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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Cell. Infect. Microbiol.</journal-id>
<journal-title>Frontiers in Cellular and Infection Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Cell. Infect. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">2235-2988</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fcimb.2017.00360</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Vaccinomics Approach to the Identification of Candidate Protective Antigens for the Control of Tick Vector Infestations and <italic>Anaplasma phagocytophilum</italic> Infection</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Contreras</surname> <given-names>Marinela</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/399398/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Alberdi</surname> <given-names>Pilar</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/91332/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Fern&#x000E1;ndez De Mera</surname> <given-names>Isabel G.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/98988/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Krull</surname> <given-names>Christoph</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Nijhof</surname> <given-names>Ard</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Villar</surname> <given-names>Margarita</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/296192/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>De La Fuente</surname> <given-names>Jos&#x000E9;</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/42307/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>SaBio, Instituto de Investigaci&#x000F3;n en Recursos Cineg&#x000E9;ticos IREC-CSIC-UCLM-JCCM</institution> <country>Ciudad Real, Spain</country></aff>
<aff id="aff2"><sup>2</sup><institution>Institute for Parasitology and Tropical Veterinary Medicine, Freie Universit&#x000E4;t Berlin</institution> <country>Berlin, Germany</country></aff>
<aff id="aff3"><sup>3</sup><institution>Department of Veterinary Pathobiology, Center for Veterinary Health Sciences, Oklahoma State University</institution> <country>Stillwater, OK, United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Alfredo G. Torres, University of Texas Medical Branch, United States</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Tonya J. Webb, University of Maryland, Baltimore, United States; Bindu Sukumaran, Duke-NUS Medical School, Singapore</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: Jos&#x000E9; De La Fuente <email>jose_delafuente&#x00040;yahoo.com</email></p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>09</day>
<month>08</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="collection">
<year>2017</year>
</pub-date>
<volume>7</volume>
<elocation-id>360</elocation-id>
<history>
<date date-type="received">
<day>19</day>
<month>06</month>
<year>2017</year>
</date>
<date date-type="accepted">
<day>26</day>
<month>07</month>
<year>2017</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2017 Contreras, Alberdi, Fern&#x000E1;ndez De Mera, Krull, Nijhof, Villar and De La Fuente.</copyright-statement>
<copyright-year>2017</copyright-year>
<copyright-holder>Contreras, Alberdi, Fern&#x000E1;ndez De Mera, Krull, Nijhof, Villar and De La Fuente</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract><p><italic>Anaplasma phagocytophilum</italic> is an emerging tick-borne pathogen causing human granulocytic anaplasmosis (HGA), tick-borne fever (TBF) in small ruminants, and other forms of anaplasmosis in different domestic and wild animals. The main vectors of this pathogen are <italic>Ixodes</italic> tick species, particularly <italic>I. scapularis</italic> in the United States and <italic>I. ricinus</italic> in Europe. One of the main limitations for the development of effective vaccines for the prevention and control of <italic>A. phagocytophilum</italic> infection and transmission is the identification of effective tick protective antigens. The objective of this study was to apply a vaccinomics approach to <italic>I. scapularis</italic>-<italic>A. phagocytophilum</italic> interactions for the identification and characterization of candidate tick protective antigens for the control of vector infestations and <italic>A. phagocytophilum</italic> infection. The vaccinomics pipeline included the use of quantitative transcriptomics and proteomics data from uninfected and <italic>A. phagocytophilum</italic>-infected <italic>I. scapularis</italic> ticks for the selection of candidate protective antigens based on the variation in tick mRNA and protein levels in response to infection, their putative biological function, and the effect of antibodies against these proteins on tick cell apoptosis and pathogen infection. The characterization of selected candidate tick protective antigens included the identification and characterization of <italic>I. ricinus</italic> homologs, functional characterization by different methodologies including RNA interference, immunofluorescence, gene expression profiling, and artificial tick feeding on rabbit antibodies against the recombinant antigens to select the candidates for vaccination trials. The vaccinomics pipeline developed in this study resulted in the identification of two candidate tick protective antigens that could be selected for future vaccination trials. The results showed that <italic>I. scapularis</italic> lipocalin (ISCW005600) and lectin pathway inhibitor (AAY66632) and <italic>I. ricinus</italic> homologs constitute candidate protective antigens for the control of vector infestations and <italic>A. phagocytophilum</italic> infection. Both antigens are involved in the tick evasion of host defense response and pathogen infection and transmission, but targeting different immune response pathways. The vaccinomics pipeline proposed here could be used to continue the identification and characterization of candidate tick protective antigens for the development of effective vaccines for the prevention and control of HGA, TBF, and other forms of anaplasmosis caused by <italic>A. phagocytophilum</italic>.</p></abstract>
<kwd-group>
<kwd>anaplasmosis</kwd>
<kwd>immunology</kwd>
<kwd>vaccine</kwd>
<kwd>tick</kwd>
<kwd><italic>Ixodes</italic></kwd>
<kwd><italic>Anaplasma phagocytophilum</italic></kwd>
</kwd-group>
<contract-num rid="cn001">BFU2016-79892-P</contract-num>
<contract-num rid="cn002">201440E098</contract-num>
<contract-sponsor id="cn001">Ministerio de Econom&#x000ED;a y Competitividad<named-content content-type="fundref-id">10.13039/501100003329</named-content></contract-sponsor>
<contract-sponsor id="cn002">Consejo Superior de Investigaciones Cient&#x000ED;ficas<named-content content-type="fundref-id">10.13039/501100003339</named-content></contract-sponsor>
<contract-sponsor id="cn003">Universidad de Castilla-La Mancha<named-content content-type="fundref-id">10.13039/501100007480</named-content></contract-sponsor>
<counts>
<fig-count count="7"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="85"/>
<page-count count="15"/>
<word-count count="10451"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>The intracellular bacterium, <italic>Anaplasma phagocytophilum</italic> (Rickettsiales: Anaplasmataceae) is an emerging tick-borne pathogen causing human granulocytic anaplasmosis (HGA), which has emerged as a tick-borne disease of humans in the United States, Europe and Asia, and tick-borne fever (TBF) in small ruminants, most notably in sheep in Europe (Gordon et al., <xref ref-type="bibr" rid="B40">1932</xref>; Foggie, <xref ref-type="bibr" rid="B37">1951</xref>; Dumler et al., <xref ref-type="bibr" rid="B34">2001</xref>; Stuen et al., <xref ref-type="bibr" rid="B68">2013</xref>; Bakken and Dumler, <xref ref-type="bibr" rid="B9">2015</xref>; Dugat et al., <xref ref-type="bibr" rid="B33">2015</xref>; Severo et al., <xref ref-type="bibr" rid="B65">2015</xref>). Clinical presentation of <italic>A. phagocytophilum</italic> infection has been also documented in goats, cattle, horses, dogs, cats, roe deer, and reindeer (Severo et al., <xref ref-type="bibr" rid="B65">2015</xref>). The main vectors of this pathogen are <italic>Ixodes</italic> tick species, particularly <italic>I. scapularis</italic> in the United States and <italic>I. ricinus</italic> in Europe (Stuen et al., <xref ref-type="bibr" rid="B68">2013</xref>; Bakken and Dumler, <xref ref-type="bibr" rid="B9">2015</xref>).</p>
<p>Despite the burden that <italic>A. phagocytophilum</italic> represents for humans and animals, vaccines are not available for prevention and control of pathogen infection and transmission (Dumler et al., <xref ref-type="bibr" rid="B34">2001</xref>; Stuen et al., <xref ref-type="bibr" rid="B68">2013</xref>, <xref ref-type="bibr" rid="B69">2015</xref>; Bakken and Dumler, <xref ref-type="bibr" rid="B9">2015</xref>; Severo et al., <xref ref-type="bibr" rid="B65">2015</xref>; Contreras et al., <xref ref-type="bibr" rid="B20">2017</xref>). One of the main limitations for the development of effective vaccines for the prevention and control of <italic>A. phagocytophilum</italic> infection and transmission is the identification of effective tick protective antigens. Recently, different approaches have been developed for the identification and characterization of candidate tick protective antigens (de la Fuente and Contreras, <xref ref-type="bibr" rid="B27">2015</xref>; de la Fuente et al., <xref ref-type="bibr" rid="B28">2016a</xref>). Vaccinomics is one of the approaches that have been used by our group for the identification of tick-derived and pathogen-derived protective antigens (de la Fuente and Merino, <xref ref-type="bibr" rid="B32">2013</xref>; Merino et al., <xref ref-type="bibr" rid="B55">2013</xref>; Antunes et al., <xref ref-type="bibr" rid="B5">2014</xref>; de la Fuente and Contreras, <xref ref-type="bibr" rid="B27">2015</xref>; Contreras et al., <xref ref-type="bibr" rid="B21">2016</xref>, <xref ref-type="bibr" rid="B20">2017</xref>; de la Fuente et al., <xref ref-type="bibr" rid="B28">2016a</xref>; Villar et al., <xref ref-type="bibr" rid="B81">2017</xref>). Vaccinomics is a holistic approach based on the use of genome-scale or omics technologies integrated in a systems biology approach to characterize tick-host-pathogen interactions for the development of next-generation vaccines (de la Fuente and Merino, <xref ref-type="bibr" rid="B32">2013</xref>; Contreras et al., <xref ref-type="bibr" rid="B21">2016</xref>; de la Fuente et al., <xref ref-type="bibr" rid="B28">2016a</xref>; Villar et al., <xref ref-type="bibr" rid="B81">2017</xref>). In this translational approach, basic biological information on tick-host-pathogen interactions translates into the identification and subsequent evaluation of new candidate protective antigens (de la Fuente and Merino, <xref ref-type="bibr" rid="B32">2013</xref>; de la Fuente et al., <xref ref-type="bibr" rid="B28">2016a</xref>; Villar et al., <xref ref-type="bibr" rid="B81">2017</xref>).</p>
<p>The sequence, assembly and annotation of the <italic>I. scapularis</italic> genome were recently released (Gulia-Nuss et al., <xref ref-type="bibr" rid="B41">2016</xref>), and various genomics, transcriptomics and proteomics studies in <italic>I. ricinus</italic> suggest that these tick species are genetically closely related (Schwarz et al., <xref ref-type="bibr" rid="B64">2013</xref>, <xref ref-type="bibr" rid="B63">2014</xref>; Genomic Resources Development Consortium et al., <xref ref-type="bibr" rid="B39">2014</xref>; Cramaro et al., <xref ref-type="bibr" rid="B23">2015</xref>; Kotsyfakis et al., <xref ref-type="bibr" rid="B45">2015</xref>; Weisheit et al., <xref ref-type="bibr" rid="B84">2015</xref>; Chmela&#x00159; et al., <xref ref-type="bibr" rid="B19">2016</xref>). These results open new opportunities for research on tick-host-pathogen interactions and the possibility of identifying tick protective antigens for both <italic>I. scapularis</italic> and I. <italic>ricinus</italic> major vectors of <italic>A. phagocytophilum</italic> (de la Fuente et al., <xref ref-type="bibr" rid="B29">2016b</xref>).</p>
<p>Recently, transcriptomics, proteomics and metabolomics datasets have been integrated and used for the characterization of <italic>I. scapularis</italic>-<italic>A. phagocytophilum</italic> molecular interactions (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>; Villar et al., <xref ref-type="bibr" rid="B78">2015a</xref>,<xref ref-type="bibr" rid="B79">b</xref>, <xref ref-type="bibr" rid="B80">2016</xref>; Cabezas-Cruz et al., <xref ref-type="bibr" rid="B14">2016</xref>, <xref ref-type="bibr" rid="B15">2017a</xref>,<xref ref-type="bibr" rid="B16">b</xref>; de la Fuente et al., <xref ref-type="bibr" rid="B30">2016c</xref>, <xref ref-type="bibr" rid="B26">2017</xref>; Gulia-Nuss et al., <xref ref-type="bibr" rid="B41">2016</xref>; Shaw et al., <xref ref-type="bibr" rid="B66">2017</xref>). Herein, a vaccinomics pipeline was developed based on quantitative transcriptomics and proteomics data from uninfected and <italic>A. phagocytophilum</italic>-infected <italic>I. scapularis</italic> nymphs, adult female midguts and salivary glands, and ISE6 cells (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>; Villar et al., <xref ref-type="bibr" rid="B78">2015a</xref>). The vaccinomics pipeline was then used for the identification of candidate protective antigens for the control of vector infestations and pathogen infection. The results showed that <italic>I. scapularis</italic> ISCW005600 and AAY66632 and <italic>I. ricinus</italic> homologs constitute candidate protective antigens for the control of vector infestations and <italic>A. phagocytophilum</italic> infection.</p>
</sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and methods</title>
<sec>
<title>Ticks and cultured tick cells</title>
<p><italic>Ixodes scapularis</italic> ticks were obtained from the laboratory colony maintained at the Oklahoma State University Tick Rearing Facility. Nymphs and adult female <italic>I. scapularis</italic> were infected with <italic>A. phagocytophilum</italic> by feeding on a sheep inoculated intravenously with approximately 1 &#x000D7; 10<sup>7</sup> <italic>A. phagocytophilum</italic> (NY18 isolate)-infected HL-60 human cells (90&#x02013;100% infected cells) (Kocan et al., <xref ref-type="bibr" rid="B44">2012</xref>; Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>). Animals were housed and experiments conducted with the approval and supervision of the OSU Institutional Animal Care and Use Committee (Animal Care and Use Protocol, ACUP No. VM1026). <italic>I. ricinus</italic> ticks were obtained from the laboratory colony maintained at the Freie Universit&#x000E4;t Berlin. Larvae and nymphs were fed on mice and adults on rabbits. The <italic>I. scapularis</italic> embryo-derived tick cell line ISE6, provided by Ulrike Munderloh, University of Minnesota, USA, was cultured in L-15B300 medium as described previously (Kurtti et al., <xref ref-type="bibr" rid="B48">1996</xref>; Munderloh et al., <xref ref-type="bibr" rid="B57">1999</xref>; Villar et al., <xref ref-type="bibr" rid="B78">2015a</xref>). IRE/CTVM20 embryo-derived tick cells, provided by the Tick Cell Biobank, were maintained as described previously (Bell-Sakyi et al., <xref ref-type="bibr" rid="B12">2007</xref>; Alberdi et al., <xref ref-type="bibr" rid="B2">2015</xref>). Tick cells were first inoculated with <italic>A. phagocytophilum</italic> (human NY18 isolate; Asanovich et al., <xref ref-type="bibr" rid="B6">1997</xref>)-infected HL-60 cells and maintained according to Munderloh et al. (<xref ref-type="bibr" rid="B57">1999</xref>). Uninfected and infected cultures (<italic>N</italic> &#x0003D; 4 independent cultures with approximately 10<sup>7</sup> cells each) were sampled at 7 days post-infection (dpi) (75% infected cells). The percentage of cells infected with <italic>A. phagocytophilum</italic> was calculated by examining at least 200 cells using a 100x oil immersion objective.</p>
</sec>
<sec>
<title>Transcriptomics and proteomics datasets</title>
<p>The quantitative transcriptomics and proteomics data for uninfected and <italic>A. phagocytophilum</italic>-infected <italic>I. scapularis</italic> nymphs, adult female midguts and salivary glands, and ISE6 cells were obtained from previously published results (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>; Villar et al., <xref ref-type="bibr" rid="B78">2015a</xref>) and deposited at the Dryad repository database, NCBI&#x00027;s Gene Expression Omnibus database and ProteomeXchange Consortium via the PRIDE partner repository with the dataset identifier <ext-link ext-link-type="NCBI:geo" xlink:href="PXD002181">PXD002181</ext-link> and doi: <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.6019/PXD002181">10.6019/PXD002181</ext-link>.</p>
</sec>
<sec>
<title>Sequence analysis</title>
<p>To find the <italic>I. ricinus</italic> homologs, selected <italic>I. scapularis</italic> sequences were blasted against the <italic>I. ricinus</italic> database using the Blastp tool from BLAST (Altschul et al., <xref ref-type="bibr" rid="B4">1990</xref>; Madden et al., <xref ref-type="bibr" rid="B51">1996</xref>), and the sequences with the lowest <italic>E</italic>-value were selected. Gene ontology (GO) analysis for biological process (BP) was done with Blast2GO software (version 3.0; <ext-link ext-link-type="uri" xlink:href="http://www.blast2go.com">http://www.blast2go.com</ext-link>) (Villar et al., <xref ref-type="bibr" rid="B82">2014</xref>).</p>
