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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Dent. Med.</journal-id>
<journal-title>Frontiers in Dental Medicine</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Dent. Med.</abbrev-journal-title>
<issn pub-type="epub">2673-4915</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fdmed.2022.883336</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Dental Medicine</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Insights Into Pulp Biomineralization in Human Teeth</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>He</surname> <given-names>Rui</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1696035/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Chou</surname> <given-names>Conrad</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1728701/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Chen</surname> <given-names>Ling</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Stoller</surname> <given-names>Marshall</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Kang</surname> <given-names>Misun</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1534799/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Ho</surname> <given-names>Sunita P.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/160365/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Division of Preclinical Education, Biomaterials and Engineering, Department of Preventive and Restorative Dental Sciences, School of Dentistry, University of California, San Francisco</institution>, <addr-line>San Francisco, CA</addr-line>, <country>United States</country></aff>
<aff id="aff2"><sup>2</sup><institution>Hangzhou Normal University</institution>, <addr-line>Hangzhou</addr-line>, <country>China</country></aff>
<aff id="aff3"><sup>3</sup><institution>Division of Pediatric Dentistry, Department of Oral and Craniofacial Sciences, School of Dentistry, University of California, San Francisco</institution>, <addr-line>San Francisco, CA</addr-line>, <country>United States</country></aff>
<aff id="aff4"><sup>4</sup><institution>Department of Urology, School of Medicine, University of California, San Francisco</institution>, <addr-line>San Francisco, CA</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Brian L. Foster, The Ohio State University, United States</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Sarah Peters, The Ohio State University, United States; Monica Prasad Gibson, University of Alberta, Canada</p></fn>
<corresp id="c001">&#x0002A;Correspondence: Sunita P. Ho <email>sunita.ho&#x00040;ucsf.edu</email></corresp>
<fn fn-type="other" id="fn001"><p>This article was submitted to Systems Integration, a section of the journal Frontiers in Dental Medicine</p></fn></author-notes>
<pub-date pub-type="epub">
<day>03</day>
<month>05</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>3</volume>
<elocation-id>883336</elocation-id>
<history>
<date date-type="received">
<day>24</day>
<month>02</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>09</day>
<month>03</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2022 He, Chou, Chen, Stoller, Kang and Ho.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>He, Chou, Chen, Stoller, Kang and Ho</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license></permissions>
<abstract>
<sec>
<title>Introduction</title>
<p>Mineralized pulp (MP) compromises tooth function and its causation is unknown. The hypothesis of this study is that pulp mineralization is associated with pulpal tissue adaptation, increased mineral densities, and decreased permeabilities of tubular dentin and cementum. Methods will include correlative spatial mapping of physicochemical and biochemical characteristics of pulp, and contextualize these properties within the dentin-pulp complex (DPC) to reveal the inherent vunerabilities of pulp.</p></sec>
<sec>
<title>Methods</title>
<p>Specimens (<italic>N</italic> = 25) were scanned using micro X-ray computed tomography (micro-XCT) to visualize MP and measure mineral density (MD). Elemental spatial maps of MP were acquired using synchrotron X-ray fluorescence microprobe (&#x003BC;XRF) and energy dispersive X-ray spectroscopy (EDX). Extracted pulp tissues were sectioned for immunolabelling and the sections were imaged using a light microscope. Microscale morphologies and nanoscale ultrastructures of MP were imaged using scanning electron (SEM) and scanning transmission electron microscopy (STEM) techniques.</p></sec>
<sec>
<title>Results</title>
<p>Heterogeneous distribution of MD from 200 to 2,200 mg/cc, and an average MD of 892 (&#x000B1;407) mg/cc were observed. Highly mineralized pulp with increased number of occluded tubules, reduced pore diameter in cementum, and decreased connectivity in lateral channels were observed. H&#x00026;E, trichrome, and von Kossa staining showed lower cell and collagen densities, and mineralized regions in pulp. The biomolecules osteopontin (OPN), osteocalcin (OCN), osterix (OSX), and bone sialoprotein (BSP) were immunolocalized around PGP 9.5 positive neurovascular bundles in MP. SEM and STEM revealed a wide range of nano/micro particulates in dentin tubules and spherulitic mineral aggregates in the collagen with intrafibrillar mineral surrounding neurovascular bundles. EDX and &#x003BC;XRF showed elevated counts of Ca, P, Mg, and Zn inside pulp and at the dentin-pulp interface (DPI) in the DPC.</p></sec>
<sec>
<title>Conclusion</title>
<p>Colocalization of physical and chemical, and biomolecular compositions in MP suggest primary and secondary biomineralization pathways in pulp and dentin at a tissue level, and altered fluid dynamics at an organ level. Elevated counts of Zn at the mineralizing front in MP indicated its role in pulp biomineralization. These observations underpin the inherent mechano- and chemo-responsiveness of the neurovascular DPC and help elucidate the clinical subtleties related to pulpitis, dentin-bridge, and pulp stone formation.</p></sec></abstract>
<kwd-group>
<kwd>pulp biomineralization</kwd>
<kwd>pulp</kwd>
<kwd>interstitial fluid pressure</kwd>
<kwd>dentin-pulp complex</kwd>
<kwd>permeability</kwd>
</kwd-group>
<counts>
<fig-count count="6"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="79"/>
<page-count count="16"/>
