.06</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.15</td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;0.43</td>
<td valign="top" align="center" style="background-color:#bbbdc0">0.67</td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>1.97</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>1.06</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0">&#x02212;<bold>1.87</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.06</bold></td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Pedestrian</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">Ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
</tr>
<tr>
<td valign="top" align="left">Sex-Female</td>
<td valign="top" align="center">&#x02212;0.44</td>
<td valign="top" align="center">0.13</td>
<td valign="top" align="center">&#x02212;3.50</td>
<td valign="top" align="center">6e-4</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">Ns</td>
<td valign="top" align="center">ns</td>
</tr>
<tr>
<td valign="top" align="left">Age-Juvenile</td>
<td valign="top" align="center">&#x02212;0.29</td>
<td valign="top" align="center">0.12</td>
<td valign="top" align="center">&#x02212;2.45</td>
<td valign="top" align="center">0.01</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">Ns</td>
<td valign="top" align="center">ns</td>
</tr>
<tr>
<td valign="top" align="left">Year-2015</td>
<td valign="top" align="center">&#x02212;0.34</td>
<td valign="top" align="center">0.16</td>
<td valign="top" align="center">&#x02212;2.16</td>
<td valign="top" align="center">0.03</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">&#x02212;4.88</td>
<td valign="top" align="center">2.35</td>
<td valign="top" align="center">&#x02212;2.08</td>
<td valign="top" align="center">0.04</td>
</tr>
<tr>
<td valign="top" align="left">Year-2016</td>
<td valign="top" align="center">&#x02212;0.36</td>
<td valign="top" align="center">0.16</td>
<td valign="top" align="center">&#x02212;2.28</td>
<td valign="top" align="center">0.02</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">ns</td>
<td valign="top" align="center">&#x02212;3.47</td>
<td valign="top" align="center">2.76</td>
<td valign="top" align="center">&#x02212;1.26</td>
<td valign="top" align="center">0.21</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bbbdc0">Year<sup>&#x0002A;</sup>Naturalness -15</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>3.43</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>1.31</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>2.62</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.01</bold></td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left" style="background-color:#bbbdc0">Year<sup>&#x0002A;</sup>Naturalness -16</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0">ns</td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>1.02</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>1.39</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.74</bold></td>
<td valign="top" align="center" style="background-color:#bbbdc0"><bold>0.46</bold></td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left"><bold>Random effects</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
<td valign="top" align="center"><bold>Variance</bold></td>
<td valign="top" align="center"><italic><bold>SD</bold></italic></td>
<td valign="top" align="center" colspan="2"><bold>Sample size</bold></td>
</tr> <tr>
<td valign="top" align="left">Individual ID</td>
<td valign="top" align="center">0.37</td>
<td valign="top" align="center">0.61</td>
<td valign="top" align="center" colspan="2">Nb ind. &#x0003D; 209</td>
<td valign="top" align="center">9.79</td>
<td valign="top" align="center">3.13</td>
<td valign="top" align="center" colspan="2">Nb ind. &#x0003D; 216</td>
<td valign="top" align="center">101.30</td>
<td valign="top" align="center">10.06</td>
<td valign="top" align="center" colspan="2">Nb ind. &#x0003D; 213</td>
</tr>
<tr>
<td valign="top" align="left">Manipulator ID</td>
<td valign="top" align="center">0.03</td>
<td valign="top" align="center">0.18</td>
<td valign="top" align="center" colspan="2">Nb manipul. &#x0003D; 6</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center">&#x02212;</td>
<td valign="top" align="center" colspan="2"/>
<td valign="top" align="center">18.79</td>
<td valign="top" align="center">4.33</td>
<td valign="top" align="center" colspan="2">Nb manipul. &#x0003D; 4</td>
</tr>
<tr>
<td valign="top" align="left">Residual</td>
<td valign="top" align="center">0.53</td>
<td valign="top" align="center">0.73</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 261</td>
<td valign="top" align="center">7.50</td>
<td valign="top" align="center">2.74</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 271</td>
