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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Cell. Neurosci.</journal-id>
<journal-title>Frontiers in Cellular Neuroscience</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Cell. Neurosci.</abbrev-journal-title>
<issn pub-type="epub">1662-5102</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fncel.2016.00230</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Neuroscience</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Altered Expression of Genes Encoding Neurotransmitter Receptors in GnRH Neurons of Proestrous Mice</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Vastagh</surname> <given-names>Csaba</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/357931/overview"/></contrib>
<contrib contrib-type="author">
<name><surname>Rodolosse</surname> <given-names>Annie</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib>
<contrib contrib-type="author">
<name><surname>Solymosi</surname> <given-names>Norbert</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/277487/overview"/></contrib>
<contrib contrib-type="author">
<name><surname>Liposits</surname> <given-names>Zsolt</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/111830/overview"/></contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Laboratory of Endocrine Neurobiology, Institute of Experimental Medicine, Hungarian Academy of Sciences</institution> <country>Budapest, Hungary</country></aff>
<aff id="aff2"><sup>2</sup><institution>Functional Genomics Core, Institute for Research in Biomedicine (IRB Barcelona)</institution> <country>Barcelona, Spain</country></aff>
<aff id="aff3"><sup>3</sup><institution>Department of Animal Hygiene, Herd-Health and Veterinary Ethology, University of Veterinary Medicine</institution> <country>Budapest, Hungary</country></aff>
<aff id="aff4"><sup>4</sup><institution>Department of Neuroscience, Faculty of Information Technology and Bionics, P&#x000E1;zm&#x000E1;ny P&#x000E9;ter Catholic University</institution> <country>Budapest, Hungary</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Hansen Wang, University of Toronto, Canada</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Pamela L. Mellon, University of California, San Diego, USA; Wilson C. J. Chung, Kent State University, USA; Giorgio Roberto Merlo, University of Turin, Italy</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: Csaba Vastagh <email>vastagh.csaba&#x00040;koki.mta.hu</email></p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>07</day>
<month>10</month>
<year>2016</year>
</pub-date>
<pub-date pub-type="collection">
<year>2016</year>
</pub-date>
<volume>10</volume>
<elocation-id>230</elocation-id>
<history>
<date date-type="received">
<day>07</day>
<month>07</month>
<year>2016</year>
</date>
<date date-type="accepted">
<day>22</day>
<month>09</month>
<year>2016</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2016 Vastagh, Rodolosse, Solymosi and Liposits.</copyright-statement>
<copyright-year>2016</copyright-year>
<copyright-holder>Vastagh, Rodolosse, Solymosi and Liposits</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Gonadotropin-releasing hormone (GnRH) neurons play a key role in the central regulation of reproduction. In proestrous female mice, estradiol triggers the pre-ovulatory GnRH surge, however, its impact on the expression of neurotransmitter receptor genes in GnRH neurons has not been explored yet. We hypothesized that proestrus is accompanied by substantial changes in the expression profile of genes coding for neurotransmitter receptors in GnRH neurons. We compared the transcriptome of GnRH neurons obtained from intact, proestrous, and metestrous female GnRH-GFP transgenic mice, respectively. About 1500 individual GnRH neurons were sampled from both groups and their transcriptome was analyzed using microarray hybridization and real-time PCR. In this study, changes in mRNA expression of genes involved in neurotransmitter signaling were investigated. Differential gene expression was most apparent in GABA-ergic (<italic>Gabbr1, Gabra3, Gabrb3, Gabrb2, Gabrg2</italic>), glutamatergic (<italic>Gria1, Gria2, Grin1, Grin3a, Grm1, Slc17a6</italic>), cholinergic (<italic>Chrnb2, Chrm4</italic>) and dopaminergic (<italic>Drd3, Drd4</italic>), adrenergic (<italic>Adra1b, Adra2a, Adra2c</italic>), adenosinergic (<italic>Adora2a, Adora2b</italic>), glycinergic (<italic>Glra</italic>), purinergic (<italic>P2rx7</italic>), and serotonergic (<italic>Htr1b</italic>) receptors. In concert with these events, expression of genes in the signaling pathways downstream to the receptors, i.e., G-proteins (<italic>Gnai1, Gnai2, Gnas</italic>), adenylate-cyclases (<italic>Adcy3, Adcy5</italic>), protein kinase A (<italic>Prkaca, Prkacb</italic>) protein kinase C (<italic>Prkca</italic>) and certain transporters (<italic>Slc1a4, Slc17a6, Slc6a17</italic>) were also changed. The marked differences found in the expression of genes involved in neurotransmitter signaling of GnRH neurons at pro- and metestrous stages of the ovarian cycle indicate the differential contribution of these neurotransmitter systems to the induction of the pre-ovulatory GnRH surge, the known prerequisite of the subsequent hormonal cascade inducing ovulation.</p>
</abstract>
<kwd-group>
<kwd>GnRH neuron</kwd>
<kwd>gene expression</kwd>
<kwd>proestrus</kwd>
<kwd>neurotransmission</kwd>
<kwd>genomics</kwd>
<kwd>microarray analysis</kwd>
<kwd>pathway analysis</kwd>
<kwd>mouse</kwd>
</kwd-group>
<contract-num rid="cn001">K100722</contract-num>
<contract-num rid="cn001">115984</contract-num>
<contract-sponsor id="cn001">Orsz&#x000E1;gos Tudom&#x000E1;nyos Kutat&#x000E1;si Alapprogramok<named-content content-type="fundref-id">10.13039/501100003549</named-content></contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="125"/>
<page-count count="16"/>
<word-count count="11024"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>Gonadotropin-releasing hormone (GnRH) neurons play a fundamental role in the maintenance of reproduction (Knobil and Neill, <xref ref-type="bibr" rid="B69">2006</xref>). GnRH axons project to the median eminence where they release (Merchenthaler et al., <xref ref-type="bibr" rid="B85">1980</xref>) GnRH into the portal circulation to regulate the pituitary-gonadal axis (Carmel et al., <xref ref-type="bibr" rid="B15">1976</xref>). GnRH neurons are controlled by different neuronal networks via specific membrane receptors for neurotransmitters and neuropeptides released from the presynaptic neuronal afferents (Smith and Jennes, <xref ref-type="bibr" rid="B105">2001</xref>; Campbell, <xref ref-type="bibr" rid="B12">2007</xref>) that modulate the synthesis rate and release pattern of GnRH and other co-produced neuromodulators (Finn et al., <xref ref-type="bibr" rid="B35">1998</xref>; Christian and Moenter, <xref ref-type="bibr" rid="B22">2010</xref>). The operation of the hypothalamo-pituitary gonadal (HPG) axis is cyclic including the cellular activity of GnRH neurons (Plant, <xref ref-type="bibr" rid="B95">2015</xref>). Gonadal hormones have a substantial role in the modulation of GnRH neurons and their neuronal afferents (Radovick et al., <xref ref-type="bibr" rid="B96">2012</xref>).</p>
<p>In female rodents, estradiol (E2) exerts biphasic effects on GnRH neurons and the release of the decapeptide (Sarkar and Fink, <xref ref-type="bibr" rid="B102">1980</xref>; Herbison, <xref ref-type="bibr" rid="B45">1998</xref>). It predominantly suppresses the GnRH system via negative feedback effects with the exception of proestrus when the rising level of E2 primes the system for the preovulatory GnRH surge (Sarkar et al., <xref ref-type="bibr" rid="B101">1976</xref>). This process is driven by E2 acting on estrogen receptors (ER&#x003B1;, ER&#x003B2;, GPR30 and STX-sensitive membrane receptors; Chu et al., <xref ref-type="bibr" rid="B23">2009</xref>; Terasawa et al., <xref ref-type="bibr" rid="B113">2009</xref>; Kenealy et al., <xref ref-type="bibr" rid="B65">2011</xref>; Moenter and Chu, <xref ref-type="bibr" rid="B86">2012</xref>). While the afferent systems of GnRH neurons are known to be regulated predominantly by ER&#x003B1; (Wintermantel et al., <xref ref-type="bibr" rid="B121">2006</xref>; Christian et al., <xref ref-type="bibr" rid="B19">2008</xref>; Yeo and Herbison, <xref ref-type="bibr" rid="B124">2014</xref>; Cheong et al., <xref ref-type="bibr" rid="B17">2015</xref>), GnRH neurons express exclusively the beta subtype of the nuclear receptor (Hrabovszky et al., <xref ref-type="bibr" rid="B51">2000</xref>, <xref ref-type="bibr" rid="B52">2001</xref>). The positive E2 feedback, therefore, can target the widespread neuronal regulators of the GnRH system and also the GnRH neurons themselves via direct actions. The neuronal networks mediating the negative and positive feedback effects of E2 to GnRH neurons have been extensively studied by morphological and functional tools (Wintermantel et al., <xref ref-type="bibr" rid="B121">2006</xref>; Christian et al., <xref ref-type="bibr" rid="B19">2008</xref>; Yeo and Herbison, <xref ref-type="bibr" rid="B124">2014</xref>). In the preovulatory GnRH surge period, GnRH neurons undergo activation exemplified by expression of the immediate early gene c-Fos (Lee et al., <xref ref-type="bibr" rid="B74">1990</xref>), increased transcriptional activity (Chiu et al., <xref ref-type="bibr" rid="B18">1988</xref>; Wang et al., <xref ref-type="bibr" rid="B120">1995</xref>), induction of hormone synthesis (Gore and Roberts, <xref ref-type="bibr" rid="B40">1997</xref>; Finn et al., <xref ref-type="bibr" rid="B35">1998</xref>) and altered firing pattern (Christian et al., <xref ref-type="bibr" rid="B20">2005</xref>; Farkas et al., <xref ref-type="bibr" rid="B32">2013</xref>).</p>
