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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Earth Sci.</journal-id>
<journal-title>Frontiers in Earth Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Earth Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-6463</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/feart.2017.00094</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Earth Science</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Palynology and the Ecology of the New Zealand Conifers</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>McGlone</surname> <given-names>Matt S.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/361420/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Richardson</surname> <given-names>Sarah J.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Burge</surname> <given-names>Olivia R.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/486276/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Perry</surname> <given-names>George L. W.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/351066/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Wilmshurst</surname> <given-names>Janet M.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/113857/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Manaaki Whenua-Landcare Research</institution>, <addr-line>Lincoln</addr-line>, <country>New Zealand</country></aff>
<aff id="aff2"><sup>2</sup><institution>School of Environment, University of Auckland</institution>, <addr-line>Auckland</addr-line>, <country>New Zealand</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Jesse L. Morris, University of Utah, United States</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Li Wu, Anhui Normal University, China; Thomas A. Minckley, University of Wyoming, United States</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: Matt S. McGlone <email>mcglonem&#x00040;landcareresearch.co.nz</email></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to Quaternary Science, Geomorphology and Paleoenvironment, a section of the journal Frontiers in Earth Science</p></fn></author-notes>
<pub-date pub-type="epub">
<day>16</day>
<month>11</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="collection">
<year>2017</year>
</pub-date>
<volume>5</volume>
<elocation-id>94</elocation-id>
<history>
<date date-type="received">
<day>03</day>
<month>09</month>
<year>2017</year>
</date>
<date date-type="accepted">
<day>03</day>
<month>11</month>
<year>2017</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2017 McGlone, Richardson, Burge, Perry and Wilmshurst.</copyright-statement>
<copyright-year>2017</copyright-year>
<copyright-holder>McGlone, Richardson, Burge, Perry and Wilmshurst</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract><p>The New Zealand conifers (20 species of trees and shrubs in the Araucariaceae, Podocarpaceae, and Cupressaceae) are often regarded as ancient Gondwanan elements, but mostly originated much later. Often thought of as tall trees of humid, warm forests, they are present throughout in alpine shrublands, tree lines, bogs, swamps, and in dry, frost-prone regions. The tall conifers rarely form purely coniferous forest and mostly occur as an emergent stratum above evergreen angiosperm trees. During Maori settlement in the thirteenth century, fire-sensitive trees succumbed rapidly, most of the drier forests being lost. As these were also the more conifer-rich forests, ecological research has been skewed toward conifer dynamics of forests wetter and cooler than the pre-human norm. Conifers are well represented in the pollen record and we here we review their late Quaternary history in the light of what is known about their current ecology with the intention of countering this bias. During glacial episodes, all trees were scarce south of c. 40&#x000B0; S, and extensive conifer-dominant forest was confined to the northern third of the North Island. Drought- and cold-resistant <italic>Halocarpus bidwillii</italic> and <italic>Phyllocladus alpinus</italic> formed widespread scrub in the south. During the deglacial, beginning 18,000 years ago, tall conifers underwent explosive spread to dominate the forest biomass throughout. Conifer dominance lessened in favor of angiosperms in the wetter western lowland forests over the Holocene but the dryland eastern forests persisted largely unchanged until settlement. Mid to late Holocene climate change favored the more rapidly growing Nothofagaceae which replaced the previous conifer-angiosperm low forest or shrubland in tree line ecotones and montane areas. The key to this dynamic conifer history appears to be their bimodal ability to withstand stress, and dominate on poor soils and in cool, dry regions but, in wetter, warmer locations, to slowly grow thorough competing broadleaves to occupy an exposed, emergent stratum where their inherent stress resistance ensures little effective angiosperm competition.</p></abstract>
<kwd-group>
<kwd>conifer</kwd>
<kwd>history</kwd>
<kwd>New Zealand</kwd>
<kwd>glaciation</kwd>
<kwd>palynology</kwd>
<kwd>Holocene</kwd>
<kwd>ecology</kwd>
<kwd>niche</kwd>
</kwd-group>
<contract-sponsor id="cn001">Ministry for Business Innovation and Employment<named-content content-type="fundref-id">10.13039/501100004629</named-content></contract-sponsor>
<counts>
<fig-count count="11"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="159"/>
<page-count count="23"/>
<word-count count="14152"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>In 1935, Lucy Cranwell&#x02014;a young New Zealand researcher attending the VI International Botanical Congress in Amsterdam&#x02014;was invited to work with Lennart von Post on the pollen analysis of peat sequences collected from southern New Zealand by the Swedish glaciologist Carl Caldenius (Cameron, <xref ref-type="bibr" rid="B14">2000</xref>). Their resulting paper on the postglacial history of the far south of the South Island (Cranwell and von Post, <xref ref-type="bibr" rid="B26">1936</xref>) was the first such effort for Australasia and provided a compelling narrative of vegetation and climate change that was adopted by ecologists and Quaternary researchers alike. Several decades later, palynologist Bill Harris&#x02014;who had worked for Lucy Cranwell&#x02014;asked whether &#x0201C;&#x02026; the two techniques, that of the ecologist, and that of the palynologist can be mutually helpful&#x02026;&#x0201D; (Harris, <xref ref-type="bibr" rid="B41">1963</xref>), and this question remains relevant both in New Zealand and elsewhere (Rull, <xref ref-type="bibr" rid="B129">2010</xref>; Reitalu et al., <xref ref-type="bibr" rid="B120">2014</xref>). Palaeoecology and neoecology often appear to be proceeding on quite different tracks, publishing in different journals and addressing quite separate themes. The purpose of this paper is to address Bill Harris&#x00027;s question with particular emphasis on the history of the New Zealand conifers, and to assess progress in integrating the two disciplines over the 80 years since Lucy Cranwell and Lennart von Post&#x00027;s pioneering publication.</p>
<p>New Zealand conifers offer an excellent opportunity to integrate the rapidly developing understanding of their ecology and biogeography with insights derived from nearly a century of palynological research. The 20 conifer species in New Zealand (Table <xref ref-type="table" rid="T1">1</xref>; Figure <xref ref-type="fig" rid="F1">1</xref>) are represented by three distinct families: Araucariaceae (1 genus, 1 species), Cupressaceae (1 genus, 2 species) and Podocarpaceae (including the synapomorphic Phyllocladaceae; 8 genera, 16 species). Six of the most abundant of the tree conifer species are easily identified by their pollen (Table <xref ref-type="table" rid="T1">1</xref>); many of the conifer species are emergent; and all are wind-pollinated. These traits have resulted in a detailed representation of conifer taxa in the terrestrial and marine pollen records from across the entire geological sequence in New Zealand, allowing the long-term dynamics of conifers to be confidently reconstructed. In contrast, many of the angiosperm trees and shrubs in New Zealand are insect pollinated, have poorly dispersed pollen that is mostly identifiable to genus level, and tend to be under-represented in the pollen records relative to their local abundance (Macphail and McQueen, <xref ref-type="bibr" rid="B66">1983</xref>). The New Zealand conifer pollen records therefore provide an ideal setting to expand understanding of conifer history, biogeography, and ecology.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>New Zealand conifer species: ecological parameters.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>Species</bold></th>
<th valign="top" align="center"><bold>Max height<xref ref-type="table-fn" rid="TN2"><sup>a</sup></xref></bold></th>
<th valign="top" align="center"><bold>Max age<xref ref-type="table-fn" rid="TN3"><sup>b</sup></xref></bold></th>
<th valign="top" align="left"><bold>Dist</bold>.</th>
<th valign="top" align="left"><bold>Alt. range</bold></th>
<th valign="top" align="center"><bold>Moist forest</bold></th>
<th valign="top" align="center"><bold>Dryland forest</bold></th>
<th valign="top" align="center"><bold>Infertile soils</bold></th>
<th valign="top" align="center"><bold>Wetland-wet soils</bold></th>
<th valign="top" align="center"><bold>In alpine ecotone</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>Agathis australis<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></italic></td>
<td valign="top" align="center">40</td>
<td valign="top" align="center">1,700</td>
<td valign="top" align="left">NN</td>
<td valign="top" align="left">L-M</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Libocedrus bidwillii</italic></td>
<td valign="top" align="center">20</td>
<td valign="top" align="center">805</td>
<td valign="top" align="left">N, S</td>
<td valign="top" align="left">M-S</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td/>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Libocedrus plumosa</italic></td>
<td valign="top" align="center">25</td>
<td valign="top" align="center">&#x02013;</td>
<td valign="top" align="left">NN</td>
<td valign="top" align="left">L</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Dacrycarpus dacrydioides<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></italic></td>
<td valign="top" align="center">50</td>
<td valign="top" align="center">775</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-M</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Dacrydium cupressinum<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></italic></td>
<td valign="top" align="center">40</td>
<td valign="top" align="center">1,200</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-M</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Halocarpus bidwillii</italic></td>
<td valign="top" align="center">5</td>
<td valign="top" align="center">280</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-A</td>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Halocarpus biformis</italic></td>
