<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Chem.</journal-id>
<journal-title>Frontiers in Chemistry</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Chem.</abbrev-journal-title>
<issn pub-type="epub">2296-2646</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fchem.2014.00107</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Chemistry</subject>
<subj-group>
<subject>Original Research Article</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Variation in the expression of ergot alkaloids between individual tillers of perennial ryegrass</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Mace</surname> <given-names>Wade J.</given-names></name>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://community.frontiersin.org/people/u/133566"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Lunn</surname> <given-names>Kristy L.</given-names></name>
<uri xlink:href="http://community.frontiersin.org/people/u/185292"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Kaur</surname> <given-names>Navjot</given-names></name>
</contrib>
<contrib contrib-type="author">
<name><surname>Lloyd-West</surname> <given-names>Catherine M.</given-names></name>
</contrib>
</contrib-group>
<aff><institution>Grasslands Research Centre, AgResearch Limited</institution> <country>Palmerston North, New Zealand</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: James Levi Klotz, United States Department of Agriculture - Agricultural Research Service, USA</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Jiaoyang Jiang, University of Wisconsin-Madison, USA; Daniel Panaccione, West Virginia University, USA</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: Wade J. Mace, Grasslands Research Centre, AgResearch Limited, Private Bag 11008, Palmerston North 4442, New Zealand e-mail: <email>wade.mace&#x00040;agresearch.co.nz</email></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to Chemical Biology, a section of the journal Frontiers in Chemistry.</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>24</day>
<month>11</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="collection">
<year>2014</year>
</pub-date>
<volume>2</volume>
<elocation-id>107</elocation-id>
<history>
<date date-type="received">
<day>19</day>
<month>09</month>
<year>2014</year>
</date>
<date date-type="accepted">
<day>05</day>
<month>11</month>
<year>2014</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2014 Mace, Lunn, Kaur and Lloyd-West.</copyright-statement>
<copyright-year>2014</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract><p><italic>Epichlo&#x000EB;</italic> fungal endophytes of cool season grasses are well-known to produce a range of alkaloids of benefit to the host. Some of these compounds are advantageous to agriculture due to qualities that promote pasture persistence (e.g., the loline class of alkaloids confer insect protection) while others are detrimental to the well-being of grazing livestock. The ergot alkaloids (e.g., ergovaline), produced in ryegrass and tall fescue associations, causes poor animal health in farming regions in many countries around the world and further study is required to improve our knowledge on this class of compounds. Here we present the application of a quantitative LC-MS/MS (liquid chromatography coupled to mass spectrometry) method measuring eight ergot alkaloids (chanoclavine, agroclavine, elymoclavine, lysergol, lysergic acid, ergine, lysergyl-alanine, ergovaline) produced by endophyte infected grasses, to monitor levels in individual tillers from multiple plants of a single cultivar of perennial ryegrass (<italic>Lolium perenne</italic> cv. &#x0201C;Grasslands Samson&#x0201D;) infected with a common toxic endophyte strain (<italic>Epichlo&#x000EB; festucae</italic> var. <italic>lolii</italic>). Monitoring the expression in individual tillers allows an estimation of the variability within a plant (between tillers) as well as between plants. The study showed that there is significant variation in the concentration of the ergot alkaloids between tillers of a single plant, at or exceeding the level of variation observed between individual plants of a population. This result emphasizes the fundamental importance of robust experimental design and sampling procedures when alkaloid expression assessment is required and these need to be rigorously tailored to the hypothesis being tested.</p></abstract>
<kwd-group>
<kwd>ergot alkaloids</kwd>
<kwd>quantitation</kwd>
<kwd><italic>Lolium perenne</italic></kwd>
<kwd>endophyte</kwd>
<kwd>liquid chromatography-mass spectroscopy</kwd>
</kwd-group>
<counts>
<fig-count count="3"/>
<table-count count="6"/>
<equation-count count="1"/>
<ref-count count="19"/>
<page-count count="6"/>
<word-count count="3706"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="introduction" id="s1">
<title>Introduction</title>
<p>Fungal endophytes of cool season grasses, the <italic>Epichlo&#x000EB;</italic> &#x0201C;endophytes,&#x0201D; are well-known for their production of bioactive alkaloids and the benefits these compounds confer to their plant hosts (Bush et al., <xref ref-type="bibr" rid="B4">1997</xref>; Kuldau and Bacon, <xref ref-type="bibr" rid="B8">2008</xref>). Aside from those alkaloids that protect the plant from insect herbivory (Breen, <xref ref-type="bibr" rid="B3">1994</xref>), these endophytes also produce alkaloid toxins active against mammalian herbivores (Schmidt and Osborn, <xref ref-type="bibr" rid="B15">1993</xref>) such as the indole diterpene, lolitrem B and the ergot alkaloid, ergovaline. In an agricultural context these toxins are undesirable due to their detrimental health effects to grazing animals and subsequent profitability of the farming enterprise (Hoveland, <xref ref-type="bibr" rid="B6">1993</xref>).</p>
<p>Artificially created perennial ryegrass/endophyte associations, or novel associations, are a key factor in New Zealand&#x00027;s agri-business success (Johnson et al., <xref ref-type="bibr" rid="B7">2013</xref>). This is due to the ability to create novel associations that are absent of the detrimental endophyte toxins (most importantly lolitrem B) and the associated animal ill-health while still possessing advantageous traits like insect deterrent compounds (such as peramine). Similarly, tall fescue/endophyte associations, which lack the production of ergovaline, are available in the USA (Bouton et al., <xref ref-type="bibr" rid="B2">2002</xref>). But the dominance of the natural tall fescue/endophyte associations, which produces ergovaline, still has a significant impact on animal health in North American agriculture. Hence there has been (and continues to be) significant research into the effects of the ergot alkaloids (predominantly ergovaline) on animal health (Schmidt and Osborn, <xref ref-type="bibr" rid="B15">1993</xref>), physiological response, mode of action, management practices that can mitigate animal health impacts, seasonal expression (Rogers et al., <xref ref-type="bibr" rid="B14">2011</xref>), and distribution <italic>in planta</italic> (Spiering et al., <xref ref-type="bibr" rid="B17">2002</xref>).</p>