<p>The classical neurotransmitter systems of the brain are potent regulators of the GnRH system as reviewed earlier (Smith and Jennes, <xref ref-type="bibr" rid="B105">2001</xref>). Powerful regulatory role has been revealed for gamma-aminobutyric acid (GABA) (Herbison and Moenter, <xref ref-type="bibr" rid="B48">2011</xref>), glutamate (Iremonger et al., <xref ref-type="bibr" rid="B57">2010</xref>) dopamine (DA) (Liu and Herbison, <xref ref-type="bibr" rid="B78">2013</xref>), norepinephrine (NE) (Hosny and Jennes, <xref ref-type="bibr" rid="B50">1998</xref>), serotonin (Bhattarai et al., <xref ref-type="bibr" rid="B4">2014</xref>), acetylcholine (ACh) (Turi et al., <xref ref-type="bibr" rid="B116">2008</xref>), and histamine (H) (Fekete et al., <xref ref-type="bibr" rid="B33">1999</xref>). In concert with the rich communication of GnRH neurons with diverse transmitter systems of the brain, the expression of genes encoding for neurotransmitter receptors (Todman et al., <xref ref-type="bibr" rid="B115">2005</xref>) and ion channels (Bosch et al., <xref ref-type="bibr" rid="B7">2013</xref>; Norberg et al., <xref ref-type="bibr" rid="B89">2013</xref>) in GnRH neurons has also been verified. In the present study, the proestrus-associated changes in the expression of neurotransmitter receptor genes of GnRH neurons have been challenged. To achieve this goal, we carried out microarray- and PCR-based transcriptome analysis of GnRH neurons harvested from regularly cycling GnRH-GFP transgenic mice at proestrus and metestrus stages of the ovarian cycle. The comparative study revealed a differential expression of neurotransmitter receptor genes of GnRH neurons in proestrous mice providing novel data to have a better understanding of the communication and plasticity between GnRH neurons and their afferents under the positive feedback action of estradiol.</p>
</sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and methods</title>
<sec>
<title>Ethics statement</title>
<p>All experiments were performed with permissions from the Animal Welfare Committee of the Institute of Experimental Medicine Hungarian Academy of Sciences (Permission Number: A5769-01) and in accordance with legal requirements of the European Community (Decree86/609/EEC). All animal experimentation described was conducted in accordance with accepted standards of humane animal care and all efforts were made to minimize suffering.</p>
</sec>
<sec>
<title>Animals</title>
<p>Adult, gonadally intact female mice were used from local colonies bred at the Medical Gene Technology Unit of the Institute of Experimental Medicine (IEM). They were housed in light (12:12 light-dark cycle, lights on at 06:00 h)&#x02014;and temperature (22 &#x000B1; 2&#x000B0;C) controlled environment, with free access to standard food and tap water. GnRH-green-fluorescent protein (GnRH-GFP) transgenic mice (Suter et al., <xref ref-type="bibr" rid="B109">2000</xref>) bred on a C57BL/6J genetic background were used. In this animal model, a GnRH promoter segment drives selective GFP expression in the majority of GnRH neurons. The estrous cycle was monitored daily between 9 and 10 a.m. by microscopic evaluation of vaginal cytology (Nelson et al., <xref ref-type="bibr" rid="B87">1982</xref>; Byers et al., <xref ref-type="bibr" rid="B11">2012</xref>; Cora et al., <xref ref-type="bibr" rid="B26">2015</xref>). Proestrous (<italic>n</italic> &#x0003D; 6) and metestrous (<italic>n</italic> &#x0003D; 6) female mice with at least two consecutive, regular estrous cycles were used. In order to avoid the possible circadian effect, animals were sacrificed at the same period of the day, between 16:00 and 18:00 h. Those animals were considered to be in the proestrus stage that fulfilled the following criteria: (1) vaginal smear staining with predominance of nucleated epithelial cells (Byers et al., <xref ref-type="bibr" rid="B11">2012</xref>); (2) LH serum concentrations &#x0003E;5 mg/L (15.11 &#x000B1; 3.4 mg/L); (3) uterus wet weights &#x0003E;0.15 g (0.19 &#x000B1; 0.01 g). Accordingly, the following criteria were applied for the metestrous cycle phase: (1) vaginal smears consisting of the three cell types: leukocytes, cornified and nucleated epithelial cells (Byers et al., <xref ref-type="bibr" rid="B11">2012</xref>); (2) serum LH levels &#x0003C; 0.5 mg/L (0.35 &#x000B1; 0.02 mg/L); (3) uterus wet weights &#x0003C; 0.1 g (0.08 &#x000B1; 0.01 g). Serum LH concentrations and uterus weight data are presented in Supplementary Figure <xref ref-type="supplementary-material" rid="SM1">1</xref>.</p>
</sec>
<sec>
<title>Serum LH measurements</title>
<p>Blood samples were collected from the heart of deeply anesthetized mice immediately before the brain fixation step. The samples were chilled on ice, centrifuged at 1300 g for 3 min at 4&#x000B0;C. Plasma was aspirated then frozen and stored at &#x02212;80&#x000B0;C until further use. Serum LH concentrations were measured with a rodent LH ELISA kit &#x00023;ERK R7010 from Endocrine Technologies Inc. (Newark, CA, USA) according to manufacturers&#x00027; instructions.</p>
</sec>
<sec>
<title>Laser capture microdissection</title>
<p>Brain fixation, preparation of sections for the subsequent laser capture microdissection (LCM) and microarray profiling were performed as reported elsewhere (Khodosevich et al., <xref ref-type="bibr" rid="B66">2007</xref>; Vastagh et al., <xref ref-type="bibr" rid="B117">2015</xref>). Briefly, metestrous (<italic>n</italic> &#x0003D; 6) and proestrous female (<italic>n</italic> &#x0003D; 6) mice were deeply anesthetized and perfused transcardially with 80 ml 0.5% paraformaldehyde followed by 20% sucrose. For microdissection, 7 &#x003BC;m thick coronal brain sections were cut. Sections were mounted on PEN-membrane slides (Zeiss, Jena, Germany), processed further for laser microdissection. Uniform and representative sampling of the entire GnRH neuronal population was performed using LCM performed on a PALM Microbeam system (Carl Zeiss Microimaging Gmbh, Jena, Germany) which was equipped with an epifluorescent setup. About 250 GFP-positive neurons were dissected per animal from 80 to 100 consecutive sections to generate GnRH cell samples from each brain.</p>
</sec>
<sec>
<title>RNA isolation</title>
<p>GnRH cell samples (metestrous: <italic>n</italic> &#x0003D; 6, proestrous: <italic>n</italic> &#x0003D; 6) collected with LCM were incubated in 200 ml lysis buffer at 56&#x000B0;C for 3 h. RNA was isolated from the lysate by proteinase K/acid phenol method (Khodosevich et al., <xref ref-type="bibr" rid="B66">2007</xref>), then precipitated by adding isopropanol (Sigma-Aldrich) and 20 &#x003BC;g glycogen (Thermo Fischer Scientific, Waltham, MA, USA) at &#x02212;20&#x000B0;C for 30 min followed by centrifugation at 14,000 g at 4&#x000B0;C. The pellet was washed in 70% ethanol, air-dried and resuspended in water. The remaining genomic DNA was eliminated by treatment the mixture with 1U of RNase-free DNase-I (Thermo Fischer Scientific). RNA was purified using RNeasy MinElute Cleanup kit (Qiagen, Hilden, Germany). Total RNA was eluted with 14 &#x003BC;l of ribonuclease-free water. For the analysis of RNA integrity, RNA was isolated from the tissue of the medial preoptic area, and measured using RNA Pico Chip on the 2100 Bioanalyzer (Agilent, Santa Clara, CA, US; Supplementary Figure <xref ref-type="supplementary-material" rid="SM1">2A</xref>).</p>
</sec>
<sec>
<title>Whole transcriptome amplification (WTA)</title>
<p>Library preparation and amplification were performed according to the manufacturer&#x00027;s instructions for the WTA2 kit (Sigma-Aldrich). In the first step of the WTA2 protocol, the RNA was reverse transcribed implementing non self-complementary and quasi-random 3&#x02032; and universal 5&#x02032; primers. The newly synthetized single strands were the templates for annealing and extension steps. When the SYBR Green signal reached a plateau, the reaction was stopped. The resultant library contained cDNA fragments with size distribution between 100 and 1000 base pairs (data obtained from Agilent Bioanalyzer using DNA 1000 microfluidic chip; Supplementary Figure <xref ref-type="supplementary-material" rid="SM1">2B</xref>). The amplified double-stranded cDNA was purified and quantified on a Nanodrop ND-1000 spectrophotometer (Thermo Fisher Scientific).</p>
</sec>
<sec>
<title>Mouse genome 430 PM arrays</title>
<p>Eight microgram of cDNA was fragmented by DNase I and biotinylated by terminal transferase obtained from the GeneChip Mapping 250K Nsp Assay Kit (Affymetrix Inc., Santa Clara, CA, USA). Hybridization, washing, staining, and scanning of Affymetrix Mouse Genome 430 PM Strip arrays were performed following the manufacturer&#x00027;s recommendations. The Mouse Genome 430 PM Strip array allows the analysis of 34,325 well-annotated genes using 45,123 distinct probe sets. Scanned images (DAT files) were transformed into intensities (CEL files) using the AGCC software (Affymetrix). RMA analysis was performed by means of the statistical analysis software Partek Genomics Suite (Partek Inc., St. Louis, MO, USA) to obtain probe set level expression estimates.</p>
</sec>
<sec>
<title>Bioinformatics and pathway analysis</title>
<p>All statistical and data mining works were performed in R-environment (R Core Team, <xref ref-type="bibr" rid="B97">2016</xref>) with Bioconductor packages (Huber et al., <xref ref-type="bibr" rid="B56">2015</xref>). Quality assessment of microarrays (<italic>n</italic> &#x0003D; 12) was performed using affyQCReport (Kauffmann et al., <xref ref-type="bibr" rid="B64">2009</xref>). For quality control data regarding RNA integrity, see Supplementary Figure <xref ref-type="supplementary-material" rid="SM1">3</xref>. Raw microarray data were pre-processed for analysis using RMA (Robust Multi-Array Average (Irizarry et al., <xref ref-type="bibr" rid="B58">2003</xref>). Fold change (FC) estimation and difference analysis of gene expression were based on linear models combined with Bayesian methods using limma package (Ritchie et al., <xref ref-type="bibr" rid="B99">2015</xref>). FC was calculated from normalized and log<sub>2</sub> transformed gene expression microarray data for each probe sets. The obtained <italic>p</italic>-values were adjusted by the FDR-based method. The following cut-off criteria were applied on the differentially expressed genes (DEG): |FC| &#x0003E;1.6; and adjusted <italic>p</italic>-value (<italic>p</italic><sub>adj</sub>) &#x0003C; 0.05. The top 10 differentially expressed genes (up- and down-regulated in proestrus, respectively) are shown in Supplementary Table <xref ref-type="supplementary-material" rid="SM1">1</xref>.</p>