<td valign="top" align="center">10</td>
<td valign="top" align="center">1,000</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-S</td>
<td/>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Halocarpus kirkii</italic></td>
<td valign="top" align="center">25</td>
<td valign="top" align="center">&#x02013;</td>
<td valign="top" align="left">NN</td>
<td valign="top" align="left">L</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Lepidothamnus intermedius</italic></td>
<td valign="top" align="center">15</td>
<td valign="top" align="center">247&#x0002B;</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-S</td>
<td/>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Lepidothamnus laxifolius</italic></td>
<td valign="top" align="center">0.1</td>
<td valign="top" align="center">Clonal</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-A</td>
<td/>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Manoao colensoi<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></italic></td>
<td valign="top" align="center">15</td>
<td valign="top" align="center">800</td>
<td valign="top" align="left">N, S</td>
<td valign="top" align="left">L-M</td>
<td/>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Phyllocladus alpinus</italic></td>
<td valign="top" align="center">12</td>
<td valign="top" align="center">260</td>
<td valign="top" align="left">N, S</td>
<td valign="top" align="left">Mostly M-A</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Phyllocladus toatoa</italic></td>
<td valign="top" align="center">20</td>
<td valign="top" align="center">441</td>
<td valign="top" align="left">NN</td>
<td valign="top" align="left">L-M</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Phyllocladus trichomanoides</italic></td>
<td valign="top" align="center">25</td>
<td valign="top" align="center">&#x0003E;300</td>
<td valign="top" align="left">N, S</td>
<td valign="top" align="left">L-M</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Podocarpus acutifolius</italic></td>
<td valign="top" align="center">10</td>
<td valign="top" align="center">&#x02013;</td>
<td valign="top" align="left">S</td>
<td valign="top" align="left">L-M</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Podocarpus laetus</italic></td>
<td valign="top" align="center">24</td>
<td valign="top" align="center">625</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-S</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Podocarpus nivalis</italic></td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">Clonal</td>
<td valign="top" align="left">N, S</td>
<td valign="top" align="left">M-A</td>
<td/>
<td/>
<td/>
<td/>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Podocarpus totara</italic></td>
<td valign="top" align="center">35</td>
<td valign="top" align="center">1,000</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-S</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Prumnopitys ferruginea<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></italic></td>
<td valign="top" align="center">30</td>
<td valign="top" align="center">770</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-M</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Prumnopitys taxifolia<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></italic></td>
<td valign="top" align="center">30</td>
<td valign="top" align="center">1,400</td>
<td valign="top" align="left">N, S, St</td>
<td valign="top" align="left">L-M</td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td valign="top" align="center"><xref ref-type="table-fn" rid="TN1a"><sup>&#x02022;</sup></xref></td>
<td/>
<td/>
<td/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="TN1">
<label>&#x0002A;</label>
<p><italic>Unique pollen type in New Zealand;</italic></p></fn>
<fn id="TN1a">
<label>&#x02022;</label>
<p><italic>Taxon favors this environment. NN, northern North Island; N, North Island; S, South Island; St, Stewart Island. L, lowland; M, montane; S, subalpine; A, alpine.</italic></p></fn>
<fn id="TN2">
<label>a</label>
<p><italic>McGlone et al. (<xref ref-type="bibr" rid="B86">2010</xref>),</italic></p></fn>
<fn id="TN3">
<label>b</label>
<p><italic>Data from: Wardle (<xref ref-type="bibr" rid="B147">1991</xref>), Ogden and Stewart (<xref ref-type="bibr" rid="B109">1995</xref>) updated by data compiled by the authors for the NZ Plant Traits Database</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>Examples of New Zealand conifer growth forms and habitats. <bold>(a)</bold> <italic>Agathis australis</italic>-dominated forest, Puketi Forest, northern North Island <bold>(b)</bold> alluvial conifer forest on pumice soils with <italic>Prumnopitys taxifolia, P. ferruginea</italic>, and <italic>Dacrycarpus dacrydioides</italic>, Ngaputahi, central North Island <bold>(c)</bold> <italic>Dacrycarpus dacrydioides</italic> swamp forest, Arohaki Lagoon, central North Island <bold>(d)</bold> dryland <italic>Prumnopitys taxifolia</italic> forest with dense divaricating shrub understorey, Isolation Creek, north-eastern South Island <bold>(e)</bold> even-aged, landslide-induced <italic>Libocedrus bidwillii</italic> stand, Ghost Valley, north-west South Island <bold>(f)</bold> <italic>Halocarpus biformis</italic> shrubland at treeline, Hunts Creek, Westland <bold>(g)</bold> shrubby <italic>Halocarpus bidwillii</italic> on frosty, leached terraces, south-west South Island <bold>(h)</bold> prostrate <italic>Podocarpus nivalis</italic>, Kakanui Mountains, south-eastern South Island. All images by the authors except <bold>(h)</bold> from John Barkla sourced under CC-BY-NC from iNaturalist.</p></caption>
<graphic xlink:href="feart-05-00094-g0001.tif"/>
</fig>
<p>Ecological studies of New Zealand conifers have focused on their forest dynamics at small spatial and limited time scales (sub-millennial) although progress has also been made in understanding their physiology, and soil preferences and climate drivers at a national level. In contrast, pollen analytical studies typically address time scales ranging from hundreds to millions of years, are often carried out by researchers with a geological or geographic background, and the major preoccupation has been interpreting pollen sequences in terms of climate or landscape change. This mismatch means integration of ecological and palynological data has been somewhat neglected.</p>
<p>Conifers are abundant in New Zealand forests and shrublands (Ogden and Stewart, <xref ref-type="bibr" rid="B109">1995</xref>). They are found from tree line to the lowlands, from the driest to the wettest regions and from the northern tip of the North Island to Stewart Island in the far south, absent only from some of the offshore islands of the archipelago (Table <xref ref-type="table" rid="T1">1</xref>). They include the tallest tree (50 m) and also sprawling, prostrate shrubs. Many of the conifers are large, emergent trees and often dominate forest biomass. Several (<italic>Agathis australis, Prumnopitys taxifolia, Podocarpus totara, Dacrycarpus dacrydioides</italic>, and <italic>Dacrydium cupressinum</italic>) yield valuable timber, which underpinned the New Zealand economy in the first few decades of European settlement and continued to be exploited until the closing decades of the twentieth century. Understandably, these ubiquitous, dominant and valuable trees have been a focus of biogeographic and ecological research in New Zealand, and debates over their origin, ecological role and, in particular, regeneration dynamics, have continued unabated over the last 120 years.</p>
<p>Leonard Cockayne was the first New Zealand ecologist and, in <italic>The Vegetation of New Zealand</italic> (Cockayne, <xref ref-type="bibr" rid="B21">1928</xref>), formulated ideas about the ecology of the conifers, many of which remain current. However, more controversially, drawing on both ecological and macrofossil evidence he argued that conifer and angiosperm species were locked in a longstanding evolutionary conflict. The historical tendency, as he saw it, was for conifer retreat in the face of angiosperm competition and, although disturbance and poor soils could give them a temporary advantage from time to time, his opinion was that eventually they would become relic: &#x0201C;&#x02026;a remnant merely of ancient conifer forests which have been in the process of gradual extinction by certain broad-leaved dicotyledonous trees&#x02014;a process of extreme slowness&#x0201D; (Cockayne, <xref ref-type="bibr" rid="B21">1928</xref>, p. 21). Cockayne&#x00027;s ideas were championed by Robbins (<xref ref-type="bibr" rid="B125">1962</xref>) who, after a descriptive survey of the conifer-angiosperm forests of the North Island, likewise claimed the angiosperm forest &#x0201C;represents a broadleaf forest climax which is surely replacing a more ancient podocarp forest climax, remnants of which still remain mingled with the broadleaf forest&#x0201D; (p 34). This view has persisted that the conifers and other older broadleaved genera represent an unchanging rainforest element from a Gondwana predating the 80&#x02013;85 Ma separation of the ancestral Zealandia continental fragment (Kirkpatrick and DellaSala, <xref ref-type="bibr" rid="B48">2011</xref>). The popular conservation literature often refers to the conifer-rich lowland forests of New Zealand as &#x0201C;dinosaur forest&#x0201D; (<ext-link ext-link-type="uri" xlink:href="http://www.aucklandbotanicgardens.co.nz/whats-on/events/dinosaurs-in-the-gardens/">http://www.aucklandbotanicgardens.co.nz/whats-on/events/dinosaurs-in-the-gardens/</ext-link>). A recent publication on the fossil history of the Southern Hemisphere rainforests referred to their characteristic taxa as &#x0201C;southern wet forest survivors&#x0201D; (Kooyman et al., <xref ref-type="bibr" rid="B50">2014</xref>), thus emphasizing their antiquity and embattled persistence. It has been claimed that the conifers&#x02014;because of their antiquity and slow adaptation to Pleistocene climates&#x02014;are photosynthetically adapted to function at higher temperatures than are optimal for present day New Zealand (Hawkins and Sweet, <xref ref-type="bibr" rid="B42">1989</xref>). It is not unreasonable to see this presumption of &#x0201C;primitiveness&#x0201D; as implicitly guiding the tenor of much ecological discussion about southern conifers, which becomes focussed on their survival in an &#x0201C;advanced&#x0201D; angiosperm dominated world.</p>
<p>Here we provide an overview of the reaction of New Zealand conifers to climate and landscape transformation during and after the Last Glacial Maximum (LGM), including the impact of recent human arrival and the introduction of fire. We then use this background to explore to what extent the long-term perspective provided by pollen analytical data can shed light on their current ecology and if, the concept of southern conifers as besieged relics is either valid or useful.</p>
</sec>
<sec id="s2">
<title>New Zealand vegetation change over the last 30,000 years</title>