</sec>
<sec>
<title>Production of recombinant proteins</title>
<p>The coding sequences for <italic>I. scapularis</italic> candidate protective antigens were amplified from synthetic genes optimized for codon usage in <italic>Escherichia coli</italic> (Genscript Corporation, Piscataway, NJ, USA) using sequence-specific primers (Table <xref ref-type="table" rid="T1">1</xref>). The amplified DNA fragments were cloned into the expression vector pET101 and expressed in <italic>E. coli</italic> strain BL21 using the Champion pET101 Directional TOPO Expression kit (Carlsbad, CA, USA). Recombinant proteins were fused to Histidine tags for purification by affinity to Ni (Merino et al., <xref ref-type="bibr" rid="B55">2013</xref>; Moreno-Cid et al., <xref ref-type="bibr" rid="B56">2013</xref>). Transformed <italic>E. coli</italic> strains were induced with IPTG for 4.5 h to produce recombinant proteins, which were purified to &#x0003E;85% of total cell proteins by Ni affinity chromatography (Genscript Corporation) as previously described (Merino et al., <xref ref-type="bibr" rid="B55">2013</xref>; Moreno-Cid et al., <xref ref-type="bibr" rid="B56">2013</xref>) using 1 ml HisTrap FF columns mounted on an AKTA-FPLC system (GE Healthcare, Piscataway, NJ, USA) in the presence of 7 M urea lysis buffer. The purified antigens were refolded by dialysis against 1,000 volumes of PBS, pH 7.4 (137 mM NaCl, 2.7 mM KCl, 10 mM Na<sub>2</sub>HPO<sub>4</sub>, 1.8 mM KH<sub>2</sub>PO<sub>4</sub>) for 12 h at 4&#x000B0;C.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Oligonucleotide primers used in this study for cloning, RNAi and RT-PCR.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>GenBank accession No</bold>.</th>
<th valign="top" align="left"><bold>Oligonucleotide sequence (5&#x02032;-3&#x02032; for forward and reverse primers)</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left" colspan="2" style="background-color:#bbbdc0"><bold>CLONING</bold></td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW024685">ISCW024685</ext-link></td>
<td valign="top" align="left">CACCATGAAAAGCAGCGCACTGCTG</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">GCGTTTACCACGAACGCACC</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW024295">ISCW024295</ext-link></td>
<td valign="top" align="left">CACCATGCCGAAACAAGGCGAAAC</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">TCCAGAGTCACCACACAAAACG</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW022212">ISCW022212</ext-link></td>
<td valign="top" align="left">CACCATGTGGGGTCAGATTGCGCT</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">ACAGATGAATTTTTTCAGGC</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW020900">ISCW020900</ext-link></td>
<td valign="top" align="left">CACCATGAACAAAGCGATCTTCAT</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">CACTTCACCGAAAAAGCCGC</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW000326">ISCW000326</ext-link></td>
<td valign="top" align="left">CACCATGCCGGCGTCAATGAAAAG</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">CAGAGAACCCAGATTCGGAA</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW008146">ISCW008146</ext-link></td>
<td valign="top" align="left">CACCATGGATTTTGATGACCTGTT</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">GAAGCTCAGGGTGTTCTGTT</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW008641">ISCW008641</ext-link></td>
<td valign="top" align="left">CACCATGCAACGTGACATTTTTAG</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">CCAACAGCCCGGCTGCGATT</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW024499">ISCW024499</ext-link></td>
<td valign="top" align="left">CACCATGTGCCTGGTGTTTGCAAC</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">GCGCAGAAAGGAACTCGTAC</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW005600">ISCW005600</ext-link></td>
<td valign="top" align="left">CACCATGATTCGTCAGGTTCGCGA</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">CGAACCTGAGATCGATGAGG</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW013709">ISCW013709</ext-link></td>
<td valign="top" align="left">CACCATGTTTCGTACCAGCTCTGG</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">CACAATATAATCCGGTGCAC</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW017117">ISCW017117</ext-link></td>
<td valign="top" align="left">CACCATGCTGAGTGTGCTGCTGGG</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">CGTGGTGGCGTCCGGCGGCG</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW013574">ISCW013574</ext-link></td>
<td valign="top" align="left">CACCATGTATCAGCTGCGCGATTT</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">GCAACGGGATTTGCGAACAC</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW018900">ISCW018900</ext-link></td>
<td valign="top" align="left">CACCATGGGCCCGTTTATTGGTCT</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">GCCGATAATGCGACCGATAA</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW023907">ISCW023907</ext-link></td>
<td valign="top" align="left">CACCATGCCGGTCAATCGCCTGAT</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">AACTTTACGAAAGAAAAACA</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW024682">ISCW024682</ext-link></td>
<td valign="top" align="left">CACCATGATTCATGAACCGGTGAT</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">ATACGGACAGTACAGTTTGCA</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW015453">ISCW015453</ext-link></td>
<td valign="top" align="left">CACCATGATGAAAAGCCCGCTGTTTAT</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">ACCGAAAAAGCCGTGGCCGA</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW021670">ISCW021670</ext-link></td>
<td valign="top" align="left">CACCATGTGGGAACTGCATGCCGA</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">CTCCTGGGTAATATTACGCGT</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW017271">ISCW017271</ext-link></td>
<td valign="top" align="left">CACCATGTGCAGCGATTCTAAACC</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">CGGCAGATAGGAACCGTGCG</td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="AAY66632">AAY66632</ext-link></td>
<td valign="top" align="left">CACCATGGGCCTGACCGGTACCAC</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">GTTGTCTTTGGTTTTCTTGG</td>
</tr>
<tr>
<td valign="top" align="left" colspan="2" style="background-color:#bbbdc0"><bold>RNAi AND RT-PCR</bold></td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="ISCW005600">ISCW005600</ext-link></td>
<td valign="top" align="left">TCCCCTTCTCAAAGGAGGAT<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
</tr>
<tr>
<td/>
<td valign="top" align="left">ATCCACAGGCGGATATGAAG<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="AAY66632">AAY66632</ext-link></td>
<td valign="top" align="left">ACCCGTTCATGGGACAAATA<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
</tr>
<tr>
<td/>
<td valign="top" align="left">TTCTTGGGCTTCTCAGTTGG<xref ref-type="table-fn" rid="TN1"><sup>&#x0002A;</sup></xref></td>
</tr>
<tr>
<td valign="top" align="left"><ext-link ext-link-type="DDBJ/EMBL/GenBank" xlink:href="DQ066214">DQ066214</ext-link> (<italic>rpS4</italic>)</td>
<td valign="top" align="left">GGTGAAGAAGATTGTCAAGCAGAG</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">TGAAGCCAGCAGGGTAGTTTG</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="TN1"><label>&#x0002A;</label><p><italic>The same oligonucleotide primers were used to determine gene expression levels by RT-PCR and for the generation of dsRNA for RNAi. To produce dsRNA, the T7 promoter sequence 5&#x02032;-GAATTAATACGACTCACTATAGGGAGA-3&#x02032;was added to the 5&#x02032;-end of each primer</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec>
<title>Production of rabbit polyclonal IgG antibodies</title>
<p>For each recombinant tick protein and total ISE6 tick cell proteins, two New Zealand white rabbits (<italic>Oryctulagus cuniculus</italic>) were subcutaneously injected at weeks 0, 4, and 6 with 50 &#x003BC;g protein in 0.4 ml Montanide ISA 50 V adjuvant (Seppic, Paris, France). Blood was collected before injection and 2 weeks after the last immunization to prepare pre-immune and immune sera, respectively. Serum aliquots were kept at 4&#x000B0;C for immediate use or at &#x02212;20&#x000B0;C for long-term storage. The IgG were purified from serum samples using the Montage antibody purification kit and spin columns with PROSEP-A media (Millipore, Billerica, MA, USA) following the manufacturer&#x00027;s recommendations.</p>
</sec>
<sec>
<title>Western blot analysis</title>
<p>Ten micrograms of each recombinant protein or 20 &#x003BC;g total proteins from ISE6 tick cells were loaded onto a 12% SDS-polyacrylamide pre-cast gel (Life Science, Hercules, CA, USA) and transferred to a nitrocellulose membrane. The membrane was blocked with 5% bovine serum albumin (BSA) (Sigma-Aldrich, St. Louis, MI, USA) for 2 h at room temperature (RT), and washed four times with TBS (50 mM Tris-Cl, pH 7.5, 150 mM NaCl, 0.5% Tween 20). Purified rabbit IgG were used at a 1:500 dilution in TBS, and the membrane was incubated overnight at 4&#x000B0;C and washed four times with TBS. The membrane was then incubated with an anti-rabbit IgG-horseradish peroxidase (HRP) conjugate (Sigma-Aldrich) diluted 1:1,000 in TBS with 3% BSA. The membrane was washed five times with TBS and finally developed with TMB (3,3&#x02032;, 5,5&#x02032;- tetramethylbenzidine) stabilized substrate for HRP (Promega, Madrid, Spain) according to the manufacturer recommendations.</p>
</sec>
<sec>
<title>Immunofluorescence assay (IFA) in adult female ticks</title>
<p>Adult <italic>I. scapularis</italic> females were infected with <italic>A. phagocytophilum</italic> (NY18) as described above. Female ticks were removed from the sheep 10 days after infestation, held in the humidity chamber for 4 days and fixed with 4% paraformaldehyde in 0.2 M sodium cacodylate buffer, dehydrated in a graded series of ethanol and embedded in paraffin (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>). Sections (4 &#x003BC;m) were prepared and mounted on glass slides. The paraffin was removed from the sections with xylene and the sections were hydrated by successive 2 min washes with a graded series of 100, 95, 80, 75, and 50% ethanol. The slides were treated with Proteinase K (Dako, Barcelona, Spain) for 7 min, washed with PBS and incubated with 3% BSA (Sigma-Aldrich) in PBS for 1 h at RT. The slides were then incubated for 14 h at 4&#x000B0;C with primary rabbit IgG antibodies diluted 1:100 in 3% BSA/PBS and, after 3 washes in PBS, developed for 1 h with goat-anti-rabbit IgG conjugated with phycoerythrin (PE) (Sigma-Aldrich) (diluted 1:50 in 3% BSA/PBS). The slides were washed twice with PBS and mounted in ProLong Antifade with DAPI reagent (Molecular Probes, Eugene, OR, USA). The sections were examined using a Zeiss LSM 800 laser scanning confocal microscope (Carl Zeiss, Oberkochen, Germany). Sections of uninfected ticks and IgG from pre-immune and anti-ISE6 sera were used as controls.</p>
</sec>
<sec>
<title>Antibody inhibition assay</title>
<p>The inhibitory effect of rabbit IgG antibodies on <italic>A. phagocytophilum</italic> (NY18) was conducted as described previously (Villar et al., <xref ref-type="bibr" rid="B79">2015b</xref>). ISE6 and IRE/CTVM20 tick cells were pooled and used to seed 24-well plates for each assay. Each well received 1 &#x000D7; 10<sup>6</sup> cells in L-15B300 (ISE6) or L-15/L-15B (IRE/CTVM20) medium 24 h prior to inoculation with <italic>A. phagocytophilum</italic>. Infected cultures for inoculum were harvested when infection reached 80% and host cells were mechanically disrupted with a syringe and 26-gauge needle. Purified IgG (100 &#x003BC;g/ml) were added to the culture media and incubated with the cells for 48 h. Then, the medium with antibodies was removed and the <italic>A. phagocytophilum</italic> inoculum (100 &#x003BC;l) was added to the cell monolayers and incubated at 31&#x000B0;C for 60 min. The inoculum was removed from the wells and cell monolayers washed three times with PBS. Complete medium (1 ml) was added to each well and the plates were incubated at 31&#x000B0;C. The control included inoculum incubated with rabbit pre-immune and anti-ISE6 IgG. Four replicates were done for each treatment. After 72 h, cells from all wells were harvested and processed for <italic>A. phagocytophilum</italic> detection by real-time PCR after DNA extraction. Results were compared between treatments by the Student&#x00027;s <italic>t</italic>-test with unequal variance (<italic>P</italic> &#x0003D; 0.05; <italic>N</italic> &#x0003D; 4 biological replicates).</p>
</sec>
<sec>
<title>Flow cytometry of tick cells incubated with rabbit IgG antibodies</title>
<p>Approximately 5 &#x000D7; 10<sup>5</sup>&#x02013;1 &#x000D7; 10<sup>6</sup> of <italic>A. phagocytophilum</italic>-infected ISE6 and IRE/CTVM20 tick cells were collected after incubation with rabbit IgG. Purified IgG (2.2&#x02013;2.4 mg/ml) were mixed with <italic>A. phagocytophilum</italic> and incubated with tick cells as described above in the antibody inhibition assay. Apoptosis was measured by flow cytometry using the Annexin V-fluorescein isothiocyanate (FITC) apoptosis detection kit (Immunostep, Salamanca, Spain) following the manufacturer&#x00027;s protocols. The technique detects changes in phospholipid symmetry analyzed by measuring Annexin V (labeled with FITC) binding to phosphatidylserine, which is exposed in the external surface of the cell membrane in apoptotic cells. Cells were stained simultaneously with the non-vital dye propidium iodide (PI) allowing the discrimination of intact cells (Annexin V-FITC negative, PI negative) and early apoptotic cells (Annexin V-FITC positive, PI negative). All samples were analyzed on a FAC-Scalibur flow cytometer equipped with CellQuest Pro software (BD Biosciences, Madrid, Spain). The viable cell population was gated according to forward-scatter and side-scatter parameters. The percentage of apoptotic cells was determined by flow cytometry after Annexin V-FITC and PI labeling and compared between treated and untreated uninfected cells by Student&#x00027;s <italic>t</italic>-test with unequal variance (<italic>P</italic> &#x0003D; 0.05; <italic>N</italic> &#x0003D; 4 biological replicates).</p>
</sec>
<sec>
<title>RNA interference (RNAi) for gene knockdown in tick cells</title>
<p>RNAi was used to characterize the effect of gene knockdown on tick cell pathogen infection. Oligonucleotide primers homologous to selected <italic>I. scapularis</italic> ISCW005600 and AAY66632 genes containing T7 promoters (Table <xref ref-type="table" rid="T1">1</xref>) were used for <italic>in vitro</italic> transcription and synthesis of dsRNA as described previously (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B7">2013</xref>), using the Access RT-PCR system (Promega, Madison, WI, USA) and the Megascript RNAi kit (Ambion, Austin, TX, USA). The unrelated <italic>Rs86</italic> dsRNA was synthesized using the same methods described previously and used as negative control (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B7">2013</xref>). The dsRNA was purified and quantified by spectrophotometry. RNAi experiments were conducted in cell cultures by incubating ISE6 tick cells with 10 &#x003BC;l dsRNA (5 &#x000D7; 10<sup>10</sup>&#x02013;5 &#x000D7; 10<sup>11</sup> molecules/&#x003BC;l) and 90 &#x003BC;l L15B300 medium in 24-well plates using 5 wells per treatment (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B7">2013</xref>). Control cells were incubated with the unrelated <italic>Rs86</italic> dsRNA. After 48 h of dsRNA exposure, tick cells were infected with cell-free <italic>A. phagocytophilum</italic> (NY18) obtained from approximately 5 &#x000D7; 10<sup>6</sup> infected HL-60 cells (90&#x02013;100% infected cells) (Thomas and Fikrig, <xref ref-type="bibr" rid="B71">2007</xref>) and resuspended in culture medium to use 1 ml/well. Cells were incubated for an additional 72 h, harvested and used for DNA and RNA extraction. RNA was used to analyze gene knockdown by real-time RT-PCR with respect to <italic>Rs86</italic> control. DNA was used to quantify the <italic>A. phagocytophilum</italic> infection levels by real-time PCR.</p>
</sec>
<sec>
<title>Determination of <italic>A. phagocytophilum</italic> infection by real-time PCR</title>
<p><italic>A. phagocytophilum</italic> DNA levels were characterized by <italic>major surface protein 4</italic> (<italic>msp4</italic>) real-time PCR normalized against tick <italic>ribosomal protein S4</italic> (<italic>rpS4</italic>) as described previously (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>). Normalized Ct-values were compared between untreated and treated cells by Student&#x00027;s <italic>t</italic>-test with unequal variance (<italic>P</italic> &#x0003D; 0.05; <italic>N</italic> &#x0003D; 4 biological replicates).</p>
</sec>
<sec>
<title>Determination of tick mRNA levels by real-time RT-PCR</title>
<p>Total RNA was extracted from ISE6 tick cell cultures using TriReagent (Sigma-Aldrich) following manufacturer&#x00027;s recommendations. The expression of selected <italic>I. scapularis</italic> ISCW005600 and AAY66632 genes was characterized using total RNA extracted from infected and uninfected ISE6 tick cells. Real-time RT-PCR was performed on RNA samples using gene-specific oligonucleotide primers (Table <xref ref-type="table" rid="T1">1</xref>) and the Kapa SYBR Fast One-Step qRT-PCR Kit (Kapa Biosystems, Wilmington, MA, USA) and the Rotor-Gene Real-Time PCR Detection System (Qiagen, Madrid, Spain). A dissociation curve was run at the end of the reaction to ensure that only one amplicon was formed and that the amplicons denatured consistently at the same temperature range for every sample. The mRNA levels were normalized against tick <italic>rpS4</italic> using the genNorm method (Delta-Delta-Ct, ddCT) as described previously (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>). Normalized Ct-values were compared between infected and uninfected tick cells by Student&#x00027;s <italic>t</italic>-test with unequal variance (<italic>P</italic> &#x0003D; 0.05; <italic>N</italic> &#x0003D; 4 biological replicates).</p>