<word-count count="8726"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>Dental pulp is a cellular organic network of blood and lymphatic vessels interspersed with nerves. This neurovascular organic network is housed in a spacious tooth-chamber and the relatively narrowed root-canal spaces of a tooth. The vascularized and innervated pulp provides nutrients to cells within tissues of teeth. The pulp is compartmentalized into several zones with varying densities of cells, blood vessels, and nerves (<xref ref-type="bibr" rid="B1">1</xref>). This multi-zonal organ from a bioengineering perspective exhibits a relatively higher hydrostatic pressure compared to other organs, contains regenerative cells, and is encapsulated within the harder yet permeable walls of the predominantly inorganic dentin. The natural &#x0201C;control systems&#x0201D; that maintain the interstitial fluid pressure (IFP) of the pulp include lymphatic vessels and capillaries (<xref ref-type="bibr" rid="B2">2</xref>&#x02013;<xref ref-type="bibr" rid="B4">4</xref>). These control systems regulate interstitial fluid flow from the pulp through the dentin tubules to the enamel coronally, and to cementum apically (<xref ref-type="bibr" rid="B1">1</xref>). They maintain local concentrations of plasma proteins within the zones, and the overall osmotic pressure within pulp. The higher IFP prevents bacterial invasion and maintains overall functional homeostasis not limited to pulp, but also the dentin-pulp complex (DPC) (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B5">5</xref>&#x02013;<xref ref-type="bibr" rid="B7">7</xref>). Mineralization of this functionally influential pulpal organ has been phrased as pulp mineralization (<xref ref-type="bibr" rid="B1">1</xref>) with minimal to no information on its causation. Clinically, it commonly manifests as pulp stone, and dentin-bridge formation (<xref ref-type="bibr" rid="B8">8</xref>&#x02013;<xref ref-type="bibr" rid="B10">10</xref>).</p>
<p>Biominerals within pulp to date have undergone rudimentary investigations, despite being identified and categorized as free or embedded in pulp, and/or attached to dentin (<xref ref-type="bibr" rid="B11">11</xref>). Mineralization of the innervated and vascularized pulp can result from sterile or non-sterile inflammation (<xref ref-type="bibr" rid="B12">12</xref>), and from pathways similar to those reported in neurovascular skeletal and smooth muscles (<xref ref-type="bibr" rid="B13">13</xref>). The primary effectors that inextricably shift the IFP of the vascularized and innervated pressurized pulp include molecular- and tissue-level factors that occur locally at site-specific anatomical locations. These factors include: (1) changes in permeabilities and mineral densities of dentin and cementum that affect fluid transport between pulp and the periodontal complex (<xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B14">14</xref>, <xref ref-type="bibr" rid="B15">15</xref>), and (2) inflammation-induced vasodilation and swelling (<xref ref-type="bibr" rid="B2">2</xref>). Secondary effectors that can potentiate the aforementioned primary effectors at the level of a DPC include: (3) anatomy-specific tooth architecture, in particular, the apical orifice &#x0201C;strangulation&#x0201D; of an already inflamed pulp (<xref ref-type="bibr" rid="B4">4</xref>); and consequently (4) ischemia related altered oxygen supply to the local regions of the pulp (<xref ref-type="bibr" rid="B4">4</xref>).</p>
<p>The physiologically beneficial characteristic of higher IFP, ironically can increase beyond normal limit when the tooth is insulted (orthodontic forces, pulpitis, trauma, auto-transplantation) (<xref ref-type="bibr" rid="B16">16</xref>). This net increase in IFP invariably &#x0201C;tips&#x0201D; the homeostatic balance and triggers acute or chronic inflammatory pathway(s). The impact of the inflammatory pathways on the pulp also depends on the magnitude, frequency and duration of the insult, and masticatory function (<xref ref-type="bibr" rid="B1">1</xref>, <xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B12">12</xref>, <xref ref-type="bibr" rid="B14">14</xref>). Conceivably, this naturally engineered pressure chamber is mechanically stressed and strained, and contains pressure and chemical graidents. These gradients are encouraged by balanced concentrations of biomolecules and ions across the many zones and tissue interfaces including the dentin-pulp and -cementum interfaces.</p>
<p>Interfaces across the many disparate tissues of a tooth are a part and parcel of the intricate interconnected network that can affect fluid flow between pulp and the periodontal complex. The impaired cementum, dentin or pulp, as such, can alter the homeostasis of pulp at multiple length scales, which will be the topic of discussion, but within the framework of pulp biomineralization. The hypothesis of this study is that pulp mineralization is associated with pulpal tissue adaptation, and increased mineral densities and decreased permeabilities of tubular dentin and cementum. Study outcomes will confirm that the mineralized pulp in non-carious human permanent teeth is associated with altered constituents of the pulp, and compromised physicochemical characteristics of tubular dentin and cementum. Methods will include correlative spatial mapping of physicochemical and biochemical characteristics of pulp, and contextualize these properties within the DPC to reveal the inherent vunerabilities of pulp. This multiscale correlative approach will provide insights into the plausible predisposed nature of tissues (<xref ref-type="bibr" rid="B17">17</xref>&#x02013;<xref ref-type="bibr" rid="B21">21</xref>), and in this case pulp, that can form biominerals as a response to significant shifts in the IFP. From a practical standpoint, it will reveal the need to question the effect of clinical interventions such as local anesthesia (<xref ref-type="bibr" rid="B22">22</xref>), dental restorations (<xref ref-type="bibr" rid="B23">23</xref>), periodontal treatment (<xref ref-type="bibr" rid="B24">24</xref>), and orthodontics (<xref ref-type="bibr" rid="B16">16</xref>), all of which can significantly affect functional homeostasis of the pulp.</p></sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and Methods</title>
<p>As mentioned, a multiscale correlative microspectroscopic approach (<xref ref-type="bibr" rid="B17">17</xref>&#x02013;<xref ref-type="bibr" rid="B21">21</xref>) was taken to gather insights into pulp biomineralization. Methods include a length-scale mapping of physical, chemical, and biochemical characteristics of pulp, dentin, and cementum. Post analyses of the acquired data within the context of the DPC will reveal insights into plausible biomineralization pathways of pulp in non-carious human teeth.</p>
<sec>
<title>Specimen Preparation</title>
<p>Fresh human non-carious permanent teeth that were extracted (including both anterior and posterior) for orthodontic, periodontic, and prosthodontic reasons were used in this study. These undocumented (with no identifiers including age and gender of the patient) teeth were prepared within the guidelines of Human Research Protection Program Institutional Review Board of UCSF (Study Number: 16-19606). Teeth (<italic>N</italic> = 25) were fixed in 10% neutral buffered formalin (NBF, Richard-Allan Scientific, Kalamazoo, MI, USA) overnight at 4&#x000B0;C, washed three times in 1x phosphate buffered saline (PBS), and were stored in 70% ethanol solution at 4&#x000B0;C.</p></sec>
<sec>
<title>Light Microscopy and Micro X-Ray Computed Tomography</title>
<sec>
<title>Image Acquisition</title>
<p>The root canals of the specimens were scanned in 70% ethanol using micro X-ray computed tomography (micro-XCT) system (MicroXCT-200, Carl Zeiss Microscopy, Pleasanton, CA) at 2X (9 &#x003BC;m/voxel) and 4X (5 &#x003BC;m/voxel) magnification with 80 kVp (2X) and 50 kVp (4X) of voltage and 8 W of power. X-ray tomograms (virtual slices) were reconstructed using XM Reconstructor following center offset and beam hardening corrections (<xref ref-type="bibr" rid="B25">25</xref>).</p>