<p>While ergovaline has been the main focus, it is important to consider the other ergot alkaloids that are expressed with ergovaline in the various perennial ryegrass and tall fescue endophyte associations. Figure <xref ref-type="fig" rid="F1">1</xref> shows the a range of the ergot alkaloids that can be detected in extracts of cool season grasses infected with <italic>Epichlo&#x000EB;</italic> endophytes. Ergine and lysergyl-alanine are likely byproducts of the lysergyl peptide lactam intermediate (Panaccione et al., <xref ref-type="bibr" rid="B11">2003</xref>), and as shown by the results of the current study, can comprise a significant proportion of the ergot alkaloids expression in perennial ryegrass/endophyte associations.</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p><bold>Ergot alkaloids that can be detected in cool season grasses infected with <italic>Epiclo&#x000EB;</italic> endophytes; chanoclavine (1), agroclavine (2), elymoclavine (3), lysergol (4), lysergic acid (5), ergine (6), lysergyl-alanine (7), and ergovaline (8)</bold>.</p></caption>
<graphic xlink:href="fchem-02-00107-g0001.tif"/>
</fig>
<p>Research has been undertaken into the distribution of endophyte alkaloids between different plant structures. This has shown that there is a decreasing gradient of ergovaline concentration from the base to the tip of the tiller. However, many previous studies investigated population averages due to multiple samples from individual plants needing to be pooled to supply sufficient material for quantitative analyses. Similarly, research has been undertaken investigating the difference in expression levels between newly emerged leaves and older more mature plant structures, but again this research required the pooling of samples (Spiering et al., <xref ref-type="bibr" rid="B17">2002</xref>, <xref ref-type="bibr" rid="B18">2005</xref>). It has also been shown (Welty et al., <xref ref-type="bibr" rid="B19">1994</xref>) that there are significant differences in expression between plants within a population with the expression difference a heritable trait (Easton et al., <xref ref-type="bibr" rid="B5">2002</xref>). This factor has been exploited in agricultural systems to select for populations with higher or lower ergovaline expression (Adcock et al., <xref ref-type="bibr" rid="B1">1997</xref>; Pennell et al., <xref ref-type="bibr" rid="B12">2010</xref>).</p>
<p>To date no research has been undertaken on individual tillers looking at variation in expression within a single plant. If such variation exists, then a sampling regime for selecting high or low expressing populations would be critical, as would the sampling protocol for assessing any individual plant expression. The aim of the current research was to investigate the range of ergovaline (and selected ergot alkaloids) expression between individual tillers within a plant, and compare this to the range of expression observed between plants in a given population.</p>
</sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and methods</title>
<sec>
<title>Plant material</title>
<p>Seedlings of perennial ryegrass cv. Samson, infected with a common toxic strain of <italic>Epichlo&#x000EB; festucae</italic> var. <italic>lolii</italic> [formally known as <italic>Neotyphodium lolii</italic> (Leuchtmann et al., <xref ref-type="bibr" rid="B9">2014</xref>)] were raised in a glasshouse and their endophyte status assessed after 4 weeks from sowing seed (Simpson et al., <xref ref-type="bibr" rid="B16">2012</xref>). Endophyte-free plants were discarded and endophyte-positive plants (25 individuals) were transferred to poly-bags (P3/4) with fresh potting mix. Plants were maintained in the glasshouse for approximately 14 months. Plant maintenance included routine watering and application of additional slow release fertilizer as required. Periodic trimming of plants with scissors to 20 mm above ground level to stimulate alkaloid production was conducted with a final trim to ground level conducted in February 2011 (late summer). 10 weeks after the final trim, six tillers were randomly selected from each plant and harvested to ground level, with the basal 40 mm of the tiller frozen, freeze-dried, and weighed. Individual tillers were milled using 2 &#x000D7; 3 mm stainless steel beads (5 m/s, 30 s) in 2 mL plastic vials (FastPrep FP120, Savant Instruments Inc., Farmingdale, NY, USA).</p>
</sec>
<sec>
<title>Sample extraction</title>
<p>Tillers were extracted using a modification of previous methods (Mol et al., <xref ref-type="bibr" rid="B10">2008</xref>; Rasmussen et al., <xref ref-type="bibr" rid="B13">2012</xref>). Briefly; milled tiller samples were extracted with 500&#x003BC;L of 75% methanol (containing ergotamine (0.54&#x003BC;g/mL) as an internal standard) for 1 h in the dark. Samples were centrifuged (5000 g<sup>1</sup>, 5 min) and the supernatant transferred to 2 mL amber HPLC vials via a 0.45 &#x003BC;m syringe filter (PVDF).</p>
</sec>
<sec>
<title>Ergot alkaloid analysis</title>
<p>Samples were analyzed according to Rasmussen et al. (<xref ref-type="bibr" rid="B13">2012</xref>), using a Thermo TSQ triple-quadrupole mass spectrometer equipped with an Accela 1250 HPLC system. Chromatography was achieved using a Kinetex XB-C18 column (100 &#x000D7; 2.1 mm, 2.6&#x003BC;, Phenomenex). The method allows the quantification of chanoclavine (1), agroclavine (2), elymoclavine (3), lysergol (4), lysergic acid (5), ergine (6), lysergyl-alanine (7), ergovaline (8), and epimers thereof. Peak integration was conducted using LCQuan 2.7 (Thermo Fisher Scientific Inc., San Jose, CA, USA) with AgResearch in-house software used to determine alkaloid concentrations from peak areas and calculated standard curves.</p>
</sec>
<sec>
<title>Data and statistical analysis</title>
