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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Cell. Infect. Microbiol.</journal-id>
<journal-title>Frontiers in Cellular and Infection Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Cell. Infect. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">2235-2988</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fcimb.2021.639573</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Cellular and Infection Microbiology</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Rodent Models for the Study of Soil-Transmitted Helminths: A Proteomics Approach</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Monta&#xf1;o</surname>
<given-names>Karen J.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Cu&#xe9;llar</surname>
<given-names>Carmen</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Sotillo</surname>
<given-names>Javier</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1088368"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Centro Nacional de Microbiolog&#xed;a, Instituto de Salud Carlos III</institution>, <addr-line> Madrid</addr-line>, <country>Spain</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Departamento de Microbiolog&#xed;a y Parasitolog&#xed;a, Facultad de Farmacia, Universidad Complutense</institution>, <addr-line> Madrid</addr-line>, <country>Spain</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Cinzia Cantacessi, University of Cambridge, United Kingdom</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Bin Zhan, Baylor College of Medicine, United States; Joseph F. Urban, Jr., United States Department of Agriculture, United States; John Pius Dalton, National University of Ireland Galway, Ireland</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Javier Sotillo, <email xlink:href="mailto:javier.sotillo@isciii.es">javier.sotillo@isciii.es</email>
</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Parasite and Host, a section of the journal Frontiers in Cellular and Infection Microbiology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>22</day>
<month>04</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>11</volume>
<elocation-id>639573</elocation-id>
<history>
<date date-type="received">
<day>09</day>
<month>12</month>
<year>2020</year>
</date>
<date date-type="accepted">
<day>29</day>
<month>03</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Monta&#xf1;o, Cu&#xe9;llar and Sotillo</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Monta&#xf1;o, Cu&#xe9;llar and Sotillo</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Soil-transmitted helminths (STH) affect hundreds of millions worldwide and are some of the most important neglected tropical diseases in terms of morbidity. Due to the difficulty in studying STH human infections, rodent models have become increasingly used, mainly because of their similarities in life cycle. <italic>Ascaris suum</italic> and <italic>Trichuris muris</italic> have been proven appropriate and low maintenance models for the study of ascariasis and trichuriasis. In the case of hookworms, despite most of the murine models do not fully reproduce the life cycle of <italic>Necator americanus</italic>, their proteomic similarity makes them highly suitable for the development of novel vaccine candidates and for the study of hookworm biological features. Furthermore, these models have been helpful in elucidating some basic aspects of our immune system, and are currently being used by numerous researchers to develop novel molecules with immunomodulatory proteins. Herein we review the similarities in the proteomic composition between <italic>Nippostrongylus brasiliensis</italic>, <italic>Heligmosomoides polygyrus bakeri</italic> and <italic>Trichuris muris</italic> and their respective human counterpart with a focus on the vaccine candidates and immunomodulatory proteins being currently studied.</p>
</abstract>
<kwd-group>
<kwd>proteomics</kwd>
<kwd>soil-transmitted helminths (STHs)</kwd>
<kwd>host-parasite interactions</kwd>
<kwd>
<italic>Nippostrongylus brasiliensis</italic>
</kwd>
<kwd>
<italic>Heligmosomoides polygyrus</italic>
</kwd>
<kwd>
<italic>Trichuris muris</italic>
</kwd>
<kwd>vaccines</kwd>
<kwd>immunomodulation</kwd>
</kwd-group>
<contract-sponsor id="cn001">Instituto de Salud Carlos III<named-content content-type="fundref-id">10.13039/501100004587</named-content>
</contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="111"/>
<page-count count="12"/>
<word-count count="5956"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>Infection by soil-transmitted helminths (STHs), some of the most common neglected tropical parasites in the world, affects mainly low and middle-income countries (<xref ref-type="bibr" rid="B12">Brooker, 2010</xref>). Indeed, it is considered that, globally, nearly 2 billion people are infected with STHs (<xref ref-type="bibr" rid="B12">Brooker, 2010</xref>; <xref ref-type="bibr" rid="B104">World Health Organization, 2012</xref>), and hookworm infection alone results in &gt;4 million disability-adjusted life years lost annually (DALYs), as well as in significant economic losses (<xref ref-type="bibr" rid="B7">Bartsch et&#xa0;al., 2016</xref>). <italic>Ascaris lumbricoides</italic>, <italic>Trichuris trichiura</italic>, and hookworm (mainly <italic>Necator americanus</italic> and <italic>Ancylostoma duodenale</italic>) are the most common species that infect humans (<xref ref-type="bibr" rid="B56">Jourdan et&#xa0;al., 2018</xref>). Although competent health care and wide use of available anthelmintic drugs are currently the main approaches for the elimination of most helminth infections, their efficacy varies and chemotherapy does not prevent reinfection (<xref ref-type="bibr" rid="B62">Loukas et&#xa0;al., 2016</xref>); thus, it becomes necessary to continue our efforts to improve our understanding of these parasitic diseases. Due to the limited availability and difficulty in obtaining parasite material, researchers have widely used different animal models that share similarities in the life cycle, immune response elicited or both with their human counterpart (<xref ref-type="bibr" rid="B78">Scott and Tanguay, 1994</xref>; <xref ref-type="bibr" rid="B17">Camberis et&#xa0;al., 2003</xref>). In this regard, rodent models are, by far, the most popular and frequently used animal models and have been helpful in characterizing many aspects of human helminth infection.</p>
<p>
