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<journal-id journal-id-type="publisher-id">Front. Earth Sci.</journal-id>
<journal-title>Frontiers in Earth Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Earth Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-6463</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
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<article-id pub-id-type="publisher-id">1520846</article-id>
<article-id pub-id-type="doi">10.3389/feart.2025.1520846</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Earth Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Comparison between plant fossil assemblages and simulated biomes across the Permian-Triassic Boundary</article-title>
<alt-title alt-title-type="left-running-head">Ragon et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/feart.2025.1520846">10.3389/feart.2025.1520846</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Ragon</surname>
<given-names>Charline</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2957136/overview"/>
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<contrib contrib-type="author">
<name>
<surname>V&#xe9;rard</surname>
<given-names>Christian</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1153925/overview"/>
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<contrib contrib-type="author">
<name>
<surname>Kasparian</surname>
<given-names>J&#xe9;r&#xf4;me</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
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<contrib contrib-type="author">
<name>
<surname>Nowak</surname>
<given-names>Hendrik</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
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<contrib contrib-type="author">
<name>
<surname>Kustatscher</surname>
<given-names>Evelyn</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/97303/overview"/>
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<contrib contrib-type="author" corresp="yes">
<name>
<surname>Brunetti</surname>
<given-names>Maura</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
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<aff id="aff1">
<sup>1</sup>
<institution>Group of Applied Physics and Institute for Environmental Sciences</institution>, <institution>University of Geneva</institution>, <addr-line>Geneva</addr-line>, <country>Switzerland</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Section of Earth and Environmental Sciences</institution>, <institution>University of Geneva</institution>, <addr-line>Geneva</addr-line>, <country>Switzerland</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>School of Biosciences</institution>, <institution>University of Nottingham</institution>, <addr-line>Nottingham</addr-line>, <country>United Kingdom</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Museum of Nature South Tyrol</institution>, <addr-line>Bolzano</addr-line>, <country>Italy</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/16642/overview">Folco Giomi</ext-link>, University of Rome Tor Vergata, Italy</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2894084/overview">Deborah Woodcock</ext-link>, Clark University, United States</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2895129/overview">Jessie George</ext-link>, Natural History Museum of Los Angeles County, United States</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Maura Brunetti, <email>maura.brunetti@unige.ch</email>
</corresp>
</author-notes>
<pub-date pub-type="epub">
<day>11</day>
<month>03</month>
<year>2025</year>
</pub-date>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<volume>13</volume>
<elocation-id>1520846</elocation-id>
<history>
<date date-type="received">
<day>31</day>
<month>10</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>07</day>
<month>01</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2025 Ragon, V&#xe9;rard, Kasparian, Nowak, Kustatscher and Brunetti.</copyright-statement>
<copyright-year>2025</copyright-year>
<copyright-holder>Ragon, V&#xe9;rard, Kasparian, Nowak, Kustatscher and Brunetti</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Terrestrial ecosystems underwent extreme shifts in composition, following extensive degassing associated with the Siberian Traps near the Permian&#x2013;Triassic boundary (PTB). These climatic perturbations are recorded in land plant macrofossil assemblages, which reflect complex changes in major biomes at the stage level. In this study, we quantitatively compare the major biomes reconstructed from the plant macrofossil assemblage data with those derived from coupled climate&#x2013;vegetation simulations across the PTB. We focus on five stages across the PTB, from the Wuchiapingian to the Anisian. Our findings indicate that a shift from a cold climatic state to one with a mean surface temperature approximately <inline-formula id="inf1">
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</inline-formula>C higher is consistent with observed changes over time in plant biomes, as documented in macrofossil records. In contrast, vegetation patterns during the Induan stage suggest strong variability, precluding a univocal attribution to a stable climate.</p>
</abstract>
<kwd-group>
<kwd>Permian&#x2013;Triassic</kwd>
<kwd>paleobiogeography</kwd>
<kwd>plant fossils</kwd>
<kwd>modeling</kwd>
<kwd>tipping</kwd>
<kwd>climatic shift</kwd>
</kwd-group>
<contract-num rid="cn001">CRSII5 180253</contract-num>
<contract-sponsor id="cn001">Schweizerischer Nationalfonds Zur F&#xf6;rderung der Wissenschaftlichen Forschung<named-content content-type="fundref-id">10.13039/501100001711</named-content>
</contract-sponsor>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Interdisciplinary Climate Studies</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>The Permian&#x2013;Triassic boundary (PTB) mass extinction occurred ca. 252 million years ago and was marked by the most severe biotic crisis in the Phanerozoic (<xref ref-type="bibr" rid="B40">Raup and Sepkoski, 1982</xref>; <xref ref-type="bibr" rid="B49">Stanley, 2016</xref>). Extreme reductions in both marine and terrestrial animals were recorded, most likely caused by extensive degassing associated with the Siberian Traps (<xref ref-type="bibr" rid="B41">Renne and Basu, 1991</xref>; <xref ref-type="bibr" rid="B42">Renne et al., 1995</xref>; <xref ref-type="bibr" rid="B48">Sibik et al., 2015</xref>; <xref ref-type="bibr" rid="B6">Burgess et al., 2017</xref>; <xref ref-type="bibr" rid="B50">Svensen et al., 2018</xref>; <xref ref-type="bibr" rid="B11">Davydov, 2021</xref>; <xref ref-type="bibr" rid="B7">Callegaro et al., 2021</xref>). In the PTB aftermath, life on Earth had to drastically adjust to repeated changes in climate and the carbon cycle for several million years. This crisis in the faunal realm was coeval to complex shifts in composition in terrestrial ecosystems that were not limited to a single event (<xref ref-type="bibr" rid="B26">Looy et al., 2001</xref>; <xref ref-type="bibr" rid="B21">Hochuli et al., 2016</xref>; <xref ref-type="bibr" rid="B46">Schneebeli-Hermann, 2020</xref>). Recent studies show that land plant macro- and microfossil (spores and pollen) records of the Early Triassic do not provide strong evidence for a sudden and catastrophic biodiversity loss coeval with the faunal diversity loss at the PTB (<xref ref-type="bibr" rid="B35">Nowak et al., 2019</xref>). Nonetheless, major changes in regional and global environmental conditions and flora composition occurred throughout the Early Triassic (<xref ref-type="bibr" rid="B21">Hochuli et al., 2016</xref>; <xref ref-type="bibr" rid="B13">Fielding et al., 2019</xref>; <xref ref-type="bibr" rid="B46">Schneebeli-Hermann, 2020</xref>; <xref ref-type="bibr" rid="B33">Mays et al., 2021</xref>; <xref ref-type="bibr" rid="B31">Mays and McLoughlin, 2022</xref>). This includes the abrupt extirpation of the primary coal-forming carbon sinks, such as the <italic>Glossopteris</italic> biome of Gondwana (<xref ref-type="bibr" rid="B32">Mays et al., 2019</xref>; <xref ref-type="bibr" rid="B51">Vajda et al., 2020</xref>; <xref ref-type="bibr" rid="B33">Mays et al., 2021</xref>) and the tropical gigantopterid forests of East Asia at the end of the Permian (<xref ref-type="bibr" rid="B9">Chu et al., 2020</xref>). Shifts between a lycophyte-dominated (spore-producing vascular plants) and a gymnosperm-dominated (seed-producing plants, including conifers) vegetation coincided, respectively, with a succession of warm and cold climatic conditions (<xref ref-type="bibr" rid="B15">Galfetti et al., 2007b</xref>; <xref ref-type="bibr" rid="B46">Schneebeli-Hermann, 2020</xref>). Changes from gymnosperm- to lycophyte-dominated vegetation, as recorded in palynomorph assemblages from subtropical locations, occurred at the PTB and during the earliest Triassic Induan stage (at the Griesbachian&#x2013;Dienerian substage boundary), whereas the shift from lycophyte- to gymnosperm-dominated vegetation occurred in the subsequent Olenekian stage (at the middle-late Smithian boundary), with transient regimes observed before and after this transition. Spores and pollen from higher latitudes record similar changes in relative abundance during the Early Triassic (<xref ref-type="bibr" rid="B20">Hochuli et al., 2010</xref>; <xref ref-type="bibr" rid="B21">Hochuli et al., 2016</xref>).</p>
