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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Cell. Infect. Microbiol.</journal-id>
<journal-title>Frontiers in Cellular and Infection Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Cell. Infect. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">2235-2988</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fcimb.2021.757718</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Cellular and Infection Microbiology</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>
<italic>Roseburia intestinalis</italic>: A Beneficial Gut Organism From the Discoveries in Genus and Species</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Nie</surname>
<given-names>Kai</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/939431"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ma</surname>
<given-names>Kejia</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1557616"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Luo</surname>
<given-names>Weiwei</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shen</surname>
<given-names>Zhaohua</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/435341"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Yang</surname>
<given-names>Zhenyu</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1557315"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Xiao</surname>
<given-names>Mengwei</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Tong</surname>
<given-names>Ting</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1557551"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Yang</surname>
<given-names>Yuanyuan</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1557493"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Wang</surname>
<given-names>Xiaoyan</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1557538"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Gastroenterology, The Third Xiangya Hospital, Central South University</institution>, <addr-line>Changsha</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Hunan Key Laboratory of Nonresolving Inflammation and Cancer, Cancer Research Institute, Central South University</institution>, <addr-line>Changsha</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Yanling Wei, Army Medical University, China</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Shiming Yang, Xinqiao Hospital, China; Zhenming Xu, The University of Texas Health Science Center at San Antonio, United States</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Xiaoyan Wang, <email xlink:href="mailto:wxy220011@163.com">wxy220011@163.com</email>
</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Bacteria and Host, a section of the journal Frontiers in Cellular and Infection Microbiology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>22</day>
<month>11</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>11</volume>
<elocation-id>757718</elocation-id>
<history>
<date date-type="received">
<day>12</day>
<month>08</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>29</day>
<month>10</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Nie, Ma, Luo, Shen, Yang, Xiao, Tong, Yang and Wang</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Nie, Ma, Luo, Shen, Yang, Xiao, Tong, Yang and Wang</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>
<italic>Roseburia intestinalis</italic> is an anaerobic, Gram-positive, slightly curved rod-shaped flagellated bacterium that produces butyrate in the colon. <italic>R. intestinalis</italic> has been shown to prevent intestinal inflammation and maintain energy homeostasis by producing metabolites. Evidence shows that this bacterium contributes to various diseases, such as inflammatory bowel disease, type 2 diabetes mellitus, antiphospholipid syndrome, and atherosclerosis. This review reveals the potential therapeutic role of <italic>R. intestinalis</italic> in human diseases. Patients with inflammatory bowel disease exhibit significant changes in <italic>R. intestinalis</italic> abundance, and they may benefit a lot from modulations targeting <italic>R. intestinalis</italic>. The data reviewed here demonstrate that <italic>R. intestinalis</italic> plays its role in regulating barrier homeostasis, immune cells, and cytokine release through its metabolite butyrate, flagellin and other. Recent advancements in the application of primary culture technology, culture omics, single-cell sequencing, and metabonomics technology have improved research on <italic>Roseburia</italic> and revealed the benefits of this bacterium in human health and disease treatment.</p>
</abstract>
<kwd-group>
<kwd>
<italic>Roseburia</italic>
</kwd>
<kwd>
<italic>Roseburia intestinalis</italic>
</kwd>
<kwd>probiotic</kwd>
<kwd>inflammatory bowel disease (IBD)</kwd>
<kwd>microbiome</kwd>
</kwd-group>    <contract-num rid="cn001">81970494, 81800500</contract-num>    <contract-sponsor id="cn001">National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100001809</named-content>
</contract-sponsor>
<counts>
<fig-count count="3"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="108"/>
<page-count count="15"/>
<word-count count="8904"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>
<italic>Roseburia</italic> spp. have been brought to the fore because of their novel role in modulating the gut microbial ecology, immune responses, and the development of human disorders (<xref ref-type="bibr" rid="B108">Tamanai-Shacoori et&#xa0;al., 2017</xref>). <italic>Roseburia</italic> was named in honor of Theodor Rosebury, an American microbiologist, for his groundbreaking contributions to the field of oral microbiome. <italic>Roseburia</italic> sp. belongs to the phylum Firmicutes, class Clostridia, order Clostridiales, and family Lachnospiraceae (<xref ref-type="bibr" rid="B85">Stackebrandt, 2014</xref>). The <italic>Roseburia</italic> genus has five well-characterized species (<italic>Roseburia intestinalis</italic>, <italic>Roseburia hominis</italic>, <italic>Roseburia inulinivorans</italic>, <italic>Roseburia faecis</italic>, and <italic>Roseburia cecicola</italic>), all of which produce short-chain fatty acids (SCFAs), such as acetate, propionate, and butyrate (<xref ref-type="bibr" rid="B108">Tamanai-Shacoori et&#xa0;al., 2017</xref>). In 2002, Duncan et&#xa0;al. isolated a strain of anaerobic, Gram-positive, slightly curved rod-shaped, and flagellated bacteria from human fecal samples. Subsequent phylogenetic analysis revealed its intimate similarity with <italic>R. cecicola</italic> and the members of cluster XIVa of <italic>Clostridium subphylum</italic>; thus, it was named <italic>Roseburia intestinalis</italic> (<xref ref-type="bibr" rid="B17">Duncan et&#xa0;al., 2002</xref>). Among the top 20 most abundant bacteria in the gut microbiome, the <italic>R. intestinalis</italic> cluster usually accounts for 0.9%&#x2013;5.0% (mean = 2.3%) of the total microbiota (<xref ref-type="bibr" rid="B29">Hold et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B26">Hiippala et&#xa0;al., 2018</xref>).</p>
<p>
<italic>R. intestinalis</italic> are obligate anaerobes that are difficult to culture. They were firstly isolated from human feces in an M2 medium-based culture system (<xref ref-type="bibr" rid="B54">Louis et&#xa0;al., 2004</xref>). It was reported that <italic>R. intestinalis</italic> XB6B4 can be cultivated under anaerobic conditions at 37&#xb0;C in a complex medium containing clarified rumen fluid (described in <xref ref-type="bibr" rid="B9">Chassard et&#xa0;al., 2007</xref>) and 0%&#x2013;5% complex substrates (oat spelt xylan, wheat or corn bran, pea fiber, cabbage, and leek) or 0%&#x2013;3% sugar (xylose or glucose) (<xref ref-type="bibr" rid="B9">Chassard et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B63">Mirande et&#xa0;al., 2010</xref>). <italic>R. intestinalis</italic> DSM 14610 was reported to degrade and utilize oligofructose as the sole energy source, but only when acetate was added to a special medium for colon bacteria (<xref ref-type="bibr" rid="B19">Falony et&#xa0;al., 2006</xref>). This bacterium can also grow anaerobically at 37&#xb0;C in lytic/10 anaerobic/F medium or LYBHI medium supplemented with yeast extract, cellobiose, maltose, and cysteine (<xref ref-type="bibr" rid="B105">Zhu, C. et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B12">Cornuault et&#xa0;al., 2020</xref>). Butyryl-CoA:acetate CoA transferase is the key enzyme that produces butyrate in butyrate-producing bacteria. This enzyme has been detected in <italic>R. intestinalis</italic>, which endows it with the ability to utilize acetate in order to produce butyrate (<xref ref-type="bibr" rid="B82">Pryde et al., 2002</xref>). Previous studies have found that <italic>R. intestinalis</italic> and <italic>Faecalibacterium prausnitzii</italic> are the most abundant butyrate-producing bacteria in human feces (<xref ref-type="bibr" rid="B29">Hold et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B18">Duncan et&#xa0;al., 2004</xref>). <italic>R. intestinalis</italic> can ferment fibers to produce butyrate in an M2 medium supplemented with wheat starch (<xref ref-type="bibr" rid="B54">Louis et&#xa0;al., 2004</xref>). Of note is that butyrate has been reported to exert pervasive anti-inflammatory and metabolic modulation effects in different disease models (<xref ref-type="bibr" rid="B7">Canfora et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B60">McNabney and Henagan, 2017</xref>). Therefore, <italic>R. intestinalis</italic> can be applied as a potential probiotic given its ability to produce butyrate. Enteric bacteria use fibers as a source of carbon to produce butyrate. Martinez et&#xa0;al. reported that a whole-grain diet increases the intestinal abundance of <italic>R. intestinalis</italic> and improves the concentration of interleukin-6 (IL-6, which is linked to metabolic dysfunctions) (<xref ref-type="bibr" rid="B57">Martinez et&#xa0;al., 2013</xref>). <italic>R. intestinalis</italic> also has the ability to ferment xylan and &#x3b2;-mannan, which are common fiber ingredients in the diet (<xref ref-type="bibr" rid="B63">Mirande et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B48">Leth et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B45">La Rosa et&#xa0;al., 2019</xref>). &#x3b2;-mannans and xylans are important components of the plant cell wall, and they are acetylated to protect them from degradation by glycoside hydrolases. &#x3b2;-mannans are widely present in human and animal diets. RiCE2 and RiCE17, two carbohydrate esterases from <italic>R.&#xa0;intestinalis</italic>, remove acetylations from all positions in complex &#x3b2;-mannans in a complementary manner (<xref ref-type="bibr" rid="B61">Michalak et&#xa0;al., 2020</xref>). The&#xa0;growth of <italic>R. intestinalis</italic> is influenced by the carbon source, symbiont, and anoxia, and also by the pH. It has been discovered that iron can modulate the ability of <italic>R. intestinalis</italic> to produce butyrate through the pyruvate mechanism: ferredoxin oxidoreductase (PFO) can convert pyruvate to acetyl-CoA (<xref ref-type="bibr" rid="B16">Dostal et&#xa0;al., 2015</xref>). In addition, PFO is sensitive to reducing ferredoxin (<xref ref-type="bibr" rid="B16">Dostal et&#xa0;al., 2015</xref>). These data show that <italic>R. intestinalis</italic> uses different carbohydrates as the source of energy and that its growth is susceptible to iron. The human regenerating family member 3 alpha (hREG3&#x3b1;) promotes the growth of <italic>R. intestinalis</italic> by inhibiting reactive oxygen species (ROS) signaling and induces resistance in mice with dextran sulfate sodium (DSS)-induced colitis (<xref ref-type="bibr" rid="B13">Darnaud et&#xa0;al., 2018</xref>). Colonic bacteria compete for the colonic ecological niche through nutrition plunder and preempt niche advantage (<xref ref-type="bibr" rid="B47">Leth et&#xa0;al., 2020</xref>). Several external factors, such as diet or antibiotic use, and endogenous factors may affect the ecological niche of <italic>R. intestinalis</italic>. It has been reported that ultravirulent phage mutants can drive the disruption of <italic>R. intestinalis</italic> and the ecological niche occupied by other resistant bacteria (<xref ref-type="bibr" rid="B12">Cornuault et&#xa0;al., 2020</xref>). This phenomenon reveals that the interactions among bacteria in the gut environment are complex. The structural characteristic of the flagella in <italic>R. intestinalis</italic> regulates its motion. The flagella help <italic>R. intestinalis</italic> to penetrate the colonic mucus layer in order to interact with the epithelium. Therefore, <italic>R. intestinalis</italic> is one of the most abundant butyrate-producing bacteria that adhere to intestinal mucin, facilitating its significant advantages for the probiotic role (<xref ref-type="bibr" rid="B90">Van den Abbeele et&#xa0;al., 2013</xref>).</p>