<td valign="top" align="center">164.64</td>
<td valign="top" align="center">12.83</td>
<td valign="top" align="center" colspan="2">Nb obs. &#x0003D; 270</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Gray areas highlight the focal effect of the naturalness or pedestrian gradients, with significant results in bold (P &#x0003C; 0.05). ns, non-significant (P &#x0003E; 0.05). Sample sizes are provided for the number of females (Nb &#x02640;) or individuals (Nb ind.), the number of observations (Nb obs.) and the number of manipulators (Nb manipul.)</italic>.</p>
</table-wrap-foot>
</table-wrap>
</table-wrap-group>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<p>Comparison of mean traits between forest and city using the largest dataset (2011&#x02013;2016) without controlling for the identity of individuals showed strong differences in mean lay dates, clutch sizes, number of hatchlings, and exploration score, but no significant differences in number of fledglings, handling aggression, and breath rate during constraint (Table <xref ref-type="table" rid="T2">2</xref>, Figure <xref ref-type="supplementary-material" rid="SM1">S2</xref>).</p>
<p>An interesting result from this investigation on all monitoring data collected (after removing experimental broods) was a lower percentage of complete brood failure (i.e., no fledgling) in the city: 31% of complete brood failure in the forest <italic>versus</italic> 21% in the city (<italic>t</italic> &#x0003D; &#x02212;2.167, <italic>df</italic> &#x0003D; 253.82, <italic>P</italic> &#x0003D; 0.03). Unfortunately, this data could not be analyzed using Generalized Linear Mixed Models with individual identity as random effect since most failed broods did not allow parent capture and identification. In the latter dataset used in the LMM for breeding traits, brood failure was 32% in the forest vs. 29% in the city. Unfortunately, the large majority of these failures were of unknown cause, but we can hypothesize predation on a parent, catastrophic climatic event or abandonment by parents because of high levels of stress and parental care. Future research should investigate whether some of these drivers of brood failure differ between the forest and city environments.</p>
<p>Hence at first glance when comparing mean traits without controlling for fixed effects that may be important or the non-independence of data collected on the same individuals, city birds laid earlier, and smaller first clutches, with decreased hatching success yet decreased occurrence of complete brood failure, and they did not fledge a lower number of offspring (see statistical details in Table <xref ref-type="table" rid="T1">1</xref>). They also presented significantly higher exploration activity as well as slightly higher handling aggression and breath rate, although not significantly so.</p>
<p>When accounting in step 2 for the non-independence of data collected on the same individuals, restricting to records from known individuals (2013&#x02013;2016, sample sizes in Table <xref ref-type="table" rid="T3">3</xref>), and controlling for fixed effects, LMMs confirmed strong differences between forest and city great tits in their lay date, clutch size, hatching success (number of hatchlings when controlling for clutch size) (Table <xref ref-type="table" rid="T3">3</xref> and Figure <xref ref-type="fig" rid="F2">2</xref>), and interestingly still no significant difference between forest and city birds in their fledging success (number of fledglings controlling for number of hatchlings, Table <xref ref-type="table" rid="T3">3</xref> and Figure <xref ref-type="fig" rid="F2">2</xref>). Note that this non-significant result remained when modeling number of fledglings without controlling for the strong positive correlation with number of hatchlings, that is when comparing absolute fledgling number (Table <xref ref-type="supplementary-material" rid="SM1">S2</xref>). As in step 1, step 2 confirmed that city birds laid earlier and smaller first clutches, with decreased hatching success (Table <xref ref-type="table" rid="T3">3</xref>). Urban great tits also displayed faster exploration scores and faster breath rates, but did not differ from their forest conspecifics in handling aggression (see statistical details in Table <xref ref-type="table" rid="T3">3</xref> and Figure <xref ref-type="fig" rid="F2">2</xref>).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Predicted contrasts in breeding [<bold>A</bold>, lay date; <bold>B</bold>, clutch size; <bold>C</bold>, number of hatchlings (from a model controlling for clutch size), <bold>D</bold>, number of fledglings (controlling for number of hatchlings)], behavior (<bold>E</bold>, handling aggression; <bold>F</bold>, exploration score) and physiological traits (<bold>G</bold>, breath rate) between great tits from the forest of La Rouvi&#x000E8;re and great tits from the city of Montpellier. The graphs present the boxplot of predicted values from models detailed in Table <xref ref-type="table" rid="T3">3</xref>. For lay date, 1 &#x0003D; 1st March. Breath rate is in number of breaths/min.</p></caption>