<p>The macrofossil assemblages described by <xref ref-type="bibr" rid="B35">Nowak et al. (2019)</xref> were later used to reconstruct major biomes (<xref ref-type="bibr" rid="B36">Nowak et al., 2020</xref>), defined as areas with comparable, climatically controlled plant and animal assemblages (<xref ref-type="bibr" rid="B57">Ziegler, 1990</xref>; <xref ref-type="bibr" rid="B54">Walter, 2012</xref>). A reduction in biome diversity from the Permian to the Early Triassic was observed and was associated with a climate shift characterized by an increase in seasonality. This period of high variability was followed by a stable phase that lasted through the Middle Triassic, with comparable biomes from the Olenekian to the Ladinian. Microfossils were excluded from the reconstruction of the biome distribution as their source areas can be vast (regional) and not representative of the depositional site (<xref ref-type="bibr" rid="B36">Nowak et al., 2020</xref>).</p>
<p>The analysis provided by <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref> was performed with a temporal resolution at the stage level from the Wuchiapingian to the Ladinian. In the present paper, we will expand upon this analysis using climate simulations obtained by the offline coupling between a general circulation model (MITgcm) and a vegetation model (BIOME4). The climate simulations were performed using the paleogeographic configuration provided by PANALESIS (<xref ref-type="bibr" rid="B52">V&#xe9;rard, 2019</xref>; <xref ref-type="bibr" rid="B53">V&#xe9;rard, 2021</xref>) for the PTB, as described by <xref ref-type="bibr" rid="B39">Ragon et al. (2024)</xref>. Interestingly, three alternative climatic steady states (denoted as cold, warm, and hot attractors) have been found for the same boundary conditions, with mean surface air temperatures (SATs) ranging from <inline-formula id="inf2">
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</inline-formula>C, as shown in the bifurcation diagram in <xref ref-type="fig" rid="F1">Figure 1</xref> in terms of the atmospheric <inline-formula id="inf4">
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</inline-formula> content. This diagram describes the dynamical backbone structure of the climate system (<xref ref-type="bibr" rid="B16">Ghil and Lucarini, 2020</xref>; <xref ref-type="bibr" rid="B27">Margazoglou et al., 2021</xref>; <xref ref-type="bibr" rid="B4">Brunetti and Ragon, 2023</xref>), showing the stable branches of the steady states, their extent, the position of tipping points, and possible hysteresis paths and tipping mechanisms to shift from one attractor to another (<xref ref-type="bibr" rid="B2">Ashwin et al., 2012</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Permian&#x2013;Triassic paleogeography <bold>(A)</bold> and corresponding bifurcation diagram <bold>(B)</bold> in terms of the equilibrium values of the global mean surface air temperature vs. the atmospheric <inline-formula id="inf5">
<mml:math id="m5">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
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</inline-formula> content (<xref ref-type="bibr" rid="B39">Ragon et al., 2024</xref>). Yellow triangles, red circles, and blue squares represent averages over 100 years for a given forcing value for the hot, warm, and cold attractors, respectively. Black arrows identify the location of coupling simulations between MITgcm and the vegetation model BIOME 4. The vertical dashed line corresponds to 320 ppm, the forcing value at which coupling is performed in the three attractors.</p>
</caption>
<graphic xlink:href="feart-13-1520846-g001.tif"/>
</fig>
<p>The presence of alternative attractors and the structure of the bifurcation diagram in <xref ref-type="fig" rid="F1">Figure 1</xref> suggest a potential explanation for shifts in composition observed in terrestrial ecosystems across the PTB as shifts between attractors. These transitions may have induced strong climatic variations in both atmospheric and oceanic circulations, impacting the whole climate system (<xref ref-type="bibr" rid="B39">Ragon et al., 2024</xref>; <xref ref-type="bibr" rid="B44">Rogger et al., 2024</xref>). Perturbations of the carbon cycle, as a consequence of the outgassing associated with the Siberian Traps, may have triggered not only bifurcation-induced tipping between the cold and hot states, with repeated activation of the hysteresis loop between these two states, but also noise- or rate-induced tipping between the three attractors (<xref ref-type="bibr" rid="B2">Ashwin et al., 2012</xref>; <xref ref-type="bibr" rid="B4">Brunetti and Ragon, 2023</xref>; <xref ref-type="bibr" rid="B12">Feudel, 2023</xref>).</p>
<p>The aim of this paper is to assess whether the changes in global vegetation patterns, as recorded in land&#x2013;plant macrofossil assemblages at the stage level and presented by <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref>, can be explained by tipping between the simulated climatic attractors. We will quantitatively compare the modeled major vegetational biomes for the hot, warm, and cold states with the land&#x2013;plant macrofossil assemblages compiled by <xref ref-type="bibr" rid="B35">Nowak et al. (2019)</xref> and <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref>, spanning from the Lopingian (starting at 259.51 Ma and including the Wuchiapingian and the Changhsingian) to the early Middle Triassic (<inline-formula id="inf6">
<mml:math id="m6">
<mml:mrow>
<mml:mo>&#x223c;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>242 Ma). This corresponds to five stages, namely, Wuchiapingian starting at 259.51 Ma, Changhsingian at 254.14 Ma, Induan at 251.902 Ma, Olenekian at 251.2 Ma, and Anisian at 247.2 Ma (<xref ref-type="bibr" rid="B10">Cohen et al., 2013</xref>).</p>
</sec>
<sec sec-type="methods" id="s2">
<title>2 Methods</title>
<sec id="s2-1">
<title>2.1 Paleogeographic reconstruction</title>
<p>The Permian&#x2013;Triassic paleogeography is derived from PANALESIS (<xref ref-type="bibr" rid="B52">V&#xe9;rard, 2019</xref>; <xref ref-type="bibr" rid="B53">V&#xe9;rard, 2021</xref>), a global plate tectonic model providing maps every 10 Myr from 888 Ma (Tonian) to the present. The PANALESIS paleogeography for the PTB, which we use as a fixed boundary condition in our climate simulations, has proven to be in good agreement with geochemical and paleontological records (<xref ref-type="bibr" rid="B8">Chablais et al., 2011</xref>; <xref ref-type="bibr" rid="B38">Peyrotty et al., 2020</xref>; <xref ref-type="bibr" rid="B5">Bucur et al., 2020</xref>; <xref ref-type="bibr" rid="B25">Le Houedec et al., 2024</xref>), particularly in locating elements within the intertropical zone. The location of island arcs, continental ribbons, and even parts of Pangea, such as South China, remains, however, subject to uncertainties, with latitudes potentially varying up to ca. <inline-formula id="inf7">
<mml:math id="m7">
<mml:mrow>
<mml:mn>10</mml:mn>
<mml:mo>&#xb0;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>. The raw PANALESIS map was adapted to the climate model horizontal resolution of <inline-formula id="inf8">
<mml:math id="m8">
<mml:mrow>
<mml:mn>2.8</mml:mn>
<mml:mo>&#xb0;</mml:mo>
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</inline-formula> (<inline-formula id="inf9">
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</inline-formula> km). Specifically, seaways narrower than a few pixels were enlarged, while the smallest ones, along with epicontinental seas and lakes, were closed. The resulting topography used in the simulations is shown in <xref ref-type="fig" rid="F1">Figure 1A</xref>.</p>
</sec>
<sec id="s2-2">
<title>2.2 Plant fossil records</title>
<p>The study by <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref> was based on a dataset of plant macrofossil assemblages from <xref ref-type="bibr" rid="B35">Nowak et al. (2019)</xref>, which is a compilation of previously published and unpublished plant fossil collections. This dataset is used in the present paper to determine major biomes at the stage level, spanning from the Wuchiapingian to the Anisian. Each plant genus is associated with the major biome(s) it could potentially occur in, possibly exclusively (i.e., when a plant genus is known to be limited to habitats aligned with a certain biome; see <xref ref-type="sec" rid="s11">Supplementary Table S2</xref> in <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref> for details).</p>