<p>According to the guidelines from the World Health Organization (WHO) on the Evaluation of Probiotics in Food issued in 2002, probiotics are viable microorganisms in dietary supplements that, when consumed at certain levels, stabilize the gastrointestinal tract microflora and confer health benefits to the consumer. In addition to our attempts to expand knowledge about <italic>R. intestinalis</italic> (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref> and <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>), multiple trials and experiments based on animal models have elaborated the complicated and tight relationship between <italic>R. intestinalis</italic> and the occurrence of human diseases (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>). Accumulating evidence also supports the probiotic effect of <italic>R. intestinalis</italic> in the human body, which demonstrates its fundamental benefits in maintaining a healthy homeostasis. However, the vast majority of the studies described the role of <italic>R. intestinalis</italic> through microbiome and metabolomics analyses (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>). <italic>R. intestinalis</italic> frequently appears in the list of significantly variable bacteria of different diseases and has been shown to have a beneficial role. Numerous studies have also elucidated the effect of <italic>R. intestinalis</italic> on immunity and pathophysiology. As such, there is a need to clarify the role of <italic>R. intestinalis</italic> within separate systems.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Prior bacterial discoveries associated with <italic>Roseburia intestinalis</italic>.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="left">Study</th>
<th valign="top" align="center">Nationality</th>
<th valign="top" align="center">Year</th>
<th valign="top" align="center">Journal</th>
<th valign="top" align="center">Findings</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B17">Duncan et&#xa0;al., 2002</xref>)</td>
<td valign="top" align="left">UK</td>
<td valign="top" align="left">2002</td>
<td valign="top" align="left">IJSEM</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> sp. nov., a novel saccharolytic, butyrate-producing bacterium from human feces.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B29">Hold et&#xa0;al., 2003</xref>)</td>
<td valign="top" align="left">UK</td>
<td valign="top" align="center">2003</td>
<td valign="top" align="left">A.E.M</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic>: 2.3% of fecal microbiota populations at mean. The genus <italic>Roseburia</italic> is among the most abundant known butyrate-producing bacteria in human feces.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B18">Duncan et&#xa0;al., 2004</xref>)</td>
<td valign="top" align="left">UK</td>
<td valign="top" align="center">2004</td>
<td valign="top" align="left">A.E.M</td>
<td valign="top" align="left">
<italic>Roseburia</italic> spp. seem to have a consistent contribution for acetate to butyrate formation.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B63">Mirande et&#xa0;al., 2010</xref>)</td>
<td valign="top" align="left">France</td>
<td valign="top" align="center">2009</td>
<td valign="top" align="left">J Appl Microbiol</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> is a dominant xylanolytic bacterium in dietary fiber degradation and fermentation.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B90">Van den Abbeele et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">Belgium</td>
<td valign="top" align="center">2012</td>
<td valign="top" align="left">ISME J</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> colonizes mucins most specifically with flagella and may allow for penetration into the mucus layer.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B57">Martinez et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">USA</td>
<td valign="top" align="center">2012</td>
<td valign="top" align="left">ISME J</td>
<td valign="top" align="left">Whole-grain barley enriches <italic>Roseburia intestinalis</italic> and improves metabolic dysfunctions.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B71">Qin et&#xa0;al., 2012</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="center">2012</td>
<td valign="top" align="left">Nature</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> is one of the markers that might be useful for classifying type 2 diabetes.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B78">Russell et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">UK</td>
<td valign="top" align="center">2013</td>
<td valign="top" align="left">MNFR</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> can ferment tryptophan indole-3-carboxylic acid.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B1">Arpaia et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">USA</td>
<td valign="top" align="center">2013</td>
<td valign="top" align="left">Nature</td>
<td valign="top" align="left">Butyrate from colonic microorganisms promotes the differentiation of Tregs and influences the pro- and anti-inflammatory balance.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B16">Dostal et&#xa0;al., 2015</xref>)</td>
<td valign="top" align="left">Switzerland</td>
<td valign="top" align="center">2015</td>
<td valign="top" align="left">J Nutr</td>
<td valign="top" align="left">Iron modulates butyrate production in <italic>Roseburia intestinalis</italic>.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B28">Hoffmann et&#xa0;al., 2016</xref>)</td>
<td valign="top" align="left">France</td>
<td valign="top" align="center">2016</td>
<td valign="top" align="left">ISME J</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> induced a decreased IFN&#x3b3; and IL-17 production with increased IL-22 production.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B25">Hegazy et&#xa0;al., 2017</xref>)</td>
<td valign="top" align="left">UK</td>
<td valign="top" align="center">2017</td>
<td valign="top" align="left">Gastroenterology</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> reactive CD4<sup>+</sup> T cells support intestinal homeostasis, and their function is altered during inflammation.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B40">Kasahara et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">USA</td>
<td valign="top" align="center">2018</td>
<td valign="top" align="left">Nat Microbial</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> interacts with dietary plant polysaccharides to provide protection against atherosclerosis.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B84">Shen et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="center">2018</td>
<td valign="top" align="left">JGH</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> alleviates experimental colitis pathology by inducing anti-inflammatory responses.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B73">Quan et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="center">2018</td>
<td valign="top" align="left">BBRC</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic>-derived flagellin is a negative regulator of intestinal inflammation.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B105">Zhu C. et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="center">2018</td>
<td valign="top" align="left">Mol Med Rep</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> inhibits interleukin-17 excretion and promotes regulatory T-cell differentiation.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B83">Seo et&#xa0;al., 2020</xref>)</td>
<td valign="top" align="left">Korea</td>
<td valign="top" align="center">2019</td>
<td valign="top" align="left">Cell Host Microbe</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> improves the gut ecosystem, leading to ameliorated alcoholic fatty livers.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B86">Tan et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="center">2019</td>
<td valign="top" align="left">Scandinavian J.G</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> inhibits oncostatin M and maintains tight junction integrity in a murine model.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B55">Luo et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="center">2019</td>
<td valign="top" align="left">Mol Med Rep</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> supernatant ameliorates colitis induced in mice by regulating the immune response.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B45">La Rosa et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">Norway</td>
<td valign="top" align="center">2019</td>
<td valign="top" align="left">Nat Com</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> is a primary degrader of dietary &#x3b2;-mannans.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B77">Ruff et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">USA</td>
<td valign="top" align="center">2019</td>
<td valign="top" align="left">Cell Host Microbe</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> cross-reacts with T and B cells to induce auto-APS antibody.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B41">Kellermayer, 2019</xref>)</td>
<td valign="top" align="left">USA</td>
<td valign="top" align="center">2019</td>
<td valign="top" align="left">Gastroenterology</td>
<td valign="top" align="left">
<italic>Roseburia</italic> species: prime candidates for microbial therapeutics in inflammatory bowel disease.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B98">Xu et&#xa0;al., 2021</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="center">2021</td>
<td valign="top" align="left">Therap Adv Gastroenterol</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> modulates the gut homeostasis by the gut&#x2013;brain axis.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B64">Montalban-Arques et&#xa0;al., 2021</xref>)</td>
<td valign="top" align="left">Switzerland</td>
<td valign="top" align="center">2021</td>
<td valign="top" align="left">Cell Host Microbe</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> exerts synergic therapeutical effects in anti-PD-1 therapy of colorectal cancer.</td>
</tr>
</tbody>
</table>
</table-wrap>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p><italic>Roseburia intestinalis</italic> modulation in the colonic tract. The butyrate produced <italic>by R. intestinalis</italic> exerts an extensive effect on energy metabolism, gut barrier, and anti-inflammation. <italic>R. intestinalis</italic> stimulates enteric cells, thereby excreting cytokines, promoting the differentiation of regulatory T cells (Tregs), and activating type 3 innate lymphoid cells (ILC3). It also suppresses Th17 and macrophages. Its flagellin displays an anti-inflammation effect through TLR5. The biological effect induced by <italic>R. intestinalis</italic> exhibits a significant probiotic-like role. <italic>R. intestinalis</italic> also influences the energy metabolism and the gut&#x2013;brain axis. A <italic>plus sign</italic> indicates promote and a <italic>minus sign</italic> indicates inhibit. <italic>GPCRs</italic>, G-protein coupled receptors; <italic>TSLP</italic>, thymic stromal lymphopoietin; <italic>GLP-1</italic>, glucagon-like peptide-1; <italic>PYY</italic>, peptide YY; <italic>OSM</italic>, oncostatin M; <italic>hREG3&#x3b1;</italic>, human regenerating family member 3 alpha; <italic>TLR5</italic>, Toll-like receptor 5; <italic>IDO1</italic>, indoleamine 2,3-dioxygenase-1; <italic>HIF1A-AS2</italic>, lncRNA (HIF1A-AS2).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-757718-g001.tif"/>