<p>General locations are given in Figure <xref ref-type="fig" rid="F2">2</xref> and Figures <xref ref-type="fig" rid="F3">3</xref>, <xref ref-type="fig" rid="F4">4</xref> and <xref ref-type="fig" rid="F5">5</xref>&#x02013;<xref ref-type="fig" rid="F9">9</xref> provide representative pollen diagrams illustrating the changes discussed. Table <xref ref-type="table" rid="T2">2</xref> summarizes the typical climatic regimes of important conifer-dominant vegetation types in relation to their current and past distributions.</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Localities mentioned in the text. Areas in black, above tree line. Baseline data, Landcare Research.</p></caption>
<graphic xlink:href="feart-05-00094-g0002.tif"/>
</fig>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>Pollen and spore results for representative samples within sites dating to the LGM. In descending order of increasing latitude within broad zones: northern North Island (NNI&#x02013;north of latitude 37&#x000B0; S); southern North Island (SNI&#x02013;south of 37&#x000B0; S but including the overlapping portion of the South Island); western South Island (WSI&#x02013;west of the Southern Alps); eastern South Island (ESI&#x02013;east of the Southern Alps). Pollen sum: all terrestrial types excluding ferns, lycopods, and wetland forbs, rushes, and sedges. After McGlone et al. (<xref ref-type="bibr" rid="B86">2010</xref>).</p></caption>
<graphic xlink:href="feart-05-00094-g0003.tif"/>
</fig>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p>Summary percentage pollen diagrams (sum: all terrestrial types excluding ferns, lycopods and wetland forbs, rushes, and sedges) and site locations.</p></caption>
<graphic xlink:href="feart-05-00094-g0004.tif"/>
</fig>
<fig id="F5" position="float">
<label>Figure 5</label>
<caption><p>Conifer and Nothofagaceae pollen sequences. Kaitaia bog, Northland (Elliot, <xref ref-type="bibr" rid="B35">1998</xref>). Lake Maratoto, Hamilton Basin (McGlone, <xref ref-type="bibr" rid="B69">2001a</xref>). Wairehu, Rotoaira Basin (McGlone and Topping, <xref ref-type="bibr" rid="B78">1977</xref>).</p></caption>
<graphic xlink:href="feart-05-00094-g0005.tif"/>
</fig>
<fig id="F6" position="float">
<label>Figure 6</label>
<caption><p>Conifer and Nothofagaceae pollen sequences (cont.). Eltham Bog, Taranaki (McGlone and Neall, <xref ref-type="bibr" rid="B77">1994</xref>). Reporoa Bog, upland central North Island (Rogers and McGlone, <xref ref-type="bibr" rid="B126">1989</xref>). Lake Poukawa, Hawkes Bay (McGlone, <xref ref-type="bibr" rid="B71">2002</xref>).</p></caption>
<graphic xlink:href="feart-05-00094-g0006.tif"/>
</fig>
<fig id="F7" position="float">
<label>Figure 7</label>
<caption><p>Conifer and Nothofagaceae pollen sequences (cont.). Adelaide Tarn, treeline, Northwest Nelson (Jara et al., <xref ref-type="bibr" rid="B47">2015</xref>). Cass Basin, Kettlehole Tarn, inland Canterbury (McGlone et al., <xref ref-type="bibr" rid="B87">2004</xref>). Okarito bog, central West Coast (Newnham et al., <xref ref-type="bibr" rid="B105">2007</xref>).</p></caption>
<graphic xlink:href="feart-05-00094-g0007.tif"/>
</fig>
<fig id="F8" position="float">
<label>Figure 8</label>
<caption><p>Conifer and Nothofagaceae pollen sequences (cont.). Rubicon River, inland Canterbury (Moar, <xref ref-type="bibr" rid="B93">1973</xref>). Eweburn Bog, Southland (Wilmshurst et al., <xref ref-type="bibr" rid="B155">2002</xref>). Clarks Junction, Otago (McGlone et al., <xref ref-type="bibr" rid="B88">2003</xref>).</p></caption>
<graphic xlink:href="feart-05-00094-g0008.tif"/>
</fig>
<fig id="F9" position="float">
<label>Figure 9</label>
<caption><p>Conifer and Nothofagaceae pollen sequences. Waitutu, Fiordland (Turney et al., <xref ref-type="bibr" rid="B137">2017</xref>). Ajax Bog, Southland (McGlone et al., <xref ref-type="bibr" rid="B88">2003</xref>). Toitoi Flat, Stewart Island (McGlone and Wilson, <xref ref-type="bibr" rid="B80">1996</xref>).</p></caption>
<graphic xlink:href="feart-05-00094-g0009.tif"/>
</fig>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Climate regimes for major conifer associations past and present.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>Climate regime</bold></th>
<th valign="top" align="left"><bold>Characteristic vegetation</bold></th>
<th valign="top" align="left"><bold>Current distribution</bold></th>
<th valign="top" align="left"><bold>Past distribution</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">S: warm, relatively dry, long W: mild, wet</td>
<td valign="top" align="left">Conifer-broadleaved, most tall conifers present, <italic>Agathis</italic> in north</td>
<td valign="top" align="left">Northland, lowland central NI</td>
<td valign="top" align="left">Mid- to late Holocene, NNI</td>
</tr>
<tr>
<td valign="top" align="left">S: mild, moderate to abundant rainfall W: mild, wet</td>
<td valign="top" align="left">Conifer-broadleaved, most tall conifers present, <italic>Dacrydium</italic> and <italic>Dacrycarpus</italic> abundant</td>
<td valign="top" align="left">Western districts of southern NI and SI</td>
<td valign="top" align="left">Early deglacial onwards in west throughout</td>
</tr>
<tr>
<td valign="top" align="left">S: mild, excessively cloudy and humid W: mild, wet</td>
<td valign="top" align="left">Broadleaved canopy trees and tree fern dominant</td>
<td valign="top" align="left">Coastal, damp gullies</td>
<td valign="top" align="left">Coastal far southern districts, early Holocene</td>
</tr>
<tr>
<td valign="top" align="left">S: cool, but with warm clear spells, wet to very wet. Short W: cold</td>
<td valign="top" align="left">Nothofagaceae with subdominant <italic>Phyllocladus alpinus</italic> in places</td>
<td valign="top" align="left">Upper montane and treeline throughout</td>
<td valign="top" align="left">Mid to late Holocene, Northland early postglacial</td>
</tr>
<tr>
<td valign="top" align="left">S: cool, cloudy; moist to very wet. W: mild</td>
<td valign="top" align="left">Conifer scrub, <italic>Phyllocladus alpinus, Halocarpus bidwillii</italic>, and broadleaved scrub</td>
<td valign="top" align="left">Upper montane and treeline in central Southern Alps, Taranaki</td>
<td valign="top" align="left">Widespread in axial ranges early to mid Holocene. Lowland western districts LGM</td>
</tr>
<tr>
<td valign="top" align="left">S: warm, dry. Short W: cold</td>
<td valign="top" align="left">Conifer-broadleaved, dominant <italic>Prumnopitys taxifolia, Podocarpus laetus, Dacrycarpus</italic>. <italic>Kunzea</italic> stands</td>
<td valign="top" align="left">Eastern dryland rainshadow</td>
<td valign="top" align="left">Widespread in early deglacial in North</td>
</tr>
<tr>
<td valign="top" align="left">S: warm, very dry. Short. W: very cold and dry</td>
<td valign="top" align="left"><italic>Phyllocladus alpinus</italic> conifer scrub dominant, small-leaved angiosperm scrub</td>
<td valign="top" align="left">Southeastern SI interior basins and montane slopes</td>
<td valign="top" align="left">Widespread during LGM in NI</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Climate data after Leathwick et al. (<xref ref-type="bibr" rid="B55">2003</xref>). S, summer (January mean temperatures): warm, 18&#x000B0;C&#x0002B;; mild, 18&#x02013;14&#x000B0;C; cool, 13.9&#x02013;10&#x000B0;C; cold, below 10&#x000B0;C. W, winter (July mean temperatures): mild, 8&#x000B0;C&#x0002B;; cool, 8&#x02013;5&#x000B0;C; cold, 4.9&#x02013;0; very cold, below zero. NI, North Island; SI, South Island</italic>.</p>
</table-wrap-foot>
</table-wrap>
<sec>
<title>Last glacial maximum</title>
<p>The LGM (29 to 19 ka) (ka &#x0003D; thousands of calibrated radiocarbon years before 1950 CE) was the coldest period of the present glacial-interglacial cycle (Lorrey et al., <xref ref-type="bibr" rid="B58">2012</xref>). During this period mean annual temperatures fell by 4&#x02013;7&#x000B0;C (Newnham et al., <xref ref-type="bibr" rid="B106">2013</xref>), glaciers advanced throughout the Southern Alps, extending below current sea level in the west. Overall precipitation was lower, perhaps by as much as a third (Alloway et al., <xref ref-type="bibr" rid="B1">1992</xref>) and the prevailing westerly airflow meant that the rain shadow region east of the axial ranges became semiarid. The plains of the interior south-eastern South Island have been described as approximating a polar desert (McIntosh et al., <xref ref-type="bibr" rid="B90">1990</xref>).</p>
<p>Last Glacial Maximum (LGM) pollen sequences (Figure <xref ref-type="fig" rid="F3">3</xref>) show a forested or partly forested northern third of the North Island (above c. latitude 38&#x000B0;). In Northland, although Nothofagaceae were the dominant tree cover (with abundant <italic>Lophozonia menziesii</italic> and <italic>Fuscospora truncata</italic>), tall conifers played an important role, particularly <italic>Dacrydium cupressinum</italic> (Newnham, <xref ref-type="bibr" rid="B100">1992</xref>; Wright et al., <xref ref-type="bibr" rid="B158">1995</xref>; Elliot, <xref ref-type="bibr" rid="B35">1998</xref>; Newnham et al., <xref ref-type="bibr" rid="B101">2017</xref>). From the Auckland Isthmus southwards, tall forest became sparser or confined to the coast while in the central districts of the North Island and the north of the South Island, conifer shrubland to low forest of <italic>Phyllocladus alpinus</italic> and <italic>Halocarpus bidwillii</italic> formed a mosaic with Nothofagaceae forest patches, broadleaved shrubland, and grassland. The western districts of the South Island, even those adjacent to the glacier fronts, had angiosperm shrubland-grassland cover, but also patches of low conifer forest, and sparse stands of tall conifers (Vandergoes et al., <xref ref-type="bibr" rid="B139">2005</xref>). This vegetation type extended to coastal Fiordland in the far south of the mainland (Pickrill et al., <xref ref-type="bibr" rid="B116">1992</xref>). In eastern lowland districts, grassland, low-growing angiosperm shrubland and sparse prostrate shrubs and herbfield were the main cover and conifers of any type were rare or absent over large areas although maintaining a regional presence (Moar, <xref ref-type="bibr" rid="B95">1980</xref>; McGlone, <xref ref-type="bibr" rid="B71">2002</xref>).</p>
</sec>
<sec>
<title>The deglaciation (18 to 11.6 Ka)</title>
<p>A hemispheric warming and rapid retreat of glaciers began at about 17&#x02013;18 ka following the last LGM advance at around 19 ka (Moreno et al., <xref ref-type="bibr" rid="B98">2015</xref>; Darvill et al., <xref ref-type="bibr" rid="B27">2016</xref>). Conifer-angiosperm forest spread in the central and northern North Island from 17 to 14 ka replacing previous forest-scrub-grassland mosaics (Figures <xref ref-type="fig" rid="F4">4</xref>&#x02013;<xref ref-type="fig" rid="F6">6</xref>). For instance, lowland forest expanded in the Auckland Isthmus between 15.5 and 14 ka (Sandiford et al., <xref ref-type="bibr" rid="B130">2002</xref>, <xref ref-type="bibr" rid="B131">2003</xref>; Newnham et al., <xref ref-type="bibr" rid="B105">2007</xref>; Augustinus et al., <xref ref-type="bibr" rid="B3">2011</xref>); at Kaipo Lagoon in the montane North Island, 16.5&#x02013;14 ka (Newnham and Lowe, <xref ref-type="bibr" rid="B102">2000</xref>), in lowland Taranaki at 15 ka (McGlone and Neall, <xref ref-type="bibr" rid="B77">1994</xref>); and at Lake Rotoaira on the montane central Volcanic Plateau 16.5&#x02013;15 ka (McGlone and Topping, <xref ref-type="bibr" rid="B78">1977</xref>, <xref ref-type="bibr" rid="B79">1983</xref>).</p>