<p>The records are aggregated within a moving 100-km radius, where each genus is assigned a weight corresponding to the inverse of the number of major biome(s) it is associated with. For each aggregated assemblage, a vote for all possible biomes is then tallied based on the weights of all present genera. The final major biome is determined based on either <italic>i)</italic> the exclusive major biome if a characteristic representative is present, <italic>ii)</italic> the major biome whose combined weight is <inline-formula id="inf10">
<mml:math id="m10">
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</inline-formula> in the area, or <italic>iii)</italic> the major biome manually assigned by the authors considering taxa, location, and neighborhood (if the combined weight for each calculated biome is <inline-formula id="inf11">
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</mml:math>
</inline-formula>). The resulting major biome distribution, thus, reflects the distribution of all plant macrofossil collections and corresponds to the area with comparable, climatically controlled plant and animal assemblages (<xref ref-type="bibr" rid="B36">Nowak et al., 2020</xref>). This method helps reduce the uncertainty in location and short-scale variability. However, some of the manual biome assignments are tenuous and mainly based on surrounding data points. In these cases, if a single calculated biome is indicated as the most likely one (as opposed to multiple candidates with similar combined weights, each being the case in approximately half of the manual assignments or a quarter of all aggregated assemblages), we use the latter in the present study. This approach aims to keep data points independent without introducing new interpretations.</p>
<p>The classification of major biomes used in this study comprises six categories, which are mostly adapted from those in <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref>, which, in turn, followed the set of biomes introduced by <xref ref-type="bibr" rid="B57">Ziegler (1990)</xref> as far as they could be applied to the fossil dataset at hand. The resulting simplified major biomes are briefly described as follows: the <italic>tropical everwet</italic> major biome includes various vegetation types developing under constantly hot and humid conditions, typically near the equator, but it can extend up to mid-latitudes. The <italic>tropical summerwet</italic> major biome represents intermediate vegetation between <italic>tropical everwet</italic> and <italic>desert</italic>, found in middle to low latitudes with marked seasonality and wet summers. The <italic>desert</italic> major biome includes both subtropical and mid-latitude deserts but is generalized to all latitudes in this study and is marked by water deficiency. The <italic>warm-to-cool temperate</italic> major biome encompasses vegetation ranging from evergreen (i.e., plants that keep their needles or leaves all year) to deciduous (i.e., plants that shed their leaves in autumn), affected by seasonal changes in climatic conditions. The <italic>cold temperate</italic> major biome is associated with areas with low evaporation, where the short growing season is mainly controlled by temperature and sunshine. The <italic>tundra</italic> major biome has a very short growing season and was not recorded by <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref>.</p>
</sec>
<sec id="s2-3">
<title>2.3 Vegetation distribution along the stable branches</title>
<p>The simulated vegetation distribution is different between the three attractors but also varies along each stable branch, together with the atmospheric <inline-formula id="inf12">
<mml:math id="m12">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> content. The range of vegetation pattern on each attractor is determined by applying the asynchronous coupling procedure between the MITgcm and BIOME 4 models, as described in <xref ref-type="sec" rid="s11">Supplementary Appendix SA</xref> at various positions along the branches. This includes a common value of 320 ppm and, in general, at the edges of each branch (see <xref ref-type="fig" rid="F1">Figure 1B</xref>). For the warm state, which has a narrow stable branch, only two positions are selected, at 320 ppm and near the upper edge of the branch (328 ppm). The two models, the climate model MITgcm (<xref ref-type="bibr" rid="B29">Marshall et al., 1997a</xref>; <xref ref-type="bibr" rid="B30">Marshall et al., 1997b</xref>; <xref ref-type="bibr" rid="B1">Adcroft et al., 2004</xref>; <xref ref-type="bibr" rid="B28">Marshall et al., 2004</xref>) and the vegetation model BIOME 4 (<xref ref-type="bibr" rid="B19">Haxeltine and Prentice, 1996</xref>; <xref ref-type="bibr" rid="B23">Kaplan, 2001</xref>; <xref ref-type="bibr" rid="B24">Kaplan et al., 2003</xref>), have been described in the Methods section of <xref ref-type="bibr" rid="B39">Ragon et al. (2024)</xref>. The convergence criteria between MITgcm and BIOME 4 are 1) the global SAT does not change between two iterations (within the uncertainty) and 2) the land surface fraction where albedo varies between two iterations is smaller than 10%. The corresponding values and surface imbalance over the ocean at each iteration of the coupling procedure are reported in <xref ref-type="sec" rid="s11">Supplementary Table S6</xref>.</p>
<p>The biomes resulting from the simulations (28 biomes; see <xref ref-type="bibr" rid="B23">Kaplan, 2001</xref>) are grouped in the same major biomes described in <xref ref-type="sec" rid="s2-2">Section 2.2</xref> to facilitate the comparison with the geological records provided by <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref> and eliminate perturbations coming from small differences between similar biomes. The corresponding classification is described in <xref ref-type="table" rid="T1">Table 1</xref>.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Correspondence between the 28 biomes represented in the BIOME 4 model and the major biomes adapted from <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref> (in italics). Cases 1 and 2 refer to alternative classifications of the temperate forbland biome.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th colspan="2" align="left">Number and name of biomes and major biomes</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td colspan="2" align="left">
<italic>Tropical everwet</italic>
</td>
</tr>
<tr>
<td align="center">1</td>
<td align="left">Tropical evergreen broadleaf forest</td>
</tr>
<tr>
<td colspan="2" align="left">
<italic>Tropical summerwet</italic>
</td>
</tr>
<tr>
<td align="center">2</td>
<td align="left">Tropical semi-evergreen broadleaf forest</td>
</tr>
<tr>
<td align="center">3</td>
<td align="left">Tropical deciduous broadleaf forest and woodland</td>
</tr>
<tr>
<td align="center">12</td>
<td align="left">Tropical savanna</td>
</tr>
<tr>
<td align="center">19</td>
<td align="left">Tropical forbland</td>
</tr>
<tr>
<td colspan="2" align="left">
<italic>Warm-to-cool temperate</italic>
</td>
</tr>
<tr>
<td align="center">4</td>
<td align="left">Temperate deciduous broadleaf forest</td>
</tr>
<tr>
<td align="center">5</td>
<td align="left">Temperate evergreen needleleaf forest</td>
</tr>
<tr>
<td align="center">6</td>
<td align="left">Warm-temperate evergreen broadleaf and mixed forest</td>
</tr>
<tr>
<td align="center">7</td>
<td align="left">Cool mixed forest</td>
</tr>
<tr>
<td align="center">8</td>
<td align="left">Cool evergreen needleleaf forest</td>
</tr>
<tr>
<td align="center">9</td>
<td align="left">Cool-temperate evergreen needleleaf and mixed forest</td>
</tr>
<tr>
<td align="center">15</td>
<td align="left">Temperate sclerophyll woodland and shrubland</td>
</tr>
<tr>
<td align="center">16</td>
<td align="left">Temperate broadleaved savanna</td>
</tr>
<tr>
<td align="center">17</td>
<td align="left">Temperate evergreen needleleaf open woodland</td>
</tr>
<tr>
<td colspan="2" align="left">
<italic>Cold temperate</italic>
</td>
</tr>
<tr>
<td align="center">10</td>
<td align="left">Cold evergreen needleleaf forest</td>
</tr>
<tr>
<td align="center">11</td>
<td align="left">Cold deciduous forest</td>
</tr>
<tr>
<td align="center">18</td>
<td align="left">Boreal parkland</td>
</tr>
<tr>
<td align="center">20</td>
<td align="left">Temperate forbland (case 1)</td>
</tr>
<tr>
<td colspan="2" align="left">
<italic>Desert</italic>
</td>
</tr>
<tr>
<td align="center">13</td>
<td align="left">Tropical xerophytic shrubland</td>
</tr>
<tr>
<td align="center">14</td>
<td align="left">Temperate xerophytic shrubland</td>
</tr>
<tr>
<td align="center">20</td>
<td align="left">Temperate forbland (case 2)</td>
</tr>
<tr>
<td align="center">21</td>
<td align="left">Desert</td>
</tr>
<tr>
<td align="center">27</td>
<td align="left">Barren (at latitudes <inline-formula id="inf148">
<mml:math id="m148">
<mml:mrow>
<mml:mo>&#x3c;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> 40<inline-formula id="inf149">
<mml:math id="m149">
<mml:mrow>