</sec>
<sec>
<title>Artificial tick feeding</title>
<p>Artificial tick feeding was conducted as previously described for <italic>Dermacentor reticulatus</italic> (Krull et al., <xref ref-type="bibr" rid="B47">2017</xref>). Briefly, 17&#x02013;19 female and 3 male <italic>I. ricinus</italic> ticks were placed on each feeding unit. The feeding unit was subsequently closed by the insertion of a pierced plastic lid (PE-LD Stopfen 26 mm, Brimon Laborbedarf, Hamburg, Germany) wrapped in gauze fabric into the feeding unit, leaving approximately one cm between the silicone membrane and lid. The feeding unit was then hung into a glass beaker (50 ml, Simax, Czech Republic) containing the bovine blood using a rubber ring with an inner diameter of 32 mm (Lux, Wermelskirchen, Germany). Blood was supplemented with ATP and gentamycin (Krull et al., <xref ref-type="bibr" rid="B47">2017</xref>), and 5 ml blood per feeding unit was pipetted into a sterile beaker and preheated to 37&#x000B0;C on a hot plate. The blood was changed twice daily at 12 &#x000B1; 2 h intervals. During each blood change, the outside of the feeding unit and underside of the silicone membrane were rinsed with sterile 0.9% NaCl solution, pre-heated to body temperature. The number of attached, dead and fed ticks was counted after which the feeding unit was transferred to a new sterile beaker with fresh blood. Males stayed inside the feeding unit until the end of the experiment, to provide them with sufficient opportunity and time to fertilize any females present. Feeding units were placed in an incubator (ICH 256C, Memmert GmbH, Schwabach, Germany), where the blood was maintained at a constant temperature of 37&#x000B0;C using a heating plate (Hot Plate 062, Labotect, G&#x000F6;ttingen, Germany). Environmental conditions were set at 20&#x000B0;C, 80% relative humidity, 5% CO<sub>2</sub> and 15 h light/9 h dark. Once ticks were partially engorged, the feeding units were transferred to a six-well plate (Sarstedt, N&#x000FC;mbrecht, Germany) and ticks were fed for 36 h with 3 ml blood supplemented with 1 mg/ml of pre-immune or antigen-specific purified IgG. Dead and detached engorged ticks were removed, and engorged females that detached were weighed and stored individually in 2 ml Eppendorf tubes with pierced lids, which were kept in desiccators with approximately 90% relative humidity at RT. Ticks were assessed for egg mass 8 weeks post-feeding. The number of dead/fed ticks, ticks and eggs weight, and ticks with or without oviposition were compared between groups by a Fisher&#x00027;s exact test (<italic>P</italic> &#x0003D; 0.05; <ext-link ext-link-type="uri" xlink:href="http://www.socscistatistics.com/tests/fisher/Default2.aspx">http://www.socscistatistics.com/tests/fisher/Default2.aspx</ext-link>).</p>
</sec>
</sec>
<sec id="s3">
<title>Results and discussion</title>
<sec>
<title>Selection of candidate tick protective antigens</title>
<p>A vaccinomics pipeline was developed for the selection and characterization of candidate tick protective antigens for the control of vector infestations and pathogen infection (Figure <xref ref-type="fig" rid="F1">1</xref>). The vaccinomics pipeline included the use of quantitative transcriptomics and proteomics data from uninfected and <italic>A. phagocytophilum</italic>-infected <italic>I. scapularis</italic> ticks (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>) for the selection of candidate protective antigens based on the variation in tick mRNA and protein levels in response to infection, their putative biological function, and the effect of antibodies against these proteins on tick cell apoptosis and pathogen infection (Figure <xref ref-type="fig" rid="F1">1</xref>). The characterization of selected candidate tick protective antigens included the identification and characterization of <italic>I. ricinus</italic> homologs, functional characterization by different methodologies including RNAi, IFA, gene expression profile, and artificial tick feeding on rabbit antibodies against the recombinant antigens to select the candidates for vaccination trials (Figure <xref ref-type="fig" rid="F1">1</xref>). This process could be repeated as many times as needed to cover all potential candidate antigens or until the desired number of candidate antigens for vaccination trials is reached (Figure <xref ref-type="fig" rid="F1">1</xref>). The vaccinomics pipeline included some of the algorithms previously proposed (de la Fuente and Merino, <xref ref-type="bibr" rid="B32">2013</xref>; Contreras et al., <xref ref-type="bibr" rid="B21">2016</xref>) and validated (Merino et al., <xref ref-type="bibr" rid="B55">2013</xref>; Antunes et al., <xref ref-type="bibr" rid="B5">2014</xref>) for the selection and characterization of candidate protective antigens, but for the first time it was applied to integrated transcriptomics and proteomics data of tick-pathogen interactions.</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>Vaccinomics pipeline for the selection and characterization of candidate tick protective antigens for the control of vector infestations and pathogen infection. The quantitative transcriptomics and proteomics data for uninfected and <italic>A. phagocytophilum</italic>-infected <italic>I. scapularis</italic> nymphs, adult female midguts and salivary glands were obtained from previously published results (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>). The selection of candidate tick protective antigens included criteria based on the variation in tick mRNA and protein levels in response to infection, their putative biological function, and the effect of antibodies against these proteins on tick cell apoptosis and pathogen infection. The characterization of selected candidate protective antigens included the identification and characterization of <italic>I. ricinus</italic> homologs, functional analyses by different methodologies, and artificial tick feeding on rabbit antibodies against the recombinant antigens to select the candidates for vaccination trials.</p></caption>
<graphic xlink:href="fcimb-07-00360-g0001.tif"/>
</fig>
<p>The characterization of tick-pathogen molecular interactions was based on the previous work by Ayll&#x000F3;n et al. (<xref ref-type="bibr" rid="B8">2015</xref>) of the <italic>I. scapularis</italic> transcriptome and proteome in response to <italic>A. phagocytophilum</italic> infection in nymphs and female midguts and salivary glands. The highly differentially regulated genes were selected as those with more than 50-fold (log2 normalized fold change &#x0003E;5.64) difference between infected and uninfected tick samples (<italic>P</italic> &#x0003C; 0.00003) (Figure <xref ref-type="fig" rid="F2">2A</xref>). The highly differentially represented proteins were selected as those with more than 15-fold (log2 normalized fold change &#x0003E;3.90) change between infected and uninfected tick samples (<italic>P</italic> &#x0003C; 0.00003) (Figure <xref ref-type="fig" rid="F2">2A</xref>). Of the highly differentially regulated/represented genes/proteins, between 0 and 50% were identified at both mRNA and protein levels in the different samples (Figure <xref ref-type="fig" rid="F2">2B</xref>). The analysis of highly differentially expressed/represented genes/proteins in response to <italic>A. phagocytophilum</italic> infection evidenced tissue-specific differences in response to infection (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>), which were taken into consideration for the selection of candidate protective antigens (Figures <xref ref-type="fig" rid="F2">2A&#x02013;D</xref>). The candidate protective antigens were selected by using the criteria (i) highly differentially up-regulated genes in at least two samples, (ii) highly down-regulated genes in at least one sample, (iii) highly differentially over-represented proteins and identified in the <italic>I. scapularis</italic> proteome, (iv) highly differentially under-represented proteins and identified in the <italic>I. scapularis</italic> proteome, and/or (v) putative BP in tick-pathogen and tick-host interactions (Figure <xref ref-type="fig" rid="F3">3A</xref>). The rationale behind the selection criteria for candidate protective antigens was based on their putative relevance in (i, iii) tick response to infection (de la Fuente et al., <xref ref-type="bibr" rid="B30">2016c</xref>,<xref ref-type="bibr" rid="B31">d</xref>; <xref ref-type="bibr" rid="B26">2017</xref>), (ii, iv) manipulated by <italic>A. phagocytophilum</italic> to decrease tick protective mechanisms and increase infection (de la Fuente et al., <xref ref-type="bibr" rid="B30">2016c</xref>,<xref ref-type="bibr" rid="B31">d</xref>, <xref ref-type="bibr" rid="B26">2017</xref>), and (v) tick-pathogen and tick-host interactions (Figure <xref ref-type="fig" rid="F3">3B</xref>).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Effect of <italic>A. phagocytophilum</italic> infection on <italic>I. scapularis</italic> highly differentially regulated genes and represented proteins. <bold>(A)</bold> Number of tick highly differentially regulated genes and differentially represented proteins that were up-regulated (Up), down-regulated (Down), over-represented (Over) and under-represented (Under) in response to pathogen infection. <bold>(B)</bold> Number of tick highly differentially regulated genes and differentially represented proteins that were up-regulated (Up), down-regulated (Down), over-represented (Over) and under-represented (Under) in response to pathogen infection, and identified at both mRNA and protein levels. <bold>(C)</bold> Venn diagram with highly differentially regulated genes that were identified in tick nymphs, midguts and salivary glands. <bold>(D)</bold> Venn diagram with highly differentially represented proteins that were identified in tick nymphs, midguts and salivary glands. The highly differentially regulated genes were selected as those with more than 50-fold (log2 normalized fold change &#x0003E; 5.64) difference between infected and uninfected tick samples (<italic>P</italic> &#x0003C; 0.00003). The highly differentially represented proteins were selected as those with more than 15-fold (log2 normalized fold change &#x0003E; 3.90) change between infected and uninfected tick samples (<italic>P</italic> &#x0003C; 0.00003). The quantitative transcriptomics and proteomics data for uninfected and <italic>A. phagocytophilum</italic>-infected <italic>I. scapularis</italic> nymphs, adult female midguts and salivary glands were obtained from previously published results (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>).</p></caption>
<graphic xlink:href="fcimb-07-00360-g0002.tif"/>
</fig>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>Criteria for the selection of candidate tick protective antigens. <bold>(A)</bold> Annotation and criteria used for the selection of candidate tick protective antigens. The log2 normalized fold change between infected and uninfected tick samples (<italic>P</italic> &#x0003C; 0.00003) is shown. Bold numbers indicate highly differentially regulated genes (log2 normalized fold change &#x0003E; 5.64) and highly differentially represented proteins (log2 normalized fold change &#x0003E; 3.90) between infected and uninfected tick samples. The selection criteria were (i) highly differentially up-regulated genes in at least two samples, (ii) highly down-regulated genes in at least one sample, (iii) highly differentially over-represented proteins and identified in the <italic>I. scapularis</italic> proteome, (iv) highly differentially under-represented proteins and identified in the <italic>I. scapularis</italic> proteome, and/or (v) putative BP in tick-pathogen and tick-host interactions. <bold>(B)</bold> The GO for BP of selected candidate protective antigens was done with Blast2GO software (version 3.0; <ext-link ext-link-type="uri" xlink:href="http://www.blast2go.com">http://www.blast2go.com</ext-link>).</p></caption>
<graphic xlink:href="fcimb-07-00360-g0003.tif"/>
</fig>
<p>By using these criteria, a total of 12 candidate tick protective antigens were initially selected, and 7 of them fulfilled two of the selection criteria (Figure <xref ref-type="fig" rid="F3">3A</xref>). The recombinant antigens were produced in <italic>E. coli</italic> and used for the preparation of antigen-specific IgG antibodies in immunized rabbits (Figures <xref ref-type="fig" rid="F4">4A,B</xref>). These IgG antibodies were then used for the incubation with <italic>I. scapularis</italic> ISE6 cells before infection with <italic>A. phagocytophilum</italic> to characterize the effect on cell apoptosis (Figure <xref ref-type="fig" rid="F5">5A</xref>) and pathogen infection (Figure <xref ref-type="fig" rid="F5">5B</xref>). The results showed that anti ISCW005600 and AAY66632 IgG significantly increased the percentage of apoptotic cells when compared to negative control cells incubated with pre-immune IgG (Figure <xref ref-type="fig" rid="F5">5A</xref>). The incubation of ISE6 cells with rabbit IgG against recombinant antigens significantly decreased pathogen infection for 7 antigens when compared to the negative control (Figure <xref ref-type="fig" rid="F5">5B</xref>). The positive control cells were incubated with rabbit IgG antibodies against total ISE6 tick cells proteins, which significantly increased cell apoptosis but did not affect pathogen infection when compared to the negative control (Figures <xref ref-type="fig" rid="F5">5A,B</xref>). The anti-ISE6 antibodies did not affect pathogen infection of tick cells, which as previously discussed (Stuen et al., <xref ref-type="bibr" rid="B69">2015</xref>) was due to the presence of not protective dominant antigens in the protein extract used to immunize rabbits for antibody production. Nevertheless, these results showed that incubation of ISE6 tick cells with IgG antibodies against ISCW005600 and AAY66632 antigens affected both cell apoptosis and pathogen infection, and were therefore selected as the candidate tick protective antigens for further characterization (Figures <xref ref-type="fig" rid="F5">5A,B</xref>).</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p>Production of recombinant proteins and rabbit IgG antibodies. <bold>(A)</bold> SDS-PAGE (left panel) and Western blot analysis (right panel) of selected candidate tick protective recombinant antigens. <bold>(B)</bold> Antigens selected for further characterization. (1) SDS-PAGE of recombinant antigens. (2) Western blot analysis of recombinant antigens. (3) SDS-PAGE of total proteins from ISE6 tick cells. (4) Western blot analysis of total proteins from ISE6 tick cells. Western blots were performed with IgG antibodies from rabbits immunized with recombinant antigens. Red dots denote the position of the recombinant antigen. Other protein bands in some of the samples correspond to <italic>E. coli</italic> contamination proteins, and aggregation or degradation products of the recombinant antigens.</p></caption>
<graphic xlink:href="fcimb-07-00360-g0004.tif"/>
</fig>
<fig id="F5" position="float">
<label>Figure 5</label>
<caption><p>Selection of candidate tick protective antigens. Purified rabbit IgG against recombinant candidate tick protective antigens were incubated with <italic>I. scapularis</italic> ISE6 and <italic>I. ricinus</italic> IRE/CTVM20 tick cells before infection with <italic>A. phagocytophilum</italic>. <bold>(A)</bold> Characterization of the effect of rabbit IgG antibodies on ISE6 tick cells apoptosis. <bold>(B)</bold> Characterization of the effect of rabbit IgG antibodies on pathogen infection of ISE6 tick cells. <bold>(C)</bold> Sequence identity between <italic>I. scapularis</italic> and <italic>I. ricinus</italic> homologs. The accession numbers are shown together with corresponding percent identity for nucleotide (nt) and amino acid (aa) sequences and <italic>E</italic>-values. The selected <italic>I. scapularis</italic> sequences were blasted against the <italic>I. ricinus</italic> database using the Blastp tool from BLAST, and the sequences with the lowest <italic>E</italic>-value were selected. <bold>(D)</bold> Characterization of the effect of rabbit IgG antibodies on IRE/CTVM20 tick cells apoptosis. <bold>(E)</bold> Characterization of the effect of rabbit IgG antibodies on pathogen infection of IRE/CTVM20 tick cells. The percentage of apoptotic cells was determined by flow cytometry after Annexin V-FITC and PI labeling. <italic>A. phagocytophilum</italic> DNA levels were determined by <italic>msp4</italic> real-time PCR normalizing against tick <italic>rpS4</italic>. Control cells were incubated with rabbit pre-immune IgG (negative control, Control -) or rabbit anti-ISE6 IgG (positive control, Control &#x0002B;). Results were presented as average &#x0002B; S.D. normalized Ct-values and compared between each treatment and negative control by Student&#x00027;s <italic>t</italic>-test with unequal variance (<italic>P</italic> &#x02264; 0.05; <italic>N</italic> &#x0003D; 4). The selected candidate protective antigens are shown with arrows.</p></caption>