<italic>N. americanus</italic>, one of the most important STHs in terms of morbidity, can survive for decades in the small intestine of their human hosts (<xref ref-type="bibr" rid="B62">Loukas et&#xa0;al., 2016</xref>). While <italic>N. americanus</italic> is notably common in most of Africa, southern China, Southeast Asia and the Americas, <italic>A. duodenale</italic> is endemic in northern regions of India and China, in the Mediterranean region and in North Africa. Furthermore, in some parts of Africa, China and India, it is not unusual to observe mixed human infections with <italic>N. americanus</italic> and <italic>A. duodenale</italic> (<xref ref-type="bibr" rid="B70">Pullan et&#xa0;al., 2014</xref>). The life cycle of this group of nematodes is very complex, and involves free-living and parasitic stages as well as an intraorganic migration in the definitive host. Hookworm eggs hatch in soil and released rhabditiform larvae moult twice before becoming filariform and infective (iL3). iL3s penetrate the skin of the host and are carried through the bloodstream first to the heart and then to lungs. Following exit from the alveolar capillaries, iL3s ascend the bronchial tree to reach the pharynx and are swallowed. Finally, hookworms complete their migration to the small bowel, typically the distal jejunum, where immature L5 hookworms attach themselves in position to feed and avoid ejection by gut peristalsis (<xref ref-type="bibr" rid="B62">Loukas et&#xa0;al., 2016</xref>).</p>
<p>Interestingly, a hamster model susceptible to <italic>N. americanus</italic> is&#xa0;available; however, although adult worms can fully develop&#xa0;without the requirement of corticosteroids, this model&#xa0;was developed after decades of passaging through immunosuppressed hamsters (<xref ref-type="bibr" rid="B54">Jian et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B105">Xiao et&#xa0;al., 2008</xref>), and the extent of adaptation and genomic and proteomic differences with worms obtained from the human host is yet to be determined. Indeed, worms obtained from hamsters are smaller in size, less fertile and infections do not last longer than a few months (<xref ref-type="bibr" rid="B54">Jian et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B105">Xiao et&#xa0;al., 2008</xref>), although they do elicit a protective immunity similar to that observed in the related canine hookworm species <italic>Ancylostoma caninum</italic>. This model has also proved useful for the screening of vaccine candidates and the assessment of antihelminthic drugs (<xref ref-type="bibr" rid="B107">Xue et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B105">Xiao et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B108">Xue et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B110">Zhan et&#xa0;al., 2010</xref>), however, the impossibility to use hamsters in some countries (e.g. Australia) and the low availability of molecular biology reagents for hamsters can make it challenging to work with.</p>
<p>Because of this, different animal models have been used to study hookworm-host interactions, including the related ancylostomatids <italic>A. caninum</italic> in dogs (<xref ref-type="bibr" rid="B81">Shepherd et&#xa0;al., 2018</xref>) and <italic>A. ceylanicum</italic> in hamsters (<xref ref-type="bibr" rid="B3">Alkazmi and Behnke, 2010</xref>; <xref ref-type="bibr" rid="B91">Traub, 2013</xref>), as well as the murine nematodes <italic>Nippostrongylus brasiliensis</italic> and <italic>Heligmosomoides polygyrus bakeri</italic> (both belonging to the Trichostrongyloidea superfamily), all part of the clade V of nematodes. This clade contains members of the suborder Rhabditina with nematodes from the Strongylida and other orders (<xref ref-type="bibr" rid="B8">Blaxter et&#xa0;al., 1998</xref>). <italic>A. ceylanicum</italic> infection is a zoonotic disease, and can produce symptomatic infections in humans (<xref ref-type="bibr" rid="B62">Loukas et&#xa0;al., 2016</xref>). It can also infect hamsters, where it develops patent infections (<xref ref-type="bibr" rid="B3">Alkazmi and Behnke, 2010</xref>), and can elicit acquired immunity, making it a suitable model for the study of hookworm infections (<xref ref-type="bibr" rid="B62">Loukas et&#xa0;al., 2016</xref>) with the same limitations listed above.</p>
<p>
<italic>N. brasiliensis</italic>, a rodent strongyle nematode widely used by parasitologists, has a similar life cycle to <italic>N. americanus</italic>, including skin penetration, migration through the lungs and establishment in the small intestine of its host, although it is rapidly eliminated and does not recapitulate the long-lasting infections found with <italic>N. americanus</italic> (<xref ref-type="bibr" rid="B17">Camberis et&#xa0;al., 2003</xref>). Furthermore, <italic>N. brasiliensis</italic> induces a Th2 type immune response that manifests all the characteristics of a human hookworm infection, including IgE production and eosinophilia, which drive pathology in some allergic diseases (<xref ref-type="bibr" rid="B66">Nair and Herbert, 2016</xref>), as well as mastocytosis and mucus production (<xref ref-type="bibr" rid="B17">Camberis et&#xa0;al., 2003</xref>). Researchers have taken advantage of the similar life cycle and immunological responses between <italic>N. brasiliensis</italic> and <italic>N. americanus</italic> to conduct immunological studies (both systemic and mucosal) aimed at studying the mechanisms involved in human hookworm infections (<xref ref-type="bibr" rid="B66">Nair and Herbert, 2016</xref>).</p>
<p>Despite <italic>H. polygyrus bakeri</italic> does not infect through the skin or migrate through the lungs (as it depends on oral ingestion of infective larvae), it has been extensively employed as a model for human hookworm infections. Indeed, similarly to hookworms, <italic>H. polygyrus bakeri</italic> induces chronic intestinal infections in several mice strains, and the modified Th2 cell responses induced by infection (a Th2-like response linked with the production of anti-inflammatory cytokines and Treg activity) does not completely eliminate the parasites (<xref ref-type="bibr" rid="B101">Wells and Behnke, 1988</xref>; <xref ref-type="bibr" rid="B64">Maizels, 2005</xref>; <xref ref-type="bibr" rid="B16">Bungiro et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B71">Reynolds et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B66">Nair and Herbert, 2016</xref>). Furthermore, the study of <italic>H. polygyrus bakeri</italic> and <italic>N. brasiliensis</italic> infection in rodents has provided the immunology community with important information about the humoral and cellular mechanisms involved in the induction and development of Th2 immune responses and their capacity in protecting against helminth infections (<xref ref-type="bibr" rid="B68">Ogilvie and Jones, 1971</xref>; <xref ref-type="bibr" rid="B50">Ishizaka et&#xa0;al., 1976</xref>; <xref ref-type="bibr" rid="B97">Urban et&#xa0;al., 1991</xref>; <xref ref-type="bibr" rid="B17">Camberis et&#xa0;al., 2003</xref>).</p>