<graphic xlink:href="fevo-05-00053-g0002.tif"/>
</fig>
<p>Both estimations of reproductive success were not repeatable among females (adjusted repeatabilities of 0.31 (<italic>SE</italic> &#x0003D; 0.14) for hatching success and 0.16 (<italic>SE</italic> &#x0003D; 0.14) for fledgling success, <italic>P</italic> &#x0003D; 1, Nakagawa and Schielzeth, <xref ref-type="bibr" rid="B57">2010</xref>). All other traits were significantly repeatable with adjusted repeatabilities of 0.43 (SE &#x0003D; 0.10, <italic>P</italic> &#x0003D; 2.3e-5) for lay date, 0.55 (<italic>SE</italic> &#x0003D; 0.08, <italic>P</italic> &#x0003D; 4.8e-3) for clutch size, 0.34 (<italic>SE</italic> &#x0003D; 0.09, <italic>P</italic> &#x0003D; 2.6e-4) for handling aggression, 0.55 (<italic>SE</italic> &#x0003D; 0.07, <italic>P</italic> &#x0003D; 5.2e-7) for exploration score and 0.35 (<italic>SE</italic> &#x0003D; 0.08, <italic>P</italic> &#x0003D; 8.6e-6) for breath rate during constraint. While sex- and habitat-specific repeatabilities were based on small sample sizes, they suggested that behavioral and physiological traits might be more repeatable in females than in males and more repeatable in forest than urban habitats (see Table <xref ref-type="supplementary-material" rid="SM1">S3</xref>). In contrast, laying date and clutch size were repeatable in urban birds but not in forest birds (where again, sample sizes were small, Table <xref ref-type="supplementary-material" rid="SM1">S3</xref>).</p>
<p>The step 3 analysis along the gradients of naturalness and pedestrian pressure showed no influence of pedestrian frequency on any of the focal traits (Table <xref ref-type="table" rid="T4">4</xref>). Three out of the seven traits studied showed variation across the naturalness gradient: in more urbanized areas great tit females laid earlier and smaller broods and birds had generally (see below) faster breath rates during handling (i.e., similar trends as found when contrasting urban and forest birds). In all three cases however, the strength (and even direction in the case of breath rate) of the urbanization effect showed significant variation across years (Table <xref ref-type="table" rid="T4">4</xref>, Figure <xref ref-type="fig" rid="F3">3</xref>): for example, later laying in more natural habitats was true for 3 years out of four (Figure <xref ref-type="fig" rid="F3">3A</xref>) and breath rate showed inconsistent changes along the urban gradient across the 3 years of study (Figure <xref ref-type="fig" rid="F3">3C</xref>).</p>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>Predicted variation in great tit lay date <bold>(A)</bold>, clutch size <bold>(B)</bold>, and breath rate <bold>(C)</bold> along the naturalness gradient in the city of Montpellier, for each year of data sampling, from the best linear mixed models, presented in Table <xref ref-type="table" rid="T4">4</xref>. For lay date, 1 &#x0003D; 1st March. Breath rate is in number of breaths/min.</p></caption>
<graphic xlink:href="fevo-05-00053-g0003.tif"/>
</fig>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>Based on 6 years of great tit monitoring in an oak forest and the nearby city of Montpellier in southern France, our study reveals strong phenotypic divergence for a suite of breeding, behavioral and physiological traits, both when comparing forest and city birds, but also for some of the traits, within the urban gradient. We discuss below how these results fit with the pace-of-life syndrome hypothesis, and what processes could be involved in these divergences.</p>
<sec>
<title>Phenotypic divergence between forest and city and along the urbanization gradient</title>
<p>We confirm here a commonly found breeding divergence, which is that city birds breed earlier and produce smaller clutches, and even more so in more urbanized areas of the city (Tables <xref ref-type="table" rid="T3">3</xref>, <xref ref-type="table" rid="T4">4</xref>, Figures <xref ref-type="fig" rid="F2">2A,B</xref> and <xref ref-type="fig" rid="F3">3A,B</xref>). Such urban effects on the timing of breeding and clutch size have been demonstrated before in great tits (e.g., Dhondt et al., <xref ref-type="bibr" rid="B20">1984</xref>; Wawrzyniak et al., <xref ref-type="bibr" rid="B80">2015</xref>) and many other avian species (see review in Marzluff, <xref ref-type="bibr" rid="B50">2017</xref>). Note however