<p>In the South Island, stands of forests expanded in what was still a largely grass and shrub covered landscape (Figures <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="fig" rid="F7">7</xref>&#x02013;<xref ref-type="fig" rid="F9">9</xref>). Northwest Nelson saw expansion of conifer forest at around 14.5 ka (Jara et al., <xref ref-type="bibr" rid="B47">2015</xref>), and at Okarito on the west coast, between 15 and 14.5 ka (Vandergoes et al., <xref ref-type="bibr" rid="B139">2005</xref>); at Cass Basin in inland Canterbury, 15.7&#x02013;14.5 ka (McGlone et al., <xref ref-type="bibr" rid="B87">2004</xref>) and at Clarks Junction, eastern South Island, 15.5&#x02013;13.5 ka (McGlone et al., <xref ref-type="bibr" rid="B88">2003</xref>). A minor reversal of this warming trend occurred between 14.5 and 12.9 ka with glacial readvances in the Southern Alps (Darvill et al., <xref ref-type="bibr" rid="B27">2016</xref>). By this time, dense tall conifer forest had occupied all but the driest eastern districts of the North Island and extensive stands were present in the lowland South Island throughout. These early deglacial forest pollen spectra were dominated by <italic>Prumnopitys taxifolia</italic> (Figures <xref ref-type="fig" rid="F5">5</xref>&#x02013;<xref ref-type="fig" rid="F9">9</xref>) but with significant input from <italic>Phyllocladus, Libocedrus</italic> and, in places, the Nothofagaceous <italic>Lophozonia menzesii</italic> and the deciduous angiosperm tree <italic>Plagianthus regius</italic> were common. These trees are all frost-hardy (Bannister, <xref ref-type="bibr" rid="B4">2007</xref>) and can tolerate a certain amount of drought, in sharp contrast to the angiosperms that became abundant in the early Holocene (e.g., <italic>Ascarina, Metrosideros</italic>) (Leathwick and Whitehead, <xref ref-type="bibr" rid="B54">2001</xref>; Hall and McGlone, <xref ref-type="bibr" rid="B40">2006</xref>).</p>
</sec>
<sec>
<title>The holocene</title>
<p>The beginning of the Holocene period at 11.7 ka, marks the transition to true interglacial climates. Warming continued in New Zealand with increasing rainfall in the west, and the period between c. 11 and 8 ka was characterized by a greatly weakened westerly airflow (Shulmeister et al., <xref ref-type="bibr" rid="B132">2004</xref>). The intensely oceanic climate promoted the spread of the small tree <italic>Ascarina lucida</italic> which cannot tolerate dry air or frost (McGlone and Moar, <xref ref-type="bibr" rid="B75">1977</xref>; Martin and Ogden, <xref ref-type="bibr" rid="B68">2005</xref>). A forest dynamic model was used to explore the climatic implications of a deglacial-Holocene pollen sequence from a montane rainfall spill-over area of the Southern Alps. Warmer than present winters, somewhat cooler summers, and less but more evenly spread rainfall were predicted for the early Holocene (McGlone et al., <xref ref-type="bibr" rid="B87">2004</xref>).</p>
<p>In northern districts of the North Island, and western districts throughout, conifer forests with abundant <italic>Dacrydium cupressinum, Prumnopitys ferruginea</italic>, and <italic>Dacrycarpus dacrydioides</italic> and tree ferns dominated (Figures <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="fig" rid="F5">5</xref>). In rain-shadow eastern districts <italic>Prumnopitys taxifolia</italic> and <italic>Podocarpus</italic> spp. spread in lowland to montane locations (McGlone, <xref ref-type="bibr" rid="B71">2002</xref>; McGlone et al., <xref ref-type="bibr" rid="B87">2004</xref>), but low forest of <italic>Phyllocladus alpinus</italic> and <italic>Halocarpus bidwillii</italic> occupied the drier, frosty inland basins and hill slopes (McGlone and Moar, <xref ref-type="bibr" rid="B76">1998</xref>). Stewart Island at the far south of the South Island was the last region where lowland conifers spread (Figures <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="fig" rid="F9">9</xref>, Toitoi). The early postglacial forests on Stewart Island were entirely dominated by broadleaved angiosperms and tree ferns. Although Stewart Island was connected to the mainland well into the early postglacial, neither Nothofagaceae nor <italic>Phyllocladus alpinus</italic>, both abundant on the adjacent mainland, are present on the island, suggesting climatic factors or climate-moderated competition prevented their establishment while land connections existed.</p>
</sec>
<sec>
<title>The mid to late holocene</title>
<p>The intensely oceanic climates of the early Holocene gave way from 8 ka onwards to more seasonal regimes characterized by longer, cooler winters and shorter, but warmer, summers. Increased south-westerly wind flow over New Zealand brought increased winter rainfall (McGlone et al., <xref ref-type="bibr" rid="B87">2004</xref>). This increased seasonality strongly favored some trees over others. In the far North, it is only post 8 ka that <italic>Agathis australis</italic>&#x02014;the giant Araucarian forest dominant (Figure <xref ref-type="fig" rid="F1">1</xref>)&#x02014;becomes universally common in the pollen rain (Ogden et al., <xref ref-type="bibr" rid="B112">1992</xref>) at about the same time that <italic>Prumnopitys taxifolia, Podocarpus</italic> spp., <italic>Phyllocladus</italic> spp., and <italic>Libocedrus plumosa</italic> became also more prominent (Elliot, <xref ref-type="bibr" rid="B35">1998</xref>; Newnham, <xref ref-type="bibr" rid="B99">1999</xref>; Elliot et al., <xref ref-type="bibr" rid="B36">2005</xref>) (Figure <xref ref-type="fig" rid="F5">5</xref>). Some caution is needed in interpreting <italic>Agathis</italic> fossil records as pollen and macrofossil occurrences may not match because of differential preservation, and thus fluctuations during the mid to late Holocene may simply reflect changing wetland watertables (D&#x00027;Costa et al., <xref ref-type="bibr" rid="B28">2009</xref>). In the very far southern Stewart Island, the conifers <italic>Dacrydium cupressinum, Prumnopitys ferruginea, Halocarpus biformis</italic>, and <italic>Lepidothamnus</italic> spp. began their spread into the previously dominant <italic>Metrosideros</italic>-<italic>Weinmannia</italic> broadleaf forests from about 6 ka onwards (McGlone and Wilson, <xref ref-type="bibr" rid="B80">1996</xref>; Figure <xref ref-type="fig" rid="F9">9</xref>). On the adjacent south-eastern South Island mainland, <italic>Phyllocladus</italic> and <italic>Podocarpus</italic> low forest occupied the dry interior basin-and-range country only after 8 ka (McGlone et al., <xref ref-type="bibr" rid="B83">1995</xref>, <xref ref-type="bibr" rid="B85">1997</xref>).</p>
<p>The mid to late Holocene saw spread of Nothofagaceae in most districts (McGlone et al., <xref ref-type="bibr" rid="B84">1996</xref>). There are two exceptions. The Northland Peninsula and the Auckland Isthmus had extensive Nothofagaceae forest, mostly <italic>Fuscospora truncata</italic> and <italic>Lophozonia menziesii</italic> during the LGM and early postglacial but this was replaced during the early Holocene by <italic>Agathis</italic>-podocarp-broadleaved communities (Elliot, <xref ref-type="bibr" rid="B35">1998</xref>; Newnham et al., <xref ref-type="bibr" rid="B101">2017</xref>). <italic>Lophozonia menziesii</italic> formed part of the lowland deglacial forests in the central North Island but was eliminated before the beginning of the Holocene by conifer-broadleaved forests (Newnham et al., <xref ref-type="bibr" rid="B103">1989</xref>, <xref ref-type="bibr" rid="B104">1999</xref>; Alloway et al., <xref ref-type="bibr" rid="B1">1992</xref>). Nothofagaceae at the LGM occurred only in scattered patches in the far south but had a more substantial presence in coastal areas of the north-west of the South Island (Marra and Leschen, <xref ref-type="bibr" rid="B67">2004</xref>). <italic>Fuscospora</italic> spread appears to have started more-or-less synchronously throughout the uplands of the central and southern North Island and northern South Island during the early Holocene (Figures <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="fig" rid="F6">6</xref>&#x02013;<xref ref-type="fig" rid="F9">9</xref>). <italic>Fuscospora</italic> forests are currently the most common cover of the uplands and axial ranges of the central and southern North Island and northern South Island, but only became treeline dominants from about 9 to 3 ka, depending on the site (Rogers and McGlone, <xref ref-type="bibr" rid="B126">1989</xref>; McGlone et al., <xref ref-type="bibr" rid="B84">1996</xref>; Jara et al., <xref ref-type="bibr" rid="B47">2015</xref>). <italic>Fuscospora cliffortioides</italic>&#x02014;the most abundant tree line forest tree&#x02014;almost invariably spread into pre-existing alpine forests and shrubland of <italic>Libocedrus bidwillii, Phyllocladus alpinus</italic>, and <italic>Halocarpus</italic> spp.</p>
<p><italic>Lophozonia</italic> spread after c. 7&#x02013;6 ka across the south of the South Island in widely separated areas mainly upland treeline sites, but including montane-lowland conifer-broadleaved forest (McGlone et al., <xref ref-type="bibr" rid="B88">2003</xref>). Where <italic>Lophozonia</italic> took part in these mid to late Holocene successions in lowland to lower montane settings, it mostly spread into conifer-broadleaved forest where <italic>Prumnopitys ferruginea</italic> or <italic>Dacrydium cupressinum</italic> were abundant (see Eweburn, Figure <xref ref-type="fig" rid="F8">8</xref>). In these lowland-montane sites, <italic>Fuscospora</italic> spp. follow the initial invasion or spread by <italic>Lophozonia</italic>.</p>
</sec>
<sec>
<title>Late holocene and polynesian fire</title>
<p>Fire occurred frequently on the large, raised restiad bogs of northern New Zealand (Newnham, <xref ref-type="bibr" rid="B100">1992</xref>; Battersby et al., <xref ref-type="bibr" rid="B5">2017</xref>; Haenfling et al., <xref ref-type="bibr" rid="B38">2017</xref>) but elsewhere was sporadic. Along the rain-shadow regions in the ranges to the east of the Southern Alps fires burnt from time to time, inducing a patchy landscape of conifer low forest, shrubland and grassland (Burrows et al., <xref ref-type="bibr" rid="B13">1993</xref>; Burrows, <xref ref-type="bibr" rid="B12">1996</xref>; Wardle, <xref ref-type="bibr" rid="B149">2001b</xref>; Pugh and Shulmeister, <xref ref-type="bibr" rid="B119">2010</xref>). Fire frequency may have increased at around 3 ka in some eastern parts of the North and South Islands but was still infrequent (McGlone and Moar, <xref ref-type="bibr" rid="B76">1998</xref>; Ogden et al., <xref ref-type="bibr" rid="B110">1998</xref>; Horrocks et al., <xref ref-type="bibr" rid="B46">2001</xref>; Woodward et al., <xref ref-type="bibr" rid="B157">2014</xref>). Few New Zealand woody plants have significant adaptations to fire (Perry et al., <xref ref-type="bibr" rid="B113">2014</xref>) and conifers in particular appear to be highly vulnerable to fire. A notable exception is <italic>Halocarpus bidwillii</italic>, which has thick bark and can recover through basal resprouting after fire (Wardle, <xref ref-type="bibr" rid="B147">1991</xref>). Polynesian fires beginning in the late thirteenth century, ultimately removed about 40% of the montane and lowland forest cover (McWethy et al., <xref ref-type="bibr" rid="B91">2010</xref>; Perry et al., <xref ref-type="bibr" rid="B113">2014</xref>). This forest loss was concentrated among conifer-rich lowland forests where c. 30% of this type was lost in the North Island, and nearly 90% in the South Island (Perry et al., <xref ref-type="bibr" rid="B114">2012a</xref>). Some offshore islands were thought never to have had conifer forest, but pre-Polynesian pollen sequences have demonstrated that they did (Wilmshurst et al., <xref ref-type="bibr" rid="B156">2014</xref>).</p>