</fig>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p><italic>Roseburia</italic> dysbiosis-associated diseases exist in different systems. <italic>IBD</italic>, inflammatory bowel diseases; <italic>IBS</italic>, irritable bowel syndrome; <italic>NAFLD</italic>, non-alcoholic fatty liver disease; <italic>AFLD</italic>, alcoholic fatty liver disease; <italic>CRD</italic>, chronic rheumatoid disease; <italic>APS</italic>, antiphospholipid syndrome; <italic>HIV</italic>, human immunodeficiency virus; <italic>H7N9</italic>, avian influenza A (H7N9); <italic>ARDS</italic>, acute respiratory distress syndrome.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-757718-g002.tif"/>
</fig>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Studies associated with <italic>Roseburia</italic> spp. in different diseases of the different systems.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="left">Study</th>
<th valign="top" align="center">Country</th>
<th valign="top" align="center">System</th>
<th valign="top" align="center">Disease</th>
<th valign="top" align="center">Source</th>
<th valign="top" align="center">Size</th>
<th valign="top" align="center">Sample</th>
<th valign="top" align="center">Method</th>
<th valign="top" align="center">Findings</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B22">Gevers et&#xa0;al., 2014</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">Crohn&#x2019;s</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">668</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> <bold>&#x2193;</bold>
</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B65">Morgan et&#xa0;al., 2012</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">Crohn&#x2019;s</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">223</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rDNA V3&#x2013;V5</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B44">Kumari et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">India</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">UC</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">40</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">FISH&#x2013;flow cytometry</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B75">Rajilic-Stojanovic et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">Serbia</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">UC</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">45</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> spp. &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B8">Chassard et&#xa0;al., 2012</xref>)</td>
<td valign="top" align="left">France</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">IBS</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">26</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">FISH</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B23">Gobert et&#xa0;al., 2016</xref>)</td>
<td valign="top" align="left">France</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">IBS</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">91</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V5&#x2013;V6</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B68">Parthasarathy et&#xa0;al., 2016</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">Constipation</td>
<td valign="top" align="left">Female</td>
<td valign="top" align="center">50</td>
<td valign="top" align="left">Mucosa feces</td>
<td valign="top" align="left">16S rRNA V3&#x2013;V5</td>
<td valign="top" align="left">
<italic>Roseburia</italic> correlated with faster colonic transit</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B106">Zhu et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">NAFLD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">53</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B80">Saltzman et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">Australia</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">NAFLD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center"/>
<td valign="top" align="left"/>
<td valign="top" align="left">Review</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B76">Raman et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">UK</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">NAFLD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">60</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2191;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B83">Seo et&#xa0;al., 2020</xref>)</td>
<td valign="top" align="left">Korea</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">AFLD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">212</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> spp. &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B4">Bajaj et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">Cirrhosis</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">180</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA, 16S rDNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> was protective against hospitalizations in the DNA model</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B3">Bajaj et&#xa0;al., 2012</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Digestion</td>
<td valign="top" align="left">Cirrhosis</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">53</td>
<td valign="top" align="left">Mucosa</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193; in hepatic encephalopathy mucosal microbiome</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B20">Forbes et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">Canada</td>
<td valign="top" align="left">Autoimmunity</td>
<td valign="top" align="left">Rheumatoid arthritis</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">44</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B11">Consolandi et&#xa0;al., 2015</xref>)</td>
<td valign="top" align="left">Italy</td>
<td valign="top" align="left">Autoimmunity</td>
<td valign="top" align="left">Beh&#xe7;et syndrome</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">38</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B69">Patrone et&#xa0;al., 2017</xref>)</td>
<td valign="top" align="left">Italy</td>
<td valign="top" align="left">Autoimmunity</td>
<td valign="top" align="left">Systemic sclerosis</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">18</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V3&#x2013;V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193; in patient with gastrointestinal involvement</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B79">Salem et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">France</td>
<td valign="top" align="left">Autoimmunity</td>
<td valign="top" align="left">CRD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">1084</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">Review</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B77">Ruff et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Autoimmunity</td>
<td valign="top" align="left">APS</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">35</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> involved APS occuring</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B71">Qin et&#xa0;al., 2012</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Metabolism</td>
<td valign="top" align="left">Diabetes</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">345</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">MGWAS</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B87">Tilg and Moschen, 2014</xref>)</td>
<td valign="top" align="left">Australia</td>
<td valign="top" align="left">Metabolism</td>
<td valign="top" align="left">Diabetes</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center"/>
<td valign="top" align="left"/>
<td valign="top" align="left">Review</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B46">Leiva-Gea et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">Spain</td>
<td valign="top" align="left">Metabolism</td>
<td valign="top" align="left">Diabetes</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">43</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V2&#x2013;V3</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B34">Jamshidi et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">Iran</td>
<td valign="top" align="left">Metabolism</td>
<td valign="top" align="left">Diabetes</td>
<td valign="top" align="left"/>
<td valign="top" align="center"/>
<td valign="top" align="left"/>
<td valign="top" align="left">Review</td>
<td valign="top" align="left">The most common bacterial alterations included <italic>Roseburia</italic> spp.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B88">Tims et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">Netherlands</td>
<td valign="top" align="left">Metabolism</td>
<td valign="top" align="left">Obesity</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">80</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> &#x2191;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B21">Gargari et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">Italy</td>
<td valign="top" align="left">Metabolism</td>
<td valign="top" align="left">Hyperlipidemia</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">30</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B42">Keshavarzian et&#xa0;al., 2015</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Nervous</td>
<td valign="top" align="left">Parkinson&#x2019;s</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">72</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B81">Sampson et&#xa0;al., 2016</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Nervous</td>
<td valign="top" align="left">Parkinson&#x2019;s</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">12</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> spp. &#x2191;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B104">Zheng et&#xa0;al., 2016</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Nervous</td>
<td valign="top" align="left">Depression</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">121</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4&#x2013;V5</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B36">Jiang et&#xa0;al., 2015</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Nervous</td>
<td valign="top" align="left">Depression</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">76</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V3&#x2013;V4</td>
<td valign="top" align="left">Roseburia &#x2191;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B53">Liu et&#xa0;al., 2016</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Nervous</td>
<td valign="top" align="left">Depression</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">100</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> as a feature of depression compared with D-IBS</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B39">Karlsson et&#xa0;al., 2012</xref>)</td>
<td valign="top" align="left">Sweden</td>
<td valign="top" align="left">Circulation</td>
<td valign="top" align="left">Atherosclerosis</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">25</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">Sequencing</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B40">Kasahara et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Circulation</td>
<td valign="top" align="left">Atherogenesis</td>
<td valign="top" align="left">Mice</td>
<td valign="top" align="center">342</td>