<p>A weighted average of the individual tiller alkaloid concentrations was used to calculate a plant concentration for the purposes of comparing variation between plants. The formula <inline-formula><mml:math id="M1"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi>p</mml:mi><mml:mi>l</mml:mi><mml:mi>a</mml:mi><mml:mi>n</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle='true'><mml:msubsup><mml:mo>&#x02211;</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mtext>&#x0200A;</mml:mtext><mml:mo>=</mml:mo><mml:mtext>&#x0200A;</mml:mtext><mml:mstyle mathvariant='bold' mathsize='normal'><mml:mn>1</mml:mn></mml:mstyle></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mstyle><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:mstyle displaystyle='true'><mml:msubsup><mml:mo>&#x02211;</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mtext>&#x0200A;</mml:mtext><mml:mo>=</mml:mo><mml:mtext>&#x0200A;</mml:mtext><mml:mstyle mathvariant='bold' mathsize='normal'><mml:mn>1</mml:mn></mml:mstyle></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mstyle></mml:mrow></mml:math></inline-formula> describes the calculation, where <italic>x<sub>i</sub></italic> &#x0003D; concentration of analyte <italic>x</italic> in tiller <italic>i, w<sub>i</sub></italic> &#x0003D; weight of tiller <italic>i</italic>, and <italic>x<sub>plant</sub></italic> &#x0003D; calculated concentration of analyte <italic>x</italic> in the plant.</p>
<p>Investigation of the proportions of variance between plant and within plant was preformed via a fully nested ANOVA of the alkaloid expression from individual tillers. A power analysis for determining the number of tillers that would be required to be harvested per plant was undertaken using a One-Way ANOVA model. Statistical analyses were conducted using Minitab&#x000AE; 16 (Minitab Pty Ltd, Sydney, Australia).</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<sec>
<title>Ergot alkaloid detection and quantitation</title>
<p>Not all alkaloids from the ergot alkaloid biosynthetic pathway were detected above the limit of quantitation; only chanoclavine, ergovaline, ergine, and lysergyl-alanine exceeded the limit of quantification (0.1 mg/kg <italic>in planta</italic>). Therefore, only these ergot alkaloids were used to evaluate intra- and inter-plant variation in alkaloid expression.</p>
</sec>
<sec>
<title>Variation in ergot alkaloid expression</title>
<sec>
<title>Variation between plants</title>
<p>There was a high level of variation in the expression of the detected alkaloids between plants in the population. Chanoclavine showed the least change in expression level (3 fold range between plants) compared to ergine which showed the highest with a greater than 25 fold range in expression. This was reflected in the coefficients of variation, where ergine showed the highest (71.3%) and chanoclavine the lowest (28.4%) (Table <xref ref-type="table" rid="T1">1</xref>).</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p><bold>Summary statistics for the ergot alkaloid expression of the plants in the sample population; mean plant expression (mg/kg), minimum and maximum plant expression (mg/kg), coefficient of variation for plant expression</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left"><bold>Alkaloid</bold></th>
<th align="center"><bold>Chanoclavine</bold></th>
<th align="center"><bold>Ergovaline</bold></th>
<th align="center"><bold>Ergine</bold></th>
<th align="center"><bold>Lysergyl-alanine</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">Mean</td>
<td align="char" char=".">0.38</td>
<td align="char" char=".">5.5</td>
<td align="char" char=".">5.81</td>
<td align="char" char=".">1.2</td>
</tr>
<tr>
<td align="left">Min</td>
<td align="char" char=".">0.18</td>
<td align="char" char=".">0.65</td>
<td align="char" char=".">0.14</td>
<td align="char" char=".">0.47</td>
</tr>
<tr>
<td align="left">Max</td>
<td align="char" char=".">0.56</td>
<td align="char" char=".">13.88</td>
<td align="char" char=".">12.65</td>
<td align="char" char=".">1.98</td>
</tr>
<tr>
<td align="left">CV (%)</td>
<td align="char" char=".">28.4</td>
<td align="char" char=".">53.2</td>
<td align="char" char=".">71.3</td>
<td align="char" char=".">33.4</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec>
<title>Variation within plants</title>
<p>Within the plants (between tillers of the same plant) there were also observations of a high level of variation in alkaloid expression. Coefficients of variation for any plant/alkaloid combination ranged from 8.3% to 90.8%. Table <xref ref-type="table" rid="T2">2</xref> shows the mean concentration and coefficient of variation for each plant/alkaloid combination.</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p><bold>Mean concentrations (mg/kg) (and coefficients of variation) of ergot alkaloids detected in tillers of individual plants of the population</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left"><bold>Plant</bold></th>
<th align="center" colspan="2"><bold>Chanoclavine</bold></th>
<th align="center" colspan="2"><bold>Ergovaline</bold></th>
<th align="center" colspan="2"><bold>Ergine</bold></th>
<th align="center" colspan="2"><bold>Lysergyl-alanine</bold></th>
</tr>
<tr>
<th/>
<th align="center"><bold>Mean</bold></th>
<th align="center"><bold>CV (%)</bold></th>
<th align="center"><bold>Mean</bold></th>
<th align="center"><bold>CV (%)</bold></th>
<th align="center"><bold>Mean</bold></th>
<th align="center"><bold>CV (%)</bold></th>
<th align="center"><bold>Mean</bold></th>
<th align="center"><bold>CV (%)</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">01</td>
<td align="char" char=".">0.43</td>
<td align="char" char=".">17.7</td>
<td align="char" char=".">5.4</td>
<td align="char" char=".">71.9</td>
<td align="char" char=".">7.7</td>
<td align="char" char=".">52.6</td>
<td align="char" char=".">1.4</td>
<td align="char" char=".">65.2</td>
</tr>
<tr>
<td align="left">02</td>
<td align="char" char=".">0.42</td>
<td align="char" char=".">34.8</td>
<td align="char" char=".">8.1</td>
<td align="char" char=".">29.5</td>
<td align="char" char=".">0.1</td>
<td align="char" char=".">155.1</td>
<td align="char" char=".">0.8</td>
<td align="char" char=".">37.4</td>
</tr>
<tr>
<td align="left">03</td>
<td align="char" char=".">0.50</td>
<td align="char" char=".">10.0</td>
<td align="char" char=".">7.6</td>
<td align="char" char=".">14.9</td>
<td align="char" char=".">10.3</td>
<td align="char" char=".">8.3</td>
<td align="char" char=".">1.9</td>
<td align="char" char=".">14.3</td>
</tr>
<tr>
<td align="left">04</td>
<td align="char" char=".">0.37</td>
<td align="char" char=".">22.4</td>
<td align="char" char=".">13.9</td>
<td align="char" char=".">9.8</td>
<td align="char" char=".">1.3</td>
<td align="char" char=".">35.1</td>
<td align="char" char=".">1.0</td>