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</mml:mrow>
</mml:math>
</inline-formula>)</td>
</tr>
<tr>
<td colspan="2" align="left">
<italic>Tundra and land ice</italic>
</td>
</tr>
<tr>
<td align="center">22</td>
<td align="left">Graminoid and forb tundra</td>
</tr>
<tr>
<td align="center">23</td>
<td align="left">Low and high shrub tundra</td>
</tr>
<tr>
<td align="center">24</td>
<td align="left">Erect dwarf-shrub tundra</td>
</tr>
<tr>
<td align="center">25</td>
<td align="left">Prostrate dwarf-shrub tundra</td>
</tr>
<tr>
<td align="center">26</td>
<td align="left">Cushion-forb tundra</td>
</tr>
<tr>
<td align="center">27</td>
<td align="left">Barren (at latitudes <inline-formula id="inf150">
<mml:math id="m150">
<mml:mrow>
<mml:mo>&#x2265;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> 40<inline-formula id="inf151">
<mml:math id="m151">
<mml:mrow>
<mml:mo>&#xb0;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>)</td>
</tr>
<tr>
<td align="center">28</td>
<td align="left">Land ice</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>The present-day &#x201c;grassland&#x201d; is replaced by the herbaceous non-graminoid &#x201c;forbland&#x201d; because graminoids only appeared during the Cretaceous&#x2013;Cenozoic (<xref ref-type="bibr" rid="B18">Gradstein and Kerp, 2012</xref>). There is consequently no direct equivalence between simulated grasslands and any fossil assemblage or fossil-based biome from the Permian and Triassic, but we can infer likely correspondences based on the climatic conditions they represent. Both tropical savanna and tropical forbland biomes have been included in the <italic>tropical summerwet</italic> major biome. Even if they slightly differ from the broadleaf forest category, their seasonality has been considered the main argument for their classification. The classification of barren, a desertic biome mainly associated with polar regions in present-day vegetation, is distinguished by the latitude of formation: the <italic>desert</italic> major biome is found below 40<inline-formula id="inf181">
<mml:math id="m181">
<mml:mrow>
<mml:mo>&#xb0;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> latitude, while <italic>tundra</italic> is located above.</p>
<p>The criteria for temperate forbland biome in BIOME 4 correspond to desert-like conditions, more than everwet or seasonally wet. However, our simulations show that this biome is mostly formed in high latitudes, <inline-formula id="inf182">
<mml:math id="m182">
<mml:mrow>
<mml:mo>&#x2273;</mml:mo>
<mml:mn>40</mml:mn>
<mml:mo>&#xb0;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> (see for example gray areas in <xref ref-type="fig" rid="F2">Figure 2</xref>). In polar regions, reduced evaporation gives rise to cold temperate vegetation, allowing it to thrive instead of forming deserts. For that reason, temperate forbland is classified as a <italic>cold temperate</italic> major biome (case 1 in <xref ref-type="table" rid="T1">Table 1</xref>). For completeness, we repeat the same analysis with an alternative interpretation, whereby temperate forbland is classified as a <italic>desert</italic> (case 2 in <xref ref-type="table" rid="T1">Table 1</xref>) in <xref ref-type="sec" rid="s3-4">Section 3.4</xref>.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Comparison of plant fossil assemblages of Wuchiapingian age (259.51&#x2013;254.14 Ma) superposed with major biomes modeled at 320 ppm for the <bold>(A)</bold> hot state and <bold>(B)</bold> cold state.</p>
</caption>
<graphic xlink:href="feart-13-1520846-g002.tif"/>
</fig>
</sec>
<sec id="s2-4">
<title>2.4 Similarity between geological records and modeled biomes</title>
<p>The paleontological record provides local information on vegetation, while the model simulates broader areas, posing a challenge for the direct comparison between the two. Visual comparisons (see example in <xref ref-type="fig" rid="F2">Figure 2</xref>) can offer valuable insights into how well the simulation aligns with the records; however, this approach is not quantitative and does not always provide a clear answer.</p>
<p>Each plant fossil assemblage record is assigned to the model-grid cell corresponding to its location. Although the single outcrops are considered independent, their spatial resolution is sometimes higher than that of the model [i.e., records fall within the same grid cell of <inline-formula id="inf183">
<mml:math id="m183">
<mml:mrow>
<mml:mo>&#x223c;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>(300 km)<sup>2</sup>]. Because typical statistical fluctuations decrease with the square root of the number of observations, each distance is weighted based on the number of similar individual records in the same cell (see <xref ref-type="disp-formula" rid="e2">Equation 2</xref>). This results in the merging of plant fossil assemblages, representing the same biome within the same cell, thereby increasing their confidence. The merging contributes to a reduction in sample sizes <inline-formula id="inf184">
<mml:math id="m184">
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>: from 97 to 56 (Wuchiapingian), 59 to 43 (Changhsingian), 66 to 46 (Induan), 88 to 42 (Olenekian), and 202 to 64 (Anisian). Note that the weight is applied only for the mean distance calculation, whereas for the median, only one record is considered among the identical ones within the same grid cell (see <xref ref-type="sec" rid="s2-5">Section 2.5</xref>).</p>
<p>The similarity between the plant macrofossil record at a given stage and the simulated vegetation distribution of an attractor is estimated as follows. For each reported assemblage of fossil plants, we compute the smallest geodesic distance <inline-formula id="inf185">
<mml:math id="m185">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> to the nearest region where the same major biome has been predicted by the simulation, given by<disp-formula id="e1">
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<mml:mrow>
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</mml:mrow>
</mml:mfenced>
<mml:mo>,</mml:mo>
</mml:mrow>
</mml:math>
<label>(1)</label>
</disp-formula>where <inline-formula id="inf186">
<mml:math id="m187">
<mml:mrow>
<mml:mi>R</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>6371</mml:mn>
</mml:mrow>
</mml:math>
</inline-formula> km is the Earth radius, <inline-formula id="inf187">
<mml:math id="m188">
<mml:mrow>
<mml:mi>&#x3d5;</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> is the latitude, <inline-formula id="inf188">
<mml:math id="m189">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> is the longitude, and indices refer to the position of the fossil record <inline-formula id="inf189">
<mml:math id="m190">
<mml:mrow>
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</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> and the nearest point on the map where the considered major biome is simulated <inline-formula id="inf190">
<mml:math id="m191">
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</mml:mrow>
</mml:math>
</inline-formula>. <xref ref-type="fig" rid="F3">Figure 3</xref> shows an example with a simulation and few paleobotanical records, where arrows correspond to the distance between the record and the nearest cell with the same major biome. We have checked that if the model predicts the same major biome at the position where it has been observed, then the distance is 0 (see the two records without arrow in <xref ref-type="fig" rid="F3">Figure 3</xref>). When a major biome present in the fossil record does not appear in a simulation, the distance is arbitrarily set to the longest possible distance, i.e., the distance between the two poles, <inline-formula id="inf191">
<mml:math id="m192">
<mml:mrow>
<mml:mi>&#x3c0;</mml:mi>
<mml:mo>&#x22c5;</mml:mo>
<mml:mi>R</mml:mi>
<mml:mo>&#x223c;</mml:mo>
<mml:mn>2</mml:mn>
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<mml:mrow>
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</mml:mrow>
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</mml:math>
</inline-formula> m.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Example of the calculation of the smallest geodesic distance between geological records (circles with black contours) and the nearest region where the same major biome has been predicted by the simulation.</p>
</caption>
<graphic xlink:href="feart-13-1520846-g003.tif"/>
</fig>
<p>We define the weighted mean distance <inline-formula id="inf192">
<mml:math id="m193">
<mml:mrow>
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</mml:mrow>
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</mml:mrow>
</mml:mfrac>
<mml:mo>,</mml:mo>
</mml:mrow>
</mml:math>
<label>(2)</label>
</disp-formula>where <inline-formula id="inf899">
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<mml:mrow>