<p>In addition to hookworms, infection with whipworms (mainly <italic>T. trichiura</italic>) largely contributes to the pathological burden caused by STHs. More than 70 species of <italic>Trichuris</italic> (including worms of veterinary, scientific and human interest) have been described so far (<xref ref-type="bibr" rid="B48">Hurst and Else, 2013</xref>). All these species were classified within clade I, which groups vertebrate-parasites from the order Trichocephalida together with insect and plant-parasitic nematodes (<xref ref-type="bibr" rid="B8">Blaxter et&#xa0;al., 1998</xref>). Due to the difficulty in obtaining live worms from infected people and the impossibility of maintaining <italic>T. trichiura</italic> in the laboratory, <italic>Trichuris muris</italic> has become a widely used laboratory model being physiologically, morphologically, and antigenically similar to the human whipworm species (<xref ref-type="bibr" rid="B40">Grencis, 1993</xref>; <xref ref-type="bibr" rid="B30">Dixon et&#xa0;al., 2008</xref>). Indeed, the <italic>T. muris</italic> model has allowed researchers to understand relevant features concerning immunity to gut-dwelling nematode parasites as well as to gain a better knowledge of the immune system (<xref ref-type="bibr" rid="B48">Hurst and Else, 2013</xref>). Furthermore, the knowledge attained from this animal model has been applied to better understand human Trichuriasis (<xref ref-type="bibr" rid="B35">Faulkner et&#xa0;al., 2002</xref>) and other intestinal helminth infections (<xref ref-type="bibr" rid="B96">Turner et&#xa0;al., 2003</xref>).</p>
<p>Ascariasis, mainly caused by <italic>A. lumbricoides</italic>, affects over 800 million people worldwide (<xref ref-type="bibr" rid="B70">Pullan et&#xa0;al., 2014</xref>). Similarly to what occurs with other STHs, it is highly challenging to obtain adult worms, and model organisms have been developed (<xref ref-type="bibr" rid="B45">Holland, 2013</xref>). The related species <italic>A. suum</italic> is a natural parasite of pigs; however this animal model has not been widely used because of its cost, large size and difficult husbandry (<xref ref-type="bibr" rid="B45">Holland, 2013</xref>). This species was found to be able to infect mice and to follow a similar infection behaviour as the one observed in its natural hosts (<xref ref-type="bibr" rid="B82">Slotved et&#xa0;al., 1998</xref>), and further research identified mouse strains with different compatibility (e.g. the susceptible C57BL/6 and the resistant CBA/Ca strains), providing a convenient model to investigate the basis of Ascaris biology and for the development of vaccine candidates (<xref ref-type="bibr" rid="B58">Lewis et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B27">Deslyper et&#xa0;al., 2019</xref>).</p>
<p>Despite the significant advantages of murine models in terms of reproductive capacity, handling, and costs, there are other models used for the study of helminth infections such as the pig whipworm <italic>Trichuris suis</italic>, which pathophysiology is very similar to that occurring in human infections (<xref ref-type="bibr" rid="B26">Dawson et&#xa0;al., 2020</xref>) or, as mentioned above, the dog hookworm <italic>A. caninum</italic> (<xref ref-type="bibr" rid="B81">Shepherd et&#xa0;al., 2018</xref>). Nevertheless, due to ethical considerations, complex logistics and cost, pig and dog models are less used in parasitological research and will not be the scope of this review.</p>
<p>The need to develop novel and effective treatments against STH is indisputable, and rodent models can provide important information. Understanding, not only the immunological, physiological, anatomical and metabolic similarities that each model has, but also the proteomic and genomic similarities between all species is key for the design of appropriate control approaches. In this review, we compare the available proteomic data between STH of human importance and their murine model counterparts with a focus on the characterization of vaccine candidates and immunomodulatory molecules. This analysis provides the first step towards a rational selection of the most appropriate model for the analysis of a particular protein candidate; however, ideally, a combined approach integrating different transcriptomic, proteomic, lipidomic and metabolomic information will provide a more comprehensive picture of the suitability of a particular model.</p>
</sec>
<sec id="s2">
<title>Genomic and Proteomic Information From Animal Models</title>
<p>During the last decades, one of the major caveats in the study of host-hookworms interactions has been the lack of comprehensive and thoroughly annotated genomic and proteomic databases. However, in the recent years, the development of novel sequencing platforms and more sensitive mass spectrometers, as well as different initiatives (i.e., 50 helminth genomes project; <uri xlink:href="https://www.sanger.ac.uk/science/collaboration/50hgp">https://www.sanger.ac.uk/science/collaboration/50hgp</uri>) have provided useful information (<xref ref-type="bibr" rid="B86">Sotillo et&#xa0;al., 2017</xref>). In the case of <italic>N. americanus</italic>, the first draft genome was published in 2014 (<xref ref-type="bibr" rid="B88">Tang et&#xa0;al., 2014</xref>), and a more comprehensive genome version annotated using proteomic and transcriptomic data has recently been published (<xref ref-type="bibr" rid="B61">Logan et&#xa0;al., 2020</xref>). Similarly, the genomes and transcriptomes for the whipworms <italic>T. trichiura</italic> and <italic>T. muris</italic> were published in 2014 (<xref ref-type="bibr" rid="B37">Foth et&#xa0;al., 2014</xref>). In the case of <italic>A. lumbricoide</italic>s, the Parasite Genomics group at the Wellcome Trust Sanger Institute performed genome predictions as part of the 50 helminth genomes project (<xref ref-type="bibr" rid="B49">International Helminth Genomes Consortium, 2019</xref>).</p>
<p>A similarity analysis between the predicted proteome from <italic>N. americanus</italic> and other nematodes from the Ancylostomatidae family as well as hookworm models and other nematodes (all data downloaded from ParasiteWormBase v.14.0) shows that <italic>A. caninum</italic>, <italic>A. duodenale</italic> and <italic>A. ceylanicum</italic> proteins are, in general, more similar to <italic>N. americanus</italic> proteome (<xref ref-type="fig" rid="f1">
<bold>Figure 1</bold>
</xref>). This analysis also showed that despite <italic>N. brasiliensis</italic> and <italic>H. polygyrus bakeri</italic> do not belong to the Ancylostomatidae family and are, thus, less related to hookworm, they share a high degree of similarity (&gt;65%) in their proteome with <italic>N. americanus</italic> (<xref ref-type="fig" rid="f1">
<bold>Figure 1</bold>
</xref>), compared to other nematodes. Despite the limitations of analysing the proteins only at the amino acid level, it is well accepted that proteins sharing over 40% (60% in the case of enzymes) sequence identity might share similar functions (<xref ref-type="bibr" rid="B74">Rost, 1999</xref>; <xref ref-type="bibr" rid="B89">Tian and Skolnick, 2003</xref>).</p>
<fig id="f1" position="float">
<label>Figure 1</label>
<caption>
<p>Percentage identity of <italic>Necator americanus</italic> predicted proteome with the predicted proteins from different nematode species. The predicted proteome from different species of hookworm, hookworm mouse models and unrelated nematodes were compared against the predicted proteome from <italic>N. americanus</italic> and plotted in a heatmap. All predicted proteomes were downloaded from Parasite WormBase (v.14.0) and protein identity was calculated using Blast. Colour represents the number of proteins within a range of identity percentage.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-639573-g001.tif"/>