<p>For over-representation analysis, the list of DEGs was analyzed using the web-based functional annotation tool DAVID Bioinformatics Resources 6.7 (<ext-link ext-link-type="uri" xlink:href="https://david.ncifcrf.gov">https://david.ncifcrf.gov</ext-link>) at default settings (Huang da et al., <xref ref-type="bibr" rid="B54">2009a</xref>,<xref ref-type="bibr" rid="B55">b</xref>).</p>
<p>For visualization of biological pathways, the data matrix of log<sub>2</sub> transformed and RMA-normalized microarray data were analyzed using a public web server Graphite Web (Sales et al., <xref ref-type="bibr" rid="B100">2013</xref>). Of the available analytical methods, Signaling Pathway Impact Analysis (SPIA) was used. Over the classical probabilistic components, the SPIA also applies statistical systems biology approaches: it takes into consideration (1) the extent of the expression changes of each gene (2) the position of the DEG within a pathway, (3) the topology of the pathway, (4) the type of interaction between the genes to identify significantly impacted pathways where the total net accumulated perturbation in the pathway (tA) can be calculated (Tarca et al., <xref ref-type="bibr" rid="B110">2009</xref>) The level of significance was 0.05 using FDR correction. Interacting genes of the significant neurotransmitter signaling pathways (pGFDR &#x0003C; 0.05) were visualized using Cytoscape (ver. 3.2.1) open source software platform.</p>
</sec>
<sec>
<title>Quantitative real-time PCR studies</title>
<p>For quantitative real-time PCR (qPCR) investigations of LCM-derived GnRH samples (proestrous females <italic>n</italic> &#x0003D; 6, metestrous females <italic>n</italic> &#x0003D; 5) RNA isolation and WTA were performed as described in the previous section. Amplified and column-purified cDNA was used as template for qPCR. Whole transcriptome-amplified cDNA from LCM samples were diluted in 0.1x TE buffer for qPCR investigation. Inventoried TaqMan assays were used to confirm microarray results by qPCR. Each assay consisted of a FAM dye-labeled TaqMan MGB probe and two PCR primers. Thermal cycling conditions of the qPCR were as follows: 2 min at 50&#x000B0;C and 10 min at 95&#x000B0;C, followed by 40 cycles of 15 s at 95&#x000B0;C and 1 min at 60&#x000B0; C using ViiA 7 real-time PCR platform (Thermo Fisher Scientific). Differential expression of genes was calculated by the 2<sup>&#x02212;&#x00394;&#x00394;Ct</sup> method (Livak and Schmittgen, <xref ref-type="bibr" rid="B80">2001</xref>) using GAPDH gene as a reference. Student&#x00027;s <italic>t</italic>-test were used as a statistical method in comparison of gene expression of the two groups (proestrus: <italic>n</italic> &#x0003D; 6; metestrus: <italic>n</italic> &#x0003D; 5).</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<p>In this study, we analyzed characteristic changes in neurotransmitter signaling of GnRH neurons&#x02014;regulation of receptor subunits and downstream elements of the signaling cascades at the level of gene expression&#x02014;by comparison of the neurotransmitter signaling-related elements of the whole transcriptome of GnRH neurons obtained from intact, metestrous and proestrous GnRH-GFP transgenic mice, respectively.</p>
<sec>
<title>Over-representation analysis</title>
<p>The functional annotation tool DAVID Bioinformatics Resources was used to discover the most relevant gene ontology (GO) annotations. GO categories were differentially represented (FDR adjusted <italic>p</italic> &#x0003C; 0.05) as follows: GO:0005874&#x0007E;<italic>microtubule</italic>, GO:0000166&#x0007E;<italic>nucleotide binding</italic>; GO:0016071&#x0007E;<italic>mRNA metabolic process</italic>; GO:0031988&#x0007E;<italic>membrane-bounded vesicle</italic>; GO:0007268&#x0007E;<italic>synaptic transmission</italic>; GO:0044456&#x0007E;<italic>synapse part</italic>.</p>
</sec>
<sec>
<title>Differential expression of genes involved in neurotransmitter signaling</title>
<p>Analysis of microarray data revealed differentially expressed genes associated with various neurotransmitter signaling mechanisms. Receptor subunits of GABAergic, glutamatergic, and cholinergic communication, as well as receptors participating in adrenergic, serotonergic, dopaminergic, glycinergic, adenosinergic, and purinergic neurotransmission exhibited significant changes (FC &#x0003E; 1.6; adjusted <italic>p</italic> &#x0003C; 0.05) in gene expression levels. In addition, genes encoding G-proteins and downstream effectors as well as neurotransmitter/amino acid transporters of the solute carrier family also showed differential expression (Figure <xref ref-type="fig" rid="F1">1</xref> and Table <xref ref-type="table" rid="T1">1</xref>).</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p><bold>Hierarchical clustering of genes and microarray experiments</bold>. Expression levels of the genes involved neurotransmitter signaling (see also Table <xref ref-type="table" rid="T1">1</xref>) are visualized on a heat map. The rows represent differentially expressed probe sets with corresponding gene symbols on the right. The expression level of each probe is color coded: for decoding, see the color key. The individual samples are shown as columns. The six proestrous and metestrous samples are coded in blue and yellow, respectively.</p></caption>
<graphic xlink:href="fncel-10-00230-g0001.tif"/>
</fig>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p><bold>Differentially expressed genes involved in neurotransmitter signaling of GnRH neurons</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="center" colspan="6"><bold>Upregulated genes in proestrus</bold></th>
</tr>
</thead>
<tbody>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left"><bold>Affymetrix ID</bold></td>
<td valign="top" align="center"><bold>AE</bold></td>
<td valign="top" align="left"><bold>Symbol</bold></td>
<td valign="top" align="left"><bold>Description</bold></td>
<td valign="top" align="center"><bold>FC</bold></td>
<td valign="top" align="center"><bold>adj</bold> <italic><bold>p-</bold></italic><bold>value (FDR)</bold></td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>CHOLINERGIC SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1420744_PM_at</td>
<td valign="top" align="center">123.0</td>
<td valign="top" align="left">Chrnb2</td>
<td valign="top" align="left">cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)</td>
<td valign="top" align="center">2.65</td>
<td valign="top" align="center">2.17E-02</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>GABAergic SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1455021_PM_at</td>
<td valign="top" align="center">269.3</td>
<td valign="top" align="left">Gabbr1</td>
<td valign="top" align="left">gamma-aminobutyric acid (GABA) B receptor, 1</td>
<td valign="top" align="center">2.80</td>
<td valign="top" align="center">5.95E-04</td>
</tr>
<tr>
<td valign="top" align="left">1421263_PM_at</td>
<td valign="top" align="center">145.2</td>
<td valign="top" align="left">Gabra3</td>
<td valign="top" align="left">gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3</td>
<td valign="top" align="center">1.90</td>
<td valign="top" align="center">1.77E-02</td>
</tr>
<tr>
<td valign="top" align="left">1428205_PM_x_at</td>
<td valign="top" align="center">30.9</td>
<td valign="top" align="left">Gabrb2</td>
<td valign="top" align="left">gamma-aminobutyric acid (GABA) A receptor, subunit beta 2</td>
<td valign="top" align="center">1.97</td>
<td valign="top" align="center">1.36E-02</td>
</tr>
<tr>
<td valign="top" align="left">1435021_PM_at</td>
<td valign="top" align="center">35.3</td>
<td valign="top" align="left">Gabrb3</td>
<td valign="top" align="left">gamma-aminobutyric acid (GABA) A receptor, subunit beta 3</td>
<td valign="top" align="center">3.05</td>
<td valign="top" align="center">1.53E-02</td>
</tr>
<tr>
<td valign="top" align="left">1418177_PM_at</td>
<td valign="top" align="center">76.6</td>
<td valign="top" align="left">Gabrg2</td>
<td valign="top" align="left">gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2</td>
<td valign="top" align="center">2.20</td>
<td valign="top" align="center">2.96E-02</td>
</tr>
<tr>
<td valign="top" align="left">1416937_PM_at</td>
<td valign="top" align="center">481.4</td>
<td valign="top" align="left">Gabarap</td>
<td valign="top" align="left">gamma-aminobutyric acid receptor associated protein</td>
<td valign="top" align="center">1.82</td>
<td valign="top" align="center">4.36E-03</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>G-PROTEINS AND DOWNSTREAM EFFECTORS</bold></td>
</tr>
<tr>
<td valign="top" align="left">1427510_PM_at</td>
<td valign="top" align="center">241.6</td>
<td valign="top" align="left">Gnai1</td>
<td valign="top" align="left">guanine nucleotide binding protein (G protein), alpha inhibiting 1</td>
<td valign="top" align="center">2.59</td>
<td valign="top" align="center">1.49E-03</td>
</tr>
<tr>
<td valign="top" align="left">1435652_PM_a_at</td>
<td valign="top" align="center">98.2</td>
<td valign="top" align="left">Gnai2</td>
<td valign="top" align="left">guanine nucleotide binding protein (G protein), alpha inhibiting 2</td>
<td valign="top" align="center">1.88</td>
<td valign="top" align="center">4.71E-02</td>
</tr>
<tr>