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<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> is given by <xref ref-type="disp-formula" rid="e1">Equation 1</xref> for each observation <italic>i, n</italic> is the sample size, <inline-formula id="inf900"> <mml:math id="m803"> <mml:mrow> <mml:msub> <mml:mrow> <mml:mi>n</mml:mi> </mml:mrow> <mml:mrow> <mml:mi>i</mml:mi> </mml:mrow> </mml:msub>
</mml:mrow> </mml:math> </inline-formula> is the number of co-located identical records, and <inline-formula id="inf901"> <mml:math id="m804"> <mml:mrow> <mml:mfrac> <mml:mrow> <mml:mn>1</mml:mn> </mml:mrow> <mml:mrow> <mml:msqrt> <mml:mrow> <mml:msub> <mml:mrow> <mml:mi>n</mml:mi> </mml:mrow> <mml:mrow> <mml:mi>i</mml:mi> </mml:mrow> </mml:msub> </mml:mrow> </mml:msqrt> </mml:mrow> </mml:mfrac>
</mml:mrow> </mml:math> </inline-formula> is the weight applied to each point. The associated variance <italic>V</italic> is as follows:<disp-formula id="e3">
<mml:math id="m196">
<mml:mrow>
<mml:mi>V</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mo>&#x2211;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:msqrt>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msqrt>
</mml:mrow>
</mml:mfrac>
<mml:mtext>&#x2009;</mml:mtext>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msup>
</mml:mrow>
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mo>&#x2211;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:msqrt>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msqrt>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:mfrac>
<mml:mo>,</mml:mo>
</mml:mrow>
</mml:math>
<label>(3)</label>
</disp-formula>
</p>
</sec>
<sec id="s2-5">
<title>2.5 Statistical tests</title>
<p>The distances <inline-formula id="inf198">
<mml:math id="m201">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> are calculated for each combination of fossil records (for each stage) and simulation (for each attractor and <inline-formula id="inf199">
<mml:math id="m202">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> value), together forming a sample. For a given stage, eight samples corresponding to the eight simulations are available. The one minimizing the mean distance <inline-formula id="inf200">
<mml:math id="m203">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula> (or median distance) is assumed to better represent the vegetation distribution recorded at that stage. The difference between this sample and the others can either be due to <italic>i)</italic> a real difference between the populations from which the samples are drawn or <italic>ii)</italic> sampling fluctuations, meaning that geological records do not permit discrimination between the two simulations. In the first case, the simulation minimizing <inline-formula id="inf201">
<mml:math id="m204">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula> is significantly better at reproducing the recorded vegetation, while in the second case, the data do not allow for the clear determination of which attractor minimizes the distance. To distinguish between these two cases, statistical tests are employed. These tests determine whether the difference between two samples, <inline-formula id="inf202">
<mml:math id="m205">
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> and <inline-formula id="inf203">
<mml:math id="m206">
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>, is significant.</p>
<p>The utilization of several methods (on means and medians), together with the classification of the temperate forbland biome into two different major biomes (cases 1 and 2 in <xref ref-type="table" rid="T1">Table 1</xref>), allows us to test the robustness of the results (see also <xref ref-type="sec" rid="s11">Supplementary Appendix SB</xref>).</p>
<sec id="s2-5-1">
<title>2.5.1 Testing difference between means: <inline-formula id="inf204">
<mml:math id="m207">
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>-test</title>
<p>We assume that the distributions of <inline-formula id="inf205">
<mml:math id="m208">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> follow a normal distribution with mean <inline-formula id="inf206">
<mml:math id="m209">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula> and variance <inline-formula id="inf207">
<mml:math id="m210">
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> (given, respectively, in <xref ref-type="disp-formula" rid="e2">Equations 2</xref>, <xref ref-type="disp-formula" rid="e3">3</xref>) and that our sample is sufficiently large to approximate the variance <inline-formula id="inf208">
<mml:math id="m211">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3c3;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:math>
</inline-formula> of the population distribution by the variance of the sample distribution <inline-formula id="inf209">
<mml:math id="m212">
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>. The deviation from the null hypothesis (i.e., two combinations of a set of fossil records with a simulation, <inline-formula id="inf210">
<mml:math id="m213">
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> and <inline-formula id="inf211">
<mml:math id="m214">
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>, have the same mean: <inline-formula id="inf212">
<mml:math id="m215">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>) can be tested using (<xref ref-type="bibr" rid="B3">Bouyer, 1996</xref>)<disp-formula id="e4">
<mml:math id="m216">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>Z</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:msqrt>
<mml:mrow>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfrac>
<mml:mo>&#x2b;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:msqrt>
</mml:mrow>
</mml:mfrac>
<mml:mo>,</mml:mo>
</mml:mrow>
</mml:math>
<label>(4)</label>
</disp-formula>where <inline-formula id="inf213">
<mml:math id="m217">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> and <inline-formula id="inf214">
<mml:math id="m218">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> are the sample sizes. This quantity can be converted into the probability <inline-formula id="inf215">
<mml:math id="m219">
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> of obtaining a difference equal to or larger than the observed one, according to the null hypothesis. The <inline-formula id="inf216">
<mml:math id="m220">
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>-value is given by<disp-formula id="e5">
<mml:math id="m221">
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>0.5</mml:mn>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>&#x2212;</mml:mo>
<mml:mtext>erf</mml:mtext>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>Z</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msqrt>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msqrt>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
</mml:mfenced>
<mml:mo>,</mml:mo>
</mml:mrow>
</mml:math>
<label>(5)</label>
</disp-formula>where Z<sub>0</sub> is given in <xref ref-type="disp-formula" rid="e4">Equation 4</xref> and <inline-formula id="inf217">
<mml:math id="m222">
<mml:mrow>
<mml:mtext>erf</mml:mtext>
</mml:mrow>
</mml:math>
</inline-formula> is the error function. The null hypothesis is rejected when <inline-formula id="inf218">
<mml:math id="m223">
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mo>&#x3c;</mml:mo>
<mml:mn>5</mml:mn>
<mml:mi>%</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> for the unilateral test. In this study, sample <inline-formula id="inf219">
<mml:math id="m224">
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> always refers to the one minimizing <inline-formula id="inf220">
<mml:math id="m225">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula>, while sample <inline-formula id="inf221">
<mml:math id="m226">
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> is one of the other samples such that <inline-formula id="inf222">
<mml:math id="m227">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3e;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>. The estimated probability answers the following question: is <inline-formula id="inf223">
<mml:math id="m228">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> significantly larger than <inline-formula id="inf224">
<mml:math id="m229">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>? the probability is 50% only if <inline-formula id="inf226">
<mml:math id="m231">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>.</p>
</sec>
<sec id="s2-5-2">
<title>2.5.2 Testing difference between medians: <italic>Mood-test</italic>
</title>
<p>The <inline-formula id="inf227">
<mml:math id="m232">
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>-test on means is based on the hypothesis that the populations follow a normal distribution. An alternative is the Mood-test for medians, a method without any assumption about the shape of the distribution, the only requirement being that the two populations have the same shape (<xref ref-type="bibr" rid="B34">Mood, 1950</xref>; <xref ref-type="bibr" rid="B56">Zar, 2010</xref>). Moreover, the median is less sensitive to outlier values than the mean and thus to the missing biomes in the simulations, for which we arbitrarily set the maximal distance (<inline-formula id="inf228">