<td valign="top" align="left">Ceca</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B52">Liu et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Circulation</td>
<td valign="top" align="left">CAD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">201</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V3&#x2013;V4</td>
<td valign="top" align="left">Bacterial co-abundance group at different stages of CAD was represented by <italic>Roseburia.</italic>
</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B105">Zhu Q. et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Circulation</td>
<td valign="top" align="left">CAD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">168</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B100">Yan et&#xa0;al., 2017</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Circulation</td>
<td valign="top" align="left">Hypertension</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">120</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">MGWAS</td>
<td valign="top" align="left">
<italic>Roseburia</italic> spp. &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B72">Qin et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Circulation</td>
<td valign="top" align="left">Hypertension</td>
<td valign="top" align="left">Rat</td>
<td valign="top" align="center">16</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B103">Zheng et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Circulation</td>
<td valign="top" align="left">Heart failure</td>
<td valign="top" align="left">Rat</td>
<td valign="top" align="center">30</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">Sequencing</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193; in the 4w-HF group</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B74">Rajagopala et&#xa0;al., 2016</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Hematology</td>
<td valign="top" align="left">Leukemia</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">51</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B6">Bindels et&#xa0;al., 2015</xref>)</td>
<td valign="top" align="left">Belgium</td>
<td valign="top" align="left">Hematology</td>
<td valign="top" align="left">Leukemia</td>
<td valign="top" align="left">Mice</td>
<td valign="top" align="center">33</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">Increased <italic>Roseburia</italic> spp. ameliorated leukemia progression.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B59">McClorry et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">Peru</td>
<td valign="top" align="left">Hematology</td>
<td valign="top" align="left">Anemia</td>
<td valign="top" align="left">Infant</td>
<td valign="top" align="center">95</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B15">Dostal et&#xa0;al., 2012</xref>)</td>
<td valign="top" align="left">Switzerland</td>
<td valign="top" align="left">Hematology</td>
<td valign="top" align="left">Anemia</td>
<td valign="top" align="left">Rat</td>
<td valign="top" align="center">40</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V2&#x2013;V3</td>
<td valign="top" align="left">
<italic>Roseburia</italic> spp. &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B14">Dillon et&#xa0;al., 2017</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Infection</td>
<td valign="top" align="left">HIV</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">32</td>
<td valign="top" align="left">Mucosa</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B33">McHardy et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">USA.</td>
<td valign="top" align="left">Infection</td>
<td valign="top" align="left">HIV</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">60</td>
<td valign="top" align="left">Mucosa</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193; in those not receiving anti-retroviral therapy.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B24">Guillen et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">Spain</td>
<td valign="top" align="left">Infection</td>
<td valign="top" align="left">HIV</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">156</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> predicts the presence of gut dysbiosis.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B56">Maji et&#xa0;al., 2018</xref>)</td>
<td valign="top" align="left">India</td>
<td valign="top" align="left">Infection</td>
<td valign="top" align="left">Tuberculosis</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">12</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V3</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2191;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B31">Hu et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Infection</td>
<td valign="top" align="left">Tuberculosis</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">61</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">Sequencing</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B51">Liang et&#xa0;al., 2017</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Cancer</td>
<td valign="top" align="left">CRC</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">439</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B102">Yu et&#xa0;al., 2017</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Cancer</td>
<td valign="top" align="left">CRC</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">168</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">MGWAS</td>
<td valign="top" align="left">
<italic>Roseburia intestinalis</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B10">Chen et&#xa0;al., 2013</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Cancer</td>
<td valign="top" align="left">CRC</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">100</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V1&#x2013;V3</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B93">Wang et&#xa0;al., 2012</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Cancer</td>
<td valign="top" align="left">CRC</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">94</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V3</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B35">Jiang et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Cancer</td>
<td valign="top" align="left">Nasopharyngeal carcinoma</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">59</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V3&#x2013;V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> spp. &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B94">Wang et&#xa0;al., 2019</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Cancer</td>
<td valign="top" align="left">Cervical cancer</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">13</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> spp. were more abundant in the CCa group.</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B50">Li et&#xa0;al., 2014</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Respiration</td>
<td valign="top" align="left">ARDS</td>
<td valign="top" align="left">Rat</td>
<td valign="top" align="center">16</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B99">Xu et&#xa0;al., 2017</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Urinary</td>
<td valign="top" align="left">CKD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">64</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B37">Jiang et&#xa0;al., 2017</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Urinary</td>
<td valign="top" align="left">CKD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">112</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">qPCR, 16S rRNA</td>
<td valign="top" align="left">
<italic>Roseburia</italic> &#x2193;</td>
</tr>
<tr>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B95">Wu, I. W. et&#xa0;al., 2020</xref>)</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">Urinary</td>
<td valign="top" align="left">CKD</td>
<td valign="top" align="left">Human</td>
<td valign="top" align="center">130</td>
<td valign="top" align="left">Feces</td>
<td valign="top" align="left">16S rRNA V4</td>
<td valign="top" align="left">
<italic>Roseburia</italic> was negatively correlated with CKD severity.</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Arrows &#x2191; &#x2193; : the Roseburia changes in specific disease patients compared with controls.</p>
</fn>
<fn>
<p>UC, ulcerative colitis; IBS, irritable bowel syndrome; FISH, fluorescence in situ hybridization; MGWAS, metagenome-wide association study; NAFLD, non-alcoholic fatty liver disease; AFLD, alcoholic fatty liver disease; CRD, chronic rheumatoid disease; APS, antiphospholipid syndrome; CAD, coronary artery disease; HIV, human immunodeficiency virus; H7N9, avian influenza A (H7N9); CRC, colorectal cancer; ARDS, acute respiratory distress syndrome; NMOSD, neuromyelitis optical spectrum disorders.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s2">
<title>Digestive System</title>
<sec id="s2_1">
<title>The Role of <italic>R. intestinalis</italic> in Digestive Diseases</title>
<p>
<italic>R. intestinalis</italic>, as a digestive tract resident, plays a role in metabolic reprogramming, immune activation, and in sustaining the gut barrier. Notable prominent features of inflammatory bowel disease (IBD) [encompassing Crohn&#x2019;s disease (CD) and ulcerative colitis (UC)] include microbiota dysbiosis, impaired innate immunity, and extensive tissue damage (mainly in the colon). Global cohorts (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>) have uncovered the dysbiosis microbiome profile of IBD with significantly low numbers of <italic>Roseburia</italic>. A large sample size-based cohort study of the microbiome research project involving 668 CD patients and healthy subjects revealed a low number of <italic>R. intestinalis</italic> in CD patients (<xref ref-type="bibr" rid="B22">Gevers et&#xa0;al., 2014</xref>). Functional enrichment analysis further demonstrated more oxidative stress-activated signaling pathways and fewer carbohydrate and amino acid metabolism pathways associated with nutrition transportation and absorption (<xref ref-type="bibr" rid="B22">Gevers et&#xa0;al., 2014</xref>). Another pediatric CD study reported a low abundance of core bacteria, including <italic>Faecalibacterium</italic> and <italic>Roseburia</italic>, in patients with ileal CD (<xref ref-type="bibr" rid="B65">Morgan et&#xa0;al., 2012</xref>). Antibiotic exposure was demonstrated to magnify the above-mentioned intestinal dysbiosis in CD patients. Previous investigations by our research group revealed similar results of reduced <italic>Roseburia</italic> in CD patients (<xref ref-type="bibr" rid="B84">Shen et&#xa0;al., 2018</xref>). UC and CD have similar changes in <italic>Roseburia</italic>, although their signatures in genetics and pathophysiology are widely different. For instance, Kumari revealed lower abundance of <italic>R. intestinalis</italic> and decreased levels of fecal SCFAs in UC patients compared to the healthy group, particularly for butyrate (<xref ref-type="bibr" rid="B44">Kumari et&#xa0;al., 2013</xref>). Elsewhere, a study conducted in Serbia involving 15 UC patients and 15 healthy controls reported decreased levels of <italic>Roseburia</italic> sp. in the microbiota of UC patients, and the dysbiosis in UC was persistent in time and segment dimensions (<xref ref-type="bibr" rid="B75">Rajilic-Stojanovic et&#xa0;al., 2013</xref>). Therefore, it is increasingly becoming apparent that <italic>Roseburia</italic> is depleted in IBD <italic>via</italic> a mechanism associated with the anti-inflammatory effect, barrier protective effect, and the close connection of <italic>R. intestinalis</italic> with innate immunity. Irritable bowel syndrome (IBS) is a colonic transit and sensory disorder characterized by constipation, diarrhea, or mixed subgroups. Results from 16S ribosomal RNA (rRNA) sequencing and fluorescence <italic>in situ</italic> hybridization (FISH) analysis in a French cohort showed that constipated-IBS (C-IBS) patients had lesser <italic>Roseburia</italic> abundance than did the controls (<xref ref-type="bibr" rid="B8">Chassard et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B23">Gobert et&#xa0;al., 2016</xref>). These findings demonstrate that both IBS and constipation are likely associated with low <italic>Roseburia</italic> abundance and impaired colonic transit. For instance, a previous investigation of the colonic mucosal microbiota, fecal microbiota, and the transit signature between constipated patients and healthy controls revealed a correlation of the <italic>Roseburia</italic> genus with faster colonic transit (<xref ref-type="bibr" rid="B68">Parthasarathy et&#xa0;al., 2016</xref>). Butyrate, mainly metabolized in the liver, exerts a local inhibitory effect against liver adipogenesis and adipose accumulation (<xref ref-type="bibr" rid="B7">Canfora et&#xa0;al., 2015</xref>). A high-fat supplement elevates the triglyceride content and decreases &#x3b2;-oxidation within the liver. Studies have demonstrated that butyrate or butyrate-producing bacterial strains are related with reduced ectopic lipids in a non-alcoholic fatty liver disease (NAFLD) animal model (<xref ref-type="bibr" rid="B58">Mattace Raso et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B38">Jin et&#xa0;al., 2015</xref>). Based on existing factors, there is strong evidence that <italic>Roseburia</italic> is more underrepresented in NAFLD patients than in the control group (<xref ref-type="bibr" rid="B106">Zhu et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B80">Saltzman et&#xa0;al., 2018</xref>). However, some researchers reported divergent results and proposed that the altered diet and habitat effects may explain the discrepancy in the results (<xref ref-type="bibr" rid="B76">Raman et&#xa0;al., 2013</xref>). Seo et&#xa0;al. (2020) reported that alcoholic fatty liver disease (AFLD) displayed a significant depletion of <italic>R. intestinalis</italic>, and such dysbiosis correlates with a medical history of alcohol intake in a cohort of Korean twins (<xref ref-type="bibr" rid="B83">Seo et&#xa0;al., 2020</xref>). <italic>R. intestinalis</italic> potentially ameliorated the experimental AFLD model by restoring the gut barrier integrity. The flagellin of <italic>R. intestinalis</italic> is an active microbial ingredient that elevates tight junction protein and modulates immune response <italic>via</italic> the TLR5 receptor (<xref ref-type="bibr" rid="B83">Seo et&#xa0;al., 2020</xref>). In other digestive disorders such as cirrhosis, the fecal microbial sequencing results of cirrhosis patients showed that <italic>Roseburia</italic> protected against hospitalization. This study used fecal RNA instead of DNA for microbial 16S rRNA sequencing in order to better understand the bacterial metabolic activity (<xref ref-type="bibr" rid="B4">Bajaj et&#xa0;al., 2018</xref>). Hepatic encephalopathy is a severe complication of hepatic cirrhosis, commonly accompanied by impaired gut permeability. In a past study, lower <italic>Roseburia</italic> abundance was reported in sigmoid mucosal microbiota (<xref ref-type="bibr" rid="B3">Bajaj et&#xa0;al., 2012</xref>). Of note is that the majority of studies support the view that <italic>Roseburia</italic> exerts a protective role in most digestive diseases. <italic>R. intestinalis</italic>, together with the metagenome, plays beneficial functions in maintaining health and preventing diseases in animal and cell models. However, the primary culture of <italic>R. intestinalis</italic> strains remains a major hindrance, and there is a lack of well-designed clinical trials to confirm the protective role of <italic>R. intestinalis</italic>.</p>
</sec>
<sec id="s2_2">
<title>Mechanisms of <italic>R. intestinalis</italic> in Digestive Diseases</title>
<p>Extensive effects of <italic>R. intestinalis</italic> and its derivatives have been implicated in immune modulation and inflammatory regulation. <italic>R. intestinalis</italic> primarily functions as a primary butyrate-producing bacterium. Butyrate produced by commensal microbes was revealed to promote the proliferation of extrathymic regulatory T cells (Tregs) through intrinsic enhancer conserved non-coding sequence 1 (CNS1) (<xref ref-type="bibr" rid="B1">Arpaia et&#xa0;al., 2013</xref>). The mechanism was essential for extrathymic Treg differentiation, but dispensable for thymic Tregs. Tregs, as vital anti-inflammatory lymphocytes, produce interleukin-10 (IL-10), transforming growth factor beta (TGF-&#x3b2;), and interferon gamma (IFN&#x3b3;). Microbial butyrate has been demonstrated to contribute to inner pro- and anti-inflammatory balance by influencing the differentiation of Tregs (<xref ref-type="bibr" rid="B25">Hegazy et&#xa0;al., 2017</xref>). In view of these findings, our research group investigated the role of Tregs in mouse models induced by bacterial suspension gavage and cell line co-culture. The results demonstrated that <italic>R. intestinalis</italic> inhibited the secretion of interleukin-17 (IL-17) and promoted the differentiation of Tregs in 2,4,6-trinitrobenzene sulfonic acid (TNBS)-induced colitis (<xref ref-type="bibr" rid="B105">Zhu C. et&#xa0;al., 2018</xref>). Recent evidence showed that 5-hydroxyindoleacetic acid (5-HIAA) produced <italic>via</italic> butyrate stimulation can bind the aryl hydrocarbon receptor (AhR) in regulatory B cells (Bregs), inducing suppressive effects (<xref ref-type="bibr" rid="B62">Michaudel and Sokol, 2020</xref>). In memory T cells, butyrate activates &#x3b2;-oxidation and significantly influences the state and function of cells (<xref ref-type="bibr" rid="B2">Bachem et&#xa0;al., 2019</xref>). It is possible that an impaired production of butyrate may contribute to the pro-inflammatory polarization of intestinal macrophages. In addition, butyrate potentially regulates the intestinal macrophage function <italic>via</italic> histone deacetylase inhibition, and this causes a dysfunction of the immune response (<xref ref-type="bibr" rid="B62">Michaudel and Sokol, 2020</xref>). Evidence shows that gut microbiota-derived butyrate modulates the functions of type 2 innate lymphoid cells (ILC2), which block their uncontrolled activation; as such, they consequently exert a negative role in lung inflammation and asthma (<xref ref-type="bibr" rid="B49">Lewis et&#xa0;al., 2019</xref>). Notably, the involvement of intracellular metabolism is supported by the butyrate-mediated induction of changes in mitochondrial ROS (mROS) production and glycolysis (<xref ref-type="bibr" rid="B49">Lewis et&#xa0;al., 2019</xref>). Additionally, the preferential use of Fas over glucose by ILC2 to maintain their function in infection or nutritional stress suggests a direct role of butyrate in fueling the tricarboxylic acid cycle (<xref ref-type="bibr" rid="B62">Michaudel and Sokol, 2020</xref>). Consequently, butyrate derived from <italic>R. intestinalis</italic> may exert a profound immune effect in the gut and establish the unique status of <italic>R. intestinalis.</italic>
</p>
<p>Together with similar models, our study demonstrated another mechanism of <italic>R. intestinalis</italic> in decreasing the secretion of the macrophage-derived oncostatin M (OSM) and maintaining intestinal mucosal permeability to alleviate DSS-induced colitis (<xref ref-type="bibr" rid="B86">Tan et&#xa0;al., 2019</xref>). We elucidated Crohn&#x2019;s bacterial composition signature with reduced <italic>R. intestinalis</italic> in CD through 16S rRNA sequencing of fecal samples obtained from CD patients and healthy controls (<xref ref-type="bibr" rid="B101">Yang et&#xa0;al., 2020</xref>). In a subsequent experiment, we discovered that <italic>R. intestinalis</italic> alleviates intestinal inflammation by enhancing the proliferation of Tregs and promoting the secretion of anti-inflammatory cytokines [IL-10, TGF-&#x3b2;, and thymic stromal lymphopoietin (TSLP)] (<xref ref-type="bibr" rid="B84">Shen et&#xa0;al., 2018</xref>). Through gas chromatography&#x2013;mass spectrometry (GC-MC) analysis, we affirmed that SCFAs were present in the <italic>R. intestinalis</italic> non-protein supernatant. Elsewhere, the <italic>R. intestinalis</italic> non-protein supernatant was found to alleviate TNBS- and DSS-induced colitis by reducing the percentages of colonic inflammatory macrophages and Th17 cells. Such shifts downregulated the IL-6 and STAT3 in both mouse models and cell lines (<xref ref-type="bibr" rid="B55">Luo et&#xa0;al., 2019</xref>). The above-described findings suggest a significant anti-inflammatory and immune-modulating effect of the butyrate produced by <italic>R. intestinalis</italic> exhibited in the gut. Our novel findings are consistent with the results reported by (<xref ref-type="bibr" rid="B1">Arpaia et&#xa0;al., 2013</xref> and <xref ref-type="bibr" rid="B25">Hegazy et&#xa0;al., 2017</xref>).</p>
<p>A previous investigation by (<xref ref-type="bibr" rid="B70">Patterson et&#xa0;al., 2017</xref>) demonstrated that <italic>R. hominis</italic> potentially strengthens the function of the gut barrier and enhances the expansion of the population of Tregs, possibly <italic>via</italic> flagellin/Toll-like receptor 5 (TLR5) signaling. Also, (<xref ref-type="bibr" rid="B91">Vijayan et&#xa0;al., 2018</xref>) found that activated TLR5 could stimulate type 3 innate lymphoid cells (ILC3) and promote the production of interleukin-22 (IL-22), which sustains the gut barrier function. In our research, for a clear definition of the physiological role of flagellin, we used the recombinant flagellin of <italic>R. intestinalis</italic>. The analysis revealed that flagellin played an inflammatory inhibitory role by upregulating lncRNA (HIF1A-AS2) <italic>via</italic> p38/STAT1 signaling, exhibiting an anti-inflammatory role (<xref ref-type="bibr" rid="B73">Quan et&#xa0;al., 2018</xref>). At the same time, <italic>R. intestinalis</italic>-derived flagellin ameliorated colitis by targeting the miR-223-3p-mediated activation of NLRP3 inflammasome and pyroptosis. The method combined miRDB and TargetScan database prediction and experiment validation in order to ascertain the beneficial role of <italic>R. intestinalis</italic> in colitis (<xref ref-type="bibr" rid="B95">Wu, I. W. et&#xa0;al., 2020</xref>). ILC3s is a member of innate lymphatic cells, and its widespread effects in pathogen resistance, regulation of autoimmune inflammation, tissue remodeling, cancer, and metabolic homeostasis have been reported (<xref ref-type="bibr" rid="B43">Klose and Artis, 2016</xref>). <italic>R. intestinalis</italic> can ferment tryptophan into indole-3-carboxylic acid, a member of the indoles (<xref ref-type="bibr" rid="B78">Russell et&#xa0;al., 2013</xref>). In addition, some tryptophan metabolites (e.g., indoles including indole-3-carboxylic acid) may activate the AhR of ILC3. For instance, <xref ref-type="bibr" rid="B28">Hoffmann et&#xa0;al. (2016)</xref>, using gnotobiotic mice transplanted with <italic>R</italic>. <italic>intestinalis</italic>, investigated the physiological impact on the host from the aspects of colonic histology, SCFAs, immune signature, transcriptome, and bile acid metabolism. They revealed that <italic>R. intestinalis</italic> could induce the upregulation of IL-22 and the downregulation of IL-17 and IFN&#x3b3; in bacteria-transplanted gnotobiotic mice (<xref ref-type="bibr" rid="B28">Hoffmann et&#xa0;al., 2016</xref>). Corresponding findings also support an essential role of ILC3 in the immune modulation of <italic>R. intestinalis</italic>. In our recent study, we have evaluated whether <italic>R. intestinalis</italic> could significantly influence the activity of indoleamine 2,3-dioxygenase-1 (IDO1, an enzyme dominating tryptophan metabolism) and compared the results to other glycolysis lipolytic and amino acid metabolic enzymes (unpublished). In another recent project in 2019, we aimed to investigate the balancing mechanism between intracellular and extracellular tryptophan metabolism. The results of the study demonstrated that intracellular IDO1-mediated tryptophan metabolism potentially altered <italic>R. intestinalis</italic> flagellin&#x2013;TLR5 signaling. Also, extracellular tryptophan metabolic indoles were suggested to activate ILC3 and IL-22 production <italic>via</italic> the AhR. Notably, the combined effect may induce colonic and systemic anti-inflammatory effects by immunometabolism. More and more evidence had accumulated to support the potential role the gut&#x2013;brain axis plays in digestive disorders. For example, <italic>R. intestinalis</italic> may function in the modulation of the gut&#x2013;brain axis by reducing the level of colonic 5-hydroxytryptamine (5-HT), inhibiting the expression of glial fibrillary acidic protein (GFAP), and alleviating the depression-like behaviors in colitis model mice (<xref ref-type="bibr" rid="B98">Xu et&#xa0;al., 2021</xref>). These pieces of evidence provide a new perspective on the therapeutic role of <italic>R. intestinalis</italic> in inflammatory bowel diseases.</p>