that in a recent comparative analysis of forest and urban passerines at a macro-geographic scale (including 138 great tit populations), Vaugoyeau et al. (<xref ref-type="bibr" rid="B79">2016</xref>) found that average laying date was not correlated with the degree of urbanization, while average clutch size decreased with urbanization in collared (<italic>Ficedula albicollis</italic>) and pied flycatchers (<italic>Ficedula hypoleuca</italic>) but not in great tits. Later laying and smaller clutches in cities have been attributed to the urban heat island effect, as well as the artificial lights and the lack of adequate resources (i.e., arthropods) during the breeding season (Chamberlain et al., <xref ref-type="bibr" rid="B12">2009</xref>; Kempenaers et al., <xref ref-type="bibr" rid="B37">2010</xref>).</p>
<p>Hatching success was lower in urban broods, yet this did not lead to lower fledging success (Table <xref ref-type="table" rid="T3">3</xref>, Figure <xref ref-type="fig" rid="F2">2D</xref>) nor to lower fledgling numbers (Table <xref ref-type="supplementary-material" rid="SM1">S2</xref>). Within the city, fledging success varied significantly across years but again was not significantly lower in more urbanized areas. It is possible that the slightly lower fledgling productivity in urban broods (Table <xref ref-type="table" rid="T2">2</xref>, Table <xref ref-type="supplementary-material" rid="SM1">S2</xref>) was not significant in our 6 years study because of insufficient power. However, it remains that while the other breeding traits show strong significant differences between forest and city, it did not translate in a similarly strong divergence for fledgling success. This result contrasts with previous findings in great tits (Bailly et al., <xref ref-type="bibr" rid="B6">2016</xref>) and with the common assessment that the urban environment induces strong constraints on avian reproduction (Gil and Brumm, <xref ref-type="bibr" rid="B31">2014</xref>). It raises the very interesting question of whether urban birds might display adaptive breeding strategies that differ from birds in the forest, yet do not lead to lower reproductive success (see further discussion on this possibility, below). Reduced clutch size would hence be the result of an adaptive process rather than the expression of energetic constraints. Overall in terms of POLS, the breeding data suggested that city birds displayed one element pointing to slower life histories (smaller clutches) yet did not differ consistently from forest birds in their reproductive output.</p>
<p>Our results on personality traits and breath rate were more consistent with the prediction of faster behavioral syndromes in urban compared to forest habitats. Handling aggression was not significantly influenced by the urban habitat, yet city birds were faster explorers with generally faster breath rate under constraint (Table <xref ref-type="table" rid="T3">3</xref>). Breath rate also varied across the urban gradient, yet with important annual variation (Table <xref ref-type="table" rid="T4">4</xref>, Figure <xref ref-type="fig" rid="F3">3C</xref>). Previous rural vs. urban avian comparisons for these traits found: lower short-term stress response in urban European blackbirds (Partecke et al., <xref ref-type="bibr" rid="B60">2006</xref>), reduced physiological stress and faster exploratory behavior in urban dark-eyed juncos <italic>Junco hyemalis</italic> (Atwell et al., <xref ref-type="bibr" rid="B5">2012</xref>; Abolins-Abols et al., <xref ref-type="bibr" rid="B1">2016</xref>), higher territorial aggression in urban song sparrows <italic>Melospiza melodia</italic> (Evans et al., <xref ref-type="bibr" rid="B29">2010</xref>), urban Australian magpies <italic>Gymnorhina tibicen</italic> (Cilento and Jones, <xref ref-type="bibr" rid="B13">1999</xref>), urban Eurasian coot <italic>Fulica atra</italic> (Minias, <xref ref-type="bibr" rid="B54">2015</xref>), and urban noisy miners <italic>Manorina melanocephala</italic> (Lowry et al., <xref ref-type="bibr" rid="B46">2011</xref>), and finally higher breath rates in urban great tits during handling (Torne-Noguera et al., <xref ref-type="bibr" rid="B77">2014</xref>, but see Senar et al. from this issue).</p>
