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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Cell. Inf. Microbio.</journal-id>
<journal-title>Frontiers in Cellular and Infection Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Cell. Inf. Microbio.</abbrev-journal-title>
<issn pub-type="epub">2235-2988</issn>
<publisher>
<publisher-name>Frontiers Research Foundation</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fcimb.2012.00070</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>An RGD Helper Sequence in CagL of <italic>Helicobacter pylori</italic> Assists in Interactions with Integrins and Injection of CagA</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Conradi</surname> <given-names>Jens</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x02020;</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Tegtmeyer</surname> <given-names>Nicole</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x02020;</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Wo&#x0017A;na</surname> <given-names>Marta</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Wissbrock</surname> <given-names>Marco</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Michalek</surname> <given-names>Carmela</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Gagell</surname> <given-names>Corinna</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Cover</surname> <given-names>Timothy L.</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
<xref ref-type="aff" rid="aff6"><sup>6</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Frank</surname> <given-names>Ronald</given-names></name>
<xref ref-type="aff" rid="aff7"><sup>7</sup></xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Sewald</surname> <given-names>Norbert</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn001">&#x0002A;</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Backert</surname> <given-names>Steffen</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="author-notes" rid="fn001">&#x0002A;</xref>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Department of Chemistry, Bielefeld University</institution> <country>Bielefeld, Germany</country></aff>
<aff id="aff2"><sup>2</sup><institution>Department of Microbiology, Otto-von-Guericke University</institution> <country>Magdeburg, Germany</country></aff>
<aff id="aff3"><sup>3</sup><institution>School of Biomolecular and Biomedical Sciences, University College Dublin</institution> <country>Dublin, Ireland</country></aff>
<aff id="aff4"><sup>4</sup><institution>Department of Medicine, Vanderbilt University School of Medicine</institution> <country>Nashville, TN, USA</country></aff>
<aff id="aff5"><sup>5</sup><institution>Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine</institution> <country>Nashville, TN, USA</country></aff>
<aff id="aff6"><sup>6</sup><institution>Veterans Affairs Tennessee Valley Healthcare System</institution> <country>Nashville, TN, USA</country></aff>
<aff id="aff7"><sup>7</sup><institution>Department of Chemical Biology, Helmholtz Center for Infection Research</institution> <country>Braunschweig, Germany</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: D. Scott Merrell, Uniformed Services University, USA</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Jeong-Heon Cha, Yonsei University, South Korea; Nina Salama, Fred Hutchinson Cancer Research Center, USA; Jay V. Solnick, University of California Davis, USA</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: Norbert Sewald, Department of Chemistry, Bielefeld University, PO Box 10 01 31, D-33501 Bielefeld, Germany. e-mail: <email>norbert.sewald&#x00040;uni-bielefeld.de</email>; Steffen Backert, School of Biomolecular and Biomedical Sciences, Science Center West, University College Dublin, Belfield Campus, Dublin-4, Ireland. e-mail: <email>steffen.backert&#x00040;ucd.ie</email></p></fn>
<fn fn-type="other" id="fn002"><p><sup>&#x02020;</sup>Jens Conradi and Nicole Tegtmeyer have contributed equally to this work.</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>23</day>
<month>05</month>
<year>2012</year>
</pub-date>
<pub-date pub-type="collection">
<year>2012</year>
</pub-date>
<volume>2</volume>
<elocation-id>70</elocation-id>
<history>
<date date-type="received">
<day>17</day>
<month>11</month>
<year>2011</year>
</date>
<date date-type="accepted">
<day>02</day>
<month>05</month>
<year>2012</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2012 Conradi, Tegtmeyer, Wo&#x0017A;na, Wissbrock, Michalek, Gagell, Cover, Frank, Sewald and Backert.</copyright-statement>
<copyright-year>2012</copyright-year>
<license license-type="open-access" xlink:href="http://www.frontiersin.org/licenseagreement"><p>This is an open-access article distributed under the terms of the <uri xlink:href="http://creativecommons.org/licenses/by-nc/3.0/">Creative Commons Attribution Non Commercial License</uri>, which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited.</p></license>
</permissions>
<abstract>
<p><italic>Helicobacter pylori</italic> is a specific gastric pathogen that colonizes the stomach in more than 50% of the world&#x02019;s human population. Infection with this bacterium can induce several types of gastric pathology, ranging from chronic gastritis to peptic ulcers and even adenocarcinoma. Virulent <italic>H. pylori</italic> isolates encode components of a type IV secretion system (T4SS), which form a pilus for the injection of virulence proteins such as CagA into host target cells. This is accomplished by a specialized adhesin on the pilus surface, the protein CagL, a putative VirB5 ortholog, which binds to host cell &#x003B2;<sub>1</sub> integrin, triggering subsequent delivery of CagA across the host cell membrane. Like the human extracellular matrix protein fibronectin, CagL contains an RGD (Arg-Gly-Asp) motif and is able to trigger intracellular signaling pathways by RGD-dependent binding to integrins. While CagL binding to host cells is mediated primarily by the RGD motif, we identified an auxiliary binding motif for CagL&#x02013;integrin interaction. Here, we report on a surface exposed FEANE (Phe-Glu-Ala-Asn-Glu) interaction motif in spatial proximity to the RGD sequence, which enhances the interactions of CagL with integrins. It will be referred to as RGD helper sequence (RHS). Competitive cell adhesion assays with recombinant wild type CagL and point mutants, competition experiments with synthetic cyclic and linear peptides, and peptide array experiments revealed amino acids essential for the interaction of the RHS motif with integrins. Infection experiments indicate that the RHS motif plays a role in the early interaction of <italic>H. pylori</italic> T4SS with integrin, to trigger signaling and to inject CagA into host cells. We thus postulate that CagL is a versatile T4SS surface protein equipped with at least two motifs to promote binding to integrins, thereby causing aberrant signaling within host cells and facilitating translocation of CagA into host cells, thus contributing directly to <italic>H. pylori</italic> pathogenesis.</p>
</abstract>
<kwd-group>
<kwd>CagL</kwd>
<kwd>binding motifs</kwd>
<kwd>cortactin</kwd>
<kwd>ERK kinase</kwd>
<kwd>integrin interaction</kwd>
<kwd>&#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub></kwd>
</kwd-group>
<counts>
<fig-count count="8"/>
<table-count count="4"/>
<equation-count count="0"/>
<ref-count count="50"/>
<page-count count="15"/>
<word-count count="11107"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="introduction">
<title>Introduction</title>
<p>About 50% of the world&#x02019;s human population is infected by <italic>Helicobacter pylori</italic>, a gastric pathogen causing gastritis in all infected individuals