<td align="char" char=".">21.0</td>
</tr>
<tr>
<td align="left">05</td>
<td align="char" char=".">0.20</td>
<td align="char" char=".">28.8</td>
<td align="char" char=".">2.5</td>
<td align="char" char=".">21.6</td>
<td align="char" char=".">6.2</td>
<td align="char" char=".">12.1</td>
<td align="char" char=".">0.7</td>
<td align="char" char=".">13.6</td>
</tr>
<tr>
<td align="left">06</td>
<td align="char" char=".">0.25</td>
<td align="char" char=".">66.8</td>
<td align="char" char=".">0.6</td>
<td align="char" char=".">90.8</td>
<td align="char" char=".">7.1</td>
<td align="char" char=".">64.6</td>
<td align="char" char=".">1.0</td>
<td align="char" char=".">72.4</td>
</tr>
<tr>
<td align="left">07</td>
<td align="char" char=".">0.49</td>
<td align="char" char=".">34.8</td>
<td align="char" char=".">5.5</td>
<td align="char" char=".">26.3</td>
<td align="char" char=".">9.0</td>
<td align="char" char=".">12.5</td>
<td align="char" char=".">1.6</td>
<td align="char" char=".">17.0</td>
</tr>
<tr>
<td align="left">08</td>
<td align="char" char=".">0.29</td>
<td align="char" char=".">20.9</td>
<td align="char" char=".">6.6</td>
<td align="char" char=".">40.9</td>
<td align="char" char=".">4.2</td>
<td align="char" char=".">22.4</td>
<td align="char" char=".">1.2</td>
<td align="char" char=".">37.8</td>
</tr>
<tr>
<td align="left">09</td>
<td align="char" char=".">0.36</td>
<td align="char" char=".">35.1</td>
<td align="char" char=".">11.2</td>
<td align="char" char=".">30.5</td>
<td align="char" char=".">10.7</td>
<td align="char" char=".">26.7</td>
<td align="char" char=".">1.6</td>
<td align="char" char=".">15.1</td>
</tr>
<tr>
<td align="left">10</td>
<td align="char" char=".">0.27</td>
<td align="char" char=".">58.6</td>
<td align="char" char=".">3.7</td>
<td align="char" char=".">42.2</td>
<td align="char" char=".">2.7</td>
<td align="char" char=".">60.0</td>
<td align="char" char=".">0.7</td>
<td align="char" char=".">50.8</td>
</tr>
<tr>
<td align="left">11</td>
<td align="char" char=".">0.44</td>
<td align="char" char=".">25.5</td>
<td align="char" char=".">5.5</td>
<td align="char" char=".">29.5</td>
<td align="char" char=".">12.6</td>
<td align="char" char=".">14.3</td>
<td align="char" char=".">2.0</td>
<td align="char" char=".">14.5</td>
</tr>
<tr>
<td align="left">12</td>
<td align="char" char=".">0.20</td>
<td align="char" char=".">59.6</td>
<td align="char" char=".">1.7</td>
<td align="char" char=".">26.9</td>
<td align="char" char=".">8.3</td>
<td align="char" char=".">43.1</td>
<td align="char" char=".">1.1</td>
<td align="char" char=".">48.2</td>
</tr>
<tr>
<td align="left">13</td>
<td align="char" char=".">0.28</td>
<td align="char" char=".">19.0</td>
<td align="char" char=".">5.2</td>
<td align="char" char=".">15.6</td>
<td align="char" char=".">10.0</td>
<td align="char" char=".">32.3</td>
<td align="char" char=".">0.8</td>
<td align="char" char=".">32.6</td>
</tr>
<tr>
<td align="left">14</td>
<td align="char" char=".">0.23</td>
<td align="char" char=".">49.2</td>
<td align="char" char=".">4.9</td>
<td align="char" char=".">35.1</td>
<td align="char" char=".">0.5</td>
<td align="char" char=".">55.8</td>
<td align="char" char=".">1.0</td>
<td align="char" char=".">34.1</td>
</tr>
<tr>
<td align="left">15</td>
<td align="char" char=".">0.56</td>
<td align="char" char=".">39.8</td>
<td align="char" char=".">10.2</td>
<td align="char" char=".">30.0</td>
<td align="char" char=".">0.2</td>
<td align="char" char=".">117.0</td>
<td align="char" char=".">1.5</td>
<td align="char" char=".">24.2</td>
</tr>
<tr>
<td align="left">16</td>
<td align="char" char=".">0.50</td>
<td align="char" char=".">48.0</td>
<td align="char" char=".">3.2</td>
<td align="char" char=".">39.3</td>
<td align="char" char=".">6.2</td>
<td align="char" char=".">35.5</td>
<td align="char" char=".">1.2</td>
<td align="char" char=".">45.4</td>
</tr>
<tr>
<td align="left">17</td>
<td align="char" char=".">0.30</td>
<td align="char" char=".">17.3</td>
<td align="char" char=".">5.4</td>
<td align="char" char=".">31.7</td>
<td align="char" char=".">0.2</td>
<td align="char" char=".">121.2</td>
<td align="char" char=".">0.8</td>
<td align="char" char=".">41.6</td>
</tr>
<tr>
<td align="left">18</td>
<td align="char" char=".">0.38</td>
<td align="char" char=".">31.8</td>
<td align="char" char=".">1.9</td>
<td align="char" char=".">53.6</td>
<td align="char" char=".">3.6</td>
<td align="char" char=".">46.1</td>
<td align="char" char=".">0.7</td>
<td align="char" char=".">30.3</td>
</tr>
<tr>
<td align="left">19</td>
<td align="char" char=".">0.18</td>
<td align="char" char=".">38.6</td>
<td align="char" char=".">6.1</td>
<td align="char" char=".">31.9</td>
<td align="center">ND</td>
<td align="center">&#x02013;</td>
<td align="char" char=".">0.5</td>
<td align="char" char=".">46.2</td>
</tr>
<tr>
<td align="left">20</td>
<td align="char" char=".">0.39</td>
<td align="char" char=".">25.9</td>
<td align="char" char=".">4.7</td>
<td align="char" char=".">27.4</td>
<td align="char" char=".">8.2</td>
<td align="char" char=".">11.1</td>
<td align="char" char=".">0.9</td>
<td align="char" char=".">18.3</td>
</tr>
<tr>
<td align="left">21</td>
<td align="char" char=".">0.43</td>
<td align="char" char=".">19.2</td>
<td align="char" char=".">5.2</td>
<td align="char" char=".">22.1</td>
<td align="center">ND</td>
<td align="center">&#x02013;</td>
<td align="char" char=".">1.1</td>
<td align="char" char=".">25.9</td>
</tr>
<tr>
<td align="left">22</td>
<td align="char" char=".">0.34</td>
<td align="char" char=".">26.7</td>
<td align="char" char=".">5.4</td>
<td align="char" char=".">22.4</td>
<td align="char" char=".">9.6</td>
<td align="char" char=".">26.7</td>
<td align="char" char=".">1.6</td>
<td align="char" char=".">29.0</td>
</tr>
<tr>
<td align="left">23</td>
<td align="char" char=".">0.45</td>
<td align="char" char=".">21.6</td>
<td align="char" char=".">4.6</td>
<td align="char" char=".">35.1</td>
<td align="char" char=".">9.1</td>
<td align="char" char=".">17.4</td>
<td align="char" char=".">1.4</td>
<td align="char" char=".">34.5</td>
</tr>
<tr>
<td align="left">24</td>
<td align="char" char=".">0.50</td>
<td align="char" char=".">12.9</td>
<td align="char" char=".">4.2</td>
<td align="char" char=".">33.0</td>
<td align="char" char=".">7.0</td>
<td align="char" char=".">20.6</td>
<td align="char" char=".">1.4</td>
<td align="char" char=".">22.4</td>
</tr>
<tr>
<td align="left">25</td>
<td align="char" char=".">0.43</td>
<td align="char" char=".">37.6</td>
<td align="char" char=".">4.4</td>
<td align="char" char=".">34.5</td>