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<sec id="s3">
<title>Autoimmune Disorders</title>
<p>Autoimmune diseases usually involve multiple systems, including the intestine. Bacteria interact with enteric mucosal immune cells by presenting antigen and chemical signals to organs, such as the thymus, brain, liver, and the pancreas. It is universally accepted that the immune system mounts a response to invaders. Usually, autoimmune diseases have complicated pathogenesis associated with gut microbes. According to the sequencing results of the fecal samples obtained from 44 Canadian rheumatic arthritis (RA) patients, Forbes et&#xa0;al. found a decreased <italic>Roseburia</italic> abundance, which was used to distinguish RA patients from the healthy group in a random forest classification model (<xref ref-type="bibr" rid="B20">Forbes et&#xa0;al., 2018</xref>). In addition, the <italic>Roseburia</italic> genus was a potential marker of health given its butyrate-producing and anti-inflammatory properties (<xref ref-type="bibr" rid="B20">Forbes et&#xa0;al., 2018</xref>). Notably, identical lower gut <italic>Roseburia</italic> abundance phenomena were found in adults with Beh&#xe7;et syndrome and systemic sclerosis, particularly in systemic sclerosis patients with gastrointestinal involvement (<xref ref-type="bibr" rid="B11">Consolandi et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B69">Patrone et&#xa0;al., 2017</xref>). However, these studies were limited by the small sample size of the cohorts. Elsewhere, a systematic literature review of studies involving the collection of fecal samples from 1,084 patients with chronic rheumatic diseases and healthy controls revealed a decreased number of <italic>Roseburia</italic> species in enrolled patients (<xref ref-type="bibr" rid="B79">Salem et&#xa0;al., 2019</xref>).</p>
<p>Bacteria sometimes imitate autologous antigens to induce autoimmune antibodies. In antiphospholipid syndrome (APS), researchers have discovered cross-reactivity between non-orthologous mimotopes expressed by <italic>R. intestinalis</italic> and the autoantigen &#x3b2;2-glycoprotein (&#x3b2;2GPI) (<xref ref-type="bibr" rid="B77">Ruff et&#xa0;al., 2019</xref>). Besides, the anti-<italic>R. intestinalis</italic> mimotope immunoglobulin G (IgG) was significantly elevated in APS patients and was correlated with anti-&#x3b2;2GPI IgG autoantibodies. Meanwhile, <italic>R. intestinalis</italic> gavage could trigger an autoimmune pathology in susceptible mice (<xref ref-type="bibr" rid="B77">Ruff et&#xa0;al., 2019</xref>). However, due to <italic>R. intestinalis</italic> appearing as a type of common gut-friendly bacteria, the specific autoimmune phenotype transformation needs stricter consideration in such a mouse model. Otherwise, the on&#x2013;off switch may hide in a particular microenvironment. These findings provide strong evidence that <italic>R. intestinalis</italic> displays beneficial effects in most patients with autoimmune diseases despite the occasionally complicated effects. As such, further exploration is warranted to elucidate the mechanism of the interaction of <italic>R. intestinalis</italic> with the immune system, an adaptation of immune cells, perception, and evolution with intestinal microbes.</p>
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<title>Metabolic Diseases</title>
<p>Through dysbiosis-associated Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis, researchers have demonstrated that intestinal microbiome dysbiosis alters the commensal remolding and shifts the nutritional metabolism. Accumulating evidence reveals the tight association of butyrate with glucose homeostasis, insulin resistance, and appetite (<xref ref-type="bibr" rid="B7">Canfora et&#xa0;al., 2015</xref>). Metabolic diseases are typically multi-nutrition-utilizing disorders and abnormalities of immune-induced hormones. As mentioned above, <italic>Roseburia</italic> spp. are a critical butyrate-producing bacteria cluster. Several researchers have reported that the potential role of butyrate is by inhibiting histone deacetylase (HDAC) or interacting with G protein-coupled receptors (GPCRs) such as free fatty acid receptors 2 (FFAR2) and 3 (FFAR3) in the control of body weight and insulin sensitivity (<xref ref-type="bibr" rid="B7">Canfora et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B66">Morrison and Preston, 2016</xref>; <xref ref-type="bibr" rid="B60">McNabney and Henagan, 2017</xref>). Butyrate can increase energy expenditure and fat oxidation, thereby exerting a further influence on energy homeostasis and lipid metabolism. Studies have also reported that FFAR 2/3-associated signaling exerts a potential regulatory role for butyrate in glucose homeostasis (<xref ref-type="bibr" rid="B7">Canfora et&#xa0;al., 2015</xref>). To date, there is strong evidence on the relationship between <italic>R. intestinalis</italic> and type 2 diabetes mellitus (T2DM) (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>). A metagenome-wide association study (MGWAS) in a large-scale population-based cohort study in China based on deep shotgun sequencing of the gut microbial DNA from 345 Chinese individuals. discovered a decreased trend in the abundance of <italic>R. intestinalis</italic> in T2DM patients (<xref ref-type="bibr" rid="B71">Qin et&#xa0;al., 2012</xref>). These results were confirmed in subsequent studies (<xref ref-type="bibr" rid="B87">Tilg and Moschen, 2014</xref>). However, the big question is whether different types of diabetes determine the diversity of the gut <italic>Roseburia</italic> population. Another investigation that evaluated the gut microbiota and metabolism in patients with type 1 diabetes mellitus (T1DM) reported lower <italic>R. intestinalis</italic> abundance (<xref ref-type="bibr" rid="B46">Leiva-Gea et&#xa0;al., 2018</xref>). Furthermore, a systemic review involving 26 studies, including 2,600 children and 189 adults, revealed that the most significant bacterial alterations in T1DM patients involved <italic>Roseburia</italic> spp. (<xref ref-type="bibr" rid="B34">Jamshidi et&#xa0;al., 2019</xref>). Taken together, these findings coincide with the essential role of butyrate in glucose homeostasis. Meanwhile, obesity shares the same difference in gut commensal compositions. A study by (<xref ref-type="bibr" rid="B88">Tims et&#xa0;al., 2013</xref>) recruited 40 monozygotic twin pairs and explored the association of microbial signatures with body mass index (BMI). The results revealed the positive correlation between <italic>R. intestinalis</italic> and BMI; that is, individuals with higher BMI carried more abundant butyrate producers. Another study reported that children and adolescents with primary hyperlipidemia had a lower abundance of <italic>Roseburia</italic>, suggesting the correlation of the <italic>Roseburia</italic> genus with the changes in lipidemic parameters (<xref ref-type="bibr" rid="B21">Gargari et&#xa0;al., 2018</xref>). These pieces of research demonstrate that <italic>R. intestinalis</italic> plays an extensively instrumental role in metabolic disorders. However, further studies are warranted to elucidate whether <italic>R. intestinalis</italic> plays a more pivotal role in metabolic diseases than do widely studied microorganisms, such as <italic>Akkermansia muciniphila</italic> and Christensenellaceae. Some of the significant shortcomings of metabolism research include the lack of an effective design for primary bacterial culture, identification of animal and cell experimental function, and necessary clinical trials. Perhaps, <italic>R. intestinalis</italic> will be included in mixed probiotic prescriptions for metabolic disorders in the future.</p>
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<title>Nervous System</title>
<p>The microbiota&#x2013;gut&#x2013;brain axis modulates the interaction between the nervous system and the intestinal environment. Bacterial composition and bacterial metabolites influence the function of both the enterocytes and exocrine glands. The effects of exocrine molecules on the enteric nervous system are either direct or indirect. Compelling evidence shows that immune cells such as ILC3 can interact with the colonic glia to form a glia&#x2013;ILC3 axis, whereas microbes, including <italic>Roseburia</italic>, transmit signals to the colonic glia to stimulate the IL-22 production of ILC3 mediated by glial neurotrophic factors (<xref ref-type="bibr" rid="B5">Bernink et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B32">Ibiza et&#xa0;al., 2016</xref>). These complicated interaction axes involve microbes, immunity, and nerve. Therefore, gut bacteria such as <italic>Roseburia</italic> exert a potential impact on the pathogenetic process of nervous system diseases (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>). An investigation by Prof. Wei demonstrated that <italic>R. intestinalis</italic> influenced the 5-HT level and GFAP expression in colonic tissue, alleviating the depression-like behavior in mice (<xref ref-type="bibr" rid="B98">Xu et&#xa0;al., 2021</xref>). This piece of evidence supports the role of <italic>Roseburia</italic> in neural disorders. In another study, the mucosal and fecal 16S rRNA-based assay of patients with Parkinson&#x2019;s disease (PD) and controls showed that <italic>Roseburia</italic> was significantly more abundant in controls than in PD patients (<xref ref-type="bibr" rid="B42">Keshavarzian et&#xa0;al., 2015</xref>). Additionally, when the fecal microbiota obtained from PD patients or healthy controls were transplanted into germ-free mice <italic>via</italic> oral gavage, the results indicated that the abundance of <italic>Roseburia</italic> spp. increased in animals colonized with microbiota from PD patients (<xref ref-type="bibr" rid="B42">Keshavarzian et&#xa0;al., 2015</xref>). It was speculated that <italic>Roseburia</italic> spp.-associated gut dysbiosis promoted the aggregation of &#x3b1;-synuclein <italic>via</italic> colonic motor defect, and the subsequent specific changes enhanced neuroinflammation and the progression of PD (<xref ref-type="bibr" rid="B81">Sampson et&#xa0;al., 2016</xref>). Considering the impact of the transplant on the actual dysbiosis of PD patients, the divergent results should be analyzed carefully and cautiously. Aside from PD, depression is another global neurological concern. Previous evidence indicated a lower abundance of <italic>Roseburia</italic> in major depressive disorder (MDD) patients than in the matched healthy group (<xref ref-type="bibr" rid="B104">Zheng et&#xa0;al., 2016</xref>). In the same study, fecal microbiota transplantation (FMT) from MDD patients to germ-free recipient mice could induce depression-like behaviors. Moreover, the transplanted depression mice were characterized by an enriched carbohydrate and amino acid metabolism (<xref ref-type="bibr" rid="B104">Zheng et&#xa0;al., 2016</xref>). Nevertheless, cohort data from a study by Jiang et&#xa0;al. revealed a relatively more abundant <italic>Roseburia</italic> in active MDD patients than in the healthy group (<xref ref-type="bibr" rid="B36">Jiang et&#xa0;al., 2015</xref>). Liu et&#xa0;al. confirmed that the reduced <italic>Roseburia</italic> abundance could be an independent label for MDD compared to diarrhea-predominant IBS (D-IBS) (<xref ref-type="bibr" rid="B53">Liu et&#xa0;al., 2016</xref>). Therefore, the specific microbial profile of nervous disorders should be defined and clarified cautiously in consideration of the differences in the nationalities of the subjects, control baselines, fecal storage, digestive tract problems, and the detection methods used. With FMT, one can partly prove the primary function of gut <italic>Roseburia</italic>. However, interactions between bacteria and neurons are more complex than are other interactions such as bacteria&#x2013;epithelium or bacteria&#x2013;immunity; mechanism studies are lacking. The advancement in the culture techniques of the human microbiota and culturomics has provided a platform to elucidate and uncover new details on the explicit role of <italic>Roseburia</italic> in neural disorders.</p>