<td valign="top" align="left">1450186_PM_s_at</td>
<td valign="top" align="center">1687.4</td>
<td valign="top" align="left">Gnas</td>
<td valign="top" align="left">GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus</td>
<td valign="top" align="center">1.73</td>
<td valign="top" align="center">8.27E-04</td>
</tr>
<tr>
<td valign="top" align="left">1455296_PM_at</td>
<td valign="top" align="center">58.0</td>
<td valign="top" align="left">Adcy5</td>
<td valign="top" align="left">adenylate cyclase 5</td>
<td valign="top" align="center">2.70</td>
<td valign="top" align="center">1.84E-02</td>
</tr>
<tr>
<td valign="top" align="left">1450519_PM_a_at</td>
<td valign="top" align="center">109.1</td>
<td valign="top" align="left">Prkaca</td>
<td valign="top" align="left">protein kinase, cAMP dependent, catalytic, alpha</td>
<td valign="top" align="center">2.06</td>
<td valign="top" align="center">5.66E-04</td>
</tr>
<tr>
<td valign="top" align="left">1420611_PM_at</td>
<td valign="top" align="center">496.7</td>
<td valign="top" align="left">Prkacb</td>
<td valign="top" align="left">protein kinase, cAMP dependent, catalytic, beta</td>
<td valign="top" align="center">1.86</td>
<td valign="top" align="center">1.22E-03</td>
</tr>
<tr>
<td valign="top" align="left">1427562_PM_a_at</td>
<td valign="top" align="center">87.5</td>
<td valign="top" align="left">Prkca</td>
<td valign="top" align="left">protein kinase C, alpha</td>
<td valign="top" align="center">1.78</td>
<td valign="top" align="center">7.51E-03</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>GLUTAMATERGIC SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1421970_PM_a_at</td>
<td valign="top" align="center">99.7</td>
<td valign="top" align="left">Gria2</td>
<td valign="top" align="left">glutamate receptor, ionotropic, AMPA2 (alpha 2)</td>
<td valign="top" align="center">3.13</td>
<td valign="top" align="center">1.35E-03</td>
</tr>
<tr>
<td valign="top" align="left">1435239_PM_at</td>
<td valign="top" align="center">30.6</td>
<td valign="top" align="left">Gria1</td>
<td valign="top" align="left">glutamate receptor, ionotropic, AMPA1 (alpha 1)</td>
<td valign="top" align="center">2.36</td>
<td valign="top" align="center">2.84E-02</td>
</tr>
<tr>
<td valign="top" align="left">1437968_PM_at</td>
<td valign="top" align="center">65.0</td>
<td valign="top" align="left">Grin1</td>
<td valign="top" align="left">glutamate receptor, ionotropic, NMDA1 (zeta 1)</td>
<td valign="top" align="center">2.24</td>
<td valign="top" align="center">2.73E-02</td>
</tr>
<tr>
<td valign="top" align="left">1438866_PM_at</td>
<td valign="top" align="center">39.9</td>
<td valign="top" align="left">Grin3a</td>
<td valign="top" align="left">glutamate receptor ionotropic, NMDA3A</td>
<td valign="top" align="center">1.80</td>
<td valign="top" align="center">2.11E-02</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>SOLUTE CARRIER FAMILY</bold></td>
</tr>
<tr>
<td valign="top" align="left">1418610_PM_at</td>
<td valign="top" align="center">173.0</td>
<td valign="top" align="left">Slc17a6</td>
<td valign="top" align="left">solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6</td>
<td valign="top" align="center">1.77</td>
<td valign="top" align="center">1.46E-02</td>
</tr>
<tr>
<td valign="top" align="left">1423549_PM_at</td>
<td valign="top" align="center">74.0</td>
<td valign="top" align="left">Slc1a4</td>
<td valign="top" align="left">solute carrier family 1 (glutamate/neutral amino acid transporter), member 4</td>
<td valign="top" align="center">2.24</td>
<td valign="top" align="center">1.46E-02</td>
</tr>
<tr>
<td valign="top" align="left">1436137_PM_at</td>
<td valign="top" align="center">189.0</td>
<td valign="top" align="left">Slc6a17</td>
<td valign="top" align="left">solute carrier family 6 (neurotransmitter transporter), member 17</td>
<td valign="top" align="center">3.55</td>
<td valign="top" align="center">1.30E-03</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>OTHERS</bold></td>
</tr>
<tr style="border-bottom: thin solid #000000;">
<td valign="top" align="left">1422314_PM_at</td>
<td valign="top" align="center">169.2</td>
<td valign="top" align="left">Clcn6</td>
<td valign="top" align="left">chloride channel 6</td>
<td valign="top" align="center">2.27</td>
<td valign="top" align="center">2.81E-04</td>
</tr>
<tr>
<td valign="top" align="center" colspan="6" style="border-bottom: thin solid #000000;"><bold>Downregulated genes in proestrus</bold></td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>ADENOSINERGIC SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1427519_PM_at</td>
<td valign="top" align="center">21.7</td>
<td valign="top" align="left">Adora2a</td>
<td valign="top" align="left">adenosine A2a receptor</td>
<td valign="top" align="center">0.50</td>
<td valign="top" align="center">7.47E-04</td>
</tr>
<tr>
<td valign="top" align="left">1450214_PM_at</td>
<td valign="top" align="center">13.7</td>
<td valign="top" align="left">Adora2b</td>
<td valign="top" align="left">adenosine A2b receptor</td>
<td valign="top" align="center">0.59</td>
<td valign="top" align="center">7.64E-03</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>ADRENERGIC SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1422183_PM_a_at</td>
<td valign="top" align="center">24.0</td>
<td valign="top" align="left">Adra1b</td>
<td valign="top" align="left">adrenergic receptor, alpha 1b</td>
<td valign="top" align="center">0.49</td>
<td valign="top" align="center">5.18E-04</td>
</tr>
<tr>
<td valign="top" align="left">1423022_PM_at</td>
<td valign="top" align="center">25.0</td>
<td valign="top" align="left">Adra2a</td>
<td valign="top" align="left">adrenergic receptor, alpha 2a</td>
<td valign="top" align="center">0.37</td>
<td valign="top" align="center">5.07E-04</td>
</tr>
<tr>
<td valign="top" align="left">1422335_PM_at</td>
<td valign="top" align="center">50.0</td>
<td valign="top" align="left">Adra2c</td>
<td valign="top" align="left">adrenergic receptor, alpha 2c</td>
<td valign="top" align="center">0.56</td>
<td valign="top" align="center">1.22E-03</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>CHOLINERGIC SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1450575_PM_at</td>
<td valign="top" align="center">15.0</td>
<td valign="top" align="left">Chrm4</td>
<td valign="top" align="left">cholinergic receptor, muscarinic 4</td>
<td valign="top" align="center">0.58</td>
<td valign="top" align="center">1.20E-02</td>
</tr>
<tr>
<td valign="top" align="left">1420560_PM_at</td>
<td valign="top" align="center">30.3</td>
<td valign="top" align="left">Chrne</td>
<td valign="top" align="left">cholinergic receptor, nicotinic, epsilon polypeptide</td>
<td valign="top" align="center">0.52</td>
<td valign="top" align="center">4.98E-03</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>DOPAMINERGIC SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1422278_PM_at</td>
<td valign="top" align="center">16.0</td>
<td valign="top" align="left">Drd3</td>
<td valign="top" align="left">dopamine receptor D3</td>
<td valign="top" align="center">0.60</td>
<td valign="top" align="center">4.99E-02</td>
</tr>
<tr>
<td valign="top" align="left">1422829_PM_at</td>
<td valign="top" align="center">36.7</td>
<td valign="top" align="left">Drd4</td>
<td valign="top" align="left">dopamine receptor D4</td>
<td valign="top" align="center">0.45</td>
<td valign="top" align="center">8.28E-05</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>GABAergic SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1457763_PM_at</td>
<td valign="top" align="center">16.3</td>
<td valign="top" align="left">Gabrd</td>
<td valign="top" align="left">gamma-aminobutyric acid (GABA) A receptor, subunit delta</td>
<td valign="top" align="center">0.58</td>
<td valign="top" align="center">4.98E-03</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>G-PROTEINS AND EFFECTORS</bold></td>
</tr>
<tr>
<td valign="top" align="left">1421959_PM_s_at</td>
<td valign="top" align="center">34.1</td>
<td valign="top" align="left">Adcy3</td>
<td valign="top" align="left">adenylate cyclase 3</td>
<td valign="top" align="center">0.50</td>
<td valign="top" align="center">9.04E-03</td>
</tr>
<tr>
<td valign="top" align="left">1452481_PM_at</td>
<td valign="top" align="center">32.8</td>
<td valign="top" align="left">Plcb2</td>
<td valign="top" align="left">phospholipase C, beta 2</td>
<td valign="top" align="center">0.42</td>
<td valign="top" align="center">3.99E-04</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>GLUTAMATERGIC SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1438827_PM_at</td>
<td valign="top" align="center">118.3</td>
<td valign="top" align="left">Gls</td>
<td valign="top" align="left">Glutaminase</td>
<td valign="top" align="center">0.56</td>
<td valign="top" align="center">4.53E-03</td>
</tr>
<tr>
<td valign="top" align="left">1425700_PM_at</td>
<td valign="top" align="center">57.6</td>
<td valign="top" align="left">Grm1</td>
<td valign="top" align="left">glutamate receptor, metabotropic 1</td>
<td valign="top" align="center">0.53</td>
<td valign="top" align="center">5.78E-03</td>
</tr>
<tr>
<td valign="top" align="left">1421393_PM_at</td>
<td valign="top" align="center">15.1</td>
<td valign="top" align="left">Grin2d</td>
<td valign="top" align="left">glutamate receptor, ionotropic, NMDA2D (epsilon 4)</td>
<td valign="top" align="center">0.37</td>
<td valign="top" align="center">1.49E-04</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>SEROTONERGIC SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1422288_PM_at</td>
<td valign="top" align="center">37.3</td>
<td valign="top" align="left">Htr1b</td>
<td valign="top" align="left">5-hydroxytryptamine (serotonin) receptor 1B</td>
<td valign="top" align="center">0.58</td>
<td valign="top" align="center">1.14E-02</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>PURINERGIC SIGNALING</bold></td>
</tr>
<tr>