<p>Specimens were sectioned into two halves along the longitudinal axis with a slow-speed diamond saw (Isomet, Buehler, Lake Bluff, IL) following X-ray scanning. Reflection and transmission optical images of the sectioned halves were acquired using a light microscope (LM) (SZ61, Olympus, Tokyo, Japan). The extracted pulp from each tooth was imaged using micro-XCT, and the specimens were further processed for immunohistochemistry and subsequently for correlative microspectroscopy. Pulp without detectable minerals by X-rays served as controls.</p></sec>
<sec>
<title>Image Analyses</title>
<p>The reconstructed images of the root canals with intact pulp, and pulp isolated from teeth were analyzed using AVIZO 2019.2 software (Fisher Scientific, Hillsboro, OR). X-ray intensity values were converted to mineral densities (MD, mg/cc) following a published calibration protocol (<xref ref-type="bibr" rid="B25">25</xref>). Mineralized regions were segmented, and histograms illustrating the frequency of MD occurrences were plotted. A Gaussian curve was fitted to the average MD histogram obtained from all scanned specimens using a curve fitting tool in MATLAB (<xref ref-type="bibr" rid="B19">19</xref>). The lateral channels and pores in cementum specific to the roots were segmented, and the pore diameter distribution within cementum volumes were obtained. Regions of interest from the root canal through dentin were selected, and MD profiles across the root (root diameter) were mapped using Fiji.</p></sec></sec>
<sec>
<title>Field Emission Scanning Electron Microscopy and Scanning Transmission Electron Microscopy</title>
<p>The sectioned specimens were dehydrated using ascending series of ethanol solutions (from 50 to 100%) for field emission scanning electron microscopy (SEM, SIGMA VP500, Carl Zeiss Microscopy, Pleasanton, CA). Surface morphologies of dentin and pulp were imaged at 1 keV. Specimens were infiltrated with LR-white resin (Electron Microscopy Sciences, Hatfield, PA) in a gelatin capsule and polymerized for 2 days at 60&#x000B0;C and cut into 90 nm thin ultrasections with an ultramicrotome (Reichert Ultracut E, Leica Microsystems, Inc., Buffalo Grove, IL). The ultrasections were collected on formvar/carbon-coated Ni grids (Electron Microscopy Sciences) and were imaged for ultrastructure using scanning transmission electron microscopy (STEM, SIGMA VP500, Carl Zeiss Microscopy, Pleasanton, CA) mode at 15 keV (<xref ref-type="bibr" rid="B17">17</xref>, <xref ref-type="bibr" rid="B18">18</xref>).</p></sec>
<sec>
<title>Histology, Immunohistochemistry, and Immunofluorescence</title>
<p>Extracted yet intact pulp (undemineralized) was processed using 15 and 30% sucrose solutions, embedded in optimal cutting temperature (OCT) medium, and cryosectioned to make 6&#x02013;7 &#x003BC;m thick transverse sections. Sections from all specimens were stained with hematoxylin and eosin (H&#x00026;E), Masson&#x00027;s trichrome (MT), and von Kossa to localize cell nuclei, collagen, and calcified regions (<xref ref-type="bibr" rid="B17">17</xref>), respectively.</p>
<p>For immunohistochemistry (IHC), epitope retrieval was achieved with 0.1 M sodium citrate buffer (pH = 6.0) for 30 min at 80&#x000B0;C for all sections. Sections were then blocked for endogenous peroxidases by immersion in 0.6% hydrogen peroxide in 80% methanol for 30 min at 25&#x000B0;C. Blocking of all sections was performed with the addition of 20% normal goat serum and 2.5% bovine serum albumin (Sigma-Aldrich) in PBS solution for 60 min at 25&#x000B0;C just prior to the addition of primary antibody. Sections were incubated overnight at 4&#x000B0;C with anti-PGP 9.5 (1:500 rabbit monoclonal antibody, AB108986; Abcam) for nerves (<xref ref-type="bibr" rid="B26">26</xref>), and for acidic molecule location anti-OPN (1:200 mouse monoclonal antibody, sc-73631, Santa Cruz Biotechnology Inc., Dallas, TX), anti-OCN (1:200 mouse monoclonal antibody, sc-73464, Santa Cruz Biotechnology Inc., Dallas, TX), and anti-BSP (1:200 mouse monoclonal antibody, sc-73630, Santa Cruz Biotechnology, Inc, Dallas, TX) were used. Anti-OSX (1:200 mouse monoclonal antibody, sc-393325; Santa Cruz Biotechnology, Inc, Dallas, TX), an osteogenic transcription factor was spatially localized using immunofluorescence microscopy. The staining reactions of secondary antibody DAB from Vector Lab (Burlingame, CA) and Alexa Fluor Donkey anti-rat IgG AF568 secondary antibody (AB175475; Abcam) at a 1:200 dilution were performed following the protocols provided in the kits. Hoechst 33342 solution (5 &#x003BC;g/ml) was utilized as counterstain for IF. After counterstaining, all sections were dehydrated and sealed using DPX mount (Sigma-Aldrich, St. Louis, MO). All experimental staining procedures were accompanied by control slides replacing primary antibody binding with blocking solution containing 5% normal goat serum and 2.5% BSA in PBS to assess the level of non-specific staining. Slides were examined at 40X (water objective) using a light microscope with various fluorescence filters (Zeiss Observer Z1, Axiocam 506) (<xref ref-type="bibr" rid="B26">26</xref>).</p></sec>
<sec>
<title>Correlative Light and Electron Microscopy of Histology Sections</title>
<p>The matrix structure was examined at a higher resolution and was correlated with histologic stains, and immunolocalized biomolecules. Following light microscopy of stained and immunolocalized tissues, sections were further examined at a higher resolution by collecting the field emission electrons using FESEM at a scanning electron voltage of 1keV (<xref ref-type="bibr" rid="B17">17</xref>, <xref ref-type="bibr" rid="B21">21</xref>).</p></sec>
<sec>
<title>Energy Dispersive X-Ray, and Microprobe X-Ray Fluorescence Spectroscopy</title>
<p>The chemical composition of intact pulp was acquired using an energy dispersive X-ray detector (EDX, Bruker AXS, Madison, WI) at 15 keV. Phase analysis was performed using cluster method in Esprit 2 software (Bruker Nano Inc., Madison, Wis., US). Elemental maps specific to zinc (Zn) and magnesium (Mg) in addition to commonly identified calcium (Ca) and phosphorus (P) of roots and pulp from teeth also were collected using the X-ray fluorescence microprobe (&#x003BC;-XRF) at beamline 10.3.2 of Advanced Light Source (ALS) at Lawrence Berkeley National Laboratory (LBNL). Spatial maps of elemental counts were generated using an incident energy beam of 10 keV and a spot size of &#x0007E;8 &#x000D7; 8 &#x003BC;m (<xref ref-type="bibr" rid="B17">17</xref>, <xref ref-type="bibr" rid="B19">19</xref>).</p></sec></sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<p>Results will illustrate that the structural and mineral density changes in tubular dentin and cementum within human molars are associated with mineralizing neurovascular organic network. At a microscale tissue-level, data will illustrate that the mineralizing pulp is contained within tubular dentin occluded with various Zn and Mg containing mineralized nanoparticles, and microscale aggregates of the same spread into larger volumes of the organic network. Furthermore, at a macroscale tooth-level, data will illustrate that pulp mineralization is associated with decreased cementum permeability and increased accessory (lateral) channel occlusion.</p>