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<title>Circulation and Hematology</title>
<p>Metabolites derived from <italic>R. intestinalis</italic> can infiltrate the gut barrier and circulate in the artery and the vein. As such, it is imperative to investigate the effects of <italic>R. intestinalis</italic> in circulatory diseases (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>). A classic role of <italic>Roseburia</italic> has been proven strongly in the modulation of atherogenesis. In a Swedish study, patients with symptomatic atherosclerosis had less abundant <italic>Roseburia</italic> than did healthy subjects (<xref ref-type="bibr" rid="B39">Karlsson et&#xa0;al., 2012</xref>). Moreover, gut metagenomes are enriched in genes encoding metabolic pathways forming atherosclerotic plaques. Kasahara et&#xa0;al. revealed a negative correlation of <italic>Roseburia</italic> spp. with the development of atherosclerotic plaques in a mouse model. The study established a murine model colonized with <italic>R. intestinalis</italic> and fed the transplanted gnotobiotic mice with a high concentration of plant polysaccharides (<xref ref-type="bibr" rid="B40">Kasahara et&#xa0;al., 2018</xref>). The results showed that <italic>R. intestinalis</italic> contributed to the reprogramming of metabolism from glycolysis to fatty acid utilization and the reduction of systemic inflammation. In addition, <italic>R. intestinalis</italic> inhibited atherosclerotic plaque formation and ameliorated atherosclerosis (<xref ref-type="bibr" rid="B40">Kasahara et&#xa0;al., 2018</xref>). A similar phenomenon had been observed in coronary artery disease (CAD) reported by two published large-scale population-based studies by Liu et&#xa0;al., who recruited 161 CAD patients and 40 healthy controls, and Zhu et&#xa0;al., who enrolled 70 CAD patients and 98 healthy controls. These two studies characterized bacterial co-abundance group changes at different disease stages and demonstrated a significant depletion of <italic>Roseburia</italic> in the CAD group (<xref ref-type="bibr" rid="B52">Liu et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B107">Zhu, Q. et&#xa0;al., 2018</xref>). In another research group, MGWAS analysis showed a lower abundance of <italic>Roseburia</italic> spp. in hypertension patients than in healthy controls (<xref ref-type="bibr" rid="B100">Yan et&#xa0;al., 2017</xref>). A related animal study also reported reduced <italic>Roseburia</italic> abundance in a two-kidney-one-clip (2K1C) hypertensive rat model (<xref ref-type="bibr" rid="B72">Qin et&#xa0;al., 2018</xref>). Furthermore, Zheng et&#xa0;al. demonstrated a disrupted abundance of bacteria, including <italic>Roseburia</italic>, in experimental rats from a 4-week heart failure rat model (<xref ref-type="bibr" rid="B103">Zheng et&#xa0;al., 2019</xref>). Collectively, these findings suggest a close correlation of the diseases of the circulatory system with <italic>Roseburia</italic>.</p>
<p>Regarding hematology, studies on disease microbiome are scanty. In one of the investigations, decreased <italic>Roseburia</italic> abundance was detected in the fecal samples of lymphoblastic leukemia patients (<xref ref-type="bibr" rid="B74">Rajagopala et&#xa0;al., 2016</xref>). Another study revealed that mice fed with pectic oligosaccharides had increased intestinal <italic>Roseburia</italic> spp., and the diet ameliorated leukemia progression in a leukemia mouse model (<xref ref-type="bibr" rid="B6">Bindels et&#xa0;al., 2015</xref>). These findings may unravel the role of <italic>Roseburia</italic> in leukemia. Moreover, studies conducted in Peru and Switzerland reported that iron-deficient anemia patients had a lower fecal <italic>Roseburia</italic> abundance than did the controls (<xref ref-type="bibr" rid="B15">Dostal et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B59">McClorry et&#xa0;al., 2018</xref>). These findings provide an insight into the interaction between hematology and microbiology. In this view, we believe that <italic>R. intestinalis</italic> sustains the stability of the gut ecology and provides persistent indirect benefits in circulation and hematology; the effect is slow, but persistent. It is undeniable that multiomics and single-cell sequencing technologies have greatly improved the breadth and depth of bacteria&#x2013;circulation research. These new technologies will guide the examination of circulation and the blood effects of germ-free animals after <italic>R. intestinalis</italic> intervention.</p>
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<title>Infection and Cancer</title>
<p>Microbiota-reactive CD4<sup>+</sup> T cells are essential in intestinal homeostasis because they produce permeability-sustaining cytokines and provide a large pool of T-cell alternatives that repel pathogens (<xref ref-type="bibr" rid="B25">Hegazy et&#xa0;al., 2017</xref>). Human immunodeficiency virus (HIV) impacts vast global populations, posing heavy public burdens and life-threatening risks. Evidence shows that HIV attacks the immune system (including the enteric defending barrier) whereby it infects and depletes CD4<sup>+</sup> T cells. The consequently low CD4<sup>+</sup> T cells induce gut dysbiosis, systemic inflammation, and clinical complications in chronic HIV patients. Researchers have detected low <italic>R. intestinalis</italic> abundance in the colonic mucosa of HIV patients compared to that in uninfected patients. In a recent investigation, the abundance of <italic>R. intestinalis</italic> was found to be inversely correlated with bacterial translocation, immune activation, and vascular inflammation (<xref ref-type="bibr" rid="B14">Dillon et&#xa0;al., 2017</xref>). Of note is that data from rectal mucosal microbiota rather than feces indicated depleted <italic>Roseburia</italic> in HIV patients who did not receive antiretroviral therapy (<xref ref-type="bibr" rid="B33">McHardy et&#xa0;al., 2013</xref>). However, the mechanism of dysbiosis induced by low CD4<sup>+</sup> T cells is complex. In feces of HIV patients, low microbial gene counts (LGCs) but enrichment in <italic>R. intestinalis</italic> correlated with low nadir CD4<sup>+</sup> T-cell counts, which could predict gut dysbiosis in HIV (<xref ref-type="bibr" rid="B24">Guillen et&#xa0;al., 2019</xref>). In addition, a significantly enriched <italic>Roseburia</italic> abundance was reported in active tuberculosis (TB) patients, and <italic>Roseburia</italic> promoted TB pathophysiology by enhancing the anti-inflammatory milieu in the host (<xref ref-type="bibr" rid="B56">Maji et&#xa0;al., 2018</xref>). However, a contrary report of a Chinese trial confirmed a decrease in <italic>Roseburia</italic> abundance in TB patients (<xref ref-type="bibr" rid="B31">Hu et&#xa0;al., 2019</xref>). Therefore, further investigation is warranted to address these divergent results.</p>
<p>The cancer-associated microbiome has always been a preference in cancer research. It is worth noting that the microbiota contributes to carcinogenesis and tumor progression in colorectal cancer (CRC), hepatocellular carcinoma, pancreatic tumor, and cervical cancer. Therefore, the microbiota can serve as early diagnostic biomarkers to guide precise cancer treatment. A previous investigation by <xref ref-type="bibr" rid="B51">Liang et&#xa0;al. (2017)</xref> reported that <italic>R. intestinalis</italic> abundance was decreased in CRC patients compared to healthy controls. Notably, the change in <italic>R. intestinalis</italic> abundance is consistently significant among cancer-associated microbiome studies. In a study by Yu et&#xa0;al. using MGWAS, the abundances of some marked microbes, including <italic>R. intestinalis</italic>, were decreased in 74 Chinese patients with CRC compared to the controls. These results were consistent with validated data from cohorts in Denmark, France, and Austria (<xref ref-type="bibr" rid="B102">Yu et&#xa0;al., 2017</xref>). Similar findings were also documented in independent studies (<xref ref-type="bibr" rid="B93">Wang et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B10">Chen et&#xa0;al., 2013</xref>). After a careful evaluation of the literature reports on CRC microbiota based on their large size and consistent results, we provide evidence that <italic>R. intestinalis</italic> may be a definite protective factor and a reliable biomarker in CRC. However, for other cancers (nasopharyngeal carcinoma and cervical cancer), divergent results were found (<xref ref-type="bibr" rid="B35">Jiang et&#xa0;al., 2019</xref>; <xref ref-type="bibr" rid="B94">Wang et&#xa0;al., 2019</xref>). It is notable that both studies displayed connections between <italic>Roseburia</italic> abundance and cancer risk, although the results were not related to the beneficial effect of <italic>Roseburia</italic>. Generally, cancer-associated microbiota is relevant to the cancer microenvironment. <italic>R. intestinalis</italic> may contribute to the dysfunction of the immune microenvironment and metabolic reprogramming of cancer cells. Recent evidence demonstrated an association of the Clostridiales members of the gut microbiota with a lower tumor burden in mouse models of CRC. Notably, these commensal species, including <italic>R. intestinalis</italic>, were also significantly reduced in CRC patients compared to healthy controls (<xref ref-type="bibr" rid="B64">Montalban-Arques et&#xa0;al., 2021</xref>). A mix of four Clostridiales strains (CC4) in mice prevented and successfully cured CRC as a stand-alone treatment in anti-PD-1 therapy. Also, the bacterial treatment induced a high infiltration of CD8<sup>+</sup> T cells within the tumor, making them more immunogenic (<xref ref-type="bibr" rid="B64">Montalban-Arques et&#xa0;al., 2021</xref>). A single application of <italic>R. intestinalis</italic> showed higher efficacy than that of CC4 (<xref ref-type="bibr" rid="B64">Montalban-Arques et&#xa0;al., 2021</xref>). This section has shown a potential synergy between tumor immunotherapy and microbes. Thus, further cancer-associated microbial studies are warranted to elucidate the role of <italic>R. intestinalis</italic> in tumor immunotherapy. Although metagenome results could not distinguish the above role, germ-free animals and primary bacterial culture of tumors have great application prospects.</p>
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<sec id="s8">
<title>Respiratory, Nephrology, and Others</title>
<p>Acute respiratory distress syndrome (ARDS) is an acute lung injury that occurs mostly following an infection, chemical airway burn, or other factors. ARDS is characterized by a disruption of the alveolar epithelial and endothelial barrier, inflammatory effusion, ventilation defect, and severe respiratory failure. Intestinal microbial dysbiosis may aggravate ARDS. A previous study conducted using an acute lung injury rat model (rats were intratracheally instilled with lipopolysaccharides) demonstrated a higher diversity index and a lower number of <italic>Roseburia</italic> spp. in the gut flora of model rats compared to that of the control group (<xref ref-type="bibr" rid="B50">Li et&#xa0;al., 2014</xref>).</p>