<graphic xlink:href="fcimb-07-00360-g0005.tif"/>
</fig>
</sec>
<sec>
<title>Characterization of selected candidate tick protective antigens</title>
<p>The first step in the characterization of selected candidate tick protective antigens was the identification of <italic>I. ricinus</italic> homologs to evaluate their protective potential in both major tick vector species for <italic>A. phagocytophilum</italic>. The <italic>I. ricinus</italic> homologs for <italic>I. scapularis</italic> ISCW005600 and AAY66632 antigens corresponded to putative salivary gland secreted proteins lipocalins (Beaufays et al., <xref ref-type="bibr" rid="B11">2008</xref>; Schwarz et al., <xref ref-type="bibr" rid="B64">2013</xref>; Vald&#x000E9;s et al., <xref ref-type="bibr" rid="B76">2016</xref>) and a lectin pathway inhibitor (Ribeiro et al., <xref ref-type="bibr" rid="B59">2006</xref>; Schuijt et al., <xref ref-type="bibr" rid="B62">2011</xref>), respectively (Figure <xref ref-type="fig" rid="F5">5C</xref>). At the amino acid level, over 70% sequence identity was obtained for both antigens (Figure <xref ref-type="fig" rid="F5">5C</xref>), suggesting that these proteins are highly conserved in <italic>I. scapularis</italic> and <italic>I. ricinus</italic>, and may be protective in vaccine preparations against both tick vector species.</p>
<p>Experiments were then conducted to characterize the effect of rabbit IgG antibodies against ISCW005600 and AAY66632 antigens in heterologous <italic>I. ricinus</italic> IRE/CTVM20 cells as described before in the homologous <italic>I. scapularis</italic> ISE6 cells (Figures <xref ref-type="fig" rid="F5">5D,E</xref>). As in ISE6 tick cells, the results showed that incubation of IRE/CTVM20 tick cells with IgG antibodies against ISCW005600 and AAY66632 antigens affected both cell apoptosis (Figure <xref ref-type="fig" rid="F5">5D</xref>) and pathogen infection (Figure <xref ref-type="fig" rid="F5">5E</xref>), supporting the putative effect of vaccination with these antigens in both tick vector species.</p>
<p>Functional analyses were conducted to gain additional insight into the possible protective mechanisms for these antigens. The expression of ISCW005600 and AAY66632 was determined by RT-PCR and did not change in response to <italic>A. phagocytophilum</italic> infection of ISE6 tick cells (Figure <xref ref-type="fig" rid="F6">6A</xref>), a result that agreed with previous results of transcriptomics analysis (Villar et al., <xref ref-type="bibr" rid="B78">2015a</xref>; Figure <xref ref-type="fig" rid="F6">6B</xref>). The IFA in uninfected and <italic>A. phagocytophilum</italic>-infected <italic>I. scapularis</italic> females showed that as expected, a negative and positive staining was obtained with pre-immune and anti-ISE6 IgG in infected ticks, respectively (Figures <xref ref-type="fig" rid="F6">6Ca&#x02013;d</xref>). The ISCW017271 antigen, which protein levels were highly under-represented in response to infection in both midguts and salivary glands (Figure <xref ref-type="fig" rid="F3">3A</xref>), was used to validate proteomics results. The IFA using anti-ISCW017271 IgG antibodies showed a positive staining in uninfected (Figure <xref ref-type="fig" rid="F6">6Ce</xref>) but not infected cells (Figure <xref ref-type="fig" rid="F6">6Cf</xref>), thus corroborating the proteomics results. For the selected candidate tick protective antigens, the IFA with anti-ISCW005600 IgG did not produce any positive staining (Figures <xref ref-type="fig" rid="F6">6Cg&#x02013;h</xref>), in accordance with proteomics results (Figure <xref ref-type="fig" rid="F3">3A</xref>). However, for the AAY66632 antigen, a positive staining was obtained in salivary glands from infected ticks after IFA with anti-AAY66632 antibodies (Figures <xref ref-type="fig" rid="F6">6Ci,j</xref>). The positive staining in infected (Figure <xref ref-type="fig" rid="F6">6Cl</xref>) but not uninfected (Figure <xref ref-type="fig" rid="F6">6Ck</xref>) ticks formed a membrane-like structure in salivary glands (arrows in Figure <xref ref-type="fig" rid="F6">6Cl</xref>), and also corroborated the proteomics results for this antigen (Figure <xref ref-type="fig" rid="F3">3A</xref>).</p>
<fig id="F6" position="float">
<label>Figure 6</label>
<caption><p>Functional characterization of selected candidate tick protective antigens. <bold>(A)</bold> Results of the RT-PCR analysis of the expression of ISCW005600 and AAY66632 genes in uninfected and <italic>A. phagocytophilum</italic>-infected ISE6 tick cells. Results were presented as average &#x0002B; S.D. normalized Ct-values and compared between infected and uninfected cells by Student&#x00027;s <italic>t</italic>-test with unequal variance (<italic>P</italic> &#x02264; 0.05; <italic>N</italic> &#x0003D; 4). <bold>(B)</bold> Comparison of the transcriptomics and RT-PCR results for mRNA levels of ISCW005600 and AAY66632 genes in ISE6 tick cells in response to <italic>A. phagocytophilum</italic> infection. Transcriptomics results were obtained from Villar et al. (<xref ref-type="bibr" rid="B78">2015a</xref>). <bold>(C)</bold> Representative images of imunofluorescence analysis of uninfected <bold>(a,c,e,g,i,k)</bold> and <italic>A. phagocytophilum</italic>-infected <bold>(b,d,f,h,j,l)</bold> adult female <italic>I. scapularis</italic> midguts (MG) and salivary glands (SG). Tick tissues were stained with rabbit pre-immune control IgG <bold>(a,b)</bold>, anti-ISE6 tick cells IgG <bold>(c,d)</bold>, or anti-tick antigens IgG <bold>(e&#x02013;l)</bold> labeled with RFP (red) and DAPI (blue). Yellow arrows illustrate a positive staining for AAY66632 in the SG sections in white squares in infected <bold>(l)</bold> but not uninfected <bold>(k)</bold> ticks. <bold>(D)</bold> The <italic>A. phagocytophilum</italic> DNA levels were determined after RNAi in infected ISE6 tick cells treated with ISCW005600 and AAY66632 dsRNAs or control <italic>Rs86</italic> dsRNA. <italic>A. phagocytophilum</italic> DNA levels were determined by <italic>msp4</italic> real-time PCR normalizing against tick <italic>rpS4</italic>. Results are shown as average &#x0002B; S.D. normalized Ct-values and compared between treated and control groups by Student&#x00027;s <italic>t</italic>-test with unequal variance (<italic>P</italic> &#x0003C; 0.05; <italic>N</italic> &#x0003D; 5 biological replicates).</p></caption>
<graphic xlink:href="fcimb-07-00360-g0006.tif"/>
</fig>
<p>Gene knockdown by RNAi in ISE6 tick cells resulted in significantly lower <italic>A. phagocytophilum</italic> infection levels for both antigens when compared to control cells using the unrelated Rs86 dsRNA (Figure <xref ref-type="fig" rid="F6">6D</xref>). These results suggested that although ISCW005600 and AAY66632 mRNA levels did not change in response to infection of ISE6 tick cells, which constitute a model for tick hemocytes involved in pathogen infection and immune response (Villar et al., <xref ref-type="bibr" rid="B78">2015a</xref>; Alberdi et al., <xref ref-type="bibr" rid="B3">2016</xref>), they may play a role in <italic>A. phagocytophilum</italic> infection.</p>
<p>These results encouraged a final experiment to evaluate the potential effect of ISCW005600 and AAY66632 as vaccination antigens to reduce tick infestations and reproduction. An artificial tick feeding system using silicone membranes was used in this experiment (Kr&#x000F6;ber and Guerin, <xref ref-type="bibr" rid="B46">2007</xref>; Krull et al., <xref ref-type="bibr" rid="B47">2017</xref>). Although the development of standardized <italic>in vitro</italic> feeding methods for ixodid ticks has been hampered by their complex feeding behavior and the long duration of their blood meal, recent developments provide a valuable tool for the study of tick physiology, tick-host-pathogen interactions and the discovery of drugs and other control interventions without the use of experimental animals (Kr&#x000F6;ber and Guerin, <xref ref-type="bibr" rid="B46">2007</xref>; Bonnet and Liu, <xref ref-type="bibr" rid="B13">2012</xref>; Sojka et al., <xref ref-type="bibr" rid="B67">2015</xref>; Tajeri et al., <xref ref-type="bibr" rid="B70">2016</xref>; Krull et al., <xref ref-type="bibr" rid="B47">2017</xref>; Trentelman et al., <xref ref-type="bibr" rid="B72">2017</xref>). <italic>I. ricinus</italic> ticks were selected for artificial feeding and the results shown here supported an effect of antibodies against <italic>I. scapularis</italic> antigens (Figure <xref ref-type="fig" rid="F4">4B</xref>) on <italic>I. ricinus</italic> ticks (Figures <xref ref-type="fig" rid="F5">5D,E</xref>).</p>
<p>On the artificial feeding device, the number of attached ticks was similar between groups, but the number of dead ticks increased after feeding on anti-antigen IgG and was significantly higher in ticks fed on anti-AAY66632 antibodies when compared to control ticks fed on pre-immune IgG (Figure <xref ref-type="fig" rid="F7">7</xref>). Significant differences were not observed between groups in tick weight, number of ticks with oviposition and egg weight, but a tendency in the reduction in the number of ticks with oviposition was also observed in ticks fed on anti-AAY66632 IgG (Figure <xref ref-type="fig" rid="F7">7</xref>). Although the number of ticks used for artificial feeding was limited due to experimental conditions, the results suggested an effect of anti-ISCW005600 and anti-AYY66632 antibodies on tick mortality and a reduction in the number of ticks with oviposition for anti-AYY66632 antibodies.</p>
<fig id="F7" position="float">
<label>Figure 7</label>
<caption><p>Artificial tick feeding. Artificial tick feeding was conducted as previously described (Krull et al., <xref ref-type="bibr" rid="B47">2017</xref>) with 17&#x02013;19 female and 3 male <italic>I. ricinus</italic> ticks per feeding unit. Environmental conditions were set at 20&#x000B0;C, 80% relative humidity, 5% CO<sub>2</sub> and 15 h light/9 h dark. Feeding units containing partially engorged ticks were placed on a six well plate and ticks were fed for 36 h with blood supplemented with 1 mg/ml of pre-immune or antigen-specific purified IgG. Dead and detached engorged ticks were removed, and engorged females that detached were weighed and stored individually in 2 ml Eppendorf tubes with pierced lids, which were kept in desiccators with approximately 90% relative humidity at RT. Ticks were assessed for egg mass 8 weeks post-feeding. The number of dead/fed ticks and thus with oviposition were compared between groups by a Fisher&#x00027;s exact test (<sup>&#x0002A;</sup><italic>P</italic> &#x0003D; 0.02).</p></caption>
<graphic xlink:href="fcimb-07-00360-g0007.tif"/>
</fig>
<p>These results suggested that the selected candidate tick protective antigens might constitute effective vaccine antigens to control tick vector infestations and prevent or control pathogen infection, and therefore could be selected for future vaccination trials.</p>
</sec>
<sec>
<title>Putative mechanisms of protection for vaccines based on selected candidate tick protective antigens</title>
<p>After the successful completion of the main objective of this study, which was the identification of tick candidate tick protective antigens for the control of vector infestations and <italic>A. phagocytophilum</italic> infection, a question arose about the putative protective mechanisms of the selected candidate protective antigens. The answer to this question may assist in the selection of additional candidate protective antigens following the vaccinomics pipeline (Figure <xref ref-type="fig" rid="F1">1</xref>), and the evaluation of possible combinations of antigens with different functions to enhance vaccine efficacy (de la Fuente and Merino, <xref ref-type="bibr" rid="B32">2013</xref>).</p>
<p>Both selected candidate tick protective antigens were grouped into the evasion of host defense response BP (Figure <xref ref-type="fig" rid="F3">3B</xref>). The ISCW005600 secreted histamine binding protein appears to be a salivary lipocalin (Beaufays et al., <xref ref-type="bibr" rid="B11">2008</xref>; Schwarz et al., <xref ref-type="bibr" rid="B64">2013</xref>). Lipocalins are a family of salivary gland secreted proteins that play a role in evasion of host immune and inflammatory responses by competing for histamine or serotonin binding (Paesen et al., <xref ref-type="bibr" rid="B58">2000</xref>; Mans, <xref ref-type="bibr" rid="B52">2005</xref>; Beaufays et al., <xref ref-type="bibr" rid="B11">2008</xref>; Vald&#x000E9;s, <xref ref-type="bibr" rid="B75">2014</xref>; Vald&#x000E9;s et al., <xref ref-type="bibr" rid="B76">2016</xref>). Therefore, these proteins play an important role during tick feeding. The genes encoding for these proteins are up-regulated during tick feeding (Kim et al., <xref ref-type="bibr" rid="B43">2016</xref>; Vald&#x000E9;s et al., <xref ref-type="bibr" rid="B76">2016</xref>; Ribeiro et al., <xref ref-type="bibr" rid="B60">2017</xref>) and pathogen infection (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>; Vald&#x000E9;s et al., <xref ref-type="bibr" rid="B76">2016</xref>). Additionally, lipocalins were also produced in tick midguts and up-regulated in response to <italic>A. phagocytophilum</italic> infection (Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>; Figure <xref ref-type="fig" rid="F3">3A</xref>), suggesting as reported in other organisms (Cassidy and Martineau, <xref ref-type="bibr" rid="B17">2014</xref>; Abella et al., <xref ref-type="bibr" rid="B1">2015</xref>) a role for these proteins in tick innate immune response to infection. Therefore, lipocalins may have a dual role in tick-pathogen interactions. These proteins may facilitate pathogen transmission by reducing host inflammatory responses (Vald&#x000E9;s et al., <xref ref-type="bibr" rid="B76">2016</xref>), but control tick infection by depleting strategic compounds for pathogens (Ferreira et al., <xref ref-type="bibr" rid="B36">2015</xref>). In humans, lipocalins have also been shown to regulate apoptosis by inducing or inhibiting this process under different physiological conditions (Chakraborty et al., <xref ref-type="bibr" rid="B18">2012</xref>; Abella et al., <xref ref-type="bibr" rid="B1">2015</xref>). Based on the results obtained here with anti-ISCW005600 antibodies and RNAi (Figures <xref ref-type="fig" rid="F5">5A,B,D,E</xref>, <xref ref-type="fig" rid="F6">6D</xref>, <xref ref-type="fig" rid="F7">7</xref>), ISCW005600 may function to inhibit tick cell apoptosis and facilitate <italic>A. phagocytophilum</italic> infection with a possible role during tick feeding (Figure <xref ref-type="fig" rid="F7">7</xref>). Therefore, the proposed protective mechanisms for vaccines containing this antigen may include reduction of tick infestations by increasing cell apoptosis and reducing protective capacity to host response while reducing pathogen infection and transmission. Tick lipocalins have been proposed before as vaccine antigens for the control of tick infestations (de Castro et al., <xref ref-type="bibr" rid="B25">2016</xref>; Manzano-Rom&#x000E1;n et al., <xref ref-type="bibr" rid="B53">2016</xref>), but only low partial protection have been reported in soft ticks, <italic>Ornithodoros moubata</italic> fed on immunized rabbits (Manzano-Rom&#x000E1;n et al., <xref ref-type="bibr" rid="B53">2016</xref>).</p>
<p>The AAY66632 antigen is a secreted lectin pathway inhibitor (Ribeiro et al., <xref ref-type="bibr" rid="B59">2006</xref>; Schuijt et al., <xref ref-type="bibr" rid="B62">2011</xref>), which is involved in the inhibition of the innate immune response complement lectin pathway (CLP). The CLP is involved in host response to infection with different pathogens (Evans-Osses et al., <xref ref-type="bibr" rid="B35">2013</xref>). The CLP is activated when mannan-binding lectins or ficolins bind to patterns of carbohydrates or acetyl groups on the surface of protozoan, virus, fungi, or bacteria (Runza et al., <xref ref-type="bibr" rid="B61">2008</xref>; H&#x000E9;ja et al., <xref ref-type="bibr" rid="B42">2012</xref>; Evans-Osses et al., <xref ref-type="bibr" rid="B35">2013</xref>). In ticks, the inhibition of the complement system during and after blood feeding is critical for tick feeding success and development by minimizing damage to the intestinal epithelium as well as avoiding inflammation and opsonization of salivary molecules at the bite site (Wikel and Allen, <xref ref-type="bibr" rid="B85">1977</xref>; Franco et al., <xref ref-type="bibr" rid="B38">2016</xref>). Therefore, complement inhibitors are present in both tick saliva and midgut (Barros et al., <xref ref-type="bibr" rid="B10">2009</xref>; Mendes-Sousa et al., <xref ref-type="bibr" rid="B54">2013</xref>; Ayll&#x000F3;n et al., <xref ref-type="bibr" rid="B8">2015</xref>) (Figure <xref ref-type="fig" rid="F3">3A</xref>). The presence and activity of salivary anti-complement molecules has been well characterized in <italic>Ixodes</italic> spp. ticks including the <italic>A. phagocytophilum</italic> vectors, <italic>I. scapularis</italic> (Valenzuela et al., <xref ref-type="bibr" rid="B77">2000</xref>; Tyson et al., <xref ref-type="bibr" rid="B73">2007</xref>, <xref ref-type="bibr" rid="B74">2008</xref>, Schuijt et al., <xref ref-type="bibr" rid="B62">2011</xref>) and <italic>I. ricinus</italic> (Lawrie et al., <xref ref-type="bibr" rid="B49">1999</xref>, <xref ref-type="bibr" rid="B50">2005</xref>, Daix et al., <xref ref-type="bibr" rid="B24">2007</xref>; Couvreur et al., <xref ref-type="bibr" rid="B22">2008</xref>). Moreover, tick lectin pathway inhibitors have been shown to facilitate <italic>Borrelia burgdorferi</italic> pathogen infection and transmission (Schuijt et al., <xref ref-type="bibr" rid="B62">2011</xref>; Wagemakers et al., <xref ref-type="bibr" rid="B83">2016</xref>). Our results supported a role for AAY66632 in tick feeding success (Figure <xref ref-type="fig" rid="F7">7</xref>), the inhibition of tick cell apoptosis (Figures <xref ref-type="fig" rid="F5">5A,D</xref>) and facilitation of <italic>A. phagocytophilum</italic> infection (Figures <xref ref-type="fig" rid="F5">5B,E</xref>, <xref ref-type="fig" rid="F6">6D</xref>). Therefore, the proposed protective mechanisms for vaccines based on this antigen may include reduction of tick infestations by affecting tick attachment and/or feeding, while reducing pathogen infection and transmission. The protective capacity of vaccines containing this antigen has not been reported.</p>