<td align="char" char=".">5.9</td>
<td align="char" char=".">25.5</td>
<td align="char" char=".">1.5</td>
<td align="char" char=".">51.6</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>ND, Not Detected</italic>.</p>
</table-wrap-foot>
</table-wrap>
<p>To investigate the proportions of variance between plant and within plant, a fully nested ANOVA was undertaken, summarized in Table <xref ref-type="table" rid="T3">3</xref>. For ergovaline and ergine, the main contributor of variance was variation in expression between plants. Chanoclavine showed the opposite pattern, with the main contributor being variation in expression within a plant. Lysergyl-alanine showed a more balanced distribution of variance.</p>
<table-wrap position="float" id="T3">
<label>Table 3</label>
<caption><p><bold>Percentage of variance component attributed to between plant or within plant variation for each ergot alkaloid</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left"><bold>Alkaloid</bold></th>
<th align="center" colspan="2"><bold>Variance attributed to</bold></th>
</tr>
<tr>
<th/>
<th align="left"><bold>Between plant (%)</bold></th>
<th align="left"><bold>Within plant (%)</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">Chanoclavine</td>
<td align="char" char=".">38.7</td>
<td align="char" char=".">61.3</td>
</tr>
<tr>
<td align="left">Ergovaline</td>
<td align="char" char=".">70.9</td>
<td align="char" char=".">29.1</td>
</tr>
<tr>
<td align="left">Ergine</td>
<td align="char" char=".">79.6</td>
<td align="char" char=".">20.4</td>
</tr>
<tr>
<td align="left">Lysergyl-alanine</td>
<td align="char" char=".">43.5</td>
<td align="char" char=".">56.5</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>For chanoclavine, as the concentration increased within a plant, the variance remained relatively constant. The average variance of the lowest five plants was similar to that of the highest five plants. This can be seen in the consistency of the size of the confidence intervals of the means of each plant (Figure <xref ref-type="fig" rid="F2">2</xref>). This compares to ergovaline, where the variance is greater for the higher expressing plants than for the lower expressing plants (Figure <xref ref-type="fig" rid="F3">3</xref>).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p><bold>Box plot of chanoclavine concentration for individual tillers of each plant with mean tiller concentration (open circles) and boxes showing interquartile range</bold>. Plants are ranked from lowest to highest mean tiller concentration. Also shown are the corresponding parameters for the weighted mean of each plant.</p></caption>
<graphic xlink:href="fchem-02-00107-g0002.tif"/>
</fig>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p><bold>Box plot of ergovaline concentration for individual tillers of each plant with mean tiller concentration (open circles) and boxes showing interquartile range</bold>. Plants are ranked from lowest to highest mean tiller concentration. Also shown are the corresponding parameters for the weighted mean of each plant. Outliers are indicated by an asterisk.</p></caption>
<graphic xlink:href="fchem-02-00107-g0003.tif"/>
</fig>
<p>Using the data from the current study, power tables have been generated to determine the number of tillers that would be required to be harvested per plant to be confident in selecting the highest or lowest expressing chanoclavine or ergovaline plants of a population (Tables <xref ref-type="table" rid="T4">4</xref>, <xref ref-type="table" rid="T5">5</xref>, <xref ref-type="table" rid="T6">6</xref>). From these power tables we can determine that it is not possible to select a set of low or high expressing chanoclavine individuals with 12 or fewer tillers, as the population mean is 0.37 ppm, with the lowest (0.18 ppm) and highest (0.56 ppm) expressing plants expressing within 0.2 ppm of the population mean. However, for ergovaline, it is possible to make selections within the population using relatively few tillers. Due to the smaller standard deviation at the lower concentration levels, it is possible that a sample of four tillers per plant will allow selection of a sub-set of plants with a mean 3 ppm lower than the population mean (equivalent to the bottom 20% of plants in the test population). To do the same selection for a sub-set of plants with a mean equivalent to the top 20% of plants in the test population (4.7 ppm greater than the population mean) would require sampling of more tillers (due to the higher standard deviation), but could still be achieved with 12 tillers per plant for a selection of 25 plants.</p>
<table-wrap position="float" id="T4">
<label>Table 4</label>
<caption><p><bold>Power table indicating the number of tillers required to select a population of plants with indicated difference in mean chanoclavine expression (mg/kg) from the population mean</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left"><bold>Number of tillers</bold></th>
<th align="center" colspan="5"><bold>Plants in selection</bold></th>
</tr>
<tr>
<th/>
<th align="left"><bold>5</bold></th>
<th align="left"><bold>10</bold></th>
<th align="left"><bold>15</bold></th>
<th align="left"><bold>20</bold></th>
<th align="left"><bold>25</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">2</td>
<td align="char" char=".">0.82</td>
<td align="char" char=".">0.85</td>
<td align="char" char=".">0.88</td>
<td align="char" char=".">0.91</td>
<td align="char" char=".">0.94</td>
</tr>
<tr>
<td align="left">4</td>
<td align="char" char=".">0.43</td>
<td align="char" char=".">0.48</td>
<td align="char" char=".">0.51</td>
<td align="char" char=".">0.54</td>
<td align="char" char=".">0.56</td>
</tr>
<tr>
<td align="left">6</td>
<td align="char" char=".">0.33</td>
<td align="char" char=".">0.37</td>
<td align="char" char=".">0.40</td>
<td align="char" char=".">0.42</td>
<td align="char" char=".">0.44</td>
</tr>
<tr>
<td align="left">8</td>
<td align="char" char=".">0.28</td>
<td align="char" char=".">0.31</td>
<td align="char" char=".">0.34</td>
<td align="char" char=".">0.36</td>
<td align="char" char=".">0.37</td>
</tr>
<tr>
<td align="left">10</td>
<td align="char" char=".">0.24</td>
<td align="char" char=".">0.28</td>
<td align="char" char=".">0.30</td>
<td align="char" char=".">0.32</td>
<td align="char" char=".">0.33</td>
</tr>
<tr>
<td align="left">12</td>
<td align="char" char=".">0.22</td>
<td align="char" char=".">0.25</td>
<td align="char" char=".">0.27</td>
<td align="char" char=".">0.29</td>