<sec>
<title>Mineral Densities of Mineralized Pulp</title>
<p>Mineralized pulp and adapted dentin regardless of tooth type (anterior, premolar, and molar) were observed using reflection and transmission light microscopy (LM) (<xref ref-type="fig" rid="F1">Figure 1A</xref>) modes. Regions of adapted dentin were observed by capturing scattered and attenuated light (dashed outlined white and dark regions, <xref ref-type="fig" rid="F1">Figure 1A</xref>), respectively. Reconstructed digital volumes of pulp extracted from teeth using CT data illustrated a distribution of lower and higher mineralized regions (<xref ref-type="fig" rid="F1">Figure 1B</xref>) along the root. Lower and higher MDs also were observed in the transverse sections (asterisks <sup>&#x0002A;</sup>-<sup>&#x0002A;&#x0002A;&#x0002A;</sup>, <xref ref-type="fig" rid="F1">Figure 1B</xref>), and this pattern was consistent across all tooth types (<xref ref-type="fig" rid="F1">Figure 1C</xref>). The MD range of mineralized pulp was &#x0007E;200&#x02013;2,200 mg/cc (<xref ref-type="fig" rid="F1">Figure 1C</xref>) and on average was 892 &#x000B1; 407 mg/cc; pulp MD is lower than most hard tissues (<xref ref-type="fig" rid="F1">Figure 1D</xref>). However, on occasion, the highest MD (molar in <xref ref-type="fig" rid="F1">Figure 1</xref>, MD: 1,757 &#x000B1; 361 mg/cc) of mineralized pulp was greater than that of human dentin (1,540 &#x000B1; 5 mg/cc).</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p><bold>The density of minerals in a unit volume of mineralizing pulp are heterogeneously distributed regardless of tooth type: the incisors, premolars, and molars. (A)</bold> Reflection and transmission light micrographs of sectioned teeth illustrate white and dark regions around the root canals (arrows point to the location of the pulp). <bold>(B)</bold> Varying mineral densities (MD) in digitally segmented volumes of mineralized pulp become apparent in the transverse sections (asterisks &#x0002A;, &#x0002A;&#x0002A;, &#x0002A;&#x0002A;&#x0002A;) of pulp (red arrowhead points to dentin-pulp interface&#x02014;see <bold>Figure 3</bold>). <bold>(C)</bold> Normalized frequency of MD of pulp and <bold>(D)</bold> comparison of mineralized pulp and other mineralized tissues from humans including enamel, dentin, cementum, alveolar bone, hydroxyapatite (HA), and cortical bone are shown. The colored MD curves are patient-specific.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fdmed-03-883336-g0001.tif"/>
</fig>
</sec>
<sec>
<title>Root Canal, Radicular Mineralized Pulp, Cementum Pore Distribution, and Accessory Channels in Roots</title>
<p>The root canal (RC, blue), mineralized pulp (MP, white), accessory channels, and pores (red) in cementum with three transverse sections (top, middle, bottom) from three different teeth are shown (<xref ref-type="fig" rid="F2">Figures 2A&#x02013;C</xref>). These digitally reconstructed volumes illustrated more lateral channels and cementum pores in teeth with less mineralized pulp (a, first column). Higher mineral density regions (dotted circle, <bold>D</bold>) adjacent to the root canal were observed from the root canal through dentin into cementum (<xref ref-type="fig" rid="F2">Figure 2D</xref>). The mineral density distributions and cementum thicknesses were different between roots (<xref ref-type="fig" rid="F2">Figure 2D</xref>). Volumes of mineralized pulp and cementum pore diameters are summarized in table (<xref ref-type="fig" rid="F2">Figure 2E</xref>). Roots with less mineralized pulp contained cementum pores of larger diameters [box plots with higher standard variation (<xref ref-type="fig" rid="F2">Figure 2F</xref>)]. Occluded tubules with nano/micro particles (red arrowhead) inside dentin tubules adjacent to pulp, and thickening of peritubular dentin also resulting in narrowing of lumen in the dentin (<xref ref-type="fig" rid="F2">Figure 2G</xref>) were observed. See <xref ref-type="supplementary-material" rid="SM2">Supplementary Movie S1</xref>.</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p><bold>Mineralizing tooth roots with decreased cementum and dentin porosities also contained pulp with higher mineral density</bold>. Root canals (blue), mineralizing pulp (white) <bold>(A&#x02013;C)</bold>, and pores in cementum (red) with three X-ray slices (top, middle, bottom) from different roots <bold>(A&#x02013;C)</bold> show the spatial relation between root canal system with mineralizing/mineralized pulp. Mineral density plot profiles from root canal to cementum expressed in gray scale illustrated higher mineral density regions (dotted circle, <bold>D</bold>) adjacent to the root canal, and various mineral density distributions and cementum thicknesses for different roots <bold>(D)</bold>. More lateral root canals and pores in cementum (red arrows in X-ray tomograms/top, middle and bottom sections) were observed in less mineralized pulp <bold>(E,F)</bold>. Tubules in dentin with nano/micro-mineralized occlusions (red arrowhead) were found adjacent to mineralizing pulp <bold>(G)</bold>.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fdmed-03-883336-g0002.tif"/>
</fig></sec>
<sec>
<title>Immunolocalization of Neurovascular Bundles and Osteogenic Proteins in Mineralized Pulp</title>
<p>Higher mineral density at the DPI, and relatively lower mineral density away from the DPI were observed in representative transverse X-ray tomogram (<xref ref-type="fig" rid="F3">Figures 3A</xref>,a). Lower cell densities (H&#x00026;E, b) and blood vessels within collagenous matrix (MT, c) were surrounded by mineralized regions (von Kossa, <xref ref-type="fig" rid="F3">Figures 3A</xref>,d). Odontoblasts, odontoblasts processes, and dentin tubules (red rectangle in b illustrates) in physical association with the DPC [red arrowhead in X-ray and light micrographs, (<xref ref-type="fig" rid="F3">Figure 3A</xref>)] were observed. Acidic proteins, OCN, and OPN were localized around vasculature (<xref ref-type="fig" rid="F3">Figures 3A</xref>,e,f). Localization of anti-protein gene product (PGP) 9.5 (<xref ref-type="fig" rid="F3">Figures 3A</xref>,g) and &#x003B1;-SMA (<xref ref-type="fig" rid="F3">Figures 3A</xref>,h) illustrated the proximity of neurovascular bundles within mineralized regions (<xref ref-type="fig" rid="F3">Figures 3A</xref>,g). The localization of PGP 9.5 (b), OPN (c), OCN (d) (brown DAB stain counterstained with Gill&#x00027;s hematoxylin) (<xref ref-type="fig" rid="F3">Figure 3B</xref>) in the extra cellular matrix of pulp was visualized using CLEM. Spatial association of PGP 9.5 immunolocalized nerves with &#x003B1;-SMA positive blood vessels are shown between light and SEM micrographs (<xref ref-type="fig" rid="F3">Figure 3C</xref>). The immunolocalization of PGP 9.5 in the nerve bundles (PGP 9.5) and &#x003B1;-SMA in the blood vessels in association with OSX, BSP osteogenic molecules in the mineralized volumes (as asterisk showed in each image) within pulp (<xref ref-type="fig" rid="F3">Figure 3C</xref>) were observed. However, OCN, OPN, BSP, and OSX, were not expressed in controls (unmineralized pulp) (<xref ref-type="supplementary-material" rid="SM1">Supplementary Figure S1</xref>).