<td valign="top" align="left">1422218_PM_at</td>
<td valign="top" align="center">24.0</td>
<td valign="top" align="left">P2rx7</td>
<td valign="top" align="left">purinergic receptor P2X, ligand-gated ion channel, 7</td>
<td valign="top" align="center">0.59</td>
<td valign="top" align="center">2.20E-03</td>
</tr>
<tr style="background-color:#bbbdc0">
<td valign="top" align="left" colspan="6"><bold>OTHERS</bold></td>
</tr>
<tr>
<td valign="top" align="left">1422277_PM_at</td>
<td valign="top" align="center">20.6</td>
<td valign="top" align="left">Glra1</td>
<td valign="top" align="left">glycine receptor, alpha 1 subunit</td>
<td valign="top" align="center">0.49</td>
<td valign="top" align="center">2.76E-03</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>The list of differentially expressed genes (DEGs) with false discovery rate (FDR) value &#x0003C; 0.05 was screened for genes that are involved in neurotransmitter signaling, i.e., receptor subunits, enzymes, G-proteins. DEGs of the major neurotransmitter/neuromodulatory systems are listed here: GABAergic, glutamatergic, dopaminergic, adrenergic, serotonergic, cholinergic, purinergic, and adenosinergic systems. FC values indicate the changes of expression in the proestrous vs. metestrous GnRH neurons. AE, average expression values at probeset level</italic>.</p>
</table-wrap-foot>
</table-wrap>
<p>Significant downregulation was found in gene expression of adenosinergic (<italic>Adora2a, Adora2b</italic>), adrenergic (<italic>Adra1b, Adra2a, Adra2c</italic>) serotonergic (<italic>Htr1b</italic>), purinergic (<italic>P2rx7</italic>), and cholinergic (<italic>Chrm4, Chrne</italic>) receptors or their subunits, respectively, by microarray data analysis. Similarly, the dopaminergic receptor <italic>Drd3</italic> and <italic>Drd4</italic> exhibited lower mRNA level in proestrus. The <italic>Gabbr1</italic> coding for GABA-B receptor 1 and the GABA-A receptor subunit <italic>Gabra3, Gabrb2, Gabrb3, Gabrd, Gabrg2</italic> were upregulated. The gene of the GABA-A receptor associated protein, <italic>Gabarap</italic> were also upregulated. Other GABA-A receptor subunit, the <italic>Gabrd</italic> showed downregulated gene expression. Receptor subunits of the glutamatergic signaling were upregulated (<italic>Grin3a, Gria1, Gria2</italic>, and <italic>Grin1</italic>) whereas <italic>Grin2d</italic>, the metabotropic glutamate receptor <italic>Grm1</italic> and glutaminase (<italic>Gls</italic>) were downregulated. The expression level of the nicotinic cholinergic receptor beta polypeptide 2 (Chrnb2), as well as several heterotrimeric G-protein alpha subunits (<italic>Gnai1, Gnai2, and Gnas</italic>) were increased. Genes of downstream primary effector proteins were expressed at either higher (<italic>Adcy5</italic>) or lower level (<italic>Adcy3, Plcb2</italic>) in proestrus. The secondary effector <italic>Prkaca, Prkacb</italic>, and <italic>Prkca</italic> were upregulated. As far as the solute carrier families are concerned, the glutamate <italic>Slc1a4</italic>, the vesicular glutamate transporter <italic>Slc17a6</italic> and sodium-dependent vesicular transporter <italic>Slc6a17</italic> exhibited higher expression level in GnRH neurons in proestrus. Expression of <italic>Clcn6</italic> and <italic>Glra1</italic> genes, both involved in cellular chloride ion transport, were up- or down-regulated, respectively.</p>
</sec>
<sec>
<title>Validation of the microarray data</title>
<p>TaqMan real-time PCR was used for validation of microarray data (Figure <xref ref-type="fig" rid="F2">2A</xref>). Out of the 9 selected target genes, representing GABA, glutamate and acetylcholine neurotransmission, the differential expression of 8 genes was confirmed (<italic>Slc17a6, Grin1, Gria1, Chrnb2, Gabrb2, Gabbr1, Gabrb3, Gabra3</italic>) and 6 of them exhibited FC &#x0003E;1.5 (<italic>Slc17a6, Grin1, Gria1, Chrnb2, Gabrb2, and Gabbr1</italic>). We found significant differences in gene expression of GABAB1 and Slc17a6 genes by qPCR. Differences between other targets were not significant due to the high standard deviation of individual samples. The correlation coefficient (Pearson&#x00027;s <italic>r</italic> &#x0003D; &#x02212;0.8445) indicates the quantitative interrelation between microarray and real-time PCR data (Figure <xref ref-type="fig" rid="F2">2B</xref>).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p><bold>Validation of differential gene expression data by quantitative real-time PCR. (A)</bold> List of genes (FC &#x0003E; 1.6; FDR &#x0003C; 0.05) selected for validation of their differential expression by qPCR. The qPCR confirmed the differential expression of 8 genes. RQ, relative quantity <bold>(B)</bold> The correlation coefficient (Pearson&#x00027;s <italic>r</italic> &#x0003D; &#x02212;0.8445) indicates the quantitative correlation between the log<sub>2</sub> transformed and normalized spot intensity values of microarray hybridizations and the cycle threshold (Ct) value of the qPCR investigations. X-axis, cycle threshold value; Y-axis, normalized microarray expression values.</p></caption>
<graphic xlink:href="fncel-10-00230-g0002.tif"/>
</fig>
</sec>
<sec>
<title>Pathway analyses</title>
<p>High throughput analysis of microarray data from 6 proestrous and 6 metestrous females by Signaling Pathway Impact Analysis (False Discovery Rate, FDR of DEGs &#x0003C; 0.05) identified 32 KEGG and 34 REACTOME pathways (adjusted pG using FDR, pGFdr &#x0003C; 0.05). Three of the KEGG pathways (<italic>GABAergic, cholinergic, and dopaminergic signaling</italic>) and two of the REACTOME pathways (<italic>Neurotransmitter receptor binding and downstream transmission in the postsynaptic cell; Activation of NMDA receptor upon glutamate binding and postsynaptic events</italic>) were strongly associated with neurotransmitter signaling and/or its postsynaptic events (Table <xref ref-type="table" rid="T2">2</xref>).</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p><bold>Significant pathways involved in neurotransmitter signaling identified by Signaling Pathway Impact Analysis (SPIA)</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left"><bold>Database</bold></th>
<th valign="top" align="left"><bold>Pathway</bold></th>
<th valign="top" align="center"><bold>pSize</bold></th>
<th valign="top" align="center"><bold>NDE</bold></th>
<th valign="top" align="center"><bold>pNDE</bold></th>
<th valign="top" align="center"><bold>tA</bold></th>
<th valign="top" align="center"><bold>pPERT</bold></th>
<th valign="top" align="center"><bold>pG</bold></th>
<th valign="top" align="center"><bold>pGFdr</bold></th>
<th valign="top" align="center"><bold>pGFWER</bold></th>
<th valign="top" align="left"><bold>Status</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">REACTOME</td>
<td valign="top" align="left">Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell</td>
<td valign="top" align="center">109</td>
<td valign="top" align="center">41</td>
<td valign="top" align="center">9.11E-05</td>
<td valign="top" align="center">250.53</td>
<td valign="top" align="center">5.00E-06</td>
<td valign="top" align="center">1.03E-08</td>
<td valign="top" align="center">3.37E-06</td>
<td valign="top" align="center">3.37E-06</td>
<td valign="top" align="left">Activated</td>
</tr>
<tr>
<td valign="top" align="left">REACTOME</td>
<td valign="top" align="left">Activation of NMDA receptor upon glutamate binding and postsynaptic events</td>
<td valign="top" align="center">26</td>
<td valign="top" align="center">10</td>
<td valign="top" align="center">3.72E-02</td>
<td valign="top" align="center">50.73</td>
<td valign="top" align="center">5.00E-06</td>
<td valign="top" align="center">3.07E-06</td>
<td valign="top" align="center">5.05E-04</td>
<td valign="top" align="center">1.01E-03</td>
<td valign="top" align="left">Activated</td>
</tr>
<tr>
<td valign="top" align="left">KEGG</td>
<td valign="top" align="left">GABAergic synapse</td>
<td valign="top" align="center">64</td>
<td valign="top" align="center">25</td>
<td valign="top" align="center">1.08E-03</td>
<td valign="top" align="center">&#x02212;4.55</td>
<td valign="top" align="center">2.20E-02</td>
<td valign="top" align="center">2.76E-04</td>
<td valign="top" align="center">5.10E-03</td>
<td valign="top" align="center">3.26E-02</td>
<td valign="top" align="left">Inhibited</td>
</tr>
<tr>
<td valign="top" align="left">KEGG</td>
<td valign="top" align="left">Dopaminergic synapse</td>
<td valign="top" align="center">116</td>
<td valign="top" align="center">40</td>
<td valign="top" align="center">8.73E-04</td>
<td valign="top" align="center">&#x02212;0.18</td>
<td valign="top" align="center">9.48E-01</td>
<td valign="top" align="center">6.70E-03</td>
<td valign="top" align="center">3.55E-02</td>
<td valign="top" align="center">7.90E-01</td>
<td valign="top" align="left">Inhibited</td>
</tr>
<tr>
<td valign="top" align="left">KEGG</td>
<td valign="top" align="left">Cholinergic synapse</td>
<td valign="top" align="center">91</td>
<td valign="top" align="center">29</td>
<td valign="top" align="center">1.40E-02</td>
<td valign="top" align="center">11.92</td>
<td valign="top" align="center">7.70E-02</td>
<td valign="top" align="center">8.45E-03</td>
<td valign="top" align="center">3.80E-02</td>
<td valign="top" align="center">9.97E-01</td>
<td valign="top" align="left">Activated</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Out of significant pathways (pGFdr &#x0003C; 0.05) the neurotransmission signaling-related pathways are shown in the table. Legend to figure: pSize, the number of genes in the pathway; NDE, number of differentially expressed genes in the pathway; pNDE, hypergeometric probability of observing NDE differentially expressed genes in the pathway by chance; tA, observed value of the perturbation score; pPERT, bootstrap probability associated to tA; pG, combined probability of pNDE and pPERT; pGFDR, adjusted pG using False Discovery Rate correction; pGFWER, adjusted pG using Family Wise Error Rate (Bonferroni); STATUS, Inhibition/Activation according to the negative/positive sign of tA</italic>.</p>