</sec>
</sec>
<sec sec-type="conclusions" id="s4">
<title>Conclusions</title>
<p>The main objective of this study was to apply a vaccinomics approach to the identification and characterization of candidate tick protective antigens for the control of vector infestations and <italic>A. phagocytophilum</italic> infection. The vaccinomics pipeline developed in this study was applied to tick-<italic>A. phagocytophilum</italic> interactions and resulted in the identification of two candidate tick protective antigens that could be selected for future vaccination trials. The results showed that <italic>I. scapularis</italic> ISCW005600 and AAY66632 and <italic>I. ricinus</italic> homologs constitute candidate protective antigens for the control of vector infestations and <italic>A. phagocytophilum</italic> infection. Both lipocalin (ISCW005600) and lectin pathway inhibitor (AAY66632) are involved in the tick evasion of host defense response and pathogen infection and transmission, but targeting different immune response pathways. Therefore, based on the putative function of these antigens, vaccine protective mechanisms were proposed that supported antigen combination to improve vaccine efficacy. The vaccinomics pipeline proposed here could be used to continue the identification and characterization of candidate tick protective antigens for the development of effective vaccines for the prevention and control of HGA, TBF, and other forms of anaplasmosis caused by <italic>A. phagocytophilum</italic>.</p>
</sec>
<sec id="s5">
<title>Author contributions</title>
<p>JD conceived the study. MC, PA, IF, MV, CK, and AN performed the experiments. MC, PA, MV, CK, AN, and JD performed data analyses. JD, MC, and PA wrote the paper, and other coauthors made additional suggestions and approved the manuscript.</p>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p></sec>
</sec>
</body>
<back>
<ack><p>We thank Ulrike Munderloh (University of Minnesota, USA) and Lesley Bell-Sakyi (the Tick Cell Biobank, The Pirbright Institute; now at the Institute of Infection and Global Health, University of Liverpool, UK) for providing ISE6 and IRE/CTVM20 cell lines, respectively. Katherine M. Kocan (Oklahoma State University, USA) is acknowledged for providing tick photographs.</p>
</ack>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Abella</surname> <given-names>V.</given-names></name> <name><surname>Scotece</surname> <given-names>M.</given-names></name> <name><surname>Conde</surname> <given-names>J.</given-names></name> <name><surname>G&#x000F3;mez</surname> <given-names>R.</given-names></name> <name><surname>Lois</surname> <given-names>A.</given-names></name> <name><surname>Pino</surname> <given-names>J.</given-names></name> <etal/></person-group>. (<year>2015</year>). <article-title>The potential of lipocalin-2/NGAL as biomarker for inflammatory and metabolic diseases</article-title>. <source>Biomarkers</source> <volume>20</volume>, <fpage>565</fpage>&#x02013;<lpage>571</lpage>. <pub-id pub-id-type="doi">10.3109/1354750X.2015.1123354</pub-id><pub-id pub-id-type="pmid">26671823</pub-id></citation></ref>
<ref id="B2">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Alberdi</surname> <given-names>P.</given-names></name> <name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Cabezas-Cruz</surname> <given-names>A.</given-names></name> <name><surname>Bell-Sakyi</surname> <given-names>L.</given-names></name> <name><surname>Zweygarth</surname> <given-names>E.</given-names></name> <name><surname>Stuen</surname> <given-names>S.</given-names></name> <etal/></person-group>. (<year>2015</year>). <article-title>Infection of <italic>Ixodes</italic> spp. tick cells with different <italic>Anaplasma phagocytophilum</italic> isolates induces the inhibition of apoptotic cell death</article-title>. <source>Ticks Tick Borne Dis.</source> <volume>6</volume>, <fpage>758</fpage>&#x02013;<lpage>767</lpage>. <pub-id pub-id-type="doi">10.1016/j.ttbdis.2015.07.001</pub-id><pub-id pub-id-type="pmid">26183310</pub-id></citation></ref>
<ref id="B3">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Alberdi</surname> <given-names>P.</given-names></name> <name><surname>Mansfield</surname> <given-names>K. L.</given-names></name> <name><surname>Manzano-Rom&#x000E1;n</surname> <given-names>R.</given-names></name> <name><surname>Cook</surname> <given-names>C.</given-names></name> <name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <etal/></person-group>. (<year>2016</year>). <article-title>Tissue-specific signatures in the transcriptional response to <italic>Anaplasma phagocytophilum</italic> infection of <italic>Ixodes scapularis</italic> and <italic>Ixodes ricinus</italic> tick cell lines</article-title>. <source>Front. Cell. Infect. Microbiol.</source> <volume>6</volume>:<fpage>20</fpage>. <pub-id pub-id-type="doi">10.3389/fcimb.2016.00020</pub-id><pub-id pub-id-type="pmid">26904518</pub-id></citation></ref>
<ref id="B4">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Altschul</surname> <given-names>S. F.</given-names></name> <name><surname>Gish</surname> <given-names>W.</given-names></name> <name><surname>Miller</surname> <given-names>W.</given-names></name> <name><surname>Myers</surname> <given-names>E. W.</given-names></name> <name><surname>Lipman</surname> <given-names>D. J.</given-names></name></person-group> (<year>1990</year>). <article-title>Basic local alignment search tool</article-title>. <source>J. Mol. Biol.</source> <volume>215</volume>, <fpage>403</fpage>&#x02013;<lpage>410</lpage>. <pub-id pub-id-type="doi">10.1016/S0022-2836(05)80360-2</pub-id><pub-id pub-id-type="pmid">2231712</pub-id></citation></ref>
<ref id="B5">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Antunes</surname> <given-names>S.</given-names></name> <name><surname>Merino</surname> <given-names>O.</given-names></name> <name><surname>Mosqueda</surname> <given-names>J.</given-names></name> <name><surname>Moreno-Cid</surname> <given-names>J. A.</given-names></name> <name><surname>Bell-Sakyi</surname> <given-names>L.</given-names></name> <name><surname>Fragkoudis</surname> <given-names>R.</given-names></name> <etal/></person-group>. (<year>2014</year>). <article-title>Tick capillary feeding for the study of proteins involved in tick-pathogen interactions as potential antigens for the control of tick infestation and pathogen infection</article-title>. <source>Parasit. Vectors</source> <volume>7</volume>:<fpage>42</fpage>. <pub-id pub-id-type="doi">10.1186/1756-3305-7-42</pub-id><pub-id pub-id-type="pmid">24450836</pub-id></citation></ref>
<ref id="B6">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Asanovich</surname> <given-names>K. M.</given-names></name> <name><surname>Bakken</surname> <given-names>J. S.</given-names></name> <name><surname>Madigan</surname> <given-names>J. E.</given-names></name> <name><surname>Aguero-Rosenfeld</surname> <given-names>M.</given-names></name> <name><surname>Wormser</surname> <given-names>G. P.</given-names></name> <name><surname>Dumler</surname> <given-names>J. S.</given-names></name></person-group> (<year>1997</year>). <article-title>Antigenic diversity of granulocytic <italic>Ehrlichia</italic> isolates from humans in Wisconsin and New York and a horse in California</article-title>. <source>J. Infect. Dis.</source> <volume>176</volume>, <fpage>1029</fpage>&#x02013;<lpage>1034</lpage>. <pub-id pub-id-type="doi">10.1086/516529</pub-id><pub-id pub-id-type="pmid">9333162</pub-id></citation></ref>
<ref id="B7">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Busby</surname> <given-names>A. T.</given-names></name> <name><surname>Kocan</surname> <given-names>K. M.</given-names></name> <name><surname>Blouin</surname> <given-names>E. F.</given-names></name> <name><surname>Bonz&#x000F3;n-Kulichenko</surname> <given-names>E.</given-names></name> <etal/></person-group>. (<year>2013</year>). <article-title><italic>Anaplasma phagocytophilum</italic> inhibits apoptosis and promotes cytoskeleton rearrangement for infection of tick cells</article-title>. <source>Infect. Immun.</source> <volume>81</volume>, <fpage>2415</fpage>&#x02013;<lpage>2425</lpage>. <pub-id pub-id-type="doi">10.1128/IAI.00194-13</pub-id><pub-id pub-id-type="pmid">23630955</pub-id></citation></ref>
<ref id="B8">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Galindo</surname> <given-names>R. C.</given-names></name> <name><surname>Kocan</surname> <given-names>K. M.</given-names></name> <name><surname>&#x00160;&#x000ED;ma</surname> <given-names>R.</given-names></name> <name><surname>L&#x000F3;pez</surname> <given-names>J. A.</given-names></name> <etal/></person-group>. (<year>2015</year>). <article-title>Systems biology of tissue-specific response to <italic>Anaplasma phagocytophilum</italic> reveals differentiated apoptosis in the tick vector <italic>Ixodes scapularis</italic></article-title>. <source>PLoS Genet.</source> <volume>11</volume>:<fpage>e1005120</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pgen.1005120</pub-id><pub-id pub-id-type="pmid">25815810</pub-id></citation></ref>
<ref id="B9">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bakken</surname> <given-names>J. S.</given-names></name> <name><surname>Dumler</surname> <given-names>J. S.</given-names></name></person-group> (<year>2015</year>). <article-title>Human granulocytic anaplasmosis</article-title>. <source>Infect. Dis. Clin. North Am.</source> <volume>29</volume>, <fpage>341</fpage>&#x02013;<lpage>355</lpage>. <pub-id pub-id-type="doi">10.1016/j.idc.2015.02.007</pub-id><pub-id pub-id-type="pmid">25999228</pub-id></citation></ref>
<ref id="B10">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Barros</surname> <given-names>V. C.</given-names></name> <name><surname>Assumpcao</surname> <given-names>J. G.</given-names></name> <name><surname>Cadete</surname> <given-names>A. M.</given-names></name> <name><surname>Santos</surname> <given-names>V. C.</given-names></name> <name><surname>Cavalcante</surname> <given-names>R. R.</given-names></name> <name><surname>Araujo</surname> <given-names>R. N.</given-names></name> <etal/></person-group>. (<year>2009</year>). <article-title>The role of salivary and intestinal complement system inhibitors in the midgut protection of triatomines and mosquitoes</article-title>. <source>PLoS ONE</source> <volume>4</volume>:<fpage>e6047</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pone.0006047</pub-id><pub-id pub-id-type="pmid">19557176</pub-id></citation></ref>
<ref id="B11">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Beaufays</surname> <given-names>J.</given-names></name> <name><surname>Adam</surname> <given-names>B.</given-names></name> <name><surname>Decrem</surname> <given-names>Y.</given-names></name> <name><surname>Prevot</surname> <given-names>P. P.</given-names></name> <name><surname>Santini</surname> <given-names>S.</given-names></name> <name><surname>Brasseur</surname> <given-names>R.</given-names></name> <etal/></person-group>. (<year>2008</year>). <article-title><italic>Ixodes ricinus</italic> tick lipocalins: identification, cloning, phylogenetic analysis and biochemical characterization</article-title>. <source>PLoS ONE</source> <volume>3</volume>:<fpage>e3941</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pone.0003941</pub-id><pub-id pub-id-type="pmid">19096708</pub-id></citation></ref>
<ref id="B12">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bell-Sakyi</surname> <given-names>L.</given-names></name> <name><surname>Zweygarth</surname> <given-names>E.</given-names></name> <name><surname>Blouin</surname> <given-names>E. F.</given-names></name> <name><surname>Gould</surname> <given-names>E. A.</given-names></name> <name><surname>Jongejan</surname> <given-names>F.</given-names></name></person-group> (<year>2007</year>). <article-title>Tick cell lines: tools for tick and tick-borne disease research</article-title>. <source>Trends Parasitol.</source> <volume>23</volume>, <fpage>450</fpage>&#x02013;<lpage>457</lpage>. <pub-id pub-id-type="doi">10.1016/j.pt.2007.07.009</pub-id><pub-id pub-id-type="pmid">17662657</pub-id></citation></ref>
<ref id="B13">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bonnet</surname> <given-names>S.</given-names></name> <name><surname>Liu</surname> <given-names>X. Y.</given-names></name></person-group> (<year>2012</year>). <article-title>Laboratory artificial infection of hard ticks: a tool for the analysis of tick-borne pathogen transmission</article-title>. <source>Acarologia.</source> <volume>52</volume>, <fpage>453</fpage>&#x02013;<lpage>464</lpage>. <pub-id pub-id-type="doi">10.1051/acarologia/20122068</pub-id></citation></ref>
<ref id="B14">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cabezas-Cruz</surname> <given-names>A.</given-names></name> <name><surname>Alberdi</surname> <given-names>P.</given-names></name> <name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Vald&#x000E9;s</surname> <given-names>J. J.</given-names></name> <name><surname>Pierce</surname> <given-names>R.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <etal/></person-group>. (<year>2016</year>). <article-title><italic>Anaplasma phagocytophilum</italic> increases the levels of histone modifying enzymes to inhibit cell apoptosis and facilitate pathogen infection in the tick vector <italic>Ixodes scapularis</italic></article-title>. <source>Epigenetics</source> <volume>11</volume>, <fpage>303</fpage>&#x02013;<lpage>319</lpage>. <pub-id pub-id-type="doi">10.1080/15592294.2016.1163460</pub-id><pub-id pub-id-type="pmid">27019326</pub-id></citation></ref>
<ref id="B15">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cabezas-Cruz</surname> <given-names>A.</given-names></name> <name><surname>Alberdi</surname> <given-names>P.</given-names></name> <name><surname>Vald&#x000E9;s</surname> <given-names>J. J.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>de la Fuente</surname> <given-names>J.</given-names></name></person-group> (<year>2017a</year>). <article-title><italic>Anaplasma phagocytophilum</italic> infection subverts carbohydrate metabolic pathways in the tick vector, <italic>Ixodes scapularis</italic></article-title>. <source>Front. Cell. Infect. Microbiol.</source> <volume>7</volume>:<fpage>23</fpage>. <pub-id pub-id-type="doi">10.3389/fcimb.2017.00023</pub-id><pub-id pub-id-type="pmid">28229048</pub-id></citation></ref>
<ref id="B16">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cabezas-Cruz</surname> <given-names>A.</given-names></name> <name><surname>Alberdi</surname> <given-names>P.</given-names></name> <name><surname>Vald&#x000E9;s</surname> <given-names>J. J.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>de la Fuente</surname> <given-names>J.</given-names></name></person-group> (<year>2017b</year>). <article-title>Remodeling of tick cytoskeleton in response to infection with <italic>Anaplasma phagocytophilum</italic></article-title>. <source>Front. Biosci.</source> <volume>22</volume>, <fpage>1830</fpage>&#x02013;<lpage>1844</lpage>. <pub-id pub-id-type="pmid">28410148</pub-id></citation></ref>
<ref id="B17">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cassidy</surname> <given-names>J. P.</given-names></name> <name><surname>Martineau</surname> <given-names>A. R.</given-names></name></person-group> (<year>2014</year>). <article-title>Innate resistance to tuberculosis in man, cattle and laboratory animal models: nipping disease in the bud?</article-title> <source>J. Comp. Pathol.</source> <volume>151</volume>, <fpage>291</fpage>&#x02013;<lpage>308</lpage>. <pub-id pub-id-type="doi">10.1016/j.jcpa.2014.08.001</pub-id><pub-id pub-id-type="pmid">25246179</pub-id></citation></ref>
<ref id="B18">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chakraborty</surname> <given-names>S.</given-names></name> <name><surname>Kaur</surname> <given-names>S.</given-names></name> <name><surname>Guha</surname> <given-names>S.</given-names></name> <name><surname>Batra</surname> <given-names>S. K.</given-names></name></person-group> (<year>2012</year>). <article-title>The multifaceted roles of neutrophil gelatinase associated lipocalin (NGAL) in inflammation and cancer</article-title>. <source>Biochim. Biophys. Acta</source> <volume>1826</volume>, <fpage>129</fpage>&#x02013;<lpage>169</lpage>. <pub-id pub-id-type="doi">10.1016/j.bbcan.2012.03.008</pub-id><pub-id pub-id-type="pmid">22513004</pub-id></citation></ref>