</p>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p><bold>Acidic molecules are contained within the minerals and the matrix of mineralizing pulp. (A)</bold> Digital volume illustrates the location of mineralized pulp (inside the box outlined in orange). (a) Minerals of varying densities are shown in transverse X-ray tomogram (outlined white rectangle) and corresponding histologic and immunohistologic sections with a visible dentin-pulp interface (red arrowhead) are shown (b&#x02013;h). Light micrographs (LM) illustrate odontoblast cells relative to fibroblasts and other cells in the mineralizing matrix in hematoxylin and eosin (H&#x00026;E, b; Red box contains dentin-pulp interface with corresponding cells), collagenous regions in Masson&#x00027;s trichrome (c), and mineralizing regions in von Kossa (d) stained sections. Osteocalcin (OCN, e), osteopontin (OPN, f), protein gene product 9.5 (PGP9.5, g), and &#x003B1;-smooth muscle actin (&#x003B1;-SMA, h) are localized in the blood vessels and nerves of the mineralizing pulp. <bold>(B)</bold> Histologic stains for mineral using von Kossa (a), and immunolocalization of PGP9.5 (b), OPN (c), and OCN (d) antigens are visible in the mineralized objects within the organic extracellular matrix of nerves and blood vessels. The corresponding extracellular matrix of the immunolocalized proteins are shown in electron micrographs to the right. <bold>(C)</bold> Nerve bundles (PGP 9.5) and blood vessels (&#x003B1;-SMA) in association with osteogenic molecules osterix and bone sialoprotein (OSX, BSP) within pulp were immunolocalized. BV, blood vessel; N, nerve; M, mineralizing tissue; LV, lymphatic vessels; red arrowhead points to the dentin-pulp interface (DPI). Immunolocalization of the same proteins, but in unmineralized pulp are shown in <xref ref-type="supplementary-material" rid="SM1">Supplementary Figure S1</xref>.</p></caption>
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</fig></sec>
<sec>
<title>Surface Morphology and Structural Composition of Partially and Fully Mineralized Pulp</title>
<p>Diffused mineralization as noted previously by others also was observed in pulp (<xref ref-type="bibr" rid="B1">1</xref>). Nerves (N) and blood vessels (BV) were adjacent to mineralizing tissue that contained collagen fibrils with electron dense particles (red arrows, <xref ref-type="fig" rid="F4">Figure 4A</xref>). Nanometer sized plate-like particles (<xref ref-type="fig" rid="F4">Figure 4A</xref>), and aggregates of these plate-like particles in the macroscale mineralized collagenous constructs (red arrows, <xref ref-type="fig" rid="F4">Figure 4A</xref>) were identified. The higher MD pulp contained mineralized bundles of organic tissue (<xref ref-type="fig" rid="F4">Figure 4B</xref>), and collagen with intrafibrillar mineral (<xref ref-type="fig" rid="F4">Figure 4B</xref>).</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p><bold>Blood vessels, nerves, electron dense particulates, and collagen with intrafibrillar mineral are contained in partially and fully mineralized pulp. (A)</bold> Cells, blood vessels, and nerves were observed within mineralizing pulp (red arrows). <bold>(B)</bold> Dense collagen bundles with collagen fibrils and electron dense particles also were observed in macroscale mineralizing and mineralized collagenous pulp.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fdmed-03-883336-g0004.tif"/>
</fig></sec>
<sec>
<title>Correlative Microspectroscopy Using Micro XCT, and X-Ray Fluorescence Microprobe and Energy Dispersive X-Ray Spectroscopy Techniques</title>
<p>Mineralized regions of pulp expressed higher counts of Ca, P, and Zn (<xref ref-type="fig" rid="F5">Figure 5A</xref>). Dentin expressed higher Ca and P, and higher counts of Zn at the DPI. Higher counts of Zn however, were observed in and within intact pulp in the DPC (<xref ref-type="fig" rid="F5">Figure 5B</xref>). Atomic percentages of elements (Ca, P, Mg, Na, F, C, N, S, O) at locations 1, 2 and 3 are summarized in the table (<xref ref-type="fig" rid="F5">Figure 5A</xref>). Ca and P counts inside pulp (location 1, pulp, green rectangle) were lower than those from intertubular (location 2), and mineralized particles within dentinal tubules (location 3). However, elemental contents of intertubular dentin (location 2) and particles (location 3) within the dentinal tubules were similar. Atomic percentage of Mg in particles within the tubules (location 3) was higher than minerals in intertubular dentin (location 2) (<xref ref-type="fig" rid="F5">Figure 5A</xref>).</p>
<fig id="F5" position="float">
<label>Figure 5</label>
<caption><p><bold>Zinc and magnesium were co-localized in dentin-pulp complex (DPC). In particular, trace elements were colocalized at the dentin-pulp interface (DPI), within mineralized pulp, and in tubular occlusions within dentin. (A)</bold> (Top row, Left to right) Spatial maps of heterogeneous mineral densities (micro-XCT), matrix structure Dentin-pulp interface - DPI and regions 1-3, SEM), and element counts (calcium, phosphorus, magnesium and zinc counts) of root canal (outlined in dashed lines) and pulp from three different patients (left, volumes of pulp&#x02014;a&#x02013;c) are shown. DPI (yellow box, XRF maps) express higher zinc and calcium counts, but pulp (green box) also contains phosphorus (regions of white in green box, and pulp a&#x02013;c, right). (Middle row, Left to right) The DPI with dentin and its occluded tubule contains particulates (yellow arrows) with higher Mg counts (red star at location 3, red graph to the right). Inter-tubular dentin however, contains lower Mg (blue star at location 2, blue graph to the right) counts but higher than Zn-rich mineralized pulp. (Bottom row) Atomic percentages of elements at locations (1, 2, and 3) are shown in the table. Ca and P contents of location 1 are different from those at locations 2 and 3, and elemental contents of 2 and 3 are similar. Atomic percentage of Mg at location 3 is slightly higher than location 2. <bold>(B)</bold> Top three rows: Spatial elemental maps from regions 1 (low), 2 (medium) and 3 (high) mineralized extracted pulp contain spherulitic minerals of higher counts of C in less mineralized regions, and aggregates of these spherulitic minerals with higher counts of Zn, Ca, P, and Mg in more mineralized regions of the same pulp. Fourth row: X-ray spectra illustrate energy peaks of elements (Ca, P, Mg, Na, F, C, N, S, O, Zn) from lower (1), medium (2) and higher (3) mineral density regions. Atomic percentages of elements at these locations in maps 1&#x02013;3 are summarized in table (fifth row). Bottom row (bar charts): Principal component analysis illustrated phases 1, 2 and 3 (P1&#x02013;P3) in lower, medium and higher mineral density regions of pulp with significant variances in C, P, Ca, S, and Mg. The first phase P1 accounts for more than 70% of the variance in lower, medium, and higher mineral density regions of pulp. In the lower mineral density pulp in map 1, C counts per pixel are the highest in P1 (yellow). With increasing mineral density of pulp, Ca and P counts per pixel are highest in P3 (blue) for map1, and highest in P1 for maps 2 and 3; S counts per pixel are highest in P2 (green) for map1, and P3 for maps 2 and 3. XRF units are in counts; mineral density units are in mg/cc; CPS, counts <italic>per second</italic>.</p></caption>