</table-wrap-foot>
</table-wrap>
<sec>
<title>GABAergic signaling</title>
<p>The &#x0201C;GABAergic synapse&#x0201D; KEGG pathway (pGFdr &#x0003D; 5.10E-03) was stated as inhibited (observed value of the perturbation score, tA &#x0003D; &#x02212;4.555) and involved 25 differentially expressed genes (Table <xref ref-type="table" rid="T2">2</xref>). In proestrus, subunits of the GABA-A receptor showed altered gene expression level (up-regulated: <italic>Gabra3, Gabrb1, Gabrb2, Gabrb3, Gabrg2</italic>; down-regulated: <italic>Gabrd</italic>). The GABA-B receptor 1 (<italic>Gabbr1</italic>) and several downstream G-proteins (<italic>Gnai1, Gnai2, Gnb2, Gng2, Gng3, Gnao1</italic>), and cAMP-dependent protein kinase C (<italic>Prkaca, Prkacb</italic>) were up-regulated. The adenylate cyclases involved in the GABA-B signaling were either upregulated (<italic>Adcy2, Adcy5</italic>) or downregulated (<italic>Adcy3, Adcy4</italic>) in proestrus (Figure <xref ref-type="fig" rid="F3">3A</xref> and Supplementary Table <xref ref-type="supplementary-material" rid="SM1">2</xref>).</p>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p><bold>Gene expression changes in neurotransmitter signaling pathways. (A)</bold> GABA-ergic synapse pathway. Signaling Pathway Impact Analysis (SPIA) of the microarray data revealed significant enrichment of differentially expressed genes (DEGs) in the &#x0201C;GABAergic synapse&#x0201D; pathway (Bonferroni <italic>p</italic> &#x0003D; 0.005). Nodes and edges of the graph represent genes and their relations, respectively. Colored nodes indicate DEGs with color proportional to log2 fold change values. White node are genes that are not expressed differentially. <bold>(B)</bold> DEGs of the cholinergic synapse pathway. Gene expression data analysis by SPIA revealed differentially expressed genes that are involved in the &#x0201C;cholinergic signaling&#x0201D; pathway (Bonferroni <italic>p</italic> &#x0003D; 0.038). Interaction of differentially expressed genes are presented here. The complete pathway is shown in Supplementary Figure <xref ref-type="supplementary-material" rid="SM1">4</xref>. <bold>(C)</bold> DEGs of the dopaminergic synapse pathway. Microarray data analysis by SPIA showed that a significant number of the differentially expressed genes was enriched in the dopaminergic signaling pathway (Bonferroni <italic>p</italic> &#x0003D; 0.035). Interaction of differentially expressed genes are presented here; the complete pathway is depicted in Supplementary Figure <xref ref-type="supplementary-material" rid="SM1">5</xref>.</p></caption>
<graphic xlink:href="fncel-10-00230-g0003.tif"/>
</fig>
</sec>
<sec>
<title>Cholinergic signaling</title>
<p>Changes in gene expression levels of the &#x0201C;cholinergic synapse&#x0201D; (pGFdr &#x0003D; 3.80E-02) indicate an activation (tA &#x0003D; 11.92, Table <xref ref-type="table" rid="T2">2</xref>) of this KEGG pathway that involved 29 differentially expressed genes (Figure <xref ref-type="fig" rid="F2">2B</xref>). Nicotinic (<italic>Chrne</italic>) and muscarinic (<italic>Chrm4</italic>) cholinergic receptors were down-regulated in GnRH neurons, with the exception of the nicotinic acetylcholine receptor subunit <italic>Chrnb2</italic> (Table <xref ref-type="table" rid="T1">1</xref>) which was up-regulated at proestrus. Upregulation of genes in the signaling cascade (<italic>Gnai1, Gnai2, Gnb2, Gng2, Gng3, Gnao1, Prkaca</italic>, and <italic>Prkacb</italic>) was observed. The Gna11 and Gnaq subunits that form the Gq alpha complex and activate the phospholipase C beta 2 (<italic>Plcb2)</italic>, were up-regulated, whereas <italic>Plcb2</italic> was down-regulated in proestrus. The expression level of the calcium/calmodulin-dependent protein kinase II alpha, beta and gamma (<italic>Camk2a, Camk2g, and Camk2b</italic>, respectively) and <italic>Fos</italic> were significantly higher in proestrus (Figure <xref ref-type="fig" rid="F3">3B</xref>, Supplementary Figure <xref ref-type="supplementary-material" rid="SM1">4</xref> and Supplementary Table <xref ref-type="supplementary-material" rid="SM1">2</xref>).</p>
</sec>
<sec>
<title>Dopaminergic signaling</title>
<p>Dopaminergic signaling pathway (pGFdr &#x0003D; 3.55E-02) in GnRH neurons was stated as inhibited (tA &#x0003D; &#x02212;0.18) in proestrus revealed by SPIA (Table <xref ref-type="table" rid="T2">2</xref>, Figure <xref ref-type="fig" rid="F3">3C</xref>, and Supplementary Figures <xref ref-type="supplementary-material" rid="SM1">4</xref>, <xref ref-type="supplementary-material" rid="SM1">5</xref>). According to the microarray data, the expression level of the dopaminergic receptor D3 and D4 (<italic>Drd3</italic> and <italic>Drd4</italic>) was significantly decreased as compared to metestrus. Up-regulation of G-proteins (<italic>Gnai1, Gnai2, Gnb2, Gng2, Gng3, and Gnao1</italic>) and protein kinases (<italic>Prkaca</italic> and <italic>Prkacb</italic>) have been already shown at the GABAergic and cholinergic signaling cascades. Adenylate cyclase (<italic>Adcy5</italic>), inhibited by the upstream G-protein complex, was up-regulated, whereas <italic>Plbc2</italic> activated at protein level, was down-regulated. The glutamatergic pathway interferes with the dopaminergic signals: the upregulation of AMPA 1 and 2 (<italic>Gria1, Gria2</italic>) receptors are linked with the upregulation of the Akt/Gsk3 pathway: kinesin family members <italic>Kif5c, Kif5b</italic>, and <italic>Kif5</italic> indirectly, whereas <italic>Akt3</italic>, from the dopaminergic side, directly inhibits <italic>Gsk3a</italic> and <italic>Gsk3b</italic>.</p>
</sec>
<sec>
<title>Neurotransmitter receptor binding and postsynaptic signaling</title>
<p>An activated pathway (tA &#x0003D; 250.53) called &#x0201C;<italic>Neurotransmitter Receptor Binding and Downstream Transmission in the Postsynaptic Cell</italic>&#x0201D; (pGFdr &#x0003D; 3.37E-06) was identified in the proestrous GnRH neurons (Table <xref ref-type="table" rid="T2">2</xref> and Figure <xref ref-type="fig" rid="F4">4</xref>). The majority of the pathway is built up by hierarchically numbered clusters&#x02014;highly interconnected regions&#x02014;as defined by the MCODE Cytoscape plugin. Within the top relevant cluster &#x00023;1 significant enrichment of genes in the &#x0201C;ionotropic glutamate receptor complex&#x0201D; (<italic>Gria1, Dlg4</italic>; GO; FDR &#x0003D; 5.37E-16) and &#x0201C;calmodulin binding&#x0201D; (<italic>Camk2a, Camk2b, Camk2g</italic>; GO; FDR &#x0003D; 2.71E-06) terms were found. Genes of the cluster &#x00023;2 were elements of &#x0201C;NMDA receptor complex&#x0201D; (GO; 6.23E-12), in which <italic>Grin1</italic> and <italic>Rasgrf1</italic> were up-, whereas <italic>Grin2d</italic> was downregulated. In cluster &#x00023;3, which is specific for &#x0201C;acetylcholine-gate channel complex&#x0201D; (GO, FDR &#x0003D; 1.16E-23), acetylcholine receptor subunits (<italic>Chrne, Chrnb3, Chrna6</italic>) were downregulated. Cluster &#x00023;4 is functionally connected with several other sub-networks (glutamatergic, cholinergic, and GABAergic receptors). This cluster is built up by heterotrimeric G-proteins that involves increased mRNA levels of alpha subunit <italic>Gnai1, Gnai2, Gnai3, Gnal</italic>, and adenylate cyclases of which <italic>Adcy3</italic> and <italic>Adcy4</italic> are downregulated, <italic>Adcy5</italic> is upregulated. Cluster &#x00023;5 and &#x00023;6 are parts of the GABA-B and GABA-A receptor complexes, respectively, where <italic>Gabbr1, Gabrb1, Gabrb2</italic>, and <italic>Gabrb3</italic> genes are upregulated.</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p><bold>Overview of gene expression changes in the elements of postsynaptic signaling cascades</bold>. Pathway analysis revealed significant activation of a REACTOME pathway called&#x00027; Neurotransmitter Receptor Binding and Downstream Transmission in the Postsynaptic Cell&#x00027; (Bonferroni, <italic>p</italic> &#x0003D; 3.37E-06). Genes that are involved in the various neurotransmitter systems are hierarchically clustered according to their strength of interconnectivity and perturbance level. Clusters were identified as follows: 1. AMPA receptor complex; 2. NMDA receptor complex; 3. Acetylcholine-gated receptor complex; 4. G-proteins; 5. GABA <bold>(B)</bold> receptor; 6. GABA <bold>(A)</bold> receptor.</p></caption>
<graphic xlink:href="fncel-10-00230-g0004.tif"/>
</fig>
</sec>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>Fast synaptic neurotransmission is mediated by postsynaptic ionotropic receptors (Greengard, <xref ref-type="bibr" rid="B42">2001</xref>). GABA and glutamate, the two main neurotransmitter systems, play a fundamental role in the regulation of GnRH neurons (Nikolarakis et al., <xref ref-type="bibr" rid="B88">1988</xref>; Donoso et al., <xref ref-type="bibr" rid="B31">1992</xref>; Ottem et al., <xref ref-type="bibr" rid="B92">2002</xref>; Iremonger et al., <xref ref-type="bibr" rid="B57">2010</xref>; Herbison and Moenter, <xref ref-type="bibr" rid="B48">2011</xref>) and the control of ovulation (Christian and Moenter, <xref ref-type="bibr" rid="B21">2008</xref>).</p>
<sec>
<title>Gabaergic signaling</title>