</sec>
</sec>
<sec id="s3">
<title>A glacial-interglacial perspective on the environmental niche of the New Zealand conifers</title>
<sec>
<title>Ecological niche</title>
<p>An outline of the ecological niche of the conifers has been given in Table <xref ref-type="table" rid="T1">1</xref>, and in Table <xref ref-type="table" rid="T2">2</xref> we summarize how the changing climate and seasonality over a glacial-interglacial cycle has shifted the distribution of broadly defined conifer vegetation groupings. The loss of 80% of New Zealand&#x00027;s lowland forests since human settlement, along with nearly all the forest from rain shadow eastern districts, has left wet conifer-broadleaved forests and montane to alpine Nothofagaceae dominant forests as the most common forest types. Our understanding of their niches derives mainly from ecological observations made in dense, wet forests&#x02014;which do not fully cover the environmental range of most of the species&#x02014;and correlations between environmental variables and their abundance in these same forests. Nevertheless, a number of statements can be made about New Zealand conifer ecological niches (see Coomes and Bellingham, <xref ref-type="bibr" rid="B24">2011</xref>) which are likely to be robust.</p>
<p>New Zealand conifers are slow growing and long-lived in comparison with competing angiosperms (Ogden and Stewart, <xref ref-type="bibr" rid="B109">1995</xref>) and markedly taller. Despite conifers making up only 8% of the tree flora, 33% of the trees growing 20 m or more in height are conifers. As a group, the conifers are markedly frost-tolerant, most resisting frosts of &#x02212;7&#x000B0;C or more, and the three most frost-tolerant trees and shrubs in the flora (<italic>Halocarpus bidwillii, Phyllocladus alpinus</italic>, and <italic>Podocarpus nivalis</italic>) are conifers (Bannister, <xref ref-type="bibr" rid="B4">2007</xref>). With regard to low rainfall and drought, <italic>Prumnopitys taxifolia, Podocarpus laetus</italic> (formerly <italic>P. hallii</italic>), <italic>P. totara</italic>, and <italic>Dacrycarpus dacrydioides</italic> are among a small group of trees singled out as currently having their maximum abundance under wet climate regimes, but also being capable of tolerating dry, warm lowland sites (Leathwick and Whitehead, <xref ref-type="bibr" rid="B54">2001</xref>). <italic>Agathis australis</italic>, grows best under drier summer conditions and can tolerate severe drought (Macinnis-Ng et al., <xref ref-type="bibr" rid="B65">2016</xref>). In particular, these species can tolerate low atmospheric deficits. <italic>Dacrydium cupressinum</italic> and <italic>Prumnopitys ferruginea</italic> are, on the other hand, far less tolerant of both dry soils and atmospheric deficits. Some species have an ambiguous relationship to drought: <italic>Dacrycarpus dacrydioides</italic> can tolerate warm, dry lowland situations (Leathwick and Whitehead, <xref ref-type="bibr" rid="B54">2001</xref>) but physiological measures show it has a very low tolerance of water deficit (Brodribb and Cochard, <xref ref-type="bibr" rid="B8">2009</xref>) and remaining stands are often associated with wet soils (Figure <xref ref-type="fig" rid="F1">1</xref>).</p>
<p>New Zealand conifers are generally regarded as being tolerant of poor soils (Coomes and Bellingham, <xref ref-type="bibr" rid="B24">2011</xref>; de Jonge et al., <xref ref-type="bibr" rid="B29">2012</xref>), and have an affinity for leached, low nutrient, acid or poorly drained soils that form in ever-wet environments and some (<italic>Dacrydium cupressinum, Dacrycarpus dacrydioides, Lepidothamnus intermedius, Manoao colensoi, Libocedrus plumosa, Halocarpus bidwillii, H. biformis</italic>) are characteristic of such sites (Richardson et al., <xref ref-type="bibr" rid="B123">2005b</xref>). Where the climate supports tall trees, conifers usually dominate the tree biomass as there are only three tall angiosperm trees that tolerate wetlands (<italic>Elaeocarpus hookerianus, Laurelia novae-zelandiae</italic> and <italic>Syzygium maire</italic>; McGlone, <xref ref-type="bibr" rid="B72">2009</xref>). Pollen diagrams confirm this and peat sites usually show conifer sequences with <italic>Dacrycarpus dacrydiodes</italic> at the fertile, often swamp or lagoon beginning of the sequence, and <italic>Dacrydium cupressinum, Manaoa colensoi, Lepidothamnus intermedius</italic>, and <italic>Halocarpus bidwillii</italic> at the infertile bog later stages (McGlone, <xref ref-type="bibr" rid="B72">2009</xref>). However, in some situations conifers are quick to colonize fertile soils after disturbance, losing ground to angiosperm broadleaves as the succession proceeds, and this is most apparent in the pollen record after large-scale volcanic disturbance (Wilmshurst and McGlone, <xref ref-type="bibr" rid="B154">1996</xref>; Horrocks and Ogden, <xref ref-type="bibr" rid="B45">1998</xref>) but it also occurs after smaller scale disturbances (Bray, <xref ref-type="bibr" rid="B7">1989</xref>; Carswell et al., <xref ref-type="bibr" rid="B16">2007</xref>; de Jonge et al., <xref ref-type="bibr" rid="B29">2012</xref>).</p>
<p>This tolerance of frost, drought, dry air and low nutrient or water-saturated soils can to a certain extent be attributed to their narrow, embolism-resistant tracheids, conservative hydraulic systems and thick, narrow leaves which lead to slow growth relative to competing angiosperms but much greater stress tolerance of poor soils, cold and drought (Sperry et al., <xref ref-type="bibr" rid="B134">2006</xref>). This combination of attributes is the key to conifer niche over both long and short timescales. Despite slow growth rates, longevity ensures that the crowns of New Zealand forest conifers eventually rise well above the continuous lower broadleaved canopy. They therefore spend most of their life span with their crowns exposed to high solar radiation, higher wind speeds and low humidity which induce a drying effect exacerbated by the physiological water transport stress that scales with height (Koch et al., <xref ref-type="bibr" rid="B49">2004</xref>). For instance, tropical emergent trees transpire most of the water used in the forest they form part of (Kunert et al., <xref ref-type="bibr" rid="B51">2017</xref>). A second, related fact is that New Zealand conifers within a conifer/broadleaf tract are often most abundant on ridges and steeper slopes exposing their canopies to windier, less humid conditions and drier soils. Just a handful of tall angiosperms compete in this supracanopy emergent space (e.g., <italic>Laurelia novae-zelandiae, Metrosideros robusta, Knightia excelsa, Fuscospora fusca</italic>, and <italic>F. truncata</italic>), and it has been argued that the angiosperm and conifer components of the forests they co-occur in are largely independent of each other (Ogden, <xref ref-type="bibr" rid="B108">1985</xref>; Lusk, <xref ref-type="bibr" rid="B60">2002</xref>).</p>
</sec>
<sec>
<title>Regeneration</title>
<p>New Zealand conifers have long been believed to face severe regeneration problems (Cockayne, <xref ref-type="bibr" rid="B21">1928</xref>; Holloway, <xref ref-type="bibr" rid="B44">1954</xref>; Robbins, <xref ref-type="bibr" rid="B125">1962</xref>; Wardle, <xref ref-type="bibr" rid="B146">1963</xref>; Veblen and Stewart, <xref ref-type="bibr" rid="B140">1982</xref>; Smale et al., <xref ref-type="bibr" rid="B133">2016</xref>). Most are bird-dispersed and dispersal seems not a critical issue. The wind-dispersed <italic>Agathis australis</italic> and <italic>Libocedrus</italic> spp. appear to have more limitations, and the montane to alpine <italic>Libocedrus bidiwillii</italic> has a markedly discontinuous distribution (Wardle, <xref ref-type="bibr" rid="B145">2011</xref>), but even so they regenerate well after disturbance (Veblen and Stewart, <xref ref-type="bibr" rid="B140">1982</xref>; Steward and Beveridge, <xref ref-type="bibr" rid="B135">2010</xref>). The essential problem faced by the conifers in lowland forests is establishment in openings that quickly fill with tree ferns and fast-growing and/or vegetatively resprouting angiosperm trees. This difficulty is compounded by conifers rarely recruiting under closed canopies (Ogden and Stewart, <xref ref-type="bibr" rid="B109">1995</xref>). A marked feature of most New Zealand conifers is distinct juvenile foliage or growth forms (Dorken and Parsons, <xref ref-type="bibr" rid="B33">2016</xref>)&#x02014;most strikingly with the divaricate branched juvenile <italic>Prumnopitys taxifolia</italic>, the drooping foliage of <italic>Dacrydium cupressinum</italic> and the pyramidal &#x0201C;ricker&#x0201D; juvenile of <italic>Agathis australis</italic>. It is at least plausible that these monopodial juvenile growth forms compensate for slow biomass accumulation by favoring a single stem axis while the often elongated, planar or dispersed leaves maximize photosynthesis in a complex light environment. Although the New Zealand conifers are generally considered to be shade-intolerant (Cameron, <xref ref-type="bibr" rid="B15">1954</xref>; Ebbett and Ogden, <xref ref-type="bibr" rid="B34">1998</xref>), experimental studies suggest that this intolerance varies between taxa. Lusk et al. (<xref ref-type="bibr" rid="B62">2009</xref>) report little relationship between light availability and seedling presence of <italic>Dacrydium cupressinum</italic> and <italic>Prumnopitys ferruginea</italic> in forest stands in the central North Island. Observations in a northern North Island conifer-broadleaved forest showed that while the conifers had much the same shade tolerance as their angiosperm competitors, they grew more slowly and it was only at forest edges that their greater stress tolerance allowed them to overcome this regeneration handicap (Lusk et al., <xref ref-type="bibr" rid="B63">2015</xref>). Conifer regeneration in drier regions is poorly known. However, we can postulate that drier, relatively infertile sites have sparser understoreys and ground-layers, providing better opportunities for conifer regeneration (Wardle, <xref ref-type="bibr" rid="B146">1963</xref>; Burns and Leathwick, <xref ref-type="bibr" rid="B10">1996</xref>) and the greater stress tolerance of the adult trees permit them to dominate.</p>