</fig>
<p>This is in agreement to what has been found recently, where <italic>N. americanus</italic> and hookworm animal models contained a similar number of predicted proteins encoded by their genomes, and proteins actively secreted by their adult stages presented a similar protein family profile (<xref ref-type="bibr" rid="B61">Logan et&#xa0;al., 2020</xref>). Indeed, from the 198 proteins secreted by <italic>N. americanus</italic> adult worms, 173 (&gt;87%) contained homologs in the secretomes from <italic>H. polygyrus bakeri</italic>, <italic>N. brasiliensis</italic> and <italic>A. caninum</italic> (<xref ref-type="bibr" rid="B61">Logan et&#xa0;al., 2020</xref>). One of the most represented families in the secretomes of these adult worm species is the sperm-coating protein (SCP)-like extracellular proteins, also called SCP/Tpx-1/Ag5/PR-1/Sc7 (SCP/TAPS; Pfam accession number no. PF00188). A total of 51 out of the 54 SCP/TAPS proteins found in the secretome of <italic>N.&#xa0;americanus</italic> had homologs in <italic>H. polygyrus bakeri</italic>, <italic>N.&#xa0;brasiliensis</italic> and <italic>A. caninum</italic>, which highlights the usefulness of using these murine models to study this particular family of proteins. Despite a phylogenetic analysis showed <italic>N. americanus</italic> SCP/TAPS proteins cluster more with <italic>A. caninum</italic> proteins than with <italic>N. brasiliensis</italic> or <italic>H. polygyrus bakeri</italic>, there are strong clade-specific similarities (<xref ref-type="bibr" rid="B61">Logan et&#xa0;al., 2020</xref>), and the high degree of diversity in the evolution of SCP/TAPS was speculated to be related to host-specific roles for this family of proteins (<xref ref-type="bibr" rid="B61">Logan et&#xa0;al., 2020</xref>).</p>
<p>Proteases (aspartyl-, cystein-, metallo- and serine-proteases) are also highly abundant in the secretome of <italic>N. americanus</italic> adult worms (<xref ref-type="bibr" rid="B61">Logan et&#xa0;al., 2020</xref>), as well as the murine models (<xref ref-type="bibr" rid="B44">Hewitson et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B85">Sotillo et&#xa0;al., 2014</xref>). A homology analysis showed that proteases secreted by <italic>N. americanus</italic> had, in general, a higher degree of homology to those from the <italic>H.&#xa0;polygyrus bakeri</italic> and <italic>N. brasiliensis</italic> rather than <italic>A. caninum</italic> (<xref ref-type="bibr" rid="B61">Logan et&#xa0;al., 2020</xref>), which would make these models highly suitable for the development of vaccine studies as discussed in the next section.</p>
<p>Foth et&#xa0;al. sequenced and assembled the genome from both <italic>T. trichiura</italic> and <italic>T. muris</italic>, and found that most Trichuris genes are orthologs shared by both species (<xref ref-type="bibr" rid="B37">Foth et&#xa0;al., 2014</xref>). Furthermore, predicted proteomes are highly similar, with over 5,000 proteins having an average homology of 79% and only 2,350 and 3,817 proteins specific from <italic>T. trichiura</italic> and <italic>T. muris</italic> respectively, which highlights the usefulness of the mouse model to study human whipworm infections (<xref ref-type="bibr" rid="B37">Foth et&#xa0;al., 2014</xref>). An analysis of the similarity between the <italic>T. trichiura</italic> predicted proteome and other trichurids (i.e. <italic>T. suis</italic> and <italic>T. muris</italic>) as well as unrelated nematodes (all data downloaded from ParasiteWormBase v.14.0) confirms that proteins from both the pig and mouse models are highly similar to the human whipworm, and could be useful for the study of whipworm infections (<xref ref-type="fig" rid="f2">
<bold>Figure 2</bold>
</xref>).</p>
<fig id="f2" position="float">
<label>Figure 2</label>
<caption>
<p>Percentage identity of <italic>Trichuris trichiura</italic> predicted proteome with the predicted proteins from different nematode species. The predicted proteome from different species of trichurids and unrelated nematodes were compared against the predicted proteome from <italic>T. trichiura</italic> and plotted in a heatmap. All predicted proteomes were downloaded from Parasite WormBase (v.14.0) and protein identity was calculated using Blast. Colour represents the number of proteins within a range of identity percentage.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-639573-g002.tif"/>
</fig>
<p>Only two studies have attempted to characterize the proteins secreted by <italic>T. muris</italic>, identifying 148 (<xref ref-type="bibr" rid="B34">Eichenberger et&#xa0;al., 2018b</xref>) and 73 (<xref ref-type="bibr" rid="B92">Tritten et&#xa0;al., 2017</xref>) proteins, while in the case of <italic>T. suis</italic> 328 proteins were identified (<xref ref-type="bibr" rid="B57">Leroux et&#xa0;al., 2018</xref>). The lower number of identified proteins in the mouse model in comparison with <italic>T. suis</italic> could be a reflection of the more stringent database search settings used. For instance, while Tritten et&#xa0;al. and Eichenberger et&#xa0;al. included databases from the parasite and the host (to eliminate host-associated proteins) and only proteins identified with two or more peptides were used for further analysis, Leroux et&#xa0;al. only used a parasite database (no contaminants were included in the search) and proteins identified with only one peptide were considered as valid identifications (<xref ref-type="bibr" rid="B92">Tritten et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B34">Eichenberger et&#xa0;al., 2018b</xref>; <xref ref-type="bibr" rid="B57">Leroux et&#xa0;al., 2018</xref>). It is noteworthy the low number of SCP/TAPS proteins identified in the <italic>T. muris</italic> secretome compared to parasites from clade V, which agrees with previous observations where this family of proteins is significantly expanded in clades IVa and V but not in clade I (<xref ref-type="bibr" rid="B102">Wilbers et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B49">International Helminth Genomes Consortium, 2019</xref>). To elucidate the degree of similarity between animal models and human whipworm infections, a comparative analysis of the secretomes from all three parasites would be of high interest, although the difficulty in obtaining viable worms from the human host makes this type of analysis currently very challenging.</p>
</sec>
<sec id="s3">
<title>Development of Vaccine Candidates in Murine Models</title>
<p>Since resistance to different antihelminthic drugs is being widely reported in human and animal nematodes, there is an urgent need for vaccines that could complement the current approach to helminth control. In this regard, the different rodent models used to study STHs could be of importance. Indeed, both hookworm hamster models (<italic>N. americanus</italic> and <italic>A. ceylanicum</italic>) have been used for the screening of vaccine candidates (<xref ref-type="bibr" rid="B38">Ghosh et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B16">Bungiro et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B110">Zhan et&#xa0;al., 2010</xref>), and <italic>A. ceylanicum</italic> has been proven a good model for selection of vaccine candidates using bioinformatic and functional approaches (<xref ref-type="bibr" rid="B100">Wei et&#xa0;al., 2016</xref>), providing important information for the development of these candidates.</p>