<p>In the previous decades, it was shown that hypothalamic GnRH neurons receive functional GABAergic primary afferent inputs (Leranth et al., <xref ref-type="bibr" rid="B75">1985</xref>; Adler and Crowley, <xref ref-type="bibr" rid="B2">1986</xref>; Herbison and Dyer, <xref ref-type="bibr" rid="B47">1991</xref>; Kimura and Jinnai, <xref ref-type="bibr" rid="B67">1994</xref>; Jung et al., <xref ref-type="bibr" rid="B63">1998</xref>; Sim et al., <xref ref-type="bibr" rid="B104">2000</xref>; DeFazio et al., <xref ref-type="bibr" rid="B28">2002</xref>; Temple and Wray, <xref ref-type="bibr" rid="B111">2005</xref>; Zhang et al., <xref ref-type="bibr" rid="B125">2009</xref>). The estrous cycle is characterized by profound changes in GABA transmission to GnRH neurons (Herbison, <xref ref-type="bibr" rid="B44">1997</xref>): prior the LH surge the mRNA level of the GABA synthetizing enzyme GAD67 is significantly reduced (Herbison et al., <xref ref-type="bibr" rid="B46">1992</xref>) which exhibits E2-dependent temporal pattern in the territory of the AVPV (Curran-Rauhut and Petersen, <xref ref-type="bibr" rid="B27">2002</xref>). The release of GABA also falls significantly prior to and during the time of estrogen-induced LH surges (Jarry et al., <xref ref-type="bibr" rid="B59">1992</xref>; Tin-Tin-Win-Shwe et al., <xref ref-type="bibr" rid="B114">2004</xref>). This drop of GABA level before the surge seems essential for the positive feedback (Herbison and Dyer, <xref ref-type="bibr" rid="B47">1991</xref>; Kimura and Jinnai, <xref ref-type="bibr" rid="B67">1994</xref>).</p>
<p>Expression of the &#x003B1;1-3, &#x003B1;5, &#x003B2;1-3, and &#x003B3;2 subunits of the GABA<sub>A</sub> receptor were detected in the GnRH neurons of adult female mice earlier (Sim et al., <xref ref-type="bibr" rid="B104">2000</xref>). We found an increased mRNA expression level of the &#x003B1;1, &#x003B2;1-3, and &#x003B3;2 subunits and in the proestrous female. Although a GnRH neuron-specific &#x003B3;2 knock-out mice exhibited normal fertility (Lee et al., <xref ref-type="bibr" rid="B73">2010</xref>), higher level of this subunit can increase the conductance and sensitivity of the GABA<sub>A</sub> receptors (Brickley et al., <xref ref-type="bibr" rid="B9">1999</xref>). The increased mRNA level of the GABA<sub>B</sub> receptor 1 and that of several GABA<sub>A</sub> subunits might also indicate the upregulation of these receptors in response of the dropping GABA level in proestrus. However, the observed negative value of the perturbation score (tA &#x0003D; &#x02212;4.55) indicates a repressed status of the complete GABAergic synapse pathway in GnRH neurons, probably due to downregulation of genes (effector proteins i.e., <italic>Adcy4, Adcy3, Plcb2</italic>), downstream to the GABA receptors in the signaling pathway. Recent functional data support the view that net GABA effects might be determined by the balance of the excitatory GABA<sub>A</sub> (Herbison and Moenter, <xref ref-type="bibr" rid="B48">2011</xref>) and inhibitory GABA<sub>B</sub> (Zhang et al., <xref ref-type="bibr" rid="B125">2009</xref>; Liu et al., <xref ref-type="bibr" rid="B79">2011</xref>) receptor-mediated tones on GnRH neurons, even <italic>in vivo</italic> (Constantin et al., <xref ref-type="bibr" rid="B25">2013</xref>). We showed higher expression of both type of the GABA receptors and a repressed status of the GABAergic pathway suggesting an increased sensitivity for the ligand and inhibited signaling cascade that might play a role in the facilitation of the GnRH surge.</p>
</sec>
<sec>
<title>Glutamatergic signaling</title>
<p>GnRH neurons express ionotropic AMPA (&#x003B1;-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid) and NMDA (N-methyl-D-aspartate) receptors (Gore et al., <xref ref-type="bibr" rid="B41">1996</xref>; Spergel et al., <xref ref-type="bibr" rid="B107">1999</xref>; Ottem et al., <xref ref-type="bibr" rid="B92">2002</xref>) and their antagonists block the LH surge (L&#x000F3;pez et al., <xref ref-type="bibr" rid="B81">1990</xref>, <xref ref-type="bibr" rid="B82">1992</xref>; Brann and Mahesh, <xref ref-type="bibr" rid="B8">1991</xref>; Ping et al., <xref ref-type="bibr" rid="B93">1997</xref>) indicating a prominent role of glutamate in the positive feedback regulation. At the time of the GnRH/LH surge, the number of contacts that express both glutamate and GABA transporters (Ottem et al., <xref ref-type="bibr" rid="B91">2004</xref>), as well as the level of glutamate increases in the neighborhood of the GnRH cell bodies (Ping et al., <xref ref-type="bibr" rid="B94">1994</xref>; Jarry et al., <xref ref-type="bibr" rid="B60">1995</xref>). The expression of AMPA receptors changes at the level of the somata in steroid-induced LH surge model of young female rats, although, very few (1%) GnRH neurons co-synthetize AMPA receptors and Fos in the morning of proestrus. In contrast, the increase in the number of Gria1/Fos positive (25%) and Gria2/Fos positive (71%) GnRH neurons coincides with the increase and peak of LH (Bailey et al., <xref ref-type="bibr" rid="B3">2006</xref>). In concert with these data, we found that expression of the AMPA1 and AMPA2 receptor subunits (<italic>Gria1</italic> and <italic>Gria2</italic>, respectively) increased by the time of LH surge. Though the percentage of NMDAR1-immunopositive GnRH neurons does not change in the mouse (Adjan et al., <xref ref-type="bibr" rid="B1">2008</xref>), we found that the expression level of NMDA subunits <italic>Grin1</italic> and <italic>Grin3a</italic> increased significantly in proestrus. The higher expression level of these receptor subunits and enrichment of genes in the ionotropic glutamate receptor complex suggest an enhanced glutamate receptor signaling in GnRH neurons during the preovulatory GnRH/LH surge.</p>
</sec>
<sec>
<title>Cholinergic signaling</title>
<p>In the past decades, acetylcholine (ACh) has been shown to exert a stimulatory effect on the release of the GnRH peptide <italic>in vitro</italic> (Fiorindo and Martini, <xref ref-type="bibr" rid="B36">1975</xref>; Richardson et al., <xref ref-type="bibr" rid="B98">1982</xref>). Cholinergic afferents to hypothalamic GnRH neurons have been detected at both light and electron microscopic levels in the rat (Turi et al., <xref ref-type="bibr" rid="B116">2008</xref>). Studies using perifused hypothalamic and immortalized GnRH (GT1-7) neurons indicated that selective activation of the nicotinic ACh receptor stimulated, in contrast, muscarinic receptor-specific activation inhibited GnRH release (Krsmanovic et al., <xref ref-type="bibr" rid="B72">1998</xref>). <italic>In vivo</italic> pharmacological experiments in rats suggested an estrous cycle-dependent stimulation of GnRH release by selective muscarinic antagonists (Koren et al., <xref ref-type="bibr" rid="B70">1992</xref>) induced via the M4 receptor subtype encoded by the <italic>Chrm4</italic> gene. We found a significantly downregulated <italic>Chrm4</italic> expression in proestrus and an upregulated level of <italic>Chrnb2</italic>. The altered regulation of the two subunits and the diverse action of the nicotinic and muscarinic-type ACh receptor activation can promote GnRH release and surge in proestrus.</p>
</sec>
<sec>
<title>Dopaminergic signaling</title>
<p>GnRH neurons receive tyrosine-hydroxylase (TH) positive terminals demonstrated both at light microscopic (Jennes et al., <xref ref-type="bibr" rid="B62">1983</xref>) and ultrastructural levels (Leranth et al., <xref ref-type="bibr" rid="B76">1988</xref>; Chen et al., <xref ref-type="bibr" rid="B16">1989</xref>; Horvath et al., <xref ref-type="bibr" rid="B49">1993</xref>). Dual phenotype kisspeptin-TH positive fibers of AVPV origin apposed to the somata of GnRH neurons can be one of the sources of these dopaminergic inputs (Clarkson and Herbison, <xref ref-type="bibr" rid="B24">2011</xref>). Dopamine inhibited the firing and AVPV-evoked GABA/glutamate postsynaptic currents in &#x0007E;50% of the GnRH neurons <italic>in vitro</italic> mediated by D1 and D2-like receptors in male and female mice (Liu and Herbison, <xref ref-type="bibr" rid="B78">2013</xref>) showing no evidence of an estrous cycle-dependent modulation when diestrous, proestrous, and estrous female mice were compared in the morning period. In the current study, D2-like dopamine receptors encoded by <italic>Drd3</italic> and <italic>Drd4</italic> genes were found to be down-regulated in proestrous GnRH neurons, suggesting that expression of these genes are affected by the estrous cycle. However, further functional studies are needed to clarify if down-regulation in the expression of the D3 and D4 receptor genes can decrease the inhibitory effect of dopamine on the excitability of the GnRH neurons in the late afternoon period of proestrus.</p>
</sec>
<sec>
<title>Adrenergic signaling</title>
<p>Numerous studies have supported the view for a long time that norepinephrine (NE) exerts a stimulatory effect on GnRH release in the presence of E2 in OVX&#x0002B;E replacement models (Gallo and Drouva, <xref ref-type="bibr" rid="B38">1979</xref>; Ferris et al., <xref ref-type="bibr" rid="B34">1984</xref>; Wise, <xref ref-type="bibr" rid="B122">1984</xref>). Later, NE was found to suppress the excitability of the GnRH neurons acting through both alpha 1 and beta adrenergic receptors with reduced rate of responsive GnRH neurons during proestrus, otherwise exerting a similar effect across the estrous cycle (Han and Herbison, <xref ref-type="bibr" rid="B43">2008</xref>). We found that adrenergic receptors <italic>Adra1b, Adra2a</italic>, and <italic>Adra2c</italic> are significantly downregulated in proestrus compared to metestrus. The decreased mRNA expression level of these receptors might indicate an attenuated catecholamine sensitivity of GnRH neurons specifically in the late afternoon period; prior to and during LH surge.</p>
</sec>
<sec>
<title>Serotonergic signaling</title>