<mml:math id="m233">
<mml:mrow>
<mml:mo>&#x223c;</mml:mo>
<mml:mn>2</mml:mn>
<mml:mo>&#x22c5;</mml:mo>
<mml:mn>1</mml:mn>
<mml:msup>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>7</mml:mn>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:math>
</inline-formula> m).</p>
<p>The Mood-test is applied to determine whether the difference in the median value of the distances <inline-formula id="inf229">
<mml:math id="m234">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> for two attractors is significant, the null hypothesis being <inline-formula id="inf230">
<mml:math id="m235">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>m</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>m</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>B</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>. This test consists of 1) the determination of the &#x2018;grand median&#x2019; of the two reunited samples, 2) the construction of the contingency table to count the number of distances <inline-formula id="inf231">
<mml:math id="m236">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> above and below the grand median in each sample, and 3) testing the independence of the two categories through a <inline-formula id="inf232">
<mml:math id="m237">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3c7;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:math>
</inline-formula> test. The test is performed using <monospace>median_test</monospace> from the <monospace>scipy-stats</monospace> Python library.</p>
<p>A 5% threshold is used, as for the <inline-formula id="inf233">
<mml:math id="m238">
<mml:mrow>
<mml:mi>t</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>-test, to reject the null hypothesis. However, for two identical samples, the probability is <inline-formula id="inf234">
<mml:math id="m239">
<mml:mrow>
<mml:mi>p</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>100</mml:mn>
<mml:mi>%</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> since the Mood-test is bilateral.</p>
</sec>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>3 Results</title>
<sec id="s3-1">
<title>3.1 Simulation maps</title>
<p>The simulated distribution of the major biomes corresponding to the attractors at various atmospheric <inline-formula id="inf235">
<mml:math id="m240">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> contents is shown in <xref ref-type="fig" rid="F4">Figure 4</xref>. Tundra, barren, and land ice biomes, which have no correspondence in the macrofossil assemblages, are mostly present in polar regions in the cold and warm states, especially at the northern polar latitudes coinciding with the sea ice extent (<xref ref-type="bibr" rid="B39">Ragon et al., 2024</xref>).</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Distribution of the major biomes (see <xref ref-type="table" rid="T1">Table 1</xref>) for <bold>(A&#x2013;C)</bold> hot, <bold>(D, E)</bold> warm, and <bold>(F&#x2013;H)</bold> cold states, with the atmospheric <inline-formula id="inf236">
<mml:math id="m241">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> content varying, as indicated next to the labels. The white area corresponds to ocean.</p>
</caption>
<graphic xlink:href="feart-13-1520846-g004.tif"/>
</fig>
<p>The simulated major biomes in the cold and warm states (<xref ref-type="fig" rid="F4">Figures 4D&#x2013;H</xref>) are both dominated by <italic>desert</italic> at tropical and subtropical latitudes. Along 60<inline-formula id="inf237">
<mml:math id="m242">
<mml:mrow>
<mml:mo>&#xb0;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> latitude, a band of <italic>warm-to-cool temperate</italic> vegetation is present, whereas in polar regions, <italic>cold temperate</italic> plants are favored and switch into <italic>tundra</italic> when moving poleward. The space occupied by the <italic>tundra</italic> in the northern polar region reduces in favor of <italic>cold temperate</italic> as the atmospheric <inline-formula id="inf238">
<mml:math id="m243">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> content increases along the stable branch. The changes in atmospheric <inline-formula id="inf239">
<mml:math id="m244">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> content mainly affect the biomes in the high latitudes of the northern hemisphere in both attractors. In the southern polar region, the vegetation is largely dominated by temperate forbland (i.e., either <italic>cold temperate</italic> or <italic>desert</italic> major biomes, as discussed in <xref ref-type="sec" rid="s2-3">Section 2.3</xref>).</p>
<p>In the hot state, the <italic>warm-to-cool temperate</italic> major biome is also present but shifted poleward compared to the other attractors, so it dominates in the northern polar region. The southern polar region is occupied by both the <italic>warm-to-cool temperate</italic> major biome and temperate forbland, with the extent of the latter reducing as the atmospheric <inline-formula id="inf240">
<mml:math id="m245">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> content increases (see <xref ref-type="fig" rid="F4">Figures 4A&#x2013;C</xref>). At tropical and subtropical latitudes, <italic>desert</italic> areas are generally present, and plants adapted to <italic>tropical summerwet</italic> and <italic>everwet</italic> environments are well-distributed along the tropics and 50<inline-formula id="inf241">
<mml:math id="m246">
<mml:mrow>
<mml:mo>&#xb0;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula> latitude, respectively. Their extent increases together with the atmospheric <inline-formula id="inf242">
<mml:math id="m247">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> content along the hot-state branch. In general, the increase in atmospheric <inline-formula id="inf243">
<mml:math id="m248">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula> content favors warmer and wetter major biomes: <italic>tropical everwet</italic>/<italic>summerwet</italic> over <italic>desert</italic> in mid-latitudes/tropical regions and <italic>warm-to-cool temperate</italic> over temperate forbland in the southern polar region.</p>
</sec>
<sec id="s3-2">
<title>3.2 Test on the mean values</title>
<p>
<xref ref-type="fig" rid="F5">Figure 5</xref> shows, at the five considered stages, the mean distance <inline-formula id="inf244">
<mml:math id="m249">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula> and associated standard error <inline-formula id="inf245">
<mml:math id="m250">
<mml:mrow>
<mml:msqrt>
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
</mml:msqrt>
</mml:mrow>
</mml:math>
</inline-formula> (green circles and bars, respectively) for each simulation, along with the <inline-formula id="inf246">
<mml:math id="m251">
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>-value. See also <xref ref-type="sec" rid="s11">Supplementary Table S1</xref>.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Weighted-mean and standard deviation of the distances computed between each of the eight simulations and geological records for the five stages. For each stage, the yellow area indicates the simulation minimizing the mean distance. The numbers on the right correspond to the <inline-formula id="inf247">
<mml:math id="m252">
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>-values [%] of the difference between each distribution and the one highlighted in yellow (<xref ref-type="disp-formula" rid="e5">Equation 5</xref>), rounded to a percent. When rounding with 0 digits leads to 0%, the notation <inline-formula id="inf249">
<mml:math id="m254">
<mml:mrow>
<mml:mo>&#x3c;</mml:mo>
<mml:mn>1</mml:mn>
<mml:mi>%</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> is used instead. Gray areas indicate statistically significant differences. In this figure, temperate forbland is included in the <italic>cold temperate</italic> major biome (case 1).</p>
</caption>
<graphic xlink:href="feart-13-1520846-g005.tif"/>
</fig>
<p>For the two oldest stages, the Wuchiapingian and the Changhsingian (Lopingian), the vegetation distribution modeled for the cold state at 320 ppm provides the best match with the fossil records. However, it is not significantly different from the vegetation distribution modeled at other positions on the cold branch or from the warm state. In contrast, the vegetation simulated in the hot state is significantly different, and thus, it is not a good candidate to reproduce the records of these stages.</p>
<p>In the case of the Induan, the hot state at 308 ppm minimizes <inline-formula id="inf250">