<p>Currently there are no licensed vaccines against human STH, and The Human Hookworm Vaccine initiative is, at present, the only vaccine for hookworm infection in clinical development. This vaccine contains two recombinant antigens, Na-GST-1 and Na-APR-1, both key enzymes involved in the capacity of hookworms to use host blood as source of nutrients (<xref ref-type="bibr" rid="B47">Hotez et&#xa0;al., 2013</xref>). Furthermore, challenge studies conducted in laboratory animals have shown the capacity of Na-GST-1 and Na-APR-1 to induce protective efficacy (<xref ref-type="bibr" rid="B46">Hotez et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B47">Hotez et&#xa0;al., 2013</xref>). Interestingly, both proteins have homologues in other hookworm and hookworm-like parasites, with the highest homology found with <italic>A. ceylanicum</italic>, <italic>A. caninum</italic> and <italic>A. duodenale</italic> (<xref ref-type="fig" rid="f3">
<bold>Figures 3</bold>
</xref> and <xref ref-type="fig" rid="f4">
<bold>4</bold>
</xref>) as expected due to closeness of species. Homology found with mice models such as <italic>H. polygyrus bakeri</italic> and <italic>N. brasiliensis</italic> was also high, particularly for Na-APR-1, with &gt;83% aminoacid identity in homologues from both parasites (<xref ref-type="fig" rid="f4">
<bold>Figure 4</bold>
</xref>). Interestingly, the percentage of identity found with <italic>Trichuris</italic> spp. was ~60% while it was ~80% for <italic>Ascaris</italic> spp., suggesting a key role of this enzyme in ascarids, most likely due to these parasites potentially being blood-feeders (<xref ref-type="bibr" rid="B90">Toh et&#xa0;al., 2010</xref>). This could be of interest when ranking and&#xa0;selecting potential candidates against Ascaris infection, and a modified Na-APR-1 could be incorporated into a pan-anthelminthic vaccine as discussed by other authors (<xref ref-type="bibr" rid="B111">Zhan&#xa0;et&#xa0;al., 2014</xref>). In the case of Na-GST-1, &gt;65% aminoacid identity was found in different homologues from both mice models (<xref ref-type="fig" rid="f3">
<bold>Figure 3</bold>
</xref>), while similarity with <italic>Ascaris</italic> spp. was ~50%, which hampers its use as a vaccine candidate in other nematodes as discussed below for Trichuris.</p>
<fig id="f3" position="float">
<label>Figure 3</label>
<caption>
<p>Similarity plot. Circos plot generated using Circoletto (Darzentas, 2010) showing the percentage of identity between Na-GST-1 and their homologues in different rodent model nematodes. Only homologues with e-values &lt; 1E-50 are shown. Protein names as per Parasite WormBase database (v.15) have been used for comparison. ALUE, <italic>Ascaris lumbricoides</italic>; AgR, <italic>Ascaris suum</italic>; ANCCAN, <italic>Ancylostoma caninum</italic>; Acey, <italic>Ancylostoma ceylanicum</italic>; ANCDUO, <italic>Ancylostoma duodenale</italic>; HPOL, <italic>Heligmosomoides polygyrus</italic>; NBR, <italic>Nippostrongylus brasiliensis</italic>; TMUE, <italic>Trichuris muris</italic>; TTRE, <italic>Trichuris trichiura</italic>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-639573-g003.tif"/>
</fig>
<fig id="f4" position="float">
<label>Figure 4</label>
<caption>
<p>Similarity plot. Circos plot generated using Circoletto (Darzentas, 2010) showing the percentage of identity between Na-APR-1 and their homologues in different rodent model nematodes. Only homologues with e-values &lt; 1E-50 are shown. Protein names as per Parasite WormBase database (v.15) have been used for comparison. ALUE, <italic>Ascaris lumbricoides</italic>; AgR, <italic>Ascaris suum</italic>; ANCCAN, <italic>Ancylostoma caninum</italic>; Acey, <italic>Ancylostoma ceylanicum</italic>; ANCDUO, <italic>Ancylostoma duodenale</italic>; HPOL, <italic>Heligmosomoides polygyrus</italic>; NBR, <italic>Nippostrongylus brasiliensis</italic>; TMUE, <italic>Trichuris muris</italic>; TTRE, <italic>Trichuris trichiura</italic>.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-639573-g004.tif"/>
</fig>
<p>The high similarity found between both vaccine candidates and their <italic>N. brasiliensis</italic> homologues has highlighted the conservation in the blood-feeding pathways with <italic>N.&#xa0;americanus</italic> (<xref ref-type="bibr" rid="B10">Bouchery et&#xa0;al., 2018</xref>). Indeed, vaccination with both hookworm vaccine candidates induced protection against <italic>N. brasiliensis</italic> in mice, which made authors suggest that <italic>N.&#xa0;brasiliensis</italic> is a suitable model for vaccine identification and drug screening against hookworms (<xref ref-type="bibr" rid="B10">Bouchery et&#xa0;al., 2018</xref>). On the other hand, the fact that <italic>H. polygyrus bakeri</italic> has homologues to these two proteins is intriguingly, since this parasite is believed to feed on epithelial cells and not on blood (<xref ref-type="bibr" rid="B5">Bansemir and Sukhdeo, 1994</xref>), and more experiments should be done to ascertain the role of Na-APR-1 and Na-GST-1 homologues in this hookworm-like model. Indeed, vaccination with GST in a mouse model did not confer protection against <italic>H. polygyrus bakeri</italic>, despite eliciting a significant humoral response (<xref ref-type="bibr" rid="B13">Brophy et&#xa0;al., 1994</xref>). Thus, it is tempting to speculate that GST might be a potential vaccine candidate only in blood-feeding nematodes, whereas in non-hematophagous nematodes, where this protein is suggested to play a role only as a defence mechanism against toxic substances (<xref ref-type="bibr" rid="B84">Smith, 1992</xref>), other candidates must be tested. As mentioned earlier, &gt;60% sequence identity between two proteins usually results in similar functions; however, performing functionality studies and integrating different <italic>omic</italic> technologies is essential to obtain a more holistic picture of the biological problem.</p>
<p>It is also worth highlighting that different studies using experimental infection with helminths show that GST influences the immune responses and cross-reactive allergy (<xref ref-type="bibr" rid="B65">Mitchell, 1989</xref>; <xref ref-type="bibr" rid="B84">Smith, 1992</xref>; <xref ref-type="bibr" rid="B14">Brophy et&#xa0;al., 1995</xref>; <xref ref-type="bibr" rid="B77">Santiago et&#xa0;al., 2012</xref>). Furthermore, helminth and cockroach GST cross-react because of their noteworthy molecular and structural similarities, which has led several authors to suggest that vaccine development should take into account the potential impact of cross-reactivity with common allergens (<xref ref-type="bibr" rid="B77">Santiago et&#xa0;al., 2012</xref>). In this regard, it is also necessary to consider the ability of vaccines to induce strong Th2 responses, remembering the case described by Diemert et&#xa0;al. (<xref ref-type="bibr" rid="B28">Diemert et&#xa0;al., 2012</xref>) where generalized urticarial reactions were developed in several volunteers after vaccination with a single dose of Na-ASP-2. These allergic reactions were linked to pre-existing Na-ASP-2-specific IgE probably induced by previous infection with <italic>N.&#xa0;americanus</italic> (<xref ref-type="bibr" rid="B28">Diemert et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B29">Diemert et&#xa0;al., 2018</xref>).</p>