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</fig>
<p>Nano- and micro-spherical minerals in less mineralized regions and aggregates of mineralized spherical particles in regions with increasing mineral densities (<xref ref-type="fig" rid="F5">Figure 5B</xref>) were observed. Phase analyses of maps 1&#x02013;3 revealed the dominance of C in less mineralized regions (map 1), and Ca and P dominance in mineralizing regions (maps 2 and 3). More importantly, the particulates in map 1 contained Ca and P, and were phase separated from regions that were dominated with C counts. In maps 2 and 3, regions with higher counts of Ca and P, but lower C counts increased (<xref ref-type="fig" rid="F5">Figure 5B</xref>). Atomic percentages of elements (Ca, P, Mg, Na, F, C, N, S, O, Zn) at these locations (map 1, map 2, and map 3) are summarized in <xref ref-type="fig" rid="F5">Figure 5</xref>. Higher contents of Ca, P, Mg, and F also were detected in pulp with higher MD. Zn also was observed in pulp with relatively higher mineral density regions (<xref ref-type="fig" rid="F5">Figure 5</xref>).</p></sec></sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>The sequelae that can help explain pathophysiology of tissues are often amiss. Pulp investigated in this study was from non-carious teeth that were extracted for orthodontic or prosthodontic reasons, with no <italic>prior</italic> information. The tissues of teeth are routinely subjected to insults in multiple ways. Acute and chronic tissue responses to insults (mechanical, chemical, and/or microbial loads) (<xref ref-type="bibr" rid="B1">1</xref>, <xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B12">12</xref>, <xref ref-type="bibr" rid="B14">14</xref>) are often registered as spatial (macroscale DPC, microscale tissue/matrix/cell, and nanoscale particulate/biomoelcular levels) and temporal (short and long-term that can be connected to acute and chronic inflammatory cascades) adaptations. These adaptations are often mapped as changes in physicochemical, and biochemical characteristics using multiple high resolution microscopy and spectroscopy techniques. Higher mineral densities but lower fracture resistance of dentin with age (<xref ref-type="bibr" rid="B27">27</xref>&#x02013;<xref ref-type="bibr" rid="B30">30</xref>), decreased dentin permeability resulting from microbial attack (<xref ref-type="bibr" rid="B14">14</xref>, <xref ref-type="bibr" rid="B31">31</xref>), and increased loss in tooth-sensitivity with increased cuspal attrition (<xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B14">14</xref>) all are adapted characteristics of dentin. The white-reflecting and dark-opaque features in dentin encircling root canals in <xref ref-type="fig" rid="F1">Figure 1</xref> indicated that, dentin indeed has adapted to conditions other than normal (<xref ref-type="bibr" rid="B1">1</xref>, <xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B12">12</xref>, <xref ref-type="bibr" rid="B14">14</xref>, <xref ref-type="bibr" rid="B31">31</xref>&#x02013;<xref ref-type="bibr" rid="B35">35</xref>). Although the spatial distribution of nerves in mammals has been documented to be tooth-function specific (<xref ref-type="bibr" rid="B36">36</xref>), consistent non-specificity of mineralized pulp to tooth type suggested that the biomineralization pathway need not be specific to tooth type (incisors to molars) and location (anterior to posterior) in the jaw. Despite, increased volumes of mineralized pulp were mostly observed in the apical portion (<xref ref-type="bibr" rid="B37">37</xref>) revealing a plausible macroscale effect of tooth architecture (<xref ref-type="bibr" rid="B37">37</xref>) on pulp mineralization.</p>
<p>Much of pulp mineralization at a tooth-level or a DPC-level (macroscale) can be guided by fluid flow which is governed by the general laws of physics (Poiseuille&#x00027;s and Darcy&#x00027;s laws) (<xref ref-type="bibr" rid="B38">38</xref>, <xref ref-type="bibr" rid="B39">39</xref>) and chemistry (van&#x00027;t Hoff&#x00027;s osmotic pressure and Fick&#x00027;s diffusion) (<xref ref-type="bibr" rid="B40">40</xref>, <xref ref-type="bibr" rid="B41">41</xref>). These fundamental laws illustrate that for small changes in physical features such as root canal (R) radius, dentin tubule radius and length (r, L), interstitial fluid viscosity (&#x003BC;), and concentrations of chemical constituents (C<sub>1</sub>, C<sub>2</sub>, C<sub>n</sub>), significant shifts in pressure and chemical gradients can occur. These shifts in pressure and chemical gradients can alter the rates of volume flow across a unit area of a tissue. Based on the structural interconnectedness between dentin and pulp, and dentin and cementum (<xref ref-type="bibr" rid="B15">15</xref>), the observed changes in dentin (particulate growth and/or increased pertubular dentin production) and cementum (decreased permeabilities) could result in changes in interstitial fluid pressure (<xref ref-type="bibr" rid="B4">4</xref>, <xref ref-type="bibr" rid="B42">42</xref>, <xref ref-type="bibr" rid="B43">43</xref>) of the softer pulp. These laws also explain that changes in (1) pressure and chemical gradients at a tooth-level and (2) dentin and cementum permeabilities at a tissue-level can &#x0201C;drive&#x0201D; the rates of heterogenous and/or homogenous nucleation and subsequent mineralization of an organic matrix even in the absence of cells (<xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B45">45</xref>) (<xref ref-type="fig" rid="F6">Figure 6</xref>). Fundamental physical chemistry experiments have illustrated that osteogenic molecules such as OCN and BSP in the absence of cells can act as nucleators and in association with collagen can facilitate heterogeneous nucleation, and apatite formation (<xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B45">45</xref>). Collectively, these changes in physicochemical, and biochemical chactersitics revealed the interconnected vulnerabilities between the seemingly disparate hard and soft tissues even in the absence of cells.</p>
<fig id="F6" position="float">
<label>Figure 6</label>
<caption><p>Insights into Pulp Biomineralization Pathways: <bold>(I)</bold> DPC-level (macrometer size): Mineralization can be guided by fluid flow; governed by the general laws of physics (Poiseuille&#x00027;s and Darcy&#x00027;s) and chemistry (van&#x00027;t Hoff&#x00027;s osmotic pressure &#x00026; Fick&#x00027;s diffusion). <bold>(II)</bold> Small changes in physical features of the root canal (R) radius, and dentin tubule radius and length (r, L), interstitial fluid viscosity (&#x003BC;), and concentrations chemical constituents (C<sub>1</sub>, C<sub>2</sub>, C<sub><italic>n</italic></sub>), can result in significant shifts in pressure and chemical gradients. <bold>(III)</bold> Structural interconnectedness between dentin and pulp (DPI), the observed changes in dentin (particulate growth and/or increased matrix production) permeability will result in changes in interstitial fluid pressure of the softer pulp. <bold>(IV)</bold> These shifts in pressure and chemical gradients can alter the IFP, and rates of volume flow across a unit area of a tissue. <bold>(V)</bold> These laws also explain that changes in 1) pressure and chemical gradients at a tooth-level, and 2) dentin permeabilities at a tissue-level can &#x0201C;drive&#x0201D; the rates of heterogenous and/or homogenous nucleation and subsequent mineralization of an organic matrix even in the absence of cells.</p></caption>