<ref id="B19">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chmela&#x00159;</surname> <given-names>J.</given-names></name> <name><surname>Kot&#x000E1;l</surname> <given-names>J.</given-names></name> <name><surname>Karim</surname> <given-names>S.</given-names></name> <name><surname>Kopacek</surname> <given-names>P.</given-names></name> <name><surname>Francischetti</surname> <given-names>I. M.</given-names></name> <name><surname>Pedra</surname> <given-names>J. H.</given-names></name> <etal/></person-group>. (<year>2016</year>). <article-title>Sialomes and mialomes: a systems-biology view of tick tissues and tick-host interactions</article-title>. <source>Trends Parasitol.</source> <volume>32</volume>, <fpage>242</fpage>&#x02013;<lpage>254</lpage>. <pub-id pub-id-type="doi">10.1016/j.pt.2015.10.002</pub-id><pub-id pub-id-type="pmid">26520005</pub-id></citation></ref>
<ref id="B20">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Contreras</surname> <given-names>M.</given-names></name> <name><surname>Alberdi</surname> <given-names>P.</given-names></name> <name><surname>Mateos-Hern&#x000E1;ndez</surname> <given-names>L.</given-names></name> <name><surname>Fern&#x000E1;ndez de Mera</surname> <given-names>I. G.</given-names></name> <name><surname>Garc&#x000ED;a-P&#x000E9;rez</surname> <given-names>A. L.</given-names></name> <etal/></person-group>. (<year>2017</year>). <article-title><italic>Anaplasma phagocytophilum</italic> MSP4 and HSP70 proteins are involved in interactions with host cells during pathogen infection</article-title>. <source>Front. Cell. Infect. Microbiol.</source> <volume>7</volume>:<fpage>307</fpage>. <pub-id pub-id-type="doi">10.3389/fcimb.2017.00307</pub-id><pub-id pub-id-type="pmid">28725639</pub-id></citation></ref>
<ref id="B21">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Contreras</surname> <given-names>M.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Alberdi</surname> <given-names>P.</given-names></name> <name><surname>de la Fuente</surname> <given-names>J.</given-names></name></person-group> (<year>2016</year>). <article-title>Vaccinomics approach to tick vaccine development</article-title>. <source>Methods Mol. Biol.</source> <volume>1404</volume>, <fpage>275</fpage>&#x02013;<lpage>286</lpage>. <pub-id pub-id-type="doi">10.1007/978-1-4939-3389-1_19</pub-id><pub-id pub-id-type="pmid">27076305</pub-id></citation></ref>
<ref id="B22">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Couvreur</surname> <given-names>B.</given-names></name> <name><surname>Beaufays</surname> <given-names>J.</given-names></name> <name><surname>Charon</surname> <given-names>C.</given-names></name> <name><surname>Lahaye</surname> <given-names>K.</given-names></name> <name><surname>Gensale</surname> <given-names>F.</given-names></name> <name><surname>Denis</surname> <given-names>V.</given-names></name> <etal/></person-group>. (<year>2008</year>). <article-title>Variability and action mechanism of a family of anticomplement proteins in <italic>Ixodes ricinus</italic></article-title>. <source>PLoS ONE</source> <volume>3</volume>:<fpage>e1400</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pone.0001400</pub-id><pub-id pub-id-type="pmid">18167559</pub-id></citation></ref>
<ref id="B23">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cramaro</surname> <given-names>W. J.</given-names></name> <name><surname>Revets</surname> <given-names>D.</given-names></name> <name><surname>Hunewald</surname> <given-names>O. E.</given-names></name> <name><surname>Sinner</surname> <given-names>R.</given-names></name> <name><surname>Reye</surname> <given-names>A. L.</given-names></name> <name><surname>Muller</surname> <given-names>C. P.</given-names></name></person-group> (<year>2015</year>). <article-title>Integration of <italic>Ixodes ricinus</italic> genome sequencing with transcriptome and proteome annotation of the na&#x000EF;ve midgut</article-title>. <source>BMC Genomics</source> 1<volume>6</volume>:<fpage>871</fpage>. <pub-id pub-id-type="doi">10.1186/s12864-015-1981-7</pub-id></citation></ref>
<ref id="B24">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Daix</surname> <given-names>V.</given-names></name> <name><surname>Schroeder</surname> <given-names>H.</given-names></name> <name><surname>Praet</surname> <given-names>N.</given-names></name> <name><surname>Georgin</surname> <given-names>J. P.</given-names></name> <name><surname>Chiappino</surname> <given-names>I.</given-names></name> <name><surname>Gillet</surname> <given-names>L.</given-names></name> <etal/></person-group>. (<year>2007</year>). <article-title><italic>Ixodes</italic> ticks belonging to the <italic>Ixodes ricinus</italic> complex encode a family of anticomplement proteins</article-title>. <source>Insect Mol. Biol.</source> <volume>16</volume>, <fpage>155</fpage>&#x02013;<lpage>166</lpage>. <pub-id pub-id-type="doi">10.1111/j.1365-2583.2006.00710.x</pub-id><pub-id pub-id-type="pmid">17298559</pub-id></citation></ref>
<ref id="B25">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>de Castro</surname> <given-names>M. H.</given-names></name> <name><surname>de Klerk</surname> <given-names>D.</given-names></name> <name><surname>Pienaar</surname> <given-names>R.</given-names></name> <name><surname>Latif</surname> <given-names>A. A.</given-names></name> <name><surname>Rees</surname> <given-names>D. J.</given-names></name> <name><surname>Mans</surname> <given-names>B. J.</given-names></name></person-group> (<year>2016</year>). <article-title>De novo assembly and annotation of the salivary gland transcriptome of <italic>Rhipicephalus appendiculatus</italic> male and female ticks during blood feeding</article-title>. <source>Ticks Tick Borne Dis.</source> <volume>7</volume>, <fpage>536</fpage>&#x02013;<lpage>548</lpage>. <pub-id pub-id-type="doi">10.1016/j.ttbdis.2016.01.014</pub-id><pub-id pub-id-type="pmid">26830274</pub-id></citation></ref>
<ref id="B26">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>de la Fuente</surname> <given-names>J.</given-names></name> <name><surname>Antunes</surname> <given-names>S.</given-names></name> <name><surname>Bonnet</surname> <given-names>S.</given-names></name> <name><surname>Cabezas-Cruz</surname> <given-names>A.</given-names></name> <name><surname>Domingos</surname> <given-names>A.</given-names></name> <name><surname>Estrada-Pe&#x000F1;a</surname> <given-names>A.</given-names></name> <etal/></person-group>. (<year>2017</year>). <article-title>Tick-pathogen interactions and vector competence: identification of molecular drivers for tick-borne diseases</article-title>. <source>Front. Cell. Infect. Microbiol.</source> <volume>7</volume>:<fpage>114</fpage>. <pub-id pub-id-type="doi">10.3389/fcimb.2017.00114</pub-id><pub-id pub-id-type="pmid">28439499</pub-id></citation></ref>
<ref id="B27">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>de la Fuente</surname> <given-names>J.</given-names></name> <name><surname>Contreras</surname> <given-names>M.</given-names></name></person-group> (<year>2015</year>). <article-title>Tick vaccines: current status and future directions</article-title>. <source>Expert Rev. Vaccines.</source> <volume>14</volume>, <fpage>1367</fpage>&#x02013;<lpage>1376</lpage>. <pub-id pub-id-type="doi">10.1586/14760584.2015.1076339</pub-id><pub-id pub-id-type="pmid">26289976</pub-id></citation></ref>
<ref id="B28">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>de la Fuente</surname> <given-names>J.</given-names></name> <name><surname>Kop&#x000E1;&#x0010D;ek</surname> <given-names>P.</given-names></name> <name><surname>Lew-Tabor</surname> <given-names>A.</given-names></name> <name><surname>Maritz-Olivier</surname> <given-names>C.</given-names></name></person-group> (<year>2016a</year>). <article-title>Strategies for new and improved vaccines against ticks and tick-borne diseases</article-title>. <source>Parasite Immunol.</source> <volume>38</volume>, <fpage>754</fpage>&#x02013;<lpage>769</lpage>. <pub-id pub-id-type="doi">10.1111/pim.12339</pub-id><pub-id pub-id-type="pmid">27203187</pub-id></citation></ref>
<ref id="B29">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>de la Fuente</surname> <given-names>J.</given-names></name> <name><surname>Waterhouse</surname> <given-names>R. M.</given-names></name> <name><surname>Sonenshine</surname> <given-names>D. E.</given-names></name> <name><surname>Roe</surname> <given-names>R. M.</given-names></name> <name><surname>Ribeiro</surname> <given-names>J. M.</given-names></name> <etal/></person-group>. (<year>2016b</year>). <article-title>Tick genome assembled: new opportunities for research on tick-host-pathogen interactions</article-title>. <source>Front. Cell. Infect. Microbiol.</source> <volume>6</volume>:<fpage>103</fpage>. <pub-id pub-id-type="doi">10.3389/fcimb.2016.00103</pub-id><pub-id pub-id-type="pmid">27695689</pub-id></citation></ref>
<ref id="B30">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>de la Fuente</surname> <given-names>J.</given-names></name> <name><surname>Estrada-Pe&#x000F1;a</surname> <given-names>A.</given-names></name> <name><surname>Cabezas-Cruz</surname> <given-names>A.</given-names></name> <name><surname>Kocan</surname> <given-names>K. M.</given-names></name></person-group> (<year>2016c</year>). <article-title><italic>Anaplasma phagocytophilum</italic> uses common strategies for infection of ticks and vertebrate hosts</article-title>. <source>Trends. Microbiol.</source> <volume>24</volume>, <fpage>173</fpage>&#x02013;<lpage>180</lpage>. <pub-id pub-id-type="doi">10.1016/j.tim.2015.12.001</pub-id><pub-id pub-id-type="pmid">26718986</pub-id></citation></ref>
<ref id="B31">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>de la Fuente</surname> <given-names>J.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Cabezas-Cruz</surname> <given-names>A.</given-names></name> <name><surname>Estrada-Pe&#x000F1;a</surname> <given-names>A.</given-names></name> <name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Alberdi</surname> <given-names>P.</given-names></name></person-group> (<year>2016d</year>). <article-title>Tick-host-pathogen interactions: conflict and cooperation</article-title>. <source>PLoS. Pathog.</source> <volume>12</volume>:<fpage>e1005488</fpage>. <pub-id pub-id-type="doi">10.1371/journal.ppat.1005488</pub-id><pub-id pub-id-type="pmid">27099928</pub-id></citation></ref>
<ref id="B32">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>de la Fuente</surname> <given-names>J.</given-names></name> <name><surname>Merino</surname> <given-names>O.</given-names></name></person-group> (<year>2013</year>). <article-title>Vaccinomics, the new road to tick vaccines</article-title>. <source>Vaccine</source> <volume>31</volume>, <fpage>5923</fpage>&#x02013;<lpage>5929</lpage>. <pub-id pub-id-type="doi">10.1016/j.vaccine.2013.10.049</pub-id><pub-id pub-id-type="pmid">24396872</pub-id></citation></ref>
<ref id="B33">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Dugat</surname> <given-names>T.</given-names></name> <name><surname>Lagr&#x000E9;e</surname> <given-names>A. C.</given-names></name> <name><surname>Maillard</surname> <given-names>R.</given-names></name> <name><surname>Boulouis</surname> <given-names>H. J.</given-names></name> <name><surname>Haddad</surname> <given-names>N.</given-names></name></person-group> (<year>2015</year>). <article-title>Opening the black box of <italic>Anaplasma phagocytophilum</italic> diversity: current situation and future perspectives</article-title>. <source>Front. Cell. Infect. Microbiol.</source> <volume>5</volume>:<fpage>61</fpage>. <pub-id pub-id-type="doi">10.3389/fcimb.2015.00061</pub-id><pub-id pub-id-type="pmid">26322277</pub-id></citation></ref>
<ref id="B34">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Dumler</surname> <given-names>J. S.</given-names></name> <name><surname>Barbet</surname> <given-names>A. C.</given-names></name> <name><surname>Bekker</surname> <given-names>C. P. J.</given-names></name> <name><surname>Dasch</surname> <given-names>G. A.</given-names></name> <name><surname>Palmer</surname> <given-names>G. H.</given-names></name> <name><surname>Ray</surname> <given-names>S. C.</given-names></name> <etal/></person-group>. (<year>2001</year>). <article-title>Reorganization of the genera in the families Rickettsiaceae and Anaplasmataceae in the order Rickettsiales: unification of some species of <italic>Ehrlichia</italic> with <italic>Anaplasma, Cowdria</italic> with <italic>Ehrlichia</italic> and <italic>Ehrlichia</italic> with <italic>Neorickettsia</italic>, descriptions subjective synonyms of <italic>Ehrlichia phagocytophila</italic></article-title>. <source>Int. J. Syst. Evol. Microbiol.</source> <volume>51</volume>, <fpage>2145</fpage>&#x02013;<lpage>2165</lpage>. <pub-id pub-id-type="doi">10.1099/00207713-51-6-2145</pub-id><pub-id pub-id-type="pmid">11760958</pub-id></citation></ref>
<ref id="B35">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Evans-Osses</surname> <given-names>I.</given-names></name> <name><surname>de Messias-Reason</surname> <given-names>I.</given-names></name> <name><surname>Ramirez</surname> <given-names>M. I.</given-names></name></person-group> (<year>2013</year>). <article-title>The emerging role of complement lectin pathway in trypanosomatids: molecular bases in activation, genetic deficiencies, susceptibility to infection, and complement system-based therapeutics</article-title>. <source>Sci. World J.</source> 201<volume>3</volume>:<fpage>675898</fpage>. <pub-id pub-id-type="doi">10.1155/2013/675898</pub-id></citation></ref>
<ref id="B36">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ferreira</surname> <given-names>A. C.</given-names></name> <name><surname>D&#x000E1; Mesquita</surname> <given-names>S.</given-names></name> <name><surname>Sousa</surname> <given-names>J. C.</given-names></name> <name><surname>Correia-Neves</surname> <given-names>M.</given-names></name> <name><surname>Sousa</surname> <given-names>N.</given-names></name> <name><surname>Palha</surname> <given-names>J. A.</given-names></name> <etal/></person-group>. (<year>2015</year>). <article-title>From the periphery to the brain: Lipocalin-2, a friend or foe?</article-title> <source>Prog Neurobiol.</source> <volume>131</volume>, <fpage>120</fpage>&#x02013;<lpage>136</lpage>. <pub-id pub-id-type="doi">10.1016/j.pneurobio.2015.06.005</pub-id></citation></ref>
<ref id="B37">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Foggie</surname> <given-names>A.</given-names></name></person-group> (<year>1951</year>). <article-title>Studies on the infectious agent of tick-borne fever in sheep</article-title>. <source>J. Path. Bact.</source> <volume>63</volume>, <fpage>1</fpage>&#x02013;<lpage>15</lpage>. <pub-id pub-id-type="doi">10.1002/path.1700630103</pub-id><pub-id pub-id-type="pmid">14832686</pub-id></citation></ref>
<ref id="B38">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Franco</surname> <given-names>P. F.</given-names></name> <name><surname>Silva</surname> <given-names>N. C.</given-names></name> <name><surname>Fazito do Vale</surname> <given-names>V.</given-names></name> <name><surname>Abreu</surname> <given-names>J. F.</given-names></name> <name><surname>Santos</surname> <given-names>V. C.</given-names></name> <name><surname>Gontijo</surname> <given-names>N. F.</given-names></name> <etal/></person-group>. (<year>2016</year>). <article-title>Inhibition of the classical pathway of the complement system by saliva of <italic>Amblyomma cajennense</italic> (Acari: Ixodidae)</article-title>. <source>Exp. Parasitol.</source> <volume>164</volume>, <fpage>91</fpage>&#x02013;<lpage>96</lpage>. <pub-id pub-id-type="doi">10.1016/j.exppara.2016.03.002</pub-id><pub-id pub-id-type="pmid">26948715</pub-id></citation></ref>
<ref id="B39">
<citation citation-type="journal"><person-group person-group-type="author"><collab>Genomic Resources Development Consortium</collab> <name><surname>Contreras</surname> <given-names>M.</given-names></name> <name><surname>de la Fuente</surname> <given-names>J.</given-names></name> <name><surname>Estrada-Pe&#x000F1;a</surname> <given-names>A.</given-names></name> <name><surname>Grubhoffer</surname> <given-names>L.</given-names></name> <name><surname>Tobes</surname> <given-names>R.</given-names></name></person-group> (<year>2014</year>). <article-title>Transcriptome sequence divergence between Lyme disease tick vectors, <italic>Ixodes scapularis</italic> and <italic>Ixodes ricinus</italic>. Genomic Resources Notes</article-title>. <source>Mol. Ecol. Resour.</source> <volume>14</volume>, <fpage>1095</fpage>. <pub-id pub-id-type="doi">10.1111/1755-0998.12298</pub-id></citation></ref>
<ref id="B40">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Gordon</surname> <given-names>W. S.</given-names></name> <name><surname>Brownlee</surname> <given-names>A.</given-names></name> <name><surname>Wilson</surname> <given-names>D. R.</given-names></name> <name><surname>MacLeod</surname> <given-names>J.</given-names></name></person-group> (<year>1932</year>). <article-title>Tick-borne fever</article-title>. <source>J. Comp. Path.</source> <volume>45</volume>, <fpage>301</fpage>&#x02013;<lpage>302</lpage>. <pub-id pub-id-type="doi">10.1016/S0368-1742(32)80025-1</pub-id></citation></ref>
<ref id="B41">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Gulia-Nuss</surname> <given-names>M.</given-names></name> <name><surname>Nuss</surname> <given-names>A. B.</given-names></name> <name><surname>Meyer</surname> <given-names>J. M.</given-names></name> <name><surname>Sonenshine</surname> <given-names>D. E.</given-names></name> <name><surname>Roe</surname> <given-names>R. M.</given-names></name> <name><surname>Waterhouse</surname> <given-names>R. M.</given-names></name> <etal/></person-group>. (<year>2016</year>). <article-title>Genomic insights into the <italic>Ixodes scapularis</italic> tick vector of Lyme disease</article-title>. <source>Nat. Commun.</source> <volume>7</volume>:<fpage>10507</fpage>. <pub-id pub-id-type="doi">10.1038/ncomms10507</pub-id><pub-id pub-id-type="pmid">26856261</pub-id></citation></ref>