<p>John Ogden proposed an influential model in which successive generations of conifers form a lesser proportion of a conifer-broadleaved forest due to recruitment difficulties until a large-scale disturbance resets the forest with thickly stocked conifer stands (Ogden, <xref ref-type="bibr" rid="B108">1985</xref>). Some recent data suggests higher conifer mortality and slower replacement in central North Island forests affected by volcanic eruptions consistent with this model (Smale et al., <xref ref-type="bibr" rid="B133">2016</xref>), but complexities of forest history make sweeping generalizations inadvisable. For instance, broad scale analyses of North Island forests have shown some of the largest conifers have lower mortality rates than angiosperm trees (Richardson et al., <xref ref-type="bibr" rid="B124">2009</xref>), and selective logging of conifers from wide tracts of conifer-broadleaved communities has given rise to anomalous contemporary patterns with virtually no regeneration in some areas (driven by absence of conifer seed sources) vs. massive regeneration in others (Carswell et al., <xref ref-type="bibr" rid="B16">2007</xref>).</p>
<p>The pollen record seems to only detect the very largest of disturbances because of its typically large spatial and temporal scales. Once these are factored in, there appears to be little overall trend in conifer-broadleaved forest toward angiosperm dominance. There is little signal in the deglacial and Holocene pollen record from extant conifer-broadleaved tracts that conifers have ever been reduced to low levels (Figures <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="fig" rid="F5">5</xref>&#x02013;<xref ref-type="fig" rid="F9">9</xref>). During the first few thousand years of conifer spread during the deglacial period, conifer pollen input appears to have been higher than subsequently: most sites show this period of great conifer abundance did not last. However, in those areas that have remained under conifer-broadleaved forests throughout the Holocene, the conifers appear to have always been abundant. There is one exception. During the late deglacial-early Holocene period, coastal southern South Island and Stewart Island appear to have had a broadleaved-tree fern community with <italic>Weinmannia racemosa</italic> and <italic>Metrosideros umbellata</italic> prominent members, and conifers all but excluded for an extended period (Pickrill et al., <xref ref-type="bibr" rid="B116">1992</xref>; McGlone and Wilson, <xref ref-type="bibr" rid="B80">1996</xref>). Conifer dominance was not established until well into the mid Holocene (Figure <xref ref-type="fig" rid="F9">9</xref>). This island has extremely oceanic climate by global standards (Meurk, <xref ref-type="bibr" rid="B92">1984</xref>) which the low insolation, warm winter-cool summer regime of the early Holocene intensified. The conifer strategy, which relies, in the absence of landscape-level disturbance, on environmental conditions unfavorable to angiosperms to regenerate well, was negated. A recent parallel at a more local level may be found in some fertile, dark, moist gullies where tree ferns, palms and broadleaves appear to permanently exclude conifer regeneration.</p>
</sec>
<sec>
<title>Conifers and drylands</title>
<p>New Zealand conifers extend into semi-arid areas (rainfall &#x0003C;500 mm a<sup>&#x02212;1</sup>) and were dominant across a wider &#x0201C;dryland&#x0201D; (Penman deficit &#x02265; 270 mm a<sup>&#x02212;1</sup>) region (Figure <xref ref-type="fig" rid="F10">10</xref>) mainly to the east of the axial ranges that made up some 19% of the land area of New Zealand prior to human settlement in the thirteenth century (Rogers et al., <xref ref-type="bibr" rid="B128">2005</xref>). Because dryland conifer forest was largely destroyed by Polynesian fires (Perry et al., <xref ref-type="bibr" rid="B115">2012b</xref>) little is known about its ecology. Figure <xref ref-type="fig" rid="F11">11</xref> shows how human clearances have reduced the representation of current forests to vestigial levels in areas with less than about 900 mm a<sup>&#x02212;1</sup> rainfall, and how conifers dominated the pre-deforestation pollen rain in this dryland zone. The pre-deforestation extension of taxa, such as <italic>Dacrycarpus dacrydioides, Halocarpus, Podocarpus, Phyllocladus</italic>, and <italic>Prumnopitys taxifolia</italic> into the dryland zone is particularly clear and thus palynological investigations have focused much more on this zone than have ecological ones.</p>
<fig id="F10" position="float">
<label>Figure 10</label>
<caption><p>Dryland zone. Modified from Walker et al. (<xref ref-type="bibr" rid="B141">2009</xref>). Baseline data held by Landcare Research.</p></caption>
<graphic xlink:href="feart-05-00094-g0010.tif"/>
</fig>
<fig id="F11" position="float">
<label>Figure 11</label>
<caption><p>Pollen (orange) and basal area biplots (gray) for conifers and Nothofagaceae. Pollen percentages (orange) based on terrestrial sum excluding ferns and lycopods. Basal areas for trees (blue) from the LUCAS programme national Natural Forest plot (20 &#x000D7; 20 m) data. Data on individual panels scaled relative to largest value.</p></caption>
<graphic xlink:href="feart-05-00094-g0011.tif"/>
</fig>
<p>Conifer forests were more widespread during the early deglacial and <italic>Prumnopitys taxifolia</italic> and <italic>Podocarpus</italic> spp. dominated the transition from shrubland-grassland to closed forests (Mcglone and Bathgate, <xref ref-type="bibr" rid="B74">1983</xref>; Mcglone and Topping, <xref ref-type="bibr" rid="B79">1983</xref>; Newnham et al., <xref ref-type="bibr" rid="B103">1989</xref>; Vandergoes et al., <xref ref-type="bibr" rid="B138">1997</xref>; Sandiford et al., <xref ref-type="bibr" rid="B131">2003</xref>; Augustinus et al., <xref ref-type="bibr" rid="B2">2012</xref>; Jara et al., <xref ref-type="bibr" rid="B47">2015</xref>). These early <italic>Prumnopitys</italic> and <italic>Podocarpus</italic> forests were not accompanied by an abundance of tree ferns, nor significant amounts of tall angiosperm trees, as the later <italic>Dacrydium</italic> dominated forests were and still are, and thus it seems that the early deglacial was drier than now. Dryland pollen sequences show that the forests existing just before deforestation strongly resembled the first forests to establish after the early deglacial <italic>Myrsine</italic>-<italic>Muehlenbeckia</italic> shrubland/grasslands, and then changed little during the Holocene (McGlone et al., <xref ref-type="bibr" rid="B88">2003</xref>). In the driest areas of the southeastern South Island, conifer-broadleaved forest co-existed with patches of grassland and shrubland (McGlone, <xref ref-type="bibr" rid="B70">2001b</xref>; Walker et al., <xref ref-type="bibr" rid="B142">2004a</xref>; Rogers et al., <xref ref-type="bibr" rid="B128">2005</xref>). It was only on the wet, western flanks of the Southern Alps (where <italic>Dacrydium cupressinum</italic> was abundant; Newnham et al., <xref ref-type="bibr" rid="B105">2007</xref>) and Northland (where <italic>Fuscospora</italic> was abundant) that this classic tall dryland conifer forest failed to establish.</p>
<p>A generalized dryland pattern that prevailed just before the Polynesian deforestation can be reconstructed from macrofossil and pollen data (Molloy, <xref ref-type="bibr" rid="B96">1968</xref>; McGlone et al., <xref ref-type="bibr" rid="B88">2003</xref>). The pre-deforestation pollen rain of the drylands was largely dominated by conifers (Figure <xref ref-type="fig" rid="F11">11</xref>), and the drylands may have supported denser conifer stands than elsewhere (Hall and McGlone, <xref ref-type="bibr" rid="B40">2006</xref>). Tall <italic>Prumnopitys taxifolia</italic>- and <italic>Podocarpus totara</italic>-dominated associations on the lowland, deeper, more fertile soils extended up into inland valleys in higher rainfall areas, with <italic>Dacrycarpus dacrydioides</italic> prominent on swamp or lagoon soils. Stonier, shallower soils throughout were dominated by <italic>Podocarpus laetus</italic>, especially on the midslopes of the inland valleys. Areas with cold winters and dry, droughty summers would have favored <italic>Phyllocladus alpinus</italic> dominance, with the most leached or acid soils carrying a cover of <italic>Halocarpus bidwillii</italic> shrubland. <italic>Prumnopitys taxifolia</italic> dominated the dryland pollen rain in most places, but there are only a few macrofossil or charcoal remains to corroborate this dominance. <italic>Podocarpus laetus</italic> (like the other <italic>Podocarpus</italic> species) is not well represented in the pollen rain, but occurs as a continuous component alongside <italic>Prumnopitys taxifolia</italic>. Preserved wood of <italic>Podocarpus laetus</italic> is widespread on tussock-clad hill slopes throughout eastern districts and is often accompanied by <italic>Phyllocladus alpinus</italic> charcoal (Molloy et al., <xref ref-type="bibr" rid="B97">1963</xref>; Ogden et al., <xref ref-type="bibr" rid="B110">1998</xref>; Wardle, <xref ref-type="bibr" rid="B149">2001b</xref>). Pollen and charcoal show that the driest regions of the central southeastern South Island, and intermontane valley bottoms of the eastern central Southern Alps had <italic>Phyllocladus alpinus</italic> and <italic>Halocarpus bidwillii</italic> low forest to scrub cover.</p>
<p>A wide range of angiosperm shrubs and trees co-existed with the dryland conifers but only a handful of these were tall or capable of dominating forest tracts. The few remaining fragments of dryland forest suggest that they would have been heavily stocked with conifers over a low and subordinate canopy of small angiosperm trees, such as <italic>Melicytus ramiflorus, Griselinia littoralis, Elaeocarpus hookerianus</italic>, and <italic>Hoheria angustifolia</italic>. Most of these species are in the 10&#x02013;15 m height range, with only <italic>Sophora microphylla, Kunzea</italic> spp., and <italic>Plagianthus regius</italic> taller (15&#x02013;20 m), but even they rarely match the 20&#x02013;50 m heights of the podocarps. The <italic>Kunzea</italic> species complex of Myrtaceaeous small leaved (leptophyll), wind-dispersed shrubs to tall trees formed extensive forest tracts: the taller <italic>Kunzea</italic> (<italic>K. serotina, K. robusta</italic>, and <italic>K. ericoides</italic>) range throughout the mainland islands and occupied the very driest sites but generally they do not form an integral part of mature conifer forest; rather they occur as ecotonal or early successional dominants (de Lange, <xref ref-type="bibr" rid="B30">2014</xref>). Interestingly, their small, linear needle-like leaves, erect multi-branched form, ectomycorrhizal status, ability to occupy bare ground, relatively fast growth and resistance to stresses, and rapid recovery after disturbance, including fire, is strongly reminiscent of Northern Hemisphere <italic>Pinus</italic>. It is unlikely that the dryland conifers were as dependent for regeneration on large-scale disturbance as they are in denser, moist forests, as these dryland forests lacked a dense understory, ferns being particularly sparse.</p>