<mml:math id="m255">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula> but is not statistically different from any of the other simulated conditions, except for the upper branch of the hot state, which can be excluded. For both the Olenekian and Anisian, the lower part of the hot-state branch, i.e., at 308 ppm and 320 ppm, significantly differs from all the other conditions and better matches the records.</p>
<p>These results suggest a transition from the cold or warm state in the Lopingian to the hot state in the Olenekian, in concordance with the global warming recorded from the Lopingian to the Early Triassic (<xref ref-type="bibr" rid="B43">Retallack, 1999</xref>; <xref ref-type="bibr" rid="B22">Joachimski et al., 2012</xref>). The hot state persists during the Anisian, thus marking the stabilization of the climate system, as recorded, for example, in <inline-formula id="inf251">
<mml:math id="m256">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3b4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>13</mml:mn>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:math>
</inline-formula>C isotopic records (<xref ref-type="bibr" rid="B37">Payne et al., 2004</xref>). The unclear signal during the Induan might be the result of oscillations occurring at smaller temporal scales, as observed in the proxy of temperature <inline-formula id="inf252">
<mml:math id="m257">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3b4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>18</mml:mn>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:math>
</inline-formula>O (<xref ref-type="bibr" rid="B45">Romano et al., 2013</xref>).</p>
</sec>
<sec id="s3-3">
<title>3.3 Test on the median values</title>
<p>The test on medians shows a trend comparable to what is observed for that on means, as shown in <xref ref-type="fig" rid="F6">Figure 6</xref>; <xref ref-type="sec" rid="s11">Supplementary Table S2</xref>. For both the Wuchiapingian and the Changhsingian, the cold state, not statistically different along the branch or from the warm state, has a smaller median and thus matches better with the data, while the hot state has a significantly larger median and thus can be excluded.</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>Whisker plot of the distances computed between each of the eight simulations and geological records for the five stages. For each stage, the yellow area indicates the simulation minimizing the median distance. The numbers on the right correspond to the <inline-formula id="inf253">
<mml:math id="m258">
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>-values [%] of the difference between each distribution and the one highlighted in yellow. When rounding with 0 digits leads to 100% (resp. 0%), the notation <inline-formula id="inf254">
<mml:math id="m259">
<mml:mrow>
<mml:mo>&#x3e;</mml:mo>
<mml:mn>99</mml:mn>
<mml:mi>%</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> (resp. <inline-formula id="inf255">
<mml:math id="m260">
<mml:mrow>
<mml:mo>&#x3c;</mml:mo>
<mml:mn>1</mml:mn>
<mml:mi>%</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>) is used instead. Gray areas indicate statistically significant differences. In this figure, temperate forbland biome is included in the <italic>cold temperate</italic> major biome (case 1).</p>
</caption>
<graphic xlink:href="feart-13-1520846-g006.tif"/>
</fig>
<p>For the Induan, the median in the warm-state simulation with 328 ppm is lower than that for the other simulations and is statistically different from the whole hot state and the lower edge of the cold-state branch.</p>
<p>For the Olenekian and the Anisian, the hot state at 350 ppm minimizes the median but is not significantly different from the same attractor with other atmospheric content of <inline-formula id="inf256">
<mml:math id="m261">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mtext>CO</mml:mtext>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:math>
</inline-formula>. For the Olenekian, the difference with the warm state at 328 ppm is also non-significant. However, in both cases, the hot state differs from the cold state, which can thus be excluded.</p>
</sec>
<sec id="s3-4">
<title>3.4 Robustness of the results against the classification of the temperate forbland biome</title>
<p>The classification of temperate forbland into <italic>cold temperate</italic> is questionable, as discussed in <xref ref-type="sec" rid="s2-3">Section 2.3</xref>. In this study, we test the robustness of the results against the classification of this biome by including it in the <italic>desert</italic> major biome (case 2) instead of <italic>cold temperate</italic> (case 1).</p>
<sec id="s3-4-1">
<title>3.4.1 Case 2: test on the mean values</title>
<p>The statistical analysis of the mean values is shown in <xref ref-type="fig" rid="F7">Figure 7</xref>; <xref ref-type="sec" rid="s11">Supplementary Table S3</xref>. The Wuchiapingian, Changhsingian, and Induan stages show better alignment between the geological records and cold and warm attractors. This tendency was already observed in the Lopingian, with the earlier classification of temperate forbland in the <italic>cold temperate</italic> major biome (case 1). However, the Induan did not display a clear tendency in favor of the hot or cold state in the previous analysis.</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>Same as <xref ref-type="fig" rid="F5">Figure 5</xref>, except that the temperate forbland biome is included in the <italic>desert</italic> major biome (case 2).</p>
</caption>
<graphic xlink:href="feart-13-1520846-g007.tif"/>
</fig>
<p>In contrast, the results for both the Olenekian and Anisian stages do not differentiate the hot from the cold state. Although the minimal <inline-formula id="inf257">
<mml:math id="m262">
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>d</mml:mi>
</mml:mrow>
<mml:mo>&#x304;</mml:mo>
</mml:mover>
</mml:mrow>
</mml:math>
</inline-formula> is observed for the cold-state simulations in both cases, the hot state is not significantly different. For the Olenekian, the cold states with 320 ppm and 332 ppm and the entire hot-state branch cannot be excluded. For the Anisian, the upper cold-state branch and the hot state at 350 ppm match the data comparably well.</p>
<p>Therefore, in the mean test, this alternative classification (case 2) is less effective in distinguishing between the attractors compared to the previous option (case 1).</p>
</sec>
<sec id="s3-4-2">
<title>3.4.2 Case 2: test on the median values</title>
<p>The <inline-formula id="inf258">
<mml:math id="m263">
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula>-values for the test on the medians are reported in <xref ref-type="fig" rid="F8">Figure 8</xref> and detailed in <xref ref-type="sec" rid="s11">Supplementary Table S4</xref>. As for the case with temperate forbland included in the <italic>cold temperate</italic> major biome, the statistical test shows a better matching of the cold and warm states in both the Wuchiapingian and Changhsingian. In this case, the same holds true for the Induan, where the cold state with 304 ppm is also significantly different from the other cold states.</p>
<fig id="F8" position="float">
<label>FIGURE 8</label>
<caption>
<p>Same as <xref ref-type="fig" rid="F6">Figure 6</xref>, except that the temperate forbland biome is included in the <italic>desert</italic> major biome (case 2).</p>
</caption>
<graphic xlink:href="feart-13-1520846-g008.tif"/>
</fig>
<p>For the Olenekian, the hot state with 350 ppm minimizes the median and is comparable to the other positions along the branch. In comparison with the case where temperate forbland is included in the <italic>cold temperate</italic> major biome, the hot state is favored here over the warm state at 328 ppm. For the Anisian, hot states at 320 ppm and 350 ppm match the vegetation pattern and are significantly different from the other simulations.</p>
</sec>
</sec>
</sec>
<sec id="s4">
<title>4 Summary and conclusion</title>
<p>The increasing temperatures observed between the Lopingian and Middle Triassic (<xref ref-type="bibr" rid="B22">Joachimski et al., 2012</xref>) are associated with a transition in the vegetation patterns reported by plant macrofossils (<xref ref-type="bibr" rid="B36">Nowak et al., 2020</xref>). We compared the changes over time in macrofossil assemblages to modeled biomes obtained from a series of climate simulations around the Permian&#x2013;Triassic boundary, which revealed the existence of three alternative steady states with SATs differing by approximately 10<inline-formula id="inf259">
<mml:math id="m264">
<mml:mrow>
<mml:mo>&#xb0;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>C (<xref ref-type="bibr" rid="B39">Ragon et al., 2024</xref>) (see <xref ref-type="fig" rid="F1">Figure 1B</xref>).</p>