<ref id="B42">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>H&#x000E9;ja</surname> <given-names>D.</given-names></name> <name><surname>Kocsis</surname> <given-names>A.</given-names></name> <name><surname>Dob&#x000F3;</surname> <given-names>J.</given-names></name> <name><surname>Szil&#x000E1;gyi</surname> <given-names>K.</given-names></name> <name><surname>Sz&#x000E1;sz</surname> <given-names>R.</given-names></name> <name><surname>Z&#x000E1;vodszky</surname> <given-names>P.</given-names></name> <etal/></person-group>. (<year>2012</year>). <article-title>Revised mechanism of complement lectin-pathway activation revealing the role of serine protease MASP-1 as the exclusive activator of MASP-2</article-title>. <source>Proc. Natl. Acad. Sci. U.S.A.</source> <volume>109</volume>, <fpage>10498</fpage>&#x02013;<lpage>10503</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.1202588109</pub-id><pub-id pub-id-type="pmid">22691502</pub-id></citation></ref>
<ref id="B43">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kim</surname> <given-names>T. K.</given-names></name> <name><surname>Tirloni</surname> <given-names>L.</given-names></name> <name><surname>Pinto</surname> <given-names>A. F.</given-names></name> <name><surname>Moresco</surname> <given-names>J.</given-names></name> <name><surname>Yates</surname> <given-names>J. R.</given-names> <suffix>III.</suffix></name> <name><surname>da Silva Vaz</surname> <given-names>I.</given-names> <suffix>Jr.</suffix></name> <etal/></person-group>. (<year>2016</year>). <article-title><italic>Ixodes scapularis</italic> tick saliva proteins sequentially secreted every 24 h during blood feeding</article-title>. <source>PLoS Negl. Trop. Dis.</source> <volume>10</volume>:<fpage>e0004323</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pntd.0004323</pub-id><pub-id pub-id-type="pmid">26751078</pub-id></citation></ref>
<ref id="B44">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kocan</surname> <given-names>K. M.</given-names></name> <name><surname>Busby</surname> <given-names>A. T.</given-names></name> <name><surname>Allison</surname> <given-names>R. W.</given-names></name> <name><surname>Breshears</surname> <given-names>M. A.</given-names></name> <name><surname>Coburn</surname> <given-names>L.</given-names></name> <name><surname>Galindo</surname> <given-names>R. C.</given-names></name> <etal/></person-group>. (<year>2012</year>). <article-title>Sheep experimentally-infected with a human isolate of <italic>Anaplasma phagocytophilum</italic> serve as a host for infection of <italic>Ixodes scapularis</italic></article-title>. <source>Ticks Tick Borne Dis.</source> <volume>3</volume>, <fpage>147</fpage>&#x02013;<lpage>153</lpage>. <pub-id pub-id-type="doi">10.1016/j.ttbdis.2012.01.004</pub-id><pub-id pub-id-type="pmid">22534515</pub-id></citation></ref>
<ref id="B45">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kotsyfakis</surname> <given-names>M.</given-names></name> <name><surname>Schwarz</surname> <given-names>A.</given-names></name> <name><surname>Erhart</surname> <given-names>J.</given-names></name> <name><surname>Ribeiro</surname> <given-names>J. M.</given-names></name></person-group> (<year>2015</year>). <article-title>Tissue- and time-dependent transcription in <italic>Ixodes ricinus</italic> salivary glands and midguts when blood feeding on the vertebrate host</article-title>. <source>Sci. Rep.</source> <volume>5</volume>:<fpage>9103</fpage>. <pub-id pub-id-type="doi">10.1038/srep09103</pub-id><pub-id pub-id-type="pmid">25765539</pub-id></citation></ref>
<ref id="B46">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kr&#x000F6;ber</surname> <given-names>T.</given-names></name> <name><surname>Guerin</surname> <given-names>P. M.</given-names></name></person-group> (<year>2007</year>). <article-title>An <italic>in vitro</italic> feeding assay to test acaricides for control of hard ticks</article-title>. <source>Pest Manag. Sci.</source> <volume>63</volume>, <fpage>17</fpage>&#x02013;<lpage>22</lpage>. <pub-id pub-id-type="doi">10.1002/ps.1293</pub-id><pub-id pub-id-type="pmid">17089333</pub-id></citation></ref>
<ref id="B47">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Krull</surname> <given-names>C.</given-names></name> <name><surname>B&#x000F6;hme</surname> <given-names>B.</given-names></name> <name><surname>Clausen</surname> <given-names>P. H.</given-names></name> <name><surname>Nijhof</surname> <given-names>A. M.</given-names></name></person-group> (<year>2017</year>). <article-title>Optimization of an artificial tick feeding assay for <italic>Dermacentor reticulatus</italic></article-title>. <source>Parasit. Vectors</source> 1<volume>0</volume>:<fpage>60</fpage>. <pub-id pub-id-type="doi">10.1186/s13071-017-2000-4</pub-id></citation></ref>
<ref id="B48">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kurtti</surname> <given-names>T. J.</given-names></name> <name><surname>Munderloh</surname> <given-names>U. G.</given-names></name> <name><surname>Andreadis</surname> <given-names>T. G.</given-names></name> <name><surname>Magnarelli</surname> <given-names>L. A.</given-names></name> <name><surname>Mather</surname> <given-names>T. N.</given-names></name></person-group> (<year>1996</year>). <article-title>Tick cell culture isolation of an intracellular prokaryote from the tick <italic>Ixodes scapularis</italic></article-title>. <source>J. Inv. Path.</source> <volume>67</volume>, <fpage>318</fpage>&#x02013;<lpage>321</lpage>. <pub-id pub-id-type="doi">10.1006/jipa.1996.0050</pub-id><pub-id pub-id-type="pmid">8812616</pub-id></citation></ref>
<ref id="B49">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lawrie</surname> <given-names>C. H.</given-names></name> <name><surname>Randolph</surname> <given-names>S. E.</given-names></name> <name><surname>Nuttall</surname> <given-names>P. A.</given-names></name></person-group> (<year>1999</year>). <article-title><italic>Ixodes</italic> ticks: serum species sensitivity of anticomplement activity</article-title>. <source>Exp. Parasitol.</source> <volume>93</volume>, <fpage>207</fpage>&#x02013;<lpage>214</lpage>. <pub-id pub-id-type="doi">10.1006/expr.1999.4456</pub-id><pub-id pub-id-type="pmid">10600446</pub-id></citation></ref>
<ref id="B50">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lawrie</surname> <given-names>C. H.</given-names></name> <name><surname>Sim</surname> <given-names>R. B.</given-names></name> <name><surname>Nuttall</surname> <given-names>P. A.</given-names></name></person-group> (<year>2005</year>). <article-title>Investigation of the mechanisms of anti-complement activity in <italic>Ixodes ricinus</italic> ticks</article-title>. <source>Mol. Immunol.</source> <volume>42</volume>, <fpage>31</fpage>&#x02013;<lpage>38</lpage>. <pub-id pub-id-type="doi">10.1016/j.molimm.2004.07.001</pub-id><pub-id pub-id-type="pmid">15488941</pub-id></citation></ref>
<ref id="B51">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Madden</surname> <given-names>T. L.</given-names></name> <name><surname>Tatusov</surname> <given-names>R. L.</given-names></name> <name><surname>Zhang</surname> <given-names>J.</given-names></name></person-group> (<year>1996</year>). <article-title>Applications of network BLAST server</article-title>. <source>Meth. Enzymol.</source> <volume>266</volume>, <fpage>131</fpage>&#x02013;<lpage>141</lpage>. <pub-id pub-id-type="doi">10.1016/S0076-6879(96)66011-X</pub-id><pub-id pub-id-type="pmid">8743682</pub-id></citation></ref>
<ref id="B52">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mans</surname> <given-names>B. J.</given-names></name></person-group> (<year>2005</year>). <article-title>Tick histamine-binding proteins and related lipocalins: potential as therapeutic agents</article-title>. <source>Curr. Opin. Investig. Drugs.</source> <volume>6</volume>, <fpage>1131</fpage>&#x02013;<lpage>1135</lpage>. <pub-id pub-id-type="pmid">16312134</pub-id></citation></ref>
<ref id="B53">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Manzano-Rom&#x000E1;n</surname> <given-names>R.</given-names></name> <name><surname>D&#x000ED;az-Mart&#x000ED;n</surname> <given-names>V.</given-names></name> <name><surname>Oleaga</surname> <given-names>A.</given-names></name> <name><surname>Obolo-Mvoulouga</surname> <given-names>P.</given-names></name> <name><surname>P&#x000E9;rez-S&#x000E1;nchez</surname> <given-names>R.</given-names></name></person-group> (<year>2016</year>). <article-title>TSGP4 from <italic>Ornithodoros moubata</italic>: molecular cloning, phylogenetic analysis and vaccine efficacy of a new member of the lipocalin clade of cysteinyl leukotriene scavengers</article-title>. <source>Vet. Parasitol.</source> <volume>227</volume>, <fpage>130</fpage>&#x02013;<lpage>137</lpage>. <pub-id pub-id-type="doi">10.1016/j.vetpar.2016.08.005</pub-id><pub-id pub-id-type="pmid">27523949</pub-id></citation></ref>
<ref id="B54">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mendes-Sousa</surname> <given-names>A. F.</given-names></name> <name><surname>Nascimento</surname> <given-names>A. A. S.</given-names></name> <name><surname>Queiroz</surname> <given-names>D. C.</given-names></name> <name><surname>Vale</surname> <given-names>V. F.</given-names></name> <name><surname>Fujiwara</surname> <given-names>R. T.</given-names></name> <name><surname>Ara&#x000FA;jo</surname> <given-names>R. N.</given-names></name> <etal/></person-group>. (<year>2013</year>). <article-title>Different host complement systems and their interactions with saliva from <italic>Lutzomyia longipalpis</italic> (Diptera, Psychodidae) and <italic>Leishmania infantum</italic> promastigotes</article-title>. <source>PLoS ONE</source> <volume>8</volume>:<fpage>e79787</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pone.0079787</pub-id><pub-id pub-id-type="pmid">24255715</pub-id></citation></ref>
<ref id="B55">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Merino</surname> <given-names>M.</given-names></name> <name><surname>Antunes</surname> <given-names>S.</given-names></name> <name><surname>Mosqueda</surname> <given-names>J.</given-names></name> <name><surname>Moreno-Cid</surname> <given-names>J. A.</given-names></name> <name><surname>P&#x000E9;rez de la Lastra</surname> <given-names>J. M.</given-names></name> <name><surname>Rosario-Cruz</surname> <given-names>R.</given-names></name> <etal/></person-group>. (<year>2013</year>). <article-title>Vaccination with proteins involved in tick-pathogen interactions reduces vector infestations and pathogen infection</article-title>. <source>Vaccine</source> <volume>31</volume>, <fpage>5889</fpage>&#x02013;<lpage>5896</lpage>. <pub-id pub-id-type="doi">10.1016/j.vaccine.2013.09.037</pub-id><pub-id pub-id-type="pmid">24084474</pub-id></citation></ref>
<ref id="B56">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Moreno-Cid</surname> <given-names>J. A.</given-names></name> <name><surname>P&#x000E9;rez de la Lastra</surname> <given-names>J. M.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Jim&#x000E9;nez</surname> <given-names>M.</given-names></name> <name><surname>Pinal</surname> <given-names>R.</given-names></name> <name><surname>Estrada-Pe&#x000F1;a</surname> <given-names>A.</given-names></name> <etal/></person-group>. (<year>2013</year>). <article-title>Control of multiple arthropod vector infestations with subolesin/akirin vaccines</article-title>. <source>Vaccine</source> <volume>31</volume>, <fpage>1187</fpage>&#x02013;<lpage>1196</lpage>. <pub-id pub-id-type="doi">10.1016/j.vaccine.2012.12.073</pub-id><pub-id pub-id-type="pmid">23291476</pub-id></citation></ref>
<ref id="B57">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Munderloh</surname> <given-names>U. G.</given-names></name> <name><surname>Jauron</surname> <given-names>S. D.</given-names></name> <name><surname>Fingerle</surname> <given-names>V.</given-names></name> <name><surname>Leitritz</surname> <given-names>L.</given-names></name> <name><surname>Hayes</surname> <given-names>S. F.</given-names></name> <name><surname>Hautman</surname> <given-names>J. M.</given-names></name> <etal/></person-group>. (<year>1999</year>). <article-title>Invasion and intracellular development of the human granulocytic ehrlichiosis agent in tick cell culture</article-title>. <source>J. Clin. Microbiol</source>. <volume>37</volume>, <fpage>2518</fpage>&#x02013;<lpage>2524</lpage>. <pub-id pub-id-type="pmid">10405394</pub-id></citation></ref>
<ref id="B58">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Paesen</surname> <given-names>G. C.</given-names></name> <name><surname>Adams</surname> <given-names>P. L.</given-names></name> <name><surname>Nuttall</surname> <given-names>P. A.</given-names></name> <name><surname>Stuart</surname> <given-names>D. L.</given-names></name></person-group> (<year>2000</year>). <article-title>Tick histamine-binding proteins: lipocalins with a second binding cavity</article-title>. <source>Biochim. Biophys. Acta</source> <volume>1482</volume>, <fpage>92</fpage>&#x02013;<lpage>101</lpage>. <pub-id pub-id-type="doi">10.1016/S0167-4838(00)00168-0</pub-id><pub-id pub-id-type="pmid">11058751</pub-id></citation></ref>
<ref id="B59">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ribeiro</surname> <given-names>J. M.</given-names></name> <name><surname>Alarcon-Chaidez</surname> <given-names>F.</given-names></name> <name><surname>Francischetti</surname> <given-names>I. M.</given-names></name> <name><surname>Mans</surname> <given-names>B. J.</given-names></name> <name><surname>Mather</surname> <given-names>T. N.</given-names></name> <name><surname>Valenzuela</surname> <given-names>J. G.</given-names></name> <etal/></person-group>. (<year>2006</year>). <article-title>An annotated catalog of salivary gland transcripts from <italic>Ixodes scapularis</italic> ticks</article-title>. <source>Insect Biochem. Mol. Biol.</source> <volume>36</volume>, <fpage>111</fpage>&#x02013;<lpage>129</lpage>. <pub-id pub-id-type="doi">10.1016/j.ibmb.2005.11.005</pub-id><pub-id pub-id-type="pmid">16431279</pub-id></citation></ref>
<ref id="B60">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ribeiro</surname> <given-names>J. M.</given-names></name> <name><surname>Slov&#x000E1;k</surname> <given-names>M.</given-names></name> <name><surname>Francischetti</surname> <given-names>I. M.</given-names></name></person-group> (<year>2017</year>). <article-title>An insight into the sialome of <italic>Hyalomma excavatum</italic></article-title>. <source>Ticks Tick Borne Dis.</source> <volume>8</volume>, <fpage>201</fpage>&#x02013;<lpage>207</lpage>. <pub-id pub-id-type="doi">10.1016/j.ttbdis.2016.08.011</pub-id><pub-id pub-id-type="pmid">28049606</pub-id></citation></ref>
<ref id="B61">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Runza</surname> <given-names>V. L.</given-names></name> <name><surname>Schwaeble</surname> <given-names>W.</given-names></name> <name><surname>M&#x000E4;nnel</surname> <given-names>D. N.</given-names></name></person-group> (<year>2008</year>). <article-title>Ficolins: novel pattern recognition molecules of the innate immune response</article-title>. <source>Immunobiology</source> <volume>213</volume>, <fpage>297</fpage>&#x02013;<lpage>306</lpage>. <pub-id pub-id-type="doi">10.1016/j.imbio.2007.10.009</pub-id><pub-id pub-id-type="pmid">18406375</pub-id></citation></ref>
<ref id="B62">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Schuijt</surname> <given-names>T. J.</given-names></name> <name><surname>Coumou</surname> <given-names>J.</given-names></name> <name><surname>Narasimhan</surname> <given-names>S.</given-names></name> <name><surname>Dai</surname> <given-names>J.</given-names></name> <name><surname>Deponte</surname> <given-names>K.</given-names></name> <name><surname>Wouters</surname> <given-names>D.</given-names></name> <etal/></person-group>. (<year>2011</year>). <article-title>A tick mannose-binding lectin inhibitor interferes with the vertebrate complement cascade to enhance transmission of the Lyme disease agent</article-title>. <source>Cell Host Microbe</source> <volume>10</volume>, <fpage>136</fpage>&#x02013;<lpage>146</lpage>. <pub-id pub-id-type="doi">10.1016/j.chom.2011.06.010</pub-id><pub-id pub-id-type="pmid">21843870</pub-id></citation></ref>
<ref id="B63">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Schwarz</surname> <given-names>A.</given-names></name> <name><surname>Tenzer</surname> <given-names>S.</given-names></name> <name><surname>Hackenberg</surname> <given-names>M.</given-names></name> <name><surname>Erhart</surname> <given-names>J.</given-names></name> <name><surname>Gerhold-Ay</surname> <given-names>A.</given-names></name> <name><surname>Mazur</surname> <given-names>J.</given-names></name> <etal/></person-group>. (<year>2014</year>). <article-title>A systems level analysis reveals transcriptomic and proteomic complexity in <italic>Ixodes ricinus</italic> midgut and salivary glands during early attachment and feeding</article-title>. <source>Mol. Cell. Proteomics</source> <volume>13</volume>, <fpage>2725</fpage>&#x02013;<lpage>2735</lpage>. <pub-id pub-id-type="doi">10.1074/mcp.M114.039289</pub-id><pub-id pub-id-type="pmid">25048707</pub-id></citation></ref>