</sec>
<sec>
<title>Conifers and the nothofagaceae</title>
<p>A striking feature of many pollen profiles from the New Zealand mainland south of the Northland Peninsula, and in particular along the axial ranges, is the rise to dominance over the postglacial period of the Nothofagaceae (Figures <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="fig" rid="F5">5</xref>&#x02013;<xref ref-type="fig" rid="F9">9</xref>). On the basis of their Southland pollen diagrams, Cranwell and von Post (<xref ref-type="bibr" rid="B26">1936</xref>) divided the New Zealand postglacial into three periods: (I) Grassland; (II) Podocarp forest; (III) Nothofagaceae forest and grassland mosaic period. Period I was regarded as the final stages of the glaciation, with cool, severe climates with little regional differentiation; Period II, wet with probably maximum warmth; and Period III, climatic deterioration (Cranwell, <xref ref-type="bibr" rid="B25">1938</xref>). That cooling climates had driven the spread of Nothofagaceae was readily accepted at first because <italic>Fuscospora cliffortioides</italic> and <italic>Lophozonia menziesii</italic> favor cooler regions and climatic explanations for anomalous Nothofagaceae distributions became popular for a time (Holloway, <xref ref-type="bibr" rid="B44">1954</xref>; Nicholls, <xref ref-type="bibr" rid="B107">1956</xref>). However, it had also been long known that the Nothofagaceae have a number of broad gaps in their distribution (the Taranaki volcanoes, the central and highest section of the Southern Alps, central Southland and Stewart Island; Cockayne, <xref ref-type="bibr" rid="B21">1928</xref>). Willett (<xref ref-type="bibr" rid="B153">1950</xref>) suggested that the forest cover is in a state of disequilibrium because of the lasting effects of exclusion of Nothofagaceae trees at the height of the LGM by ice or severe climates and thus attributed the long-term forest dynamics of glacial affected areas to the slow, but inexorable encroachment of Nothofagaceae trees into conifer-broadleaf dominated associations. The Nothofagaceae have winged, but poorly dispersed seeds and a requirement for ectomycorrhizal infection (Wardle, <xref ref-type="bibr" rid="B144">1984</xref>) and thus dispersal limitation became the favored explanation for Nothofagaceae gaps at all scales (Molloy et al., <xref ref-type="bibr" rid="B97">1963</xref>; Burrows, <xref ref-type="bibr" rid="B11">1965</xref>; Moar, <xref ref-type="bibr" rid="B94">1971</xref>). Palynological evidence suggests that neither of these explanations&#x02014;glacial exclusion or deteriorating climates&#x02014;is sufficient alone. To see why, we have to look at how the environmental niche of Nothofagaceae and conifers differ.</p>
<p>New Zealand Nothofagaceae, in general, occupy sites with cooler mean annual temperatures than the tall tree conifers (Leathwick, <xref ref-type="bibr" rid="B52">1995</xref>) and dominate most current tree lines (Case and Duncan, <xref ref-type="bibr" rid="B17">2014</xref>). While overlapping to a large extent with conifers in their environmental tolerances (Figure <xref ref-type="fig" rid="F11">11</xref>), and thus co-existing over wide areas, Nothofagaceae are mostly absent from the warmest locations&#x02014;mainly the north of the North Island and southern North Island lowlands. Like conifers, they are vulnerable to having their regeneration supressed by fast-growing broadleaves under warm, moist climates but lack the slow-growing emergent strategy that permits conifers to persist in dense broadleaved forests (Lusk et al., <xref ref-type="bibr" rid="B64">2013</xref>). They are also largely absent from the drier, more drought-prone, frostier regions where several tall conifer trees (most notably <italic>Podocarpus laetus</italic> and <italic>Prumnopitys taxifolia</italic>) are abundant. However, ecosystem models predict that Nothofagaceae should dominate over most of its range gaps (Hall and McGlone, <xref ref-type="bibr" rid="B39">2001</xref>, <xref ref-type="bibr" rid="B40">2006</xref>; Leathwick, <xref ref-type="bibr" rid="B53">2001</xref>).</p>
<p>The absence of Nothofagaceae from the seasonally dry and frosty areas, such as the south-eastern South Island, even though model results project its presence, seems unproblematic once the limitations of the regeneration niche (which is not explicitly included in the models) is understood. The models project Nothofagaceae dominance because it is quite frost resistant but also fast-growing, and excellent at colonizing slips and clearings (Wardle, <xref ref-type="bibr" rid="B144">1984</xref>; Richardson et al., <xref ref-type="bibr" rid="B122">2011</xref>). However, they are poor at regenerating in grassland&#x02014;where their sensitivity to late season dryness appears to be a factor&#x02014;and are subject to local dispersal and mycorrhizal limitations. As Wardle (<xref ref-type="bibr" rid="B144">1984</xref>, pp. 381&#x02013;382) comments, &#x0201C;Beech seedlings are poor competitors and have difficulty in establishing where the forest understory is dense, especially where turf or fern covers the ground. Young seedlings are prone to unseasonal frosts and both winter and summer desiccation. Even saplings over 2 m high can be killed by winter desiccation. Establishment success is therefore usually poor in the open, particularly where the climate tends to be cold and dry.&#x0201D;</p>
<p>If difficulties with establishment are overcome, Nothofagaceae have on average more rapid height growth and biomass accumulation than do competing conifers (Wardle, <xref ref-type="bibr" rid="B147">1991</xref>). This advantage is particularly marked at tree line in relation to the competing conifers <italic>Podocarpus laetus, Phyllocladus alpinus</italic>, and <italic>Halocarpus biformis</italic>. In upland Nothofagaceae forest, <italic>Phyllocladus alpinus</italic> and <italic>Halocarpus</italic> spp. are often confined to the more stressed sites, such as frost-prone terraces and valley heads (Wardle, <xref ref-type="bibr" rid="B150">1985</xref>) or on poorly drained soils. In broad terms, the Nothofagaceae have higher photosynthetic rates and therefore are well equipped to take advantage of high insolation days and short summers (Richardson et al., <xref ref-type="bibr" rid="B121">2005a</xref>; Whitehead et al., <xref ref-type="bibr" rid="B152">2011</xref>). The Nothofagaceae are also ectomycorrhizal and this brings with it the ability to directly use nutrients locked into organic complexes and also to lower the nutrient content of organic soils to such an extent that they are largely unsuitable for trees with arbuscular mycorrhizal infection (Dickie et al., <xref ref-type="bibr" rid="B32">2014</xref>). However, these advantages over conifers are lessened under cloudy, low insolation summers (growth rate premium reduced) and long, mild winters (breakdown of soil organic matter and release of nutrients enhanced). When this is the climatic regime, other angiosperm broadleaved species prevail, dense fern groundcover forms restricting regeneration of the Nothofagaceae seedlings. We thus have the early Holocene conifer-dominant treeline associations of <italic>Phyllocladus alpinus, Halocarpus bidwillii</italic> and <italic>H. biformis, Podocarpus laetus</italic> and <italic>P. nivalis</italic>, and <italic>Libocedrus bidwilli</italic> (McGlone et al., <xref ref-type="bibr" rid="B82">2011</xref>; McGlone and Basher, <xref ref-type="bibr" rid="B73">2012</xref>) remnants of which persist throughout the axial ranges but most commonly in the central Southern Alps. There is a strong association of these conifer-dominant treelines with low insolation situations, such as in the southern Ruahine and northern Tararua Ranges (Rogers and McGlone, <xref ref-type="bibr" rid="B127">1994</xref>), but limited Nothofagaceae spread across alpine-montane valley systems most likely contributed to this pattern (Wardle and Lee, <xref ref-type="bibr" rid="B151">1990</xref>; McGlone et al., <xref ref-type="bibr" rid="B84">1996</xref>; Hall and McGlone, <xref ref-type="bibr" rid="B40">2006</xref>).</p>
<p>Mixed Nothofagaceae-conifer tall lowland forest is common in some regions, but most prevalent in the north-western South Island. Trade-offs in growth-rate and regeneration strategy can facilitate their long-term co-occurrence (Lusk and Smith, <xref ref-type="bibr" rid="B61">1998</xref>). However, the propensity of Nothofagaceae to form monospecific stands means they are either segregated by site from conifers&#x02014;with Nothofagaceae along river courses or ridges&#x02014;or the tall conifers (mainly <italic>Dacrydium cupressinum, Prumnopitys ferruginea, P. taxifolia</italic>, and <italic>Podocarpus laetus</italic>) form a discontinuous, sparse overstratum (Wardle, <xref ref-type="bibr" rid="B144">1984</xref>, <xref ref-type="bibr" rid="B147">1991</xref>). Only rarely are isolated Nothofagaceae trees scattered in conifer-broadleaved forest (Wardle, <xref ref-type="bibr" rid="B144">1984</xref>). Holocene pollen sequences from the wide Nothofagaceae gap in central western South Island show that these boundaries have been largely static over the mid to late Holocene both at the <italic>Fuscospora</italic> dominated northern edge (Pocknall, <xref ref-type="bibr" rid="B118">1980</xref>) and in the <italic>Lophozonia menziesii</italic> dominated southern margin of the gap (Li et al., <xref ref-type="bibr" rid="B57">2008</xref>). Ecosystem models also predict mixed conifer-Nothofagaceae associations in both regions (Hall and McGlone, <xref ref-type="bibr" rid="B40">2006</xref>).</p>
</sec>
</sec>
<sec id="s4">
<title>New Zealand conifers from a global biogeographic perspective</title>
<sec>
<title>New Zealand conifers: relictual?</title>