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</fig>
<p>In the presence of cells, the observed correlations between physical and chemical features (<xref ref-type="fig" rid="F2">Figure 2</xref>) of dentin, cementum, and pulp revealed macroscale culprits that could potentiate microanatomical self-governing regions (<xref ref-type="fig" rid="F1">Figures 1</xref>, <xref ref-type="fig" rid="F2">2</xref>) in the insulted pulp. The narrowed orifice at the root-tip also can potentiate the already inflammed pulp via capillary stragulation (<xref ref-type="bibr" rid="B4">4</xref>). However, in a partially mineralized pulp at locations farther away from the sphere of influence of insults (top, middle, bottom sections, <xref ref-type="fig" rid="F4">Figure 4</xref>), the built-in control system can &#x0201C;erase&#x0201D; the initial inflammatory effects of the insults and reverse the local interstitial fluid pressures to homeostasis. On the other hand, chronic response to sustained insults can &#x0201C;tip&#x0201D; this balance toward a sustained inflammatory mode, and consequently an irreversible state. The subsequent changes in pressure gradients at the tissue and organ levels can contribute to various mechano- and chemo-biological events, and plausibly, different biomineralization pathways. Specifically, the most noted mechano-chemo-sensing biomineralization pathways involve the production of osteogenic proteins as nucleators (<xref ref-type="bibr" rid="B46">46</xref>&#x02013;<xref ref-type="bibr" rid="B49">49</xref>) through (1) increased vasodilation by &#x0201C;mechanically strained&#x0201D; endothelial cells (<xref ref-type="bibr" rid="B4">4</xref>, <xref ref-type="bibr" rid="B50">50</xref>, <xref ref-type="bibr" rid="B51">51</xref>); (2) compromised capillary pressures and pericyte stimulation (<xref ref-type="bibr" rid="B50">50</xref>, <xref ref-type="bibr" rid="B52">52</xref>) resulting in a sustained increase in interstitial fluid pressure within the pulp; and (3) capillary strangulation resulting in hypoxic conditions and reactive oxygen species (ROS) (<xref ref-type="bibr" rid="B4">4</xref>, <xref ref-type="bibr" rid="B53">53</xref>).</p>
<p>Studies have already shown an obvious reduction of pulpal blood flow and marked histologic changes in the pulp as a result of intrusive orthodontic forces (<xref ref-type="bibr" rid="B16">16</xref>); pulp canal obliteration appears to be a sequel to revascularization and/or reinnervation of a damaged pulp after traumatic injury (<xref ref-type="bibr" rid="B54">54</xref>). Inflammatory biomarkers including matrix metalloproteases and neuropeptides are released by traumatic, orthodontic, thermal, and chemical insults. The function of MMPs and neuropeptides are dependent on the catalytic or co-factor functions of various heavy metals including Zn<sup>2&#x0002B;</sup> (<xref ref-type="bibr" rid="B55">55</xref>&#x02013;<xref ref-type="bibr" rid="B59">59</xref>). Increased expressions of neuropeptides including calcitonin gene-related peptide (CGRP) can alter vascular function and interstitial fluid pressure, but do so locally within the tissues of the pulp (<xref ref-type="bibr" rid="B60">60</xref>). The finding of silver nitrate (von Kossa) positive minerals around the &#x003B1;-SMA positive blood vessels and PGP 9.5 positive nerves (<xref ref-type="fig" rid="F2">Figure 2B</xref>) is suggestive of neurovascular involvement, a potential culprit in pathophysiology of pulp tissue mineralization.</p>
<p>Localization of SIBLING proteins, OPN and BSP, and OCN around &#x003B1;-SMA vasculature and PGP 9.5 positive nerves, furthermore provided insights into the plausible roles of neurovasculature and osteogenic proteins (<xref ref-type="bibr" rid="B61">61</xref>, <xref ref-type="bibr" rid="B62">62</xref>) on controlled mineralization of collagen albeit pathologic in nature. SIBLINGs express themselves in regions that are mechanically challenged, not necessarily as mineral forming, but also as mineral inhibiting proteins. OPN is one such plasma protein whose intrinsic function as an inhibitor of mineralization also is central to the biomineralization pathway; its involvement could be to control mineral growth albeit pathologic as discussed in various studies <italic>in vitro</italic> and <italic>in vivo</italic> (<xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B45">45</xref>, <xref ref-type="bibr" rid="B63">63</xref>, <xref ref-type="bibr" rid="B64">64</xref>). Electron dense particles (<xref ref-type="fig" rid="F3">Figure 3</xref>) and diffused nanometer sized plate-like minerals located within the macroscale mineralizing collagenous constructs, and as intrafibrillar mineral (<xref ref-type="fig" rid="F3">Figure 3A</xref>) confirmed heterogeneous nucleation within pulp. OCN is expressed in fibroblast-like cells of the pulp (<xref ref-type="bibr" rid="B65">65</xref>), and has been shown to influence specifically intrafibrillar mineralization of collagen (<xref ref-type="bibr" rid="B66">66</xref>). OSX is a Zn finger transcription factor and plays an important role in pre-differentiated osteoblasts (<xref ref-type="bibr" rid="B67">67</xref>). As an upstream marker in the osteogenic signaling pathway, OSX also could modulate the expressions of OPN, OCN, and the more downstream marker BSP (<xref ref-type="bibr" rid="B67">67</xref>, <xref ref-type="bibr" rid="B68">68</xref>). However, we contend that its presence is more central to the nerve, as data alludes to pulp mineralization as ectopic mineralization, and not necessarily heterotopic ossification (no osteocytes were observed).</p>
<p>It should not come too much as a surprise that Zn was observed, as its localization is central to most sterile and non-sterile inflammatory pathways. Inflammation encourages vesicular transport of Zn and Mg or as bions in biological fluids (<xref ref-type="bibr" rid="B48">48</xref>, <xref ref-type="bibr" rid="B69">69</xref>, <xref ref-type="bibr" rid="B70">70</xref>). These spherulitic structures also could be associated with local tissue mineralization (<xref ref-type="fig" rid="F5">Figure 5</xref>). Additionally, extracellular spherulitic bodies including exosomal and apoptotic bodies with sizes ranging from &#x0003C;50 nm to greater than microns continue to be observed in vascular plaques in multiple anatomical locations in humans (heart, kidney, brain) (<xref ref-type="bibr" rid="B71">71</xref>&#x02013;<xref ref-type="bibr" rid="B75">75</xref>). However, studies identifying mechanisms of interaction between extracellular vesicles and collagen driving the formation of micro/macro mineralization in tissue constructs are warranted.</p>