<p>Earlier investigations provided evidence that 5-HT neurons project directly to GnRH neurons in rodents (Jennes et al., <xref ref-type="bibr" rid="B61">1982</xref>; Kiss and Hal&#x000E1;sz, <xref ref-type="bibr" rid="B68">1985</xref>; Wada et al., <xref ref-type="bibr" rid="B119">2006</xref>; Campbell and Herbison, <xref ref-type="bibr" rid="B13">2007</xref>) In the mouse, serotonin (5-HT) exerts a biphasic effect on the excitability of GnRH neurons: both inhibitory and excitatory responses have been demonstrated, mediated by activation of 5-HT1A and 5-HT2A receptors, respectively (Bhattarai et al., <xref ref-type="bibr" rid="B4">2014</xref>). The serotonergic input to GnRH neurons showed an estrous cycle-dependent regulation in the adult female mouse: during proestrus, the serotonergic inhibition was reduced, accompanied by the absence of the biphasic responses. The 5-HT1B receptor also mediates inhibitory neurotransmission (Mathur et al., <xref ref-type="bibr" rid="B84">2011</xref>; Huang et al., <xref ref-type="bibr" rid="B53">2013</xref>) in the CNS. Although the function of the 5-HT1B receptor was not investigated in GnRH neurons to date, we found that it was down-regulated in proestrous GnRH neurons. Compared to other stages of the estrous cycle, 5-HT1 receptor expression is decreased up to 40% in the basal forebrain during proestrus (Biegon et al., <xref ref-type="bibr" rid="B5">1980</xref>) when peaking level of E2 significantly down-regulates 5-HT receptors (Biegon and McEwen, <xref ref-type="bibr" rid="B6">1982</xref>). The current study further supports that a suppression of the inhibitory 5-HT tone takes place in GnRH neurons in proestrus.</p>
</sec>
<sec>
<title>Purinergic signaling</title>
<sec>
<title>P2X receptors</title>
<p>P2X receptors are trimeric, ligand-gated cation channels activated upon binding of extracellular ATP. They are highly permeable to Ca<sup>2&#x0002B;</sup> and expressed in diverse organs including the brain (Soto et al., <xref ref-type="bibr" rid="B106">1996</xref>; Burnstock, <xref ref-type="bibr" rid="B10">2013</xref>). Purinergic signaling plays a fundamental role in the regulation of hypothalamo-pituitary functions (Stojilkovic, <xref ref-type="bibr" rid="B108">2009</xref>). Expression of P2X2 and P2X4 has been confirmed in GnRH neurons in olfactory placode cultures (Terasawa et al., <xref ref-type="bibr" rid="B112">2005</xref>) where application of ATP helps to synchronize [Ca<sup>2&#x0002B;</sup>]<sub>i</sub> oscillations. Furthermore, P2X5 and P2X6 receptors are also expressed in GnRH neurons of mice as revealed by double-labeling immunofluorescence (Fu et al., <xref ref-type="bibr" rid="B37">2009</xref>). Interestingly, though the presence of P2X7 receptor has not been confirmed in GnRH neurons to date, the mRNA level of <italic>P2xr7</italic> is significantly down-regulated in proestrous GnRH neurons. A possible explanation of this phenomenon may be the E2-dependent regulation of P2X7R expression during the estrous cycle. Data from literature indicate that treatment with E2 decreases the expression of P2X7 receptor both <italic>in vitro</italic> (Cario-Toumaniantz et al., <xref ref-type="bibr" rid="B14">1998</xref>) and <italic>in vivo</italic> (Xu et al., <xref ref-type="bibr" rid="B123">2016</xref>).</p>
</sec>
<sec>
<title>P1 receptors</title>
<p>The adenosine receptor 2A and 2B receptors are members of the G protein-coupled receptor (GPCR) family. The A2 adenosine receptors are coupled to G<sub>s</sub> and G<sub>olf</sub> family of G proteins stimulating adenylate cyclase activity to increase the intracellular cAMP level (Schwindinger et al., <xref ref-type="bibr" rid="B103">2010</xref>). Expression of <italic>Adora2b</italic> has been shown in hypothalamic GnRH neurons (Todman et al., <xref ref-type="bibr" rid="B115">2005</xref>). In this study we found significant down-regulation of the <italic>Adora2a</italic> and <italic>Adora2b</italic> transcripts in proestrous GnRH neurons. The role and significance of the regulation of adenosine receptor 2 are unknown at present, they may be linked to the maintenance of intracellular cAMP levels along the estrous cycle.</p>
</sec>
</sec>
<sec>
<title>Methodological considerations</title>
<sec>
<title>Sampling by LCM</title>
<p>LCM is among the best approaches available for cell-type-specific microarray gene expression profiling (Lin et al., <xref ref-type="bibr" rid="B77">2007</xref>; Okaty et al., <xref ref-type="bibr" rid="B90">2011</xref>; Demarest et al., <xref ref-type="bibr" rid="B29">2012</xref>). This methodology helps to preserve the integrity of the GnRH transcriptome and ensures the systematic sampling of the hypothalamic GnRH neurons. Our strategy aimed to minimize the extent of contamination from surrounding cells was as follows: (1) brain sections were cut at 7 &#x003BC;m thickness; (2) during microdissection, the cutting laser were directed strictly along the perikaryon of the GnRH-GFP neurons. While it is not possible to eliminate contamination during sample preparation completely, careful implementation of the steps above results in highly enriched mRNAs isolated from GnRH neurons.</p>
</sec>
<sec>
<title>Linearity of the RNA amplification</title>
<p>In this work we implemented a relatively new approach for gene expression profiling validated and published earlier (Gonzalez-Roca et al., <xref ref-type="bibr" rid="B39">2010</xref>) showing that &#x0201C;pico profiling&#x0201D; allows an accurate measure of transcript levels from populations as low as 10 cells with insignificant number of false positive or negative hits, using a commercially available TransPlex WTA2 kit from Sigma-Aldrich. Importantly, at the reverse transcription step the quasi-random 3&#x02032; and universal 5&#x02032; primers resulted in DNA fragments flanked by universal end sequences to ensure the linear amplification of the expressed genes without 3&#x02032; and 5&#x02032; bias.</p>
</sec>
<sec>
<title>Validation of the data</title>
<p>High throughput gene expression analysis of GnRH neurons across the estrous cycle was performed for the first time in the present study. A previous study has addressed ion channel expression and E2 regulations in GnRH neurons during negative and positive feedback (Bosch et al., <xref ref-type="bibr" rid="B7">2013</xref>). They showed that E2 treatment up-regulates voltage-gated calcium channel (VGCC) Cav1.3, Cav2.2, and Cav2.3 mRNAs in GnRH neurons. In consistence with their results regarding the expressional changes in the positive feedback period, we have also found a significant increase in the expression of the Cav 2.2, the voltage-dependent N-type calcium channel alpha 1B subunit encoded by Cacna1b gene (FC 1.7; <italic>p</italic><sub>adj</sub> &#x0003C; 0.01) in proestrus whereas the increase in mRNA expression the Cav1.3 [Cacna1d] and Cav2.3 [Cacna1e] subunits was not significant. This discrepancy may be due to the different experimental paradigm: Bosch et al. used <italic>ex-vivo</italic> sorted GnRH neurons from OVX mice primed with E2 dose followed by a surge-inducing E2 dose, whereas in the current study naturally cycling intact mice were used.</p>
</sec>
<sec>
<title>Correlation of mRNA and protein abundances</title>
<p>In this study, differential expression of genes was investigated as alterations in the mRNA abundances. In general, changes of the protein levels should not be well correlated with that of the mRNA levels due to many factors that influence the expression of proteins (ribosomal density, protein half-life, etc.) and the experimental error and noise (Maier et al., <xref ref-type="bibr" rid="B83">2009</xref>; Vogel and Marcotte, <xref ref-type="bibr" rid="B118">2012</xref>). Genome-wide correlations between mRNA and protein expression levels are usually weak (de Sousa Abreu et al., <xref ref-type="bibr" rid="B30">2009</xref>). However, the level of mRNAs expressed differentially significantly correlate better with their proteins compared to genes that are not expressed differentially (Koussounadis et al., <xref ref-type="bibr" rid="B71">2015</xref>) further increasing the confidence of studies applying differential mRNA expression measurements.</p>
</sec>
</sec>
</sec>
<sec sec-type="conclusions" id="s5">
<title>Conclusion</title>
<p>We found considerable differences in the expression of genes encoding neurotransmitter receptors and their effectors in downstream signaling cascades by comparison of GnRH neurons obtained from pro- and metestrous mice, respectively. Signaling systems known to facilitate the GnRH surge (glutamatergic, GABA-A receptor-mediated inputs and cholinergic neurotransmission via nicotinic receptors) become activated, while neuronal inputs that exert inhibitory effects on GnRH release (dopaminergic, serotonergic, adrenergic systems) seem to be negatively regulated at the level of transcripts in proestrus. These complex changes in the gene expression of proestrous GnRH neurons may alter diverse intracellular mechanisms that culminate in the preovulatory GnRH surge.</p>
</sec>
<sec id="s6">
<title>Author contributions</title>
<p>CV designed and performed the experiments, analyzed the data and wrote the manuscript. AR executed hybridization and scanning of microarrays. NS carried out the bioinformatical analysis of the microarray data. ZL designed and supervised the project, and wrote the manuscript.</p>
</sec>
<sec>
<title>Funding</title>
<p>This work was supported by the Hungarian Scientific Research Fund (OTKA K100722, OTKA 115984).</p>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</sec>
</body>
<back>
<ack><p>Authors wish to express their thanks to Dr. Suzanne M. Moenter (Department of Molecular and Integrative Physiology, University of Michigan) for the transgenic mice used in this study; to Dr. Csaba Fekete (Lend&#x000FC;let Laboratory of Integrative Neurobiology, IEM-HAS) for personal communication and advices in LCM methodology.</p>
</ack>
<sec sec-type="supplementary-material" id="s7">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="http://journal.frontiersin.org/article/10.3389/fncel.2016.00230">http://journal.frontiersin.org/article/10.3389/fncel.2016.00230</ext-link></p>
<supplementary-material xlink:href="DataSheet1.docx" id="SM1" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document" xmlns:xlink="http://www.w3.org/1999/xlink"/>
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