<td align="char" char=".">0.30</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Calculated for a 5% level of significance and a power of 0.8 using the standard deviation of the study population (0.15)</italic>.</p>
</table-wrap-foot>
</table-wrap>
<table-wrap position="float" id="T5">
<label>Table 5</label>
<caption><p><bold>Power table indicating the number of tillers required to select a population of plants with indicated difference in mean ergovaline expression (mg/kg) from the population mean</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left"><bold>Tillers harvested</bold></th>
<th align="center" colspan="5"><bold>Plants in selection</bold></th>
</tr>
<tr>
<th/>
<th align="left"><bold>5</bold></th>
<th align="left"><bold>10</bold></th>
<th align="left"><bold>15</bold></th>
<th align="left"><bold>20</bold></th>
<th align="left"><bold>25</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">2</td>
<td align="char" char=".">4.2</td>
<td align="char" char=".">4.4</td>
<td align="char" char=".">4.5</td>
<td align="char" char=".">4.7</td>
<td align="char" char=".">4.8</td>
</tr>
<tr>
<td align="left">4</td>
<td align="char" char=".">2.2</td>
<td align="char" char=".">2.5</td>
<td align="char" char=".">2.6</td>
<td align="char" char=".">2.8</td>
<td align="char" char=".">2.9</td>
</tr>
<tr>
<td align="left">6</td>
<td align="char" char=".">1.7</td>
<td align="char" char=".">1.9</td>
<td align="char" char=".">2.1</td>
<td align="char" char=".">2.2</td>
<td align="char" char=".">2.3</td>
</tr>
<tr>
<td align="left">8</td>
<td align="char" char=".">1.4</td>
<td align="char" char=".">1.6</td>
<td align="char" char=".">1.7</td>
<td align="char" char=".">1.8</td>
<td align="char" char=".">1.9</td>
</tr>
<tr>
<td align="left">10</td>
<td align="char" char=".">1.3</td>
<td align="char" char=".">1.4</td>
<td align="char" char=".">1.5</td>
<td align="char" char=".">1.6</td>
<td align="char" char=".">1.7</td>
</tr>
<tr>
<td align="left">12</td>
<td align="char" char=".">1.1</td>
<td align="char" char=".">1.3</td>
<td align="char" char=".">1.4</td>
<td align="char" char=".">1.5</td>
<td align="char" char=".">1.5</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Calculated for a 5% level of significance and a power of 0.8 using the standard deviation of plants with the lowest 20% expression within the study population (0.77)</italic>.</p>
</table-wrap-foot>
</table-wrap>
<table-wrap position="float" id="T6">
<label>Table 6</label>
<caption><p><bold>Power table indicating the number of tillers required to select a population of plants with indicated difference in mean ergovaline expression (mg/kg) from the population mean</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left"><bold>Number of tillers</bold></th>
<th align="center" colspan="5"><bold>Plants in selection</bold></th>
</tr>
<tr>
<th/>
<th align="left"><bold>5</bold></th>
<th align="left"><bold>10</bold></th>
<th align="left"><bold>15</bold></th>
<th align="left"><bold>20</bold></th>
<th align="left"><bold>25</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">2</td>
<td align="char" char=".">12.5</td>
<td align="char" char=".">12.8</td>
<td align="char" char=".">13.3</td>
<td align="char" char=".">13.8</td>
<td align="char" char=".">14.2</td>
</tr>
<tr>
<td align="left">4</td>
<td align="char" char=".">6.5</td>
<td align="char" char=".">7.2</td>
<td align="char" char=".">7.8</td>
<td align="char" char=".">8.2</td>
<td align="char" char=".">8.5</td>
</tr>
<tr>
<td align="left">6</td>
<td align="char" char=".">5.0</td>
<td align="char" char=".">5.6</td>
<td align="char" char=".">6.0</td>
<td align="char" char=".">6.4</td>
<td align="char" char=".">6.7</td>
</tr>
<tr>
<td align="left">8</td>
<td align="char" char=".">4.2</td>
<td align="char" char=".">4.8</td>
<td align="char" char=".">5.1</td>
<td align="char" char=".">5.4</td>
<td align="char" char=".">5.7</td>
</tr>
<tr>
<td align="left">10</td>
<td align="char" char=".">3.7</td>
<td align="char" char=".">4.2</td>
<td align="char" char=".">4.5</td>
<td align="char" char=".">4.8</td>
<td align="char" char=".">5.0</td>
</tr>
<tr>
<td align="left">12</td>
<td align="char" char=".">3.3</td>
<td align="char" char=".">3.8</td>
<td align="char" char=".">4.1</td>
<td align="char" char=".">4.3</td>
<td align="char" char=".">4.5</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Calculated for a 5% level of significance and a power of 0.8 using the standard deviation of plants with the highest 20% expression within the study population (2.27)</italic>.</p>
</table-wrap-foot>
</table-wrap>
</sec>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>It has long been understood that there is significant variation in endophyte alkaloid expression between plants in a population (Easton et al., <xref ref-type="bibr" rid="B5">2002</xref>). It is generally accepted that this is driven by the host genetics, and is a heritable response that can be selected for in a plant breeding program. What is not clearly understood is how much variation in endophyte alkaloid expression there is between tillers within a plant. This can have implications to plant breeding (through accuracy of plant selections) and in experimental design when investigating endophyte alkaloid expression, where it is necessary to ensure sufficient sample sizes to generate data that is statistically robust.</p>
<p>The results of this study have shown that it is important to not only have an understanding of the variation in the expression of endophyte alkaloids between plants in a population, but also the variation within the plants of the population. Unless the whole plant is being sampled (which is not always possible depending on the experimental design) the variation within the plants can have an impact of the quality of the data generated and the final conclusions of the study. Hence the variability within plants should be considered as part of the experimental design process.</p>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p></sec>
</sec>
</body>
<back>
<ack>
<p>The authors would like to thank Stuart Card and Siva Ganesh (AgResearch Ltd) for reviewing the manuscript and providing useful discussion.</p>
</ack>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Adcock</surname> <given-names>R. A.</given-names></name> <name><surname>Hill</surname> <given-names>N. S.</given-names></name> <name><surname>Bouton</surname> <given-names>J. H.</given-names></name> <name><surname>Boerma</surname> <given-names>H. R.</given-names></name> <name><surname>Ware</surname> <given-names>G. O.</given-names></name></person-group> (<year>1997</year>). <article-title>Symbiont regulation and reducing ergot alkaloid concentration by breeding endophyte-infected tall fescue</article-title>. <source>J. Chem. Ecol</source>. <volume>23</volume>, <fpage>691</fpage>&#x02013;<lpage>704</lpage>. <pub-id pub-id-type="doi">10.1023/B:JOEC.0000006404.33191.60</pub-id></citation>