<p>In most cases, chronic kidney disease (CKD) is comorbid with metabolic and cardiovascular complications, and most patients can progress into end-stage renal disease. In addition, a deteriorated internal environment frequently accompanies an impaired gut barrier and low-grade inflammation. CKD patients have been shown to harbor shrunken percentages of beneficial microbes, including <italic>Roseburia</italic> (<xref ref-type="bibr" rid="B99">Xu et&#xa0;al., 2017</xref>). In another study, a reduced abundance of <italic>Roseburia</italic> was reported in the end-stage renal disease group and was negatively correlated with C-reactive protein and cystatin C (<xref ref-type="bibr" rid="B37">Jiang et&#xa0;al., 2017</xref>). Some studies have shown a negative correlation of <italic>Roseburia</italic> with CKD severity at different stages of the disease (<xref ref-type="bibr" rid="B95">Wu, I. W. et&#xa0;al., 2020</xref>), and related studies continue to emerge. This review has repeatedly confirmed the beneficial role of <italic>Roseburia</italic> in different diseases. However, the precise role of <italic>Roseburia</italic> spp. could hardly be defined because dysbiosis is expected in such diseases. Nevertheless, we are more convinced that <italic>Roseburia</italic> is a potential probiotic.</p>
</sec>
<sec id="s9">
<title>
<italic>R. intestinalis</italic> as a Probiotic Candidate: The Roads to Explore</title>
<p>Many clinical studies of human cohorts using established disease models have documented the protective role of <italic>Roseburia</italic> spp., especially <italic>R. intestinalis</italic>. Nearly all the data demonstrate a probiotic role of <italic>R. intestinalis</italic> in preventing infection and in relieving and reversing the pathological process. Notably, <italic>R. intestinalis</italic> has displayed a beneficial role in different modes, such as butyrate, supernatant, flagellin, and organism effect. In combination with other emerging evidence, findings from our research group have revealed the effect of <italic>R. intestinalis</italic> on Tregs, ILC3, Th17, and macrophages and the stimulation of anti-inflammatory cytokines (IL-22, IL-17, IFN&#x3b3;, TSLP, and OSM). There is evidence that different technologies have been applied to modulate <italic>R. intestinalis</italic>-associated disease treatment (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>), and the significance of FMT as a microbial treatment choice in diseases is well highlighted. For example, <italic>Clostridium difficile</italic> colitis is associated with microbiota dysbiosis caused by the overuse of antibiotics. FMT, as standard therapy, reverses microbiota dysbiosis and maintains the natural microbiota. FMT also demonstrates favorable potential in managing chronic inflammatory disorders, including UC. A randomized, double-blinded controlled trial, for instance, demonstrated that the application of FMT to manage active UC patients improved the microbial diversity and altered the bacterial taxa. Furthermore, patients in the remission group displayed more abundant <italic>Roseburia</italic> spp. and higher SCFA levels than those who experienced no remission after FMT (<xref ref-type="bibr" rid="B67">Paramsothy et&#xa0;al., 2019</xref>). Another investigation proposed that <italic>Roseburia</italic> species could be the prominent candidates for the probiotic treatment of patients with IBD based on the consistent results in the experimental center (<xref ref-type="bibr" rid="B41">Kellermayer, 2019</xref>). In our previous study (<xref ref-type="bibr" rid="B101">Yang et&#xa0;al., 2020</xref>), CD patients who received FMT showed significant improvement in the number of operational taxonomic units (OTUs) and Shannon diversity index than did donors, 2 weeks after FMT, which included <italic>R. intestinalis</italic>. Collectively, <italic>R. intestinalis</italic> might play a beneficial role in the recovery of the gut microenvironment and the improvement of disease pathophysiology through FMT.</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Different therapeutic methods targeting <italic>Roseburia intestinalis</italic> in potential diseases. <italic>IBD</italic>, inflammatory bowel disease; <italic>MDD</italic>, major depressive disorder; <italic>PD</italic>, Parkinson&#x2019;s disease; <italic>AFLD</italic>, alcoholic fatty liver disease.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-757718-g003.tif"/>
</fig>
<p>It is well known that the butyrate produced by <italic>R. intestinalis</italic> is a prebiotic. Researchers have attempted to directly or indirectly administer butyrate or butyrate &#x201c;carriers&#x201d; such as tributyrin (<xref ref-type="bibr" rid="B92">W&#xe4;chtersh&#xe4;user and Stein, 2000</xref>; <xref ref-type="bibr" rid="B89">Tuleu et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B60">McNabney and Henagan, 2017</xref>). For effective absorption, rectal butyrate enema had been previously introduced in UC treatment (<xref ref-type="bibr" rid="B30">Hove et&#xa0;al., 1995</xref>). Similarly, our research group revealed the therapeutic effect of <italic>R. intestinalis</italic> by suspension gavage in mice. In this view, we strongly suggest a need to develop viable probiotics based on <italic>R. intestinalis</italic> in medicine. Whole-grain diets with abundant fiber can also be fermented using <italic>R.&#xa0;intestinalis</italic>. Of note is that other special prebiotic supplements, such as acetate, xylan, &#x3b2;-mannans, and protein hREG3&#x3b1;, alter the abundance of <italic>R. intestinalis</italic> and butyrate production and promote niche superiority. As such, the application of <italic>R. intestinalis</italic> can benefit from advancement in the development of materials. Recently, in our laboratory, we developed a magnetic iron oxide nanoparticle (MION) internalized <italic>R.&#xa0;intestinalis</italic>, and the magnetic field can be directed both <italic>in vitro</italic> and <italic>in vivo</italic> (<xref ref-type="bibr" rid="B97">Xiao et&#xa0;al., 2019</xref>). Additionally, a careful investigation of the viability and cytotoxicity of MION internalized <italic>R. intestinalis</italic> and a custom-made magnetic guide facility were conducted <italic>in vitro</italic>. The results demonstrated good orienteering and the anti-inflammatory effect of MIONs in the TNBS-induced colitis mouse model (<xref ref-type="bibr" rid="B97">Xiao et&#xa0;al., 2019</xref>).</p>
<p>More findings from our laboratory indicated that the flagellin from <italic>R. intestinalis</italic> displayed a favorable anti-inflammatory effect <italic>via</italic> intraperitoneal injection (<xref ref-type="bibr" rid="B73">Quan et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B96">Wu, X. et&#xa0;al., 2020</xref>). These results strongly suggest that purified flagellin may be a safe and effective therapy for intestinal immune modulation. Furthermore, some tryptophan metabolites, including indoles, may be a new choice targeting <italic>R. intestinalis</italic>-associated mechanisms, for example, IL-22 production and ILC3 activation by the AhR. Therefore, further well-designed studies and credible clinical trials should be conducted to clarify the beneficial effects of <italic>R. intestinalis</italic>.</p>
<p>Regarding the safety of <italic>R. intestinalis</italic>, our laboratory is evaluating its risk in mouse symptoms, circulating system, and organs systemically. Further data will estimate its safety. Evidence should be accumulated in its safety and proper uptake dose. As a probiotic candidate, preclinical evaluation and clinical trials are urgently needed to prove its therapeutic potential in diseases.</p>
</sec>
<sec id="s10" sec-type="discussion">
<title>Discussion</title>
<p>In 2014, the International Scientific Association for Probiotics and Prebiotics consensus statement updated the scope and appropriate use of the term probiotic. The reinforced concept defines probiotics as live microorganisms that, when administered in adequate amounts, confer a health benefit to the host. The expert consensus listed several probiotic candidates, including <italic>A. muciniphila</italic>, <italic>F. prausnitzii</italic>, <italic>Roseburia</italic> spp., and <italic>Eubacterium hallii</italic> (<xref ref-type="bibr" rid="B27">Hill et&#xa0;al., 2014</xref>). It is expected that therapeutic approaches targeting <italic>R. intestinalis</italic> will significantly improve specific human pathogenic status. Notably, inflammatory bowel disease exhibits significant changes in the abundance of <italic>R. intestinalis</italic> and benefits the most from its modulations. Recent breakthroughs also suggest the probiotic role of <italic>R. intestinalis</italic>, which has a widespread effect in preventing intestinal inflammation and maintaining energy homeostasis based on its metabolites, and noumenon. <italic>R. intestinalis</italic> could impact the functions of immune cells and the release of cytokines through its metabolites, butyrate and flagellin, and other unknown supernatant components. Advancements in primary culture technology, culture omics, single-cell sequencing, and metabonomics technology are expected to help researchers in elucidating the role of <italic>Roseburia</italic> spp. in order to lay a solid foundation in the maintenance of human health and treatment strategies for diseases in the future. Based on the available evidence, focused, well-designed randomized controlled trials, and future high-quality systematic reviews and meta-analyses should be urgently conducted to uncover the probiotic role of <italic>R. intestinalis</italic>. In conclusion, as a significant butyrate producer, <italic>R. intestinalis</italic>, which belongs to the <italic>Roseburia</italic> species, has great application prospects in the development of novel probiotics. It is possible that <italic>R. intestinalis</italic> can exert a specific and a significant therapeutic influence in different diseases associated with microbial dysbiosis.</p>
</sec>
<sec id="s11" sec-type="author-contributions">
<title>Author Contributions</title>
<p>KN reviewed all the literature and wrote the manuscript. KM, WL, ZS, ZY, TT, and XM undertook most of the group&#x2019;s research work and published their findings. They also discussed each part of the manuscript and helped form our viewpoints. YY funded us and edit the manuscript. XW conducted the research group including above authors and edited the manuscript. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="s12" sec-type="funding-information">
<title>Funding</title>
<p>This project was supported by the National Natural Science Foundation of China (NSFC nos. 81970494 and 81800500) 81970494 was grant to XW and 81800500 to YY.</p>
</sec>
<sec id="s13" sec-type="COI-statement">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s14" sec-type="disclaimer">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
<back>
<sec id="s15">
<title>Abbreviations</title>
<p>IBD, inflammatory bowel diseases; UC, ulcerative colitis; IBS, irritable bowel syndrome; GPCRs, G-protein coupled receptors; TSLP, thymic stromal lymphopoietin; GLP-1, glucagon-like peptide-1; PYY, peptide YY; OSM, oncostatin M; hREG3&#x3b1;, human regenerating family member 3 alpha; TLR5, Toll-like receptor 5; IDO1, indoleamine2,3-dioxygenase-1; HIF1A-AS2, lncRNA (HIF1A-AS2); FISH, fluorescence <italic>in situ</italic> hybridization; MGWAS, metagenome-wide association study; NAFLD, non-alcoholic fatty liver disease; AFLD, alcoholic fatty liver disease; CRD, chronic rheumatoid disease; APS, antiphospholipid syndrome; CAD, coronary artery disease; HIV, human immunodeficiency virus; CRC, colorectal cancer; ARDS, acute respiratory distress syndrome.</p>
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