<p>Zn also is involved in downstream biomineralization events especially related to hypoxia induced by ischemia (i.e., HIF, NF-&#x003BA;B) (<xref ref-type="bibr" rid="B53">53</xref>, <xref ref-type="bibr" rid="B76">76</xref>&#x02013;<xref ref-type="bibr" rid="B79">79</xref>); all of which condition the tissue biochemistry and facilitate passive or active recruitment of Ca<sup>2&#x0002B;</sup> and <inline-formula><mml:math id="M1"><mml:msubsup><mml:mrow><mml:mtext>PO</mml:mtext></mml:mrow><mml:mrow><mml:mn>4</mml:mn></mml:mrow><mml:mrow><mml:mn>3</mml:mn><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:math></inline-formula> ions. Changes in interstitial fluid pressure can alter hemodynamic and vascular mechanotransduction, induce osteogenic protein production, shift oxygen tension, and generate ROS. Further research on hemodynamic force-induced inflammation in association with ROS facilitated by Zn will be necessary to elucidate yet another mechanism of pathologic mineralization, but under ischemic conditions [oxygen tension resulting from insufficient blow flow, specifically capillary strangulation (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B4">4</xref>) at the root apices]. Given all the many discussed pathways that would result in pathologic biominerals in pulp, confirmation of highly probable pathways at local tissue- and tooth-levels through niche-specific simulation studies are highly warranted.</p></sec>
<sec sec-type="conclusions" id="s5">
<title>Conclusion</title>
<p>Spatial colocalization of physicochemical and biomolecular compositions of biominerals in an already existing neurovascular pulpal matrix, suggest primary and secondary biomineralization pathways. Primary pathways are specific to the tissues of the pulp and dentin, and secondary pathways are defined by the aggregate effects of the primary but at an organ level. Primary pathways include shifts in hemodynamic and interstitial fluid pressures also by sterile stimuli (i.e., mechanical, chemical, thermal) that illicit neurogenic inflammation, a process that could alter normal neural and vascular functions. These shifts in tissue compliance resulting from interstitial fluid pressure change also can differentiate various cells including pericytes, endothelial, and other resident stem cells into an osteogenic lineage and consequently promote biomineralization locally within the pulp. Reduction in permeability and oxygen tension resulting from occluded dentin tubules and lateral canals, and altered tooth architecture can further stimulate ischemic events and ROS. The presence of Zn expressions in mineralized pulp is further suggestive of Zn-related biochemical pathways being central to mineralization of the DPC. Regardless, mapping niche-specific upstream and downstream biomarkers are critical toward formulating functional assays that would guide translational approaches to mitigate primary and secondary pathologic biomineralization pathways. Furthermore, from a clinical viewpoint, these observations in pulp underpin the short and long-term prognosis of a tooth receiving anesthetic, restorative, periodontal, and/or orthodontic treatment, and can inform clinicians the subtleties related to pulpitis, dentin-bridge, and pulp stone formation.</p></sec>
<sec sec-type="data-availability" id="s6">
<title>Data Availability Statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s11">Supplementary Material</xref>, further inquiries can be directed to the corresponding author.</p></sec>
<sec id="s7">
<title>Ethics Statement</title>
<p>The studies involving human participants were reviewed and approved by Human Research Protection Program Institutional Review Board of UCSF (Study Number: 16-19606). Written informed consent for participation was not required for this study in accordance with the national legislation and the institutional requirements.</p></sec>
<sec id="s8">
<title>Author Contributions</title>
<p>RH contributed to study design, data acquisition, in particular, immunohistochemistry, electron microscopy, and correlative light and electron microscopy. CC contributed to clinical input, editing, and preparing <xref ref-type="fig" rid="F6">Figure 6</xref>. MS contributed to editing. MK contributed to writing, data acquisition, analysis, interpretation of data specific to micro CT related scans, energy dispersive X-ray analysis, and correlative microscopy. SH contributed to study design, data interpretation, prepared <xref ref-type="fig" rid="F6">Figure 6</xref>, wrote, edited, revised, and critically reviewed the manuscript with all authors. All authors gave final approval and agree to be accountable for all aspects of the work.</p></sec>
<sec sec-type="funding-information" id="s9">
<title>Funding</title>
<p>This research was funded by the Program in Biomineralization Studies (PiBiomS), Departments of Preventive and Restorative Dental Sciences, and Urology, Schools of Dentistry and Medicine, UCSF. PiBiomS is a partnership between the Schools of Dentistry and Medicine at UCSF to investigate the cause of various pathologic biominerals in humans.</p>
</sec>
<sec sec-type="COI-statement" id="conf1">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p></sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x00027;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p></sec>
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<ack><p>The authors thank Dr. Sulyanto for her feedback and clinical input. The authors thank Ms. Grace Nonomura for her help in specimen preparation, and the Biomaterials and Bioengineering Correlative Microscopy Core (<ext-link ext-link-type="uri" xlink:href="http://bbcmc.ucsf.edu">http://bbcmc.ucsf.edu</ext-link>), UCSF for the use of their MicroXCT-200 and SIGMA 500-VP Field Emission Electron Microscope&#x02014;Scanning and Transmission. This research used beamline 10.3.2 of the Advanced Light Source, a Department of Energy Office of Science user facility under contract DE-AC02-05CH11231. The authors would like to acknowledge Dr. Sirine Fakra for her help and assistance at beamline 10.3.2. <xref ref-type="fig" rid="F6">Figure 6</xref> was partly generated using icons in <ext-link ext-link-type="uri" xlink:href="https://Biorender.com/">Biorender.com</ext-link>.</p>
</ack>
<sec sec-type="supplementary-material" id="s11">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fdmed.2022.883336/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fdmed.2022.883336/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Image_1.TIF" id="SM1" mimetype="image/tif" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Figure S1</label>
<caption><p>Immunostains for OCN, OPN, BSP, and OSX in unmineralized pulp.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Video_1.MP4" id="SM2" mimetype="video/mp4" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Movie S1</label>
<caption><p>Movie illustrates pulp from three patients. Left to right illustrate low (control), medium, and high mineral densities of pulp, along with dentin and cementum respectively.</p></caption>
</supplementary-material></sec>
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