</ref>
<ref id="B2">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bouton</surname> <given-names>J. H.</given-names></name> <name><surname>Latch</surname> <given-names>G. C. M.</given-names></name> <name><surname>Hill</surname> <given-names>N. S.</given-names></name> <name><surname>Hoveland</surname> <given-names>C. S.</given-names></name> <name><surname>McCann</surname> <given-names>M. A.</given-names></name> <name><surname>Watson</surname> <given-names>R. H.</given-names></name> <etal/></person-group>. (<year>2002</year>). <article-title>Reinfection of tall fescue cultivars with non-ergot alkaloid&#x02013;producing endophytes</article-title>. <source>Agron. J</source>. <volume>94</volume>, <fpage>567</fpage>&#x02013;<lpage>574</lpage>. <pub-id pub-id-type="doi">10.2134/agronj2002.5670</pub-id><pub-id pub-id-type="pmid">15827262</pub-id></citation>
</ref>
<ref id="B3">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Breen</surname> <given-names>J. P.</given-names></name></person-group> (<year>1994</year>). <article-title>Acremonium endophyte interactions with enhanced plant resistance to insects</article-title>. <source>Annu. Rev. Entomol</source>. <volume>39</volume>, <fpage>401</fpage>&#x02013;<lpage>423</lpage>. <pub-id pub-id-type="doi">10.1146/annurev.en.39.010194.002153</pub-id></citation>
</ref>
<ref id="B4">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bush</surname> <given-names>L. P.</given-names></name> <name><surname>Wilkinson</surname> <given-names>H. H.</given-names></name> <name><surname>Schardl</surname> <given-names>C. L.</given-names></name></person-group> (<year>1997</year>). <article-title>Bioprotective alkaloids of grass-fungal endophyte symbioses</article-title>. <source>Plant Physiol</source>. <volume>114</volume>, <fpage>1</fpage>&#x02013;<lpage>7</lpage>. <pub-id pub-id-type="pmid">12223685</pub-id></citation>
</ref>
<ref id="B5">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Easton</surname> <given-names>H. S.</given-names></name> <name><surname>Latch</surname> <given-names>G. C. M.</given-names></name> <name><surname>Tapper</surname> <given-names>B. A.</given-names></name> <name><surname>Ball</surname> <given-names>O. J. P.</given-names></name></person-group> (<year>2002</year>). <article-title>Ryegrass host genetic control of concentrations of endophyte-derived alkaloids</article-title>. <source>Crop Sci</source>. <volume>42</volume>, <fpage>51</fpage>&#x02013;<lpage>57</lpage>. <pub-id pub-id-type="doi">10.2135/cropsci2002.0051</pub-id><pub-id pub-id-type="pmid">11756253</pub-id></citation>
</ref>
<ref id="B6">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hoveland</surname> <given-names>C. S.</given-names></name></person-group> (<year>1993</year>). <article-title>Importance and economic significance of the Acremonium endophytes to performance of animals and grass plant</article-title>. <source>Agric. Ecosyst. Environ</source>. <volume>44</volume>, <fpage>3</fpage>&#x02013;<lpage>12</lpage>. <pub-id pub-id-type="doi">10.1016/0167-8809(93)90036-O</pub-id></citation>
</ref>
<ref id="B7">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Johnson</surname> <given-names>L.</given-names></name> <name><surname>de Bonth</surname> <given-names>A. M.</given-names></name> <name><surname>Briggs</surname> <given-names>L.</given-names></name> <name><surname>Caradus</surname> <given-names>J.</given-names></name> <name><surname>Finch</surname> <given-names>S.</given-names></name> <name><surname>Fleetwood</surname> <given-names>D.</given-names></name> <etal/></person-group>. (<year>2013</year>). <article-title>The exploitation of epichloae endophytes for agricultural benefit</article-title>. <source>Fungal Divers</source>. <volume>60</volume>, <fpage>171</fpage>&#x02013;<lpage>188</lpage>. <pub-id pub-id-type="doi">10.1007/s13225-013-0239-4</pub-id></citation>
</ref>
<ref id="B8">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kuldau</surname> <given-names>G.</given-names></name> <name><surname>Bacon</surname> <given-names>C.</given-names></name></person-group> (<year>2008</year>). <article-title>Clavicipitaceous endophytes: their ability to enhance resistance of grasses to multiple stresses</article-title>. <source>Biol. Control</source> <volume>46</volume>, <fpage>57</fpage>&#x02013;<lpage>71</lpage>. <pub-id pub-id-type="doi">10.1016/j.biocontrol.2008.01.023</pub-id></citation>
</ref>
<ref id="B9">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Leuchtmann</surname> <given-names>A.</given-names></name> <name><surname>Bacon</surname> <given-names>C. W.</given-names></name> <name><surname>Schardl</surname> <given-names>C. L.</given-names></name> <name><surname>White</surname> <given-names>J. F.</given-names></name> <name><surname>Tadych</surname> <given-names>M.</given-names></name></person-group> (<year>2014</year>). <article-title>Nomenclatural realignment of Neotyphodium species with genus Epichlo&#x000EB;</article-title>. <source>Mycologia</source> <volume>106</volume>, <fpage>202</fpage>&#x02013;<lpage>215</lpage>. <pub-id pub-id-type="doi">10.3852/13-251</pub-id><pub-id pub-id-type="pmid">24459125</pub-id></citation>
</ref>
<ref id="B10">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mol</surname> <given-names>H. G. J.</given-names></name> <name><surname>Plaza-Bola&#x000F1;os</surname> <given-names>P.</given-names></name> <name><surname>Zomer</surname> <given-names>P.</given-names></name> <name><surname>de Rijk</surname> <given-names>T. C.</given-names></name> <name><surname>Stolker</surname> <given-names>A. A. M.</given-names></name> <name><surname>Mulder</surname> <given-names>P. P. J.</given-names></name></person-group> (<year>2008</year>). <article-title>Toward a generic extraction method for simultaneous determination of pesticides, mycotoxins, plant toxins, and veterinary drugs in feed and food matrixes</article-title>. <source>Anal. Chem</source>. <volume>80</volume>, <fpage>9450</fpage>&#x02013;<lpage>9459</lpage>. <pub-id pub-id-type="doi">10.1021/ac801557f</pub-id><pub-id pub-id-type="pmid">19072261</pub-id></citation>
</ref>