<p>Mean breath rate during handling for Montpellier great tits was similar to that found in the study by Torne-Noguera et al. (<xref ref-type="bibr" rid="B77">2014</xref>, i.e., around 130 breaths/min) yet it was only around 2% higher than breath rate in forest birds, compared to a 14% difference in Barcelona (Torne-Noguera et al., <xref ref-type="bibr" rid="B77">2014</xref>). Our singular analysis along the urban gradient revealed strong annual variation in the breath rate response to urbanization level (Figure <xref ref-type="fig" rid="F3">3C</xref>), which could partly explain the discrepancies between previous studies (Partecke et al., <xref ref-type="bibr" rid="B60">2006</xref>; Torne-Noguera et al., <xref ref-type="bibr" rid="B77">2014</xref>; Senar et al. this special issue). While heart rate and breath rate are highly related (see e.g., Dubuc-Messier et al., <xref ref-type="bibr" rid="B25">2016</xref>), their interpretation is complicated by the fact that they reflect both sympathetic and parasympathetic reactivity (e.g., Koolhaas et al., <xref ref-type="bibr" rid="B40">1999</xref>), and that responses to long term or acute stresses differ (Abolins-Abols et al., <xref ref-type="bibr" rid="B1">2016</xref>). In rodents more aggressive and active individuals have a strong sympathetic response yet a low parasympathetic reactivity to acute stress, which translates into increased heart rate response (Koolhaas et al., <xref ref-type="bibr" rid="B39">1997</xref>). Similarly, domestic hens with active coping styles (high-feather peckers) have faster heart rates during manual restraint (Korte et al., <xref ref-type="bibr" rid="B41">1999</xref>). Hence overall, in the context of POLS, higher breath rate and faster exploration scores in urban great tits are suggestive of a faster pace-of-life.</p>
</sec>
<sec>
<title>Plastic vs. genetic origin and adaptive nature of divergence</title>
<p>While we have demonstrated in this study that forest and city great tits display strong phenotypic differences for breeding parameters, behavioral traits and physiological reaction to stress, two fundamental questions remain unanswered. The first question is whether these physiological differences emanate from underlying genetic differences, rather than plasticity. This would suggest that urban birds form a genetically distinct ecotype compared to forest birds, possibly because of a process of local adaptation. The second, related question, is whether the phenotypic differences we have described here result from an adaptive process since both plasticity and genetic processes (such as drift) can result in maladaptive responses.</p>
<p>As regards the first issue of a plastic vs. genetic origin in the phenotypic differences, a genetic difference can occur only if the focal traits are heritable, and in the case of restricted gene flow (Lenormand, <xref ref-type="bibr" rid="B43">2002</xref>). An interesting point to make here is that in our study populations, hatching and fledging success were not repeatable, and there is very little evidence for heritability of reproductive success in the literature (review in Postma, <xref ref-type="bibr" rid="B62">2014</xref>). All other focal traits studied here were repeatable and they were previously shown heritable, in great tits or in closely related avian species (for lay date and clutch size see review in Postma, <xref ref-type="bibr" rid="B62">2014</xref>, for aggression and exploration behavior see review in Dingemanse and Dochtermann, <xref ref-type="bibr" rid="B22">2014</xref>, for breath rate see Class et al., <xref ref-type="bibr" rid="B14">2014</xref>). This overview on heritability suggests that a rapid evolution of the focal traits is possible except for hatching and fledging success. Recent results in population genomics also provide useful knowledge on the neutral and adaptive genomic divergence of Montpellier great tits at both scales studied here (forest vs. city and urban gradient). Using a RAD sequencing analysis of nearly 50,000 SNPs in 140 great tits, Perrier and colleagues (Perrier et al. in review) show that the neutral genetic structure is weakly impacted by urbanization, with an average F<sc>st</sc> between La Rouvi&#x000E8;re forest and Montpellier city of 0.009 and an F<sc>st</sc> of 0.012 between the most and least urbanized sites within the city of Montpellier. While all F<sc>st</sc> were significant, their low value suggests that gene flow is common along the urban gradient and between forest and city. However, it could well be that non-random gene flow, e.g., via individuals matching their habitat choice to their phenotype (Edelaar et al., <xref ref-type="bibr" rid="B28">2008</xref>; Edelaar and Bolnick, <xref ref-type="bibr" rid="B27">2012</xref>) reinforces local adaptation. In fact it has been suggested that urbanization should favor individuals with high behavioral plasticity (Lowry et al., <xref ref-type="bibr" rid="B47">2013</xref>). Our preliminary results on habitat-specific repeatability (Table <xref ref-type="supplementary-material" rid="SM1">S3</xref>) show lower repeatability in the behavior and physiology of urban compared to forest birds which could be indicative of higher plasticity, although this is not true for breeding traits. An interesting avenue would hence be to focus on plasticity as a trait <italic>per se</italic>, evaluating how/whether it is heritable and selected for in the urban landscape and across the range of traits studied here (e.g., following the approach of Nussey et al., <xref ref-type="bibr" rid="B59">2005</xref> for plasticity of timing of breeding). We also envisage in the future a common garden study to experimentally test whether birds from more or less urbanized areas yet raised in aviaries display genetically based differences in the traits studied here.</p>