<p>The classification of the temperate forbland biome from the BIOME 4 vegetation model is ambiguous; therefore, two cases have been tested by including it either in <italic>cold temperate</italic> or <italic>desert</italic> major biomes. Its classification does not change the results for the Lopingian but has a larger impact on the Early Triassic, for which the presence of the <italic>cold temperate</italic> major biome in hot-state simulations is fully dependent on the assignment of the temperate forbland biome. The outlier values resulting from the absence of the <italic>cold temperate</italic> major biome in the hot-state simulations highly impact the mean values. However, the median is less sensitive to the outliers and, thus, to the classification of a particular biome, making the test on median values more robust and conclusive than the test on mean values.</p>
<p>The overall results are summarized in <xref ref-type="fig" rid="F9">Figure 9</xref> and show that the Lopingian matches well with both the cold and warm states in all tests. The early Middle Triassic (Anisian) is marked by the stabilization of the climate, as reported by <inline-formula id="inf260">
<mml:math id="m265">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3b4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>13</mml:mn>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:math>
</inline-formula>C isotope ratios (<xref ref-type="bibr" rid="B37">Payne et al., 2004</xref>). In our study, the vegetation distribution simulated for the hot state matches the fossil records of both the Anisian and Olenekian, in accordance with the stabilization of the vegetation patterns observed in the macrofossil collection in <xref ref-type="bibr" rid="B36">Nowak et al. (2020)</xref>. The statistical tests show a significant difference between the hot and the warm/cold states, except the test on the mean values when temperate forbland is included in the <italic>desert</italic> major biome (case 2), for which the cold state cannot be completely excluded. This discontinuity, together with the fact that the mean value is more sensitive to outliers, leads us to consider this test as inconsistent and preferentially include the temperate forbland in the <italic>cold temperate</italic> major biome rather than in <italic>desert</italic>.</p>
<fig id="F9" position="float">
<label>FIGURE 9</label>
<caption>
<p>For each stage, the simulations that cannot be excluded from the data are highlighted in blue. The four statistical tests performed are shown from left to right (darker to lighter blue): test on mean and median values for temperate forbland included in the <italic>cold temperate</italic> major biome (case 1) and test on mean and median values for temperate forbland included in the <italic>desert</italic> major biome (case 2).</p>
</caption>
<graphic xlink:href="feart-13-1520846-g009.tif"/>
</fig>
<p>During the Induan, three tests out of four are in favor of a cold or warm state, whereas the remaining one is not conclusive (see <xref ref-type="fig" rid="F9">Figure 9</xref>). Isotope ratios of <inline-formula id="inf261">
<mml:math id="m266">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3b4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>13</mml:mn>
</mml:mrow>
</mml:msup>
<mml:mi>C</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> and <inline-formula id="inf262">
<mml:math id="m267">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3b4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>18</mml:mn>
</mml:mrow>
</mml:msup>
<mml:mi>O</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> recorded oscillations during both the Induan and Olenekian, at shorter timescales than the age resolution considered in this study (<xref ref-type="bibr" rid="B14">Galfetti et al., 2007a</xref>; <xref ref-type="bibr" rid="B45">Romano et al., 2013</xref>; <xref ref-type="bibr" rid="B17">Goudemand et al., 2019</xref>; <xref ref-type="bibr" rid="B55">Widmann et al., 2020</xref>). These oscillations could be responsible for the equivocal signal for one attractor or another in the vegetation patterns of the Induan. However, the concordance of the Olenekian records with the hot state is more robust. Possible explanations for this difference can include <italic>i)</italic> oscillations between the hot and cold states for both the Induan and Olenekian but with more time spent in the hot state during the Olenekian; <italic>ii)</italic> a better preservation of macrofossils due to the (re-)establishment of wet biomes corresponding to the hot attractor; or <italic>iii)</italic> a possible bias in sampling. Sampling biases for the Early Triassic are highly likely, as discussed for example in <xref ref-type="bibr" rid="B35">Nowak et al. (2019)</xref>. An alternative explanation for the unclear signal during the Induan might be related to its duration (<inline-formula id="inf263">
<mml:math id="m268">
<mml:mrow>
<mml:mo>&#x223c;</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>700 kyr), much shorter than the other stages; this shorter timeframe may have prevented the vegetation from stabilizing since <inline-formula id="inf264">
<mml:math id="m269">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3b4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>13</mml:mn>
</mml:mrow>
</mml:msup>
<mml:mi>C</mml:mi>
</mml:mrow>
</mml:math>
</inline-formula> oscillations during this time interval were substantial, and palynological records indicate repeated disruptions affecting the floras during the Early Triassic (e. g.,<xref ref-type="bibr" rid="B21">Hochuli et al., 2016</xref>).</p>
<p>The warm state has a narrow, stable branch and cannot be reached through bifurcation-induced tipping from the other attractors (<xref ref-type="bibr" rid="B39">Ragon et al., 2024</xref>). Moreover, in all conditions, it is indistinguishable from at least one of the other attractors. Thus, it is relevant to focus on the two robust attractors, the hot and cold states, for the interpretation of the results.</p>
<p>In general, the results presented in this study on changes in the vegetation distribution over time suggest a transition from the cold attractor in the Lopingian to the hot attractor in the latest Early Triassic and early Middle Triassic, with a transient phase in the earliest Triassic (Induan) (see <xref ref-type="fig" rid="F10">Figure 10</xref>). This study provides the most direct comparison to date between the Permian&#x2013;Triassic plant fossil assemblages and climate simulations. The possibility of discriminating between attractors at the stage level highlights the relevance of using the multistability framework to describe the climatic variations recorded around the Permian&#x2013;Triassic boundary.</p>
<fig id="F10" position="float">
<label>FIGURE 10</label>
<caption>
<p>Summary of the comparison between the vegetation distribution associated with macrofossil records from the late Permian to the Early Triassic (<xref ref-type="bibr" rid="B36">Nowak et al., 2020</xref>) and the simulated climatic attractors, obtained using an offline coupling between the MITgcm and BIOME4 models, as described by <xref ref-type="bibr" rid="B39">Ragon et al. (2024)</xref>.</p>
</caption>
<graphic xlink:href="feart-13-1520846-g010.tif"/>
</fig>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s5">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s11">Supplementary Material</xref>; further inquiries can be directed to the corresponding author.</p>
</sec>
<sec sec-type="author-contributions" id="s6">
<title>Author contributions</title>
<p>CR: methodology, writing&#x2013;original draft, writing&#x2013;review and editing, formal analysis, and visualization. CV: supervision, validation, and writing&#x2013;review and editing. JK: supervision, validation, writing&#x2013;review and editing, and methodology. HN: validation and writing&#x2013;review and editing. EK: validation and writing&#x2013;review and editing. MB: validation, writing&#x2013;review and editing, conceptualization, funding acquisition, methodology, supervision, and writing&#x2013;original draft.</p>
</sec>
<sec sec-type="funding-information" id="s7">
<title>Funding</title>
<p>The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. We acknowledge the financial support from the Swiss National Science Foundation (Sinergia Project No. CRSII5_180253).</p>
</sec>
<ack>
<p>The authors thank all the Sinergia project members (PaleoC4, <ext-link ext-link-type="uri" xlink:href="https://www.unige.ch/paleoc4/">https://www.unige.ch/paleoc4/</ext-link>) and Emmanuel Castella for useful discussions. The simulations were performed on the Baobab and Yggdrasil clusters at the University of Geneva.</p>
</ack>
<sec sec-type="COI-statement" id="s8">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="ai-statement" id="s9">
<title>Generative AI statement</title>
<p>The author(s) declare that no Generative AI was used in the creation of this manuscript.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/feart.2025.1520846/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/feart.2025.1520846/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet1.pdf" id="SM1" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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