<ref id="B11">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Panaccione</surname> <given-names>D. G.</given-names></name> <name><surname>Tapper</surname> <given-names>B. A.</given-names></name> <name><surname>Lane</surname> <given-names>G. A.</given-names></name> <name><surname>Davies</surname> <given-names>E.</given-names></name> <name><surname>Fraser</surname> <given-names>K.</given-names></name></person-group> (<year>2003</year>). <article-title>Biochemical outcome of blocking the ergot alkaloid pathway of a grass endophyte</article-title>. <source>J. Agric. Food Chem</source>. <volume>51</volume>, <fpage>6429</fpage>&#x02013;<lpage>6437</lpage>. <pub-id pub-id-type="doi">10.1021/jf0346859</pub-id><pub-id pub-id-type="pmid">14558758</pub-id></citation>
</ref>
<ref id="B12">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pennell</surname> <given-names>C.</given-names></name> <name><surname>Rolston</surname> <given-names>M.</given-names></name> <name><surname>De Bonth</surname> <given-names>A.</given-names></name> <name><surname>Simpson</surname> <given-names>W.</given-names></name> <name><surname>Hume</surname> <given-names>D.</given-names></name></person-group> (<year>2010</year>). <article-title>Development of a bird-deterrent fungal endophyte in turf tall fescue</article-title>. <source>N. Z. J. Agric. Res</source>. <volume>53</volume>, <fpage>145</fpage>&#x02013;<lpage>150</lpage>. <pub-id pub-id-type="doi">10.1080/00288231003777681</pub-id></citation>
</ref>
<ref id="B13">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rasmussen</surname> <given-names>S.</given-names></name> <name><surname>Lane</surname> <given-names>G. A.</given-names></name> <name><surname>Mace</surname> <given-names>W.</given-names></name> <name><surname>Parsons</surname> <given-names>A. J.</given-names></name> <name><surname>Fraser</surname> <given-names>K.</given-names></name> <name><surname>Xue</surname> <given-names>H.</given-names></name></person-group> (<year>2012</year>). <article-title>The use of genomics and metabolomics methods to quantify fungal endosymbionts and alkaloids in grasses</article-title>. <source>Methods Mol. Biol</source>. <volume>860</volume>, <fpage>213</fpage>&#x02013;<lpage>226</lpage>. <pub-id pub-id-type="doi">10.1007/978-1-61779-594-7_14</pub-id><pub-id pub-id-type="pmid">22351180</pub-id></citation>
</ref>
<ref id="B14">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rogers</surname> <given-names>W. M.</given-names></name> <name><surname>Roberts</surname> <given-names>C. A.</given-names></name> <name><surname>Andrae</surname> <given-names>J. G.</given-names></name> <name><surname>Davis</surname> <given-names>D. K.</given-names></name> <name><surname>Rottinghaus</surname> <given-names>G. E.</given-names></name> <name><surname>Hill</surname> <given-names>N. S.</given-names></name> <etal/></person-group>. (<year>2011</year>). <article-title>Seasonal fluctuation of ergovaline and total ergot alkaloid concentrations in tall fescue regrowth</article-title>. <source>Crop Sci</source>. <volume>51</volume>, <fpage>1291</fpage>&#x02013;<lpage>1296</lpage>. <pub-id pub-id-type="doi">10.2135/cropsci2010.07.0402</pub-id></citation>
</ref>
<ref id="B15">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Schmidt</surname> <given-names>S. P.</given-names></name> <name><surname>Osborn</surname> <given-names>T. G.</given-names></name></person-group> (<year>1993</year>). <article-title>Effects of endophyte-infected tall fescue on animal performance</article-title>. <source>Agric. Ecosyst. Environ</source>. <volume>44</volume>, <fpage>233</fpage>&#x02013;<lpage>262</lpage>. <pub-id pub-id-type="doi">10.1016/0167-8809(93)90049-U</pub-id></citation>
</ref>
<ref id="B16">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Simpson</surname> <given-names>W. R.</given-names></name> <name><surname>Schmid</surname> <given-names>J.</given-names></name> <name><surname>Singh</surname> <given-names>J.</given-names></name> <name><surname>Faville</surname> <given-names>M. J.</given-names></name> <name><surname>Johnson</surname> <given-names>R. D.</given-names></name></person-group> (<year>2012</year>). <article-title>A morphological change in the fungal symbiont <italic>Neotyphodium lolii</italic> induces dwarfing in its host plant <italic>Lolium perenne</italic></article-title>. <source>Fungal Biol</source>. <volume>116</volume>, <fpage>234</fpage>&#x02013;<lpage>240</lpage>. <pub-id pub-id-type="doi">10.1016/j.funbio.2011.11.006</pub-id><pub-id pub-id-type="pmid">22289769</pub-id></citation>
</ref>
<ref id="B17">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Spiering</surname> <given-names>M. J.</given-names></name> <name><surname>Davies</surname> <given-names>E.</given-names></name> <name><surname>Tapper</surname> <given-names>B. A.</given-names></name> <name><surname>Schmid</surname> <given-names>J.</given-names></name> <name><surname>Lane</surname> <given-names>G. A.</given-names></name></person-group> (<year>2002</year>). <article-title>Simplified extraction of ergovaline and peramine for analysis of tissue distribution in endophyte-infected grass tillers</article-title>. <source>J. Agric. Food Chem</source>. <volume>50</volume>, <fpage>5856</fpage>&#x02013;<lpage>5862</lpage>. <pub-id pub-id-type="doi">10.1021/jf025602b</pub-id><pub-id pub-id-type="pmid">12358450</pub-id></citation>
</ref>
<ref id="B18">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Spiering</surname> <given-names>M. J.</given-names></name> <name><surname>Lane</surname> <given-names>G. A.</given-names></name> <name><surname>Christensen</surname> <given-names>M. J.</given-names></name> <name><surname>Schmid</surname> <given-names>J.</given-names></name></person-group> (<year>2005</year>). <article-title>Distribution of the fungal endophyte <italic>Neotyphodium lolii</italic> is not a major determinant of the distribution of fungal alkaloids in <italic>Lolium perenne</italic> plants</article-title>. <source>Phytochemistry</source> <volume>66</volume>, <fpage>195</fpage>&#x02013;<lpage>202</lpage>. <pub-id pub-id-type="doi">10.1016/j.phytochem.2004.11.021</pub-id><pub-id pub-id-type="pmid">15652576</pub-id></citation>
</ref>
<ref id="B19">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Welty</surname> <given-names>R. E.</given-names></name> <name><surname>Craig</surname> <given-names>A. M.</given-names></name> <name><surname>Azevedo</surname> <given-names>M. D.</given-names></name></person-group> (<year>1994</year>). <article-title>Variability of ergovaline in seeds and straw and endophyte infection in seeds among endophyte-infected genotypes of tall fescue</article-title>. <source>Plant Dis</source>. <volume>78</volume>, <fpage>845</fpage>&#x02013;<lpage>849</lpage>. <pub-id pub-id-type="doi">10.1094/PD-78-0845</pub-id></citation>
</ref>
</ref-list>
</back>
</article>