<p>Different studies have used the <italic>N. brasiliensis</italic> rodent model to (i) discover new vaccine candidates that could be extrapolated to human hookworm infections and (ii) develop novel administration routes of known vaccine candidates to improve their immunogenicity and reduce undesirable effects. Indeed, since <italic>N. brasiliensis</italic> has a highly conserved orthologue of Na-APR-1 (<xref ref-type="bibr" rid="B6">Bartlett et&#xa0;al., 2020</xref>), Bartlet et&#xa0;al. designed a lipopeptide-based vaccine using a B cell epitope derived from Na-APR-1, attached to a T helper epitope and administered it orally. In this study, several lipidated peptides were obtained and tested for vaccine efficacy using the <italic>N. brasiliensis</italic> hookworm model (<xref ref-type="bibr" rid="B6">Bartlett et&#xa0;al., 2020</xref>).</p>
<p>In previous studies, other researchers assessed the use of <italic>N.&#xa0;brasiliensis</italic> as a suitable model for testing vaccine candidates&#xa0;for hookworm infections. Using recombinant acetylcholinesterase B (AChE &#x201c;B&#x201d;), the most abundant enzyme isoform secreted by <italic>N. brasiliensis</italic> adult worms (<xref ref-type="bibr" rid="B32">Edwards et&#xa0;al., 1971</xref>; <xref ref-type="bibr" rid="B20">Clare Blackburn and Selkirk, 1992</xref>), these authors reported a level of protection in AChE-vaccinated animals and concluded that AChE &#x201c;B&#x201d; could be considered as a suitable vaccine antigen, with intranasal delivery being the most effective (<xref ref-type="bibr" rid="B4">Ball et&#xa0;al., 2007</xref>). Furthermore, the activity of the recombinant enzyme and subtypes of AChE in the somatic extract of <italic>N. brasiliensis</italic> could be inhibited by serum antibody (<xref ref-type="bibr" rid="B4">Ball et&#xa0;al., 2007</xref>); however, despite the promising results, no further studies pursued the development of a vaccine using this recombinant protein.</p>
<p>Cystatins, a group of proteins with immunomodulatory properties secreted by helminths, are implicated in several biological and pathological processes such as antigen processing, protein catabolism, and inflammation (<xref ref-type="bibr" rid="B41">Hartmann et&#xa0;al., 1997</xref>). Furthermore, cystatins have been identified in numerous parasite species including <italic>N. brasiliensis</italic>, where mice immunized with recombinant nippocystatin became partially resistant to infection, suggesting that <italic>N. brasiliensis</italic> might evade the host defense system using this protease inhibitor (<xref ref-type="bibr" rid="B24">Dainichi et&#xa0;al., 2001</xref>), although no other studies have tried to develop this molecule into a vaccine candidate in <italic>N. brasiliensis</italic> or other hookworms.</p>
<p>Coakley et&#xa0;al. showed that extracellular vesicles (EVs) from <italic>H.&#xa0;polygyrus bakeri</italic> are internalized by macrophages and can suppress host macrophage activation and inhibit expression of the IL-33 receptor subunit ST2. Further, vaccination with EVs elicited a protective immunity against <italic>H. polygyrus bakeri</italic> challenge in mice, suggesting EVs might play an important role <italic>in vivo</italic> (<xref ref-type="bibr" rid="B21">Coakley et&#xa0;al., 2017</xref>). The similarity of the EV proteomes between <italic>H. polygyrus bakeri</italic> and <italic>N. americanus</italic> is yet to be determined since EVs from the human hookworm have not been characterized yet.</p>
<p>
<italic>T. muris</italic> is a well-established model for host immunity. Chronic infections using this model are obtained by a high-dose infection in the susceptible mouse strain AKR or by a low-dose infection in C57BL/6 mice. Furthermore, this model is widely used for assessing the efficacy and immunogenicity of vaccine antigen candidates against whipworm infections (<xref ref-type="bibr" rid="B9">Boes and Helwigh, 2000</xref>; <xref ref-type="bibr" rid="B48">Hurst and Else, 2013</xref>). Indeed, vaccination with <italic>T. muris</italic> ES products has been shown to elicit protective immunity in murine models (<xref ref-type="bibr" rid="B52">Jenkins and Wakelin, 1977</xref>; <xref ref-type="bibr" rid="B53">Jenkins and Wakelin, 1983</xref>; <xref ref-type="bibr" rid="B30">Dixon et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B31">Dixon et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B60">Liu et&#xa0;al., 2017</xref>). Furthermore, a recent study showed that immunisation with <italic>T. muris</italic> ES proteins stimulates long-lasting protection against a subsequent low dose infection, which naturally results in chronic infections (<xref ref-type="bibr" rid="B80">Shears et&#xa0;al., 2018</xref>). In this study, 11 potential immunogenic proteins were identified, including serpin, TCTP, GSCP and iPMG, all of which have direct homologues in <italic>T. trichiura</italic> (<xref ref-type="bibr" rid="B80">Shears et&#xa0;al., 2018</xref>) and could potentially be developed against the human whipworm. Despite these results constitute a great advance in the quest for a vaccine against <italic>T. trichiura</italic>, translation of these molecules into an effective treatment against the human whipworm will be challenging and further studies are needed.</p>
<p>Furthermore, several authors reported the identification of a whey acidic protein in the ES products from <italic>T. muris</italic>, <italic>Tm</italic>-WAP (r<italic>Tm</italic>-WAP49) (<xref ref-type="bibr" rid="B11">Briggs et&#xa0;al., 2018</xref>). In this study, the <italic>Tm</italic>-WAP protein was used to evaluate immunogenicity and protective efficacy in a <italic>T. muris</italic> infection mice model and determined that recombinant WAP protein (r<italic>Tm</italic>-WAP49) induces strong type 2 protective immunity (48% worm burden reduction). These authors also confirmed <italic>Tm</italic>-WAP is a potent immunodominant antigen abundantly secreted by <italic>T. muris</italic> adult worms and that recombinant <italic>Tm</italic>-WAP does not elicit antigen-specific IgE response. Furthermore, in this study the immunogenicity of the protein expressed with a Na-GST-1-tag (r<italic>Tm</italic>-WAP-F8+Na-GST-1) was shown to be protective (38% protection) in the susceptible AKR strain, although protection was related to the WAP fragment and not to the GST tag (<xref ref-type="bibr" rid="B11">Briggs et&#xa0;al., 2018</xref>), which could reflect the unessential requirement of blood in the parasite&#x2019;s feeding process and impact a potential pan-nematode vaccine using this enzyme as discussed above.</p>