<ref id="B64">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Schwarz</surname> <given-names>A.</given-names></name> <name><surname>von Reumont</surname> <given-names>B. M.</given-names></name> <name><surname>Erhart</surname> <given-names>J.</given-names></name> <name><surname>Chagas</surname> <given-names>A. C.</given-names></name> <name><surname>Ribeiro</surname> <given-names>J. M.</given-names></name> <name><surname>Kotsyfakis</surname> <given-names>M.</given-names></name></person-group> (<year>2013</year>). <article-title>De novo <italic>Ixodes ricinus</italic> salivary gland transcriptome analysis using two next-generation sequencing methodologies</article-title>. <source>FASEB J.</source> <volume>27</volume>, <fpage>4745</fpage>&#x02013;<lpage>4756</lpage>. <pub-id pub-id-type="doi">10.1096/fj.13-232140</pub-id><pub-id pub-id-type="pmid">23964076</pub-id></citation></ref>
<ref id="B65">
<citation citation-type="book"><person-group person-group-type="author"><name><surname>Severo</surname> <given-names>M. S.</given-names></name> <name><surname>Pedra</surname> <given-names>J. H. F.</given-names></name> <name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Kocan</surname> <given-names>K. M.</given-names></name> <name><surname>de la Fuente</surname> <given-names>J.</given-names></name></person-group> (<year>2015</year>). <article-title>Anaplasma</article-title>, in <source>Molecular Medical Microbiology, 2nd Edn</source>, eds <person-group person-group-type="editor"><name><surname>Yi-Wei</surname> <given-names>T.</given-names></name> <name><surname>Dongyou</surname> <given-names>L.</given-names></name> <name><surname>Ian</surname> <given-names>P. R.</given-names></name> <name><surname>Schwartzman</surname> <given-names>J. D.</given-names></name> <name><surname>Sussman</surname> <given-names>M.</given-names></name></person-group> (<publisher-loc>London</publisher-loc>: <publisher-name>Academic Press; Elsevier</publisher-name>), <fpage>2033</fpage>&#x02013;<lpage>2042</lpage>.</citation></ref>
<ref id="B66">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shaw</surname> <given-names>D. K.</given-names></name> <name><surname>Wang</surname> <given-names>X.</given-names></name> <name><surname>Brown</surname> <given-names>L. J.</given-names></name> <name><surname>Oliva Ch&#x000E1;vez</surname> <given-names>A. S.</given-names></name> <name><surname>Reif</surname> <given-names>K. E.</given-names></name> <name><surname>Smith</surname> <given-names>A. A.</given-names></name> <etal/></person-group>. (<year>2017</year>). <article-title>Infection-derived lipids elicit an immune deficiency circuit in arthropods</article-title>. <source>Nat. Commun.</source> <volume>8</volume>:<fpage>14401</fpage>. <pub-id pub-id-type="doi">10.1038/ncomms14401</pub-id><pub-id pub-id-type="pmid">28195158</pub-id></citation></ref>
<ref id="B67">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sojka</surname> <given-names>D.</given-names></name> <name><surname>Pytelkova</surname> <given-names>J.</given-names></name> <name><surname>Perner</surname> <given-names>J.</given-names></name> <name><surname>Horn</surname> <given-names>M.</given-names></name> <name><surname>Konvickova</surname> <given-names>J.</given-names></name> <name><surname>Schrenkova</surname> <given-names>J.</given-names></name> <etal/></person-group>. (<year>2015</year>). <article-title>Multienzyme degradation of host serum albumin in ticks</article-title>. <source>Ticks Tick Borne Dis.</source> <volume>7</volume>, <fpage>604</fpage>&#x02013;<lpage>613</lpage>. <pub-id pub-id-type="doi">10.1016/j.ttbdis.2015.12.014</pub-id><pub-id pub-id-type="pmid">26724897</pub-id></citation></ref>
<ref id="B68">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Stuen</surname> <given-names>S.</given-names></name> <name><surname>Granquist</surname> <given-names>E. G.</given-names></name> <name><surname>Silaghi</surname> <given-names>C.</given-names></name></person-group> (<year>2013</year>). <article-title><italic>Anaplasma phagocytophilum</italic>&#x02013;a widespread multi-host pathogen with highly adaptive strategies</article-title>. <source>Front. Cell. Infect. Microbiol.</source> <volume>3</volume>:<fpage>31</fpage>. <pub-id pub-id-type="doi">10.3389/fcimb.2013.00031</pub-id><pub-id pub-id-type="pmid">23885337</pub-id></citation></ref>
<ref id="B69">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Stuen</surname> <given-names>S.</given-names></name> <name><surname>Okstad</surname> <given-names>W.</given-names></name> <name><surname>Artursson</surname> <given-names>K.</given-names></name> <name><surname>Al-Khedery</surname> <given-names>B.</given-names></name> <name><surname>Barbet</surname> <given-names>A.</given-names></name> <name><surname>Granquist</surname> <given-names>E. G.</given-names></name></person-group> (<year>2015</year>). <article-title>Lambs immunized with an inactivated variant of <italic>Anaplasma phagocytophilum</italic></article-title>. <source>Acta Vet. Scand.</source> 5<volume>7</volume>:<fpage>40</fpage>. <pub-id pub-id-type="doi">10.1186/s13028-015-0131-1</pub-id></citation></ref>
<ref id="B70">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tajeri</surname> <given-names>S.</given-names></name> <name><surname>Razmi</surname> <given-names>G.</given-names></name> <name><surname>Haghparast</surname> <given-names>A.</given-names></name></person-group> (<year>2016</year>). <article-title>Establishment of an artificial tick feeding system to study <italic>Theileria lestoquardi</italic> infection</article-title>. <source>PLoS ONE</source> <volume>11</volume>:<fpage>e0169053</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pone.0169053</pub-id><pub-id pub-id-type="pmid">28036364</pub-id></citation></ref>
<ref id="B71">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Thomas</surname> <given-names>V.</given-names></name> <name><surname>Fikrig</surname> <given-names>E.</given-names></name></person-group> (<year>2007</year>). <article-title><italic>Anaplasma phagocytophilum</italic> specifically induces tyrosine phosphorylation of ROCK1 during infection</article-title>. <source>Cell. Microbiol.</source> <volume>9</volume>, <fpage>1730</fpage>&#x02013;<lpage>1737</lpage>. <pub-id pub-id-type="doi">10.1111/j.1462-5822.2007.00908.x</pub-id><pub-id pub-id-type="pmid">17346310</pub-id></citation></ref>
<ref id="B72">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Trentelman</surname> <given-names>J. J.</given-names></name> <name><surname>Kleuskens</surname> <given-names>J. A.</given-names></name> <name><surname>van de Crommert</surname> <given-names>J.</given-names></name> <name><surname>Schetters</surname> <given-names>T. P.</given-names></name></person-group> (<year>2017</year>). <article-title>A new method for <italic>in vitro</italic> feeding of <italic>Rhipicephalus australis</italic> (formerly <italic>Rhipicephalus microplus</italic>) larvae: a valuable tool for tick vaccine development</article-title>. <source>Parasit. Vectors</source> 1<volume>0</volume>:<fpage>153</fpage>. <pub-id pub-id-type="doi">10.1186/s13071-017-2081-0</pub-id></citation></ref>
<ref id="B73">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tyson</surname> <given-names>K.</given-names></name> <name><surname>Elkins</surname> <given-names>C.</given-names></name> <name><surname>Patterson</surname> <given-names>H.</given-names></name> <name><surname>Fikrig</surname> <given-names>E.</given-names></name> <name><surname>De Silva</surname> <given-names>A.</given-names></name></person-group> (<year>2007</year>). <article-title>Biochemical and functional characterization of Salp20, an Ixodes scapularis tick salivary protein that inhibits the complement pathway</article-title>. <source>Insect Mol. Biol.</source> <volume>16</volume>, <fpage>469</fpage>&#x02013;<lpage>479</lpage>. <pub-id pub-id-type="doi">10.1111/j.1365-2583.2007.00742.x</pub-id><pub-id pub-id-type="pmid">17651236</pub-id></citation></ref>
<ref id="B74">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tyson</surname> <given-names>K. R.</given-names></name> <name><surname>Elkins</surname> <given-names>C.</given-names></name> <name><surname>de Silva</surname> <given-names>A. M.</given-names></name></person-group> (<year>2008</year>). <article-title>A novel mechanism of complement inhibition unmasked by a tick salivary protein that binds to properdin</article-title>. <source>J. Immunol.</source> <volume>180</volume>, <fpage>3964</fpage>&#x02013;<lpage>3968</lpage>. <pub-id pub-id-type="doi">10.4049/jimmunol.180.6.3964</pub-id><pub-id pub-id-type="pmid">18322205</pub-id></citation></ref>
<ref id="B75">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vald&#x000E9;s</surname> <given-names>J. J.</given-names></name></person-group> (<year>2014</year>). <article-title>Antihistamine response: a dynamically refined function at the host-tick interface</article-title>. <source>Parasit. Vectors</source> <volume>7</volume>:<fpage>491</fpage>. <pub-id pub-id-type="doi">10.1186/s13071-014-0491-9</pub-id><pub-id pub-id-type="pmid">25358914</pub-id></citation></ref>
<ref id="B76">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vald&#x000E9;s</surname> <given-names>J. J.</given-names></name> <name><surname>Cabezas-Cruz</surname> <given-names>A.</given-names></name> <name><surname>Sima</surname> <given-names>R.</given-names></name> <name><surname>Butterill</surname> <given-names>P. T.</given-names></name> <name><surname>Ru&#x000B0;&#x0017E;ek</surname> <given-names>D.</given-names></name> <name><surname>Nuttall</surname> <given-names>P. A.</given-names></name></person-group> (<year>2016</year>). <article-title>Substrate prediction of <italic>Ixodes ricinus</italic> salivary lipocalins differentially expressed during <italic>Borrelia afzelii</italic> infection</article-title>. <source>Sci. Rep.</source> <volume>6</volume>:<fpage>32372</fpage>. <pub-id pub-id-type="doi">10.1038/srep32372</pub-id><pub-id pub-id-type="pmid">27584086</pub-id></citation></ref>
<ref id="B77">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Valenzuela</surname> <given-names>J. G.</given-names></name> <name><surname>Charlab</surname> <given-names>R.</given-names></name> <name><surname>Mather</surname> <given-names>T. N.</given-names></name> <name><surname>Ribeiro</surname> <given-names>J. M.</given-names></name></person-group> (<year>2000</year>). <article-title>Purification, cloning, and expression of a novel salivary anticomplement protein from the tick, <italic>Ixodes scapularis</italic></article-title>. <source>J. Biol. Chem.</source> <volume>275</volume>, <fpage>18717</fpage>&#x02013;<lpage>18723</lpage>. <pub-id pub-id-type="doi">10.1074/jbc.M001486200</pub-id><pub-id pub-id-type="pmid">10749868</pub-id></citation></ref>
<ref id="B78">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Alberdi</surname> <given-names>P.</given-names></name> <name><surname>Moreno</surname> <given-names>A.</given-names></name> <name><surname>Moreno</surname> <given-names>M.</given-names></name> <name><surname>Tobes</surname> <given-names>R.</given-names></name> <etal/></person-group>. (<year>2015a</year>). <article-title>Integrated metabolomics, transcriptomics and proteomics identifies metabolic pathways affected by <italic>Anaplasma phagocytophilum</italic> infection in tick cells</article-title>. <source>Mol. Cell. Proteomics</source> <volume>14</volume>, <fpage>3154</fpage>&#x02013;<lpage>3172</lpage>. <pub-id pub-id-type="doi">10.1074/mcp.M115.051938</pub-id><pub-id pub-id-type="pmid">26424601</pub-id></citation></ref>
<ref id="B79">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Kocan</surname> <given-names>K. M.</given-names></name> <name><surname>Bonz&#x000F3;n-Kulichenko</surname> <given-names>E.</given-names></name> <name><surname>Alberdi</surname> <given-names>P.</given-names></name> <name><surname>Blouin</surname> <given-names>E. F.</given-names></name> <etal/></person-group>. (<year>2015b</year>). <article-title>Identification and characterization of <italic>Anaplasma phagocytophilum</italic> proteins involved in infection of the tick vector, <italic>Ixodes scapularis</italic></article-title>. <source>PLoS ONE</source> <volume>10</volume>:<fpage>e0137237</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pone.0137237</pub-id><pub-id pub-id-type="pmid">26340562</pub-id></citation></ref>
<ref id="B80">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>L&#x000F3;pez</surname> <given-names>V.</given-names></name> <name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Cabezas-Cruz</surname> <given-names>A.</given-names></name> <name><surname>L&#x000F3;pez</surname> <given-names>J. A.</given-names></name> <name><surname>V&#x000E1;zquez</surname> <given-names>J.</given-names></name> <etal/></person-group>. (<year>2016</year>). <article-title>The intracellular bacterium <italic>Anaplasma phagocytophilum</italic> selectively manipulates the levels of vertebrate host proteins in the tick vector <italic>Ixodes scapularis</italic></article-title>. <source>Parasit. Vectors</source> <volume>9</volume>:<fpage>467</fpage>. <pub-id pub-id-type="doi">10.1186/s13071-016-1747-3</pub-id><pub-id pub-id-type="pmid">27561965</pub-id></citation></ref>
<ref id="B81">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Marina</surname> <given-names>A.</given-names></name> <name><surname>de la Fuente</surname> <given-names>J.</given-names></name></person-group> (<year>2017</year>). <article-title>Applying proteomics to tick vaccine development: where are we?</article-title> <source>Expert Rev. Proteomics</source> <volume>14</volume>, <fpage>211</fpage>&#x02013;<lpage>221</lpage>. <pub-id pub-id-type="doi">10.1080/14789450.2017.1284590</pub-id><pub-id pub-id-type="pmid">28099817</pub-id></citation></ref>
<ref id="B82">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Popara</surname> <given-names>M.</given-names></name> <name><surname>Ayll&#x000F3;n</surname> <given-names>N.</given-names></name> <name><surname>Fern&#x000E1;ndez de Mera</surname> <given-names>I. G.</given-names></name> <name><surname>Mateos-Hern&#x000E1;ndez</surname> <given-names>L.</given-names></name> <name><surname>Galindo</surname> <given-names>R. C.</given-names></name> <etal/></person-group>. (<year>2014</year>). <article-title>A systems biology approach to the characterization of stress response in <italic>Dermacentor reticulatus</italic> tick unfed larvae</article-title>. <source>PLoS ONE</source> <volume>9</volume>:<fpage>e89564</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pone.0089564</pub-id><pub-id pub-id-type="pmid">24586875</pub-id></citation></ref>
<ref id="B83">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wagemakers</surname> <given-names>A.</given-names></name> <name><surname>Coumou</surname> <given-names>J.</given-names></name> <name><surname>Schuijt</surname> <given-names>T. J.</given-names></name> <name><surname>Oei</surname> <given-names>A.</given-names></name> <name><surname>Nijhof</surname> <given-names>A. M.</given-names></name> <name><surname>van &#x00027;t Veer</surname> <given-names>C.</given-names></name> <etal/></person-group>. (<year>2016</year>). <article-title>An <italic>Ixodes ricinus</italic> tick salivary lectin pathway inhibitor protects <italic>Borrelia burgdorferi</italic> sensu lato from human complement</article-title>. <source>Vector Borne Zoonotic Dis.</source> <volume>16</volume>, <fpage>223</fpage>&#x02013;<lpage>228</lpage>. <pub-id pub-id-type="doi">10.1089/vbz.2015.1901</pub-id><pub-id pub-id-type="pmid">26901751</pub-id></citation></ref>
<ref id="B84">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Weisheit</surname> <given-names>S.</given-names></name> <name><surname>Villar</surname> <given-names>M.</given-names></name> <name><surname>Tykalov&#x000E1;</surname> <given-names>H.</given-names></name> <name><surname>Popara</surname> <given-names>M.</given-names></name> <name><surname>Loecherbach</surname> <given-names>J.</given-names></name> <name><surname>Watson</surname> <given-names>M.</given-names></name> <etal/></person-group>. (<year>2015</year>). <article-title><italic>Ixodes scapularis</italic> and <italic>Ixodes ricinus</italic> tick cell lines respond to infection with tick-borne encephalitis virus: transcriptomic and proteomic analysis</article-title>. <source>Parasit. Vectors</source> <volume>8</volume>:<fpage>599</fpage>. <pub-id pub-id-type="doi">10.1186/s13071-015-1210-x</pub-id><pub-id pub-id-type="pmid">26582129</pub-id></citation></ref>
<ref id="B85">
<citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wikel</surname> <given-names>S. K.</given-names></name> <name><surname>Allen</surname> <given-names>J. R.</given-names></name></person-group> (<year>1977</year>). <article-title>Acquired resistance to ticks. III. Cobra venom factor and the resistance response</article-title>. <source>Immunology</source> <volume>32</volume>, <fpage>457</fpage>&#x02013;<lpage>465</lpage>.</citation></ref>
</ref-list>
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<fn fn-type="financial-disclosure"><p><bold>Funding.</bold> This research was partially supported by the Ministerio de Economia, Industria y Competitividad (Spain) grant BFU2016-79892-P, and the CSIC grant 201440E098 to JD. The University of Castilla-La Mancha (UCLM), Spain, supported the stay of MC with AN&#x00027;s group at the Free University of Berlin (Germany). MV and IF were supported by the Research Plan of the UCLM, Spain. The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.</p>
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</fn-group>
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