<p>Extant New Zealand conifers are clearly not relic. They are ubiquitous within the New Zealand mainland, and their close relatives thrive in similar oceanic forest environments elsewhere (McGlone et al., <xref ref-type="bibr" rid="B81">2016</xref>). Their ecological success should not be measured by their species richness, but by their dominance of the forest biomass (Bond, <xref ref-type="bibr" rid="B6">1989</xref>) and on this measure they are the most successful plant group in New Zealand. The lineages from which they come mostly evolved during the Palaeogene-early Neogene (Pittermann et al., <xref ref-type="bibr" rid="B117">2012</xref>; Yang et al., <xref ref-type="bibr" rid="B159">2012</xref>; Lu et al., <xref ref-type="bibr" rid="B59">2014</xref>). Some are quite recent: the alpine-upper montane shrub and small tree group of <italic>P. lawrencei</italic> (SE Australia), <italic>P. gnidioides</italic> (New Caledonia) and <italic>P. nivalis</italic> (New Zealand) is indicated by molecular clock methods to have originated &#x0003C;5 ma ago (Condamine et al., <xref ref-type="bibr" rid="B22">2017</xref>) and this is consistent with the timing of the uplift of the Southern Alps of New Zealand (Heenan and McGlone, <xref ref-type="bibr" rid="B43">2013</xref>). <italic>Prumnopitys taxifolia</italic> (New Zealand) and <italic>P. andina</italic> (southern South America) are a closely related two-species clade, and may have diverged only 10 ma ago. The New Zealand conifers are therefore not holdovers from pre-angiosperm or even pre Gondwana-separation times but represent continuing adaptation to changing environments and competitors. However, that said, rainforest conifers have had to compensate for the structural and physiological limitations imposed by their hydraulics based on narrow tracheids, narrow, simple veined leaves, sluggish stomatal responses and, overall, low photosynthetic and growth rates (Brodribb et al., <xref ref-type="bibr" rid="B9">2012</xref>). They do this by leveraging the inbuilt stress tolerance these attributes bring with them, and the longevity that accompanies their slow growth rate [hence Bond&#x00027;s (<xref ref-type="bibr" rid="B6">1989</xref>) &#x0201C;tortoise&#x0201D; analogy].</p>
<p>Given conifer dominance in many different New Zealand forest types we suggest that, rather than having severe disadvantages, they have been extraordinarily successful in a range of niches characteristic of an oceanic temperate environment. The biology and biogeographic history of the New Zealand conifers therefore can only be understood against the constraints and opportunities presented by the uncommon climate and unusual geographic position of the New Zealand archipelago.</p>
</sec>
<sec>
<title>Adaptation and historical contingency</title>
<p>Despite sharing its highly oceanic, moist climate regime with restricted temperate coastal regions elsewhere on the margins of the major continents New Zealand is, from a biogeographical viewpoint, unique. The archipelago has the only large temperate islands that are remote from a continental mainland and therefore never connected during the course of a glacial-interglacial cycle. Small, oceanic landmasses experience muted climatic extremes&#x02014;both seasonally and at glacial-interglacial scales. However, during the extreme cold and dry of a glacial maximum, the archipelago has to fall back on its own floristic resources as it has no access to permanent cold boreal, arctic or dry steppe zones. Even New Zealand treelines cannot fill the gap, as they have exceptionally mild climates (Cieraad et al., <xref ref-type="bibr" rid="B20">2012</xref>; Cieraad and McGlone, <xref ref-type="bibr" rid="B18">2014</xref>). The trees of New Zealand, therefore, are evolutionarily adjusted to a limited climatic range. The brief intervals of a few thousand years during which the southern third of the archipelago experiences glacial cold, dry climates merely punctuate an otherwise highly oceanic environment.</p>
<p>Given the double filter of oceanicity and isolation, do New Zealand conifers represent unique adaptations to the oceanic climate regime? And has historical contingency played a role in that some niches have not been filled? Globally, oceanic temperate forests are extraordinarily diverse in terms of their structural and taxonomic makeup (DellaSala, <xref ref-type="bibr" rid="B31">2011</xref>). They include single canopy deciduous angiosperm forests of the western fringe of Europe, dense, conifer-dominant forests of north-western North America, tall evergreen <italic>Eucalyptus</italic> forests of eastern Australia, but also structurally and taxonomically similar southern conifer-evergreen angiosperm forest of the southern Atlantic coast of Brazil, southern Chile and the highlands of New Guinea. Near-identical oceanic climate regimes have therefore generated very different structural and plant functional trait solutions. We argue that the southern conifers have, by virtue of their continuous presence in oceanic environments, arrived at an evolutionary solution that takes advantage of their stress resistant physiology and morphology and minimizes the consequences of the accompanying slow growth. In an oceanic temperate, evergreen forest, supra-canopy space is potentially available, but only to trees with foliage that can endure winter conditions and survive episodic drying, wind, and high insolation in summer. The hydraulic physiology and leaf morphology of the conifers is clearly superior in this zone to that of all but a few angiosperms. The trade-off is the sacrifice of fast-seedling and sapling growth, which they partially offset with specialized juvenile growth forms. Once established, their longevity is the key to their long-term success as they can wait for the rare occasions which favor large-scale regeneration. Disturbance of a size that permits them to regenerate must be (at an evolutionary timescale) as certain as the alternation of seasons, and this is recognized in the conceptual models developed to explain their regeneration strategy (Ogden, <xref ref-type="bibr" rid="B108">1985</xref>; Ogden and Stewart, <xref ref-type="bibr" rid="B109">1995</xref>; Enright et al., <xref ref-type="bibr" rid="B37">1999</xref>).</p>
<p>It is only under certain climatic conditions that the conifers fail to persist. The first is under hyperoceanic situations&#x02014;such as that of Stewart Island during the early Holocene. Here, we suggest, a fern-rich ground layer, dense broadleaf shrub and canopy with abundant tree ferns can successfully resist conifer invasion. At a small scale, these conditions also prevail in shady gullies on rich soils where only sporadic conifer regeneration is possible (Coomes et al., <xref ref-type="bibr" rid="B23">2005</xref>). The second situation in which the New Zealand conifers are at a disadvantage is in the presence of Nothofagaceae. <italic>Libocedrus bidwillii, Phyllocladus alpinus</italic> and <italic>Halocarpus</italic> dominated the subalpine and upper montane zone in the earlier part of the postglacial, but in nearly all locations have since lost this dominance during the Holocene. While the relatively slow spread rates of Nothofagaceae account for some of the early prevalence of conifer-dominated associations in alpine/montane environments, the underlying driver is almost certainly a climatic switch beginning around 9,000 years ago, from long, low insolation summers and mild winters&#x02014;which favored slow-growing conifers&#x02014;to short, high insolation summer and colder, longer winters&#x02014;which favored the fast-growing mycorrhizal Nothofagaceae (Wilmshurst et al., <xref ref-type="bibr" rid="B155">2002</xref>).</p>
</sec>
<sec>
<title>Vacant tree niches?</title>
<p>It is possible that there is a vacant tree niche in New Zealand currently represented by the winter cold dryland environments of the rain-shadow of the Southern Alps and a vacant conifer niche at tree line. During the full glacial, a very large area of New Zealand had only sparse, scattered forest, and the open, dry eastern lowlands something approaching open herb field with prostrate shrubs. In Northern Hemisphere temperate regions the LGM was characterized by open conifer dominated parklands unless the desert-steppe climates prevailed (McGlone et al., <xref ref-type="bibr" rid="B89">2012</xref>). The current rapid spread of exotic fast-growing mycorrhizal wilding pines (in particular <italic>Pinus contorta</italic> and <italic>P. nigra</italic>) into lowland to montane fire-induced grassland/shrublands (Ledgard, <xref ref-type="bibr" rid="B56">2001</xref>) indicates a vacant &#x0201C;conifer&#x0201D; niche in the drylands that is only partly filled by the Myrtaceous <italic>Kunzea</italic>. Evolution of such a tree type presumably requires a permanent, highly seasonal, winter-cold environment that is absent in the Southern Hemisphere from all but Antarctica. At some tree lines in the drier eastern side of the axial mountain ranges, exotic pines are spreading above the Nothofagaceae tree line and this likewise suggests a tree line &#x0201C;pine/fir/spruce&#x0201D; niche remains unfilled for similar reasons (Cieraad et al., <xref ref-type="bibr" rid="B19">2014</xref>; Tomiolo et al., <xref ref-type="bibr" rid="B136">2016</xref>).</p>
</sec>
</sec>
<sec id="s5">
<title>Are palynology and ecology mutually supportive?</title>
<p>In New Zealand, history cannot be ignored. Besides the alternation of glacial-interglacial cycles, frequent, massive disruption caused by earthquakes, volcanic eruptions, cyclonic storms and the recent imposition of historically unprecedented human-lit fires have left major historical legacies. Therefore, in New Zealand, palaeoecological and neoecological researchers frequently collaborate as our exploration of conifer history shows. Not only that, neoecologists have often taken the lead in study of the past, as exemplified by Peter Wardle with his Quaternary investigations of soil charcoal (Wardle, <xref ref-type="bibr" rid="B148">2001a</xref>), Colin Burrows and the palaeoecology of the South Island mountains (Burrows et al., <xref ref-type="bibr" rid="B13">1993</xref>), Susan Walker, Bill Lee and Geoff Rogers on the history of the drylands of the southern South Island (Walker et al., <xref ref-type="bibr" rid="B143">2004b</xref>), and the ground-breaking neo-palaeoresearch by ecologist John Ogden and colleagues on many aspects of northern plant successions and Quaternary history (for example: Ogden et al., <xref ref-type="bibr" rid="B112">1992</xref>, <xref ref-type="bibr" rid="B111">1997</xref>).</p>
<p>The answer then to the question posed by Bill Harris many years ago is that the unbroken legacy of Lennart von Post and Lucy Cranwell continues in New Zealand, palaeoecology and ecology combining in a productive relationship to document the past, understand the present, and anticipate the future.</p>
</sec>
<sec id="s6">
<title>Author contributions</title>
<p>MM co-led the paleoecological section of the review and wrote the first draft; SR and OB undertook analyses of pollen and ecological data, and prepared the figures; SR and GP led the neoecological component of the review; JW organized underpinning pollen databases and co-led the paleoecological component. All authors contributed to draft revisions of the ms.</p>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p></sec>
</sec>
</body>
<back>
<ack><p>This research was supported by SSIF funding for Crown Research Institutes from the New Zealand Ministry of Business, Innovation and Employment&#x00027;s Science and Innovation Group. We thank Rewi Newnham and Marcus Vandergoes for permission to republish their Okarito pollen data and Susan Walker for access to the data Figure <xref ref-type="fig" rid="F10">10</xref> and Jamie Wood for drafting Figure <xref ref-type="fig" rid="F2">2</xref>. We acknowledge the use of data drawn from the Natural Forest plot data collected between January 2002 and March 2007 by the LUCAS programme for the Ministry for the Environment.</p>
</ack>
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