<p>In the case of Ascaris, <italic>A. suum</italic> has been widely used to assess the protection efficacy of different recombinant proteins in a mouse model of infection, and at least 5 candidates have been characterized to date (i.e. As14,As16, As24, As37 and As-Enol-1), all of them having direct homologs in <italic>A. lumbricoides</italic> (reviewed in (<xref ref-type="bibr" rid="B111">Zhan et&#xa0;al., 2014</xref>). While As-Enol-1 was developed as a DNA vaccine, having 61% efficacy in terms of larval recovery (<xref ref-type="bibr" rid="B19">Chen et&#xa0;al., 2012</xref>), As14,As16, As24 and As37 were tested in recombinant form and elicited a significant protection against subsequent infection ranging from 58-69% (<xref ref-type="bibr" rid="B93">Tsuji et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B94">Tsuji et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B95">Tsuji et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B51">Islam et&#xa0;al., 2005</xref>). Despite As-GST-1 has been proposed as a potential candidate mainly due to its homology (&gt;50%) to Na-GST-1 at the aminoacid level (<xref ref-type="bibr" rid="B59">Liebau et&#xa0;al., 1997</xref>), its high allergenicity will have an important impact for the design on an anti-Ascaris vaccine (<xref ref-type="bibr" rid="B2">Acevedo et&#xa0;al., 2013</xref>). Importantly, since <italic>A. lumbricoides</italic> feeds on the host&#x2019;s luminal content and not on blood, we might also speculate that this protein will not be part of the blood-feeding detoxification pathway, which might hamper its use as a vaccine, similarly to what occurs in <italic>H.&#xa0;polygyrus bakeri</italic> as described above.</p>
</sec>
<sec id="s4">
<title>Using Murine Models for the Discovery of Novel Immunomodulators</title>
<p>Despite the significant harm caused by parasitic worms, numerous investigations have shown the faculty of helminths, and hookworms in particular, to modulate inflammation and their potential to treat inflammatory diseases (<xref ref-type="bibr" rid="B23">Croese, 2006</xref>; <xref ref-type="bibr" rid="B36">Feary et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B22">Croese et&#xa0;al., 2015</xref>). Indeed, different authors have suggested that allergies and autoimmune disorders are a consequence of our altered and reduced exposure to infectious antigens, including helminths (<xref ref-type="bibr" rid="B103">Wills-Karp et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B109">Yazdanbakhsh, 2002</xref>; <xref ref-type="bibr" rid="B73">Rook, 2005</xref>; <xref ref-type="bibr" rid="B63">Maizels and Nussey, 2013</xref>). Chronic hookworm infections are characterized by a robust and enduring Th2 cell response, and infected individuals do not show any signs of allergy and are, in fact, protected from developing allergies (<xref ref-type="bibr" rid="B79">Scrivener et&#xa0;al., 2001</xref>). In the case of hookworm models, rodents develop similar Th2 responses as observed in humans, and different studies have demonstrated the role of secreted proteins and other molecules in the immunomodulatory processes (<xref ref-type="bibr" rid="B43">Hewitson et&#xa0;al., 2009</xref>). Since the secretome of <italic>N. americanus</italic> was unknown until very recently (<xref ref-type="bibr" rid="B61">Logan et&#xa0;al., 2020</xref>), the scientific community has put the focus on the proteins secreted by the rodent hookworms and other STHs for their potential therapeutic action against allergies and possibly other inflammatory and autoimmune diseases (<xref ref-type="table" rid="T1">
<bold>Table 1</bold>
</xref>) (<xref ref-type="bibr" rid="B99">van Riet et&#xa0;al., 2007</xref>), including inflammatory bowel disease (IBD), type 1 diabetes, celiac disease and others (<xref ref-type="bibr" rid="B42">Helmby, 2015</xref>; <xref ref-type="bibr" rid="B83">Smallwood et&#xa0;al., 2017</xref>).</p>
<table-wrap id="T1" position="float">
<label>Table 1</label>
<caption>
<p>Immunomodulatory molecules expressed in the hookworm models <italic>Heligmosomoides polygyrus bakeri</italic> and <italic>Nippostrongylus brasiliensis</italic>.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="left">Molecule and description</th>
<th valign="top" align="center">Specie</th>
<th valign="top" align="center">Function</th>
<th valign="top" align="center">Reference</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Hp-TGM</td>
<td valign="top" align="left">
<italic>H. polygyrus bakeri</italic>
</td>
<td valign="top" align="left">Ligation of TGF-&#x3b2; receptor on T cells leading to induction of Treg cells</td>
<td valign="top" align="left"> (<xref ref-type="bibr" rid="B39">Grainger et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B55">Johnston et&#xa0;al., 2017</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">HpARI</td>
<td valign="top" align="left">
<italic>H. polygyrus bakeri</italic>
</td>
<td valign="top" align="left">Blocks human and mouse IL-33</td>
<td valign="top" align="left"> (<xref ref-type="bibr" rid="B69">Osbourn et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B18">Chauch&#xe9; et&#xa0;al., 2020</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">HpBARI</td>
<td valign="top" align="left">
<italic>H. polygyrus bakeri</italic>
</td>
<td valign="top" align="left">Blocks the receptor of IL-33</td>
<td valign="top" align="left"> (<xref ref-type="bibr" rid="B98">Vacca et&#xa0;al., 2020</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">HpBARI_Hom2</td>
<td valign="top" align="left">
<italic>H. polygyrus bakeri</italic>
</td>
<td valign="top" align="left">Blocks the receptor of IL-33</td>
<td valign="top" align="left"> (<xref ref-type="bibr" rid="B98">Vacca et&#xa0;al., 2020</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Calreticulin</td>
<td valign="top" align="left">
<italic>H. polygyrus bakeri</italic>
</td>
<td valign="top" align="left">Promotes Th2 cell-responses by interacting with scavenger receptor A</td>
<td valign="top" align="left"> (<xref ref-type="bibr" rid="B76">Rzepecka et&#xa0;al., 2009</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">EVs</td>
<td valign="top" align="left">
<italic>H. polygyrus bakeri</italic>
</td>
<td valign="top" align="left">Suppresses host macrophage activation and inhibits expression of the IL-33 receptor subunit ST2.</td>
<td valign="top" align="left"> (<xref ref-type="bibr" rid="B15">Buck et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B21">Coakley et&#xa0;al., 2017</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">EVs</td>
<td valign="top" align="left">
<italic>N. brasiliensis</italic>
</td>
<td valign="top" align="left">Suppresses inflammatory cytokines and increases expression of IL-10</td>
<td valign="top" align="left"> (<xref ref-type="bibr" rid="B33">Eichenberger et&#xa0;al., 2018a</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Cystatin (HpCPI)</td>
<td valign="top" align="left">