<p>Addressing the second question to find out whether the phenotypic variation described here is adaptive or not will require more long term data (including survival and reproductive data) to compare the direction and force of selection acting on the focal traits across the habitats (Isaksson, <xref ref-type="bibr" rid="B36">2015</xref>). It is commonly assumed that the novelty of the urban environmental features induces new and strong selection pressures providing the potential for rapid trait change (Mark&#x000F3; et al., <xref ref-type="bibr" rid="B48">2013</xref>; Alberti, <xref ref-type="bibr" rid="B2">2015</xref>; Hendry et al., <xref ref-type="bibr" rid="B34">2017</xref>). However, direct empirical measures of urban natural selection remain scarce (but see e.g., the emblematic peppered moth case, Cook and Saccheri, <xref ref-type="bibr" rid="B16">2013</xref>). New genomic resources offer a powerful way to bypass the data consuming classical selection analyses by testing for genome-wide signatures of selection associated with urbanization, even in non-model species (Harris et al., <xref ref-type="bibr" rid="B32">2015</xref>). While at first hand, breeding parameters show decreased clutch size and hatching success in city great tits compared to their forest conspecifics (Table <xref ref-type="table" rid="T3">3</xref>), a very important result from our study is that these city birds do not have lower fledgling rate or success (Table <xref ref-type="table" rid="T3">3</xref> and Table <xref ref-type="supplementary-material" rid="SM1">S2</xref>). This stability of reproductive performance in the nest despite strong differences in breeding traits, suggests that city birds might have evolved an adapted breeding strategy in response to urbanization with smaller clutches and broods to adjust to the lack of food for nestlings in the urban habitat (Chamberlain et al., <xref ref-type="bibr" rid="B12">2009</xref>). A comparison of morphological traits in our focal populations also points to possibly adaptive changes since urban great tits are smaller and lighter than forest birds yet they do not differ in body condition (Demeyrier et al. in prep.).</p>
</sec>
<sec>
<title>Perspectives on a multivariate long-term process</title>
<p>Previous studies have shown enhanced annual survival in urban adult birds, in particular because of higher resource availability over winter (Rebolo-Ifran et al., <xref ref-type="bibr" rid="B65">2015</xref>; Marzluff et al., <xref ref-type="bibr" rid="B51">2016</xref>). In the context of the pace-of-life theory, such decreased probability of mortality would be indicative of a slower pace-of-life (R&#x000E9;ale et al., <xref ref-type="bibr" rid="B64">2010</xref>). However, new predation pressures in the city are also thought to affect avian survival, especially nestlings&#x00027;, and overall rural/urban survival comparisons are still scarce and show no consistent pattern (Chamberlain et al., <xref ref-type="bibr" rid="B12">2009</xref>). With only 3 years of breeding captures, our study lacked power to conduct capture-mark-recapture analyses, yet it is most definitely our objective to pursue the long term research and compare survival rates across the urbanization gradient in the future. In the same vein, a longer monitoring will enable a comparison of recruitment success across urbanization, providing a complementary perspective to our results on fledgling success. Survival data will also be crucial to understand selection pressures acting on urban great tits, and to compare them with selection in more natural habitats.</p>
<p>While the present analysis focused on first broods following classical approaches in the literature, considering second broods in the study of forest and urban reproductive strategies could reveal further divergences. Between 2011 and 2016, 11.6% of Montpellier urban females laid second broods vs. 4.5% in La Rouvi&#x000E8;re forest (along with 20.6 and 23.1% of replacement broods). In our study sites in the city of Montpellier, <italic>Pinus</italic> spp. and the evergreen oak <italic>Quercus ilex</italic> are dominant tree species. In these breeding habitats, later breeding could be favored because the food required to rear nestlings peaks later in the season (Blondel et al., <xref ref-type="bibr" rid="B8">2006</xref>). Also, in such habitats, second clutches can be typically larger than first broods, while the reverse is true in deciduous habitats such as found in La Rouvi&#x000E8;re forest (Lambrechts et al., <xref ref-type="bibr" rid="B42">2008</xref>). Hence a complementary analysis involving both first and second broods might confirm that city birds have adopted a different yet adaptive breeding strategy.</p>
<p>Finally, the colonization of an urban landscape by an avian species is likely to be a long process, possibly leading to a succession of adaptive phenotypes. In line with the general finding that individuals that are superior colonizers are inferior competitors (Yu and Wilson, <xref ref-type="bibr" rid="B83">2001</xref>), it has been suggested that while a proactive fast lifestyle would be favored during the colonization stage of urban habitats (Sol et al., <xref ref-type="bibr" rid="B74">2013</xref>), the higher sensitivity of reactive slow individuals to the environmental conditions might favor them on the long run when facing ecological novelty (Robertson et al., <xref ref-type="bibr" rid="B67">2013</xref>). In the case of such a sequence of colonization, findings regarding the pace-of-life of birds adapted to the urban habitat will depend a. on how advanced the colonization process is, and b. on how much the urban population is isolated from surrounding rural populations. Although Montpellier is a millenary city where great tits have a long history of presence, it is still undergoing a rapid urbanization process, which could explain the high prevalence of bold birds in the most urbanized areas. Also, recent genetic analyses based on genome-wide RAD-sequences have revealed that Montpellier and La Rouvi&#x000E8;re great tits show significant but low genetic differentiation (Perrier et al. in review). Uncovering the direction of gene flow between city and forest, and testing for a source-sink dynamic would reveal whether the city population could be regularly supplied with new, possibly bold, individuals.</p>
<p>Overall, our study shows strong phenotypic divergence between forest and urban great tits, but also across the urbanization gradient. Behavioral and physiological traits suggested that urban birds were on a faster end of the pace-of-life continuum than their forest conspecifics, yet breeding data did not support this conclusion. Further investigations on the plastic vs. genetic origin of the differences revealed here, along with the selection forces on the focal trait, will improve our understanding of how urban life shapes great tit pace-of-life in the future.</p>
</sec>
</sec>
<sec id="s5">
<title>Ethics statement</title>
<p>Capture and ringing was performed under individual ringing permits delivered by the CRBPO and all the protocols involved, including the behavioral assays described below, were approved by the Animal Care and Use Committee Languedoc Roussillon (CEEA-LR-12066) as well as by Regional Institutions (bylaw issued by the Prefecture of Montpellier number 2012167-0003).</p>
</sec>
<sec id="s6">
<title>Author contributions</title>
<p>Conceived study: AC, VD, ML, AG. Collected data: AC, VD, ML, SP, AG. Analyzed videos: VD. Statistical analyses: AC. Wrote the manuscript: AC. Improved the manuscript: VD, ML, AG. Contributed funding and materials: AC, AG.</p>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The handling Editor declared a past collaboration with one of the authors AG and states that the process nevertheless met the standards of a fair and objective review.</p>
</sec>
</sec>
</body>
<back>
<ack>
<p>We thank the many participants to the field monitoring, the City of Montpellier (Direction Paysage et Biodiversit&#x000E9;) and the Zoo de Lunaret for logistic help. We thank Aude Caizergues, Arnaud B&#x000E9;chet, Gabrielle Dubuc Messier, and Denis R&#x000E9;ale for useful discussions.</p>
</ack>
<sec sec-type="supplementary-material" id="s7">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="http://journal.frontiersin.org/article/10.3389/fevo.2017.00053/full#supplementary-material">http://journal.frontiersin.org/article/10.3389/fevo.2017.00053/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Table1.PDF" id="SM1" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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<fn-group>
<fn fn-type="financial-disclosure">
<p><bold>Funding.</bold> This research was supported by a recurrent annual funding from the OSU-OREME and by the European Research Council (Starting grant ERC-2013-StG-337365-SHE to AC).</p>
</fn>
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