<italic>H. polygyrus bakeri</italic>
</td>
<td valign="top" align="left">Modulates differentiation and activation of BMDCs resulting in non-functional dendritic cells.</td>
<td valign="top" align="left"> (<xref ref-type="bibr" rid="B87">Sun et&#xa0;al., 2013</xref>)</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Hp-TGM, TGF-&#x3b2; mimic; HpARI, Alarmin release inhibitor; HpBARI, H. polygyrus Binds Alarmin Receptor and Inhibits; EVs, extracellular vesicles.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>Human trials using live hookworm infections have been and are currently in development, but present strong limitations and challenges such as cost, reproducibility and ethical issues. Consequently, animal models are invaluable research tools that might provide new knowledge about the individual molecules involved in the immunomodulatory processes. For instance, the 41 kDa neutrophil inhibitory factor (NIF) and the tissue inhibitors of metalloprotease Ac-TMP-2 (renamed as Ac-AIP-2) were characterised from <italic>A. caninum</italic> and have been shown to have important anti-inflammatory properties (<xref ref-type="bibr" rid="B105">Xu et al., 2000</xref>; <xref ref-type="bibr" rid="B67">Navarro et al., 2016</xref>). Similarly, a serine protease inhibitor from <italic>T. suis</italic> (TsCEI), as well as the proteins triosephosphate isomerase and nucleoside diphosphate kinase have been shown to have important immunomodulatory properties (<xref ref-type="bibr" rid="B72">Rhoads et al., 2000</xref>; <xref ref-type="bibr" rid="B57">Leroux et al., 2018</xref>). Other hookworm proteins and their immunomodulatory roles have been reviewed elsewhere (<xref ref-type="bibr" rid="B1">Abuzeid et al., 2020</xref>; <xref ref-type="bibr" rid="B75">Ryan et al., 2020</xref>).</p>
<p>The immunomodulatory role of <italic>H. polygyrus bakeri</italic> is indisputable. This role has been attributed, among others, to different secreted proteins, including three proteins that belong to the complement control protein (CCP) superfamily: Hp-TGM (<italic>H. polygyrus bakeri</italic> TGF-&#x3b2; mimic), HpARI (<italic>H. polygyrus bakeri</italic> Alarmin Release Inhibitor) and HpBARI (<italic>H. polygyrus bakeri</italic> Binds Alarmin Receptor and Inhibits). Hp-TGM has been shown to drive Treg production in mice and humans by binding to the mammalian TGF-&#x3b2; complex, despite it has no sequence homology to mammalian TGF-&#x3b2; (<xref ref-type="bibr" rid="B55">Johnston et&#xa0;al., 2017</xref>). Furthermore, treatment with rHp-TGM increased the number of Treg cells in draining lymph nodes at the site of graft transplant in mice, resulting in delayed allograft rejection (<xref ref-type="bibr" rid="B39">Grainger et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B55">Johnston et&#xa0;al., 2017</xref>). HpARI is a cytokine-binding protein that prevents alarmin release within necrotic cells by binding directly to IL-33 and nuclear DNA (<xref ref-type="bibr" rid="B69">Osbourn et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B18">Chauch&#xe9; et&#xa0;al., 2020</xref>). Indeed, intranasally-administered rHpARI suppressed eosinophil responses and ILC2s in the lungs of mice following the exposure to <italic>Alternaria</italic> allergen, while it increases worm burden and suppresses type 2 responses in <italic>N. brasiliensis</italic>-infected mice (<xref ref-type="bibr" rid="B69">Osbourn et&#xa0;al., 2017</xref>). It has also been shown that <italic>H. polygyrus bakeri</italic> can block the IL-33 pathway by blocking the cytokine and its receptor <italic>via</italic> both HpARI and HpBARI, respectively (<xref ref-type="bibr" rid="B98">Vacca et&#xa0;al., 2020</xref>). The same authors also identified a close homologue of HpBARI (HpBARI_Hom2), which binds and inhibits the human form of the IL-33 receptor (<xref ref-type="bibr" rid="B98">Vacca et&#xa0;al., 2020</xref>). These discoveries highlight a potential use for the referred proteins in a wide variety of inflammatory settings, particularly in asthma (<xref ref-type="bibr" rid="B18">Chauch&#xe9; et&#xa0;al., 2020</xref>).</p>
<p>It is also remarkable that calreticulin from <italic>H. polygyrus bakeri</italic> has been shown to promote Th2 cell-responses but no further studies have explored into the immunomodulatory effects of this molecule (<xref ref-type="bibr" rid="B76">Rzepecka et&#xa0;al., 2009</xref>).</p>
<p>Although cystatins have been used as vaccination targets, rHp-CPI from <italic>H. polygyrus bakeri</italic> is also capable to modulate the activation and differentiation of bone-marrow-derived CD11c+ DC (BMDC), and to interfere with antigen and MHC-II molecule processing and Toll-like receptor signalling pathway, resulting in functionally deficient dendritic cells that induce a suboptimal immune response in mouse models. (<xref ref-type="bibr" rid="B87">Sun et&#xa0;al., 2013</xref>).</p>
<p>In addition to individual molecules, the recent characterization of EVs secreted by different nematodes has highlighted their potential role as immunomodulators. Administration of <italic>H.&#xa0;polygyrus bakeri</italic> EVs reduced lung immunopathology by modulating innate immunity <italic>via</italic> suppression of the early IL-33 and the later type 2 (specially ILC2) allergic responses (<xref ref-type="bibr" rid="B15">Buck et&#xa0;al., 2014</xref>). Furthermore, <italic>N. brasiliensis</italic> secreted EVs suppressed the production and secretion of proinflammatory cytokines and increased the expression of IL-10, protecting mice from T-cell-dependent induced colitis (<xref ref-type="bibr" rid="B33">Eichenberger et&#xa0;al., 2018a</xref>).</p>
<p>In conclusion, the latest advances have highlighted the similarities between several human nematodes and their respective murine models at a genomic and proteomic level. These results highlight the suitability of these models, not only for the study of the immune responses associated to infection with STHs, but also, in some cases, for the development of new vaccine candidates and immunomodulatory molecules. However, further research should aim at integrating the different available <italic>omic</italic> technologies (e.g. transcriptomic, proteomic, metabolomics and lipidomic, among others) to obtain a more comprehensive picture of the biology of these worms and confidently validate candidate molecules.</p>
</sec>
<sec id="s5">
<title>Author Contributions</title>
<p>KM, CC, and JS analyzed the data, wrote, and edited the manuscript. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="s6">
<title>Funding</title>
<p>JS is a Miguel Servet Fellow funded by Instituto de Salud Carlos III (CP17III/00002, MPY 406/18 and MPY 504/19). The funders had no role in study design, analysis, decision to publish, or preparation of the manuscript.</p>
</sec>
<sec id="s7" sec-type="COI-statement">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<ack>
<title>Acknowledgments</title>
<p>We would like to thank Dr. Mark S. Pearson for carefully reading the manuscript and providing comments.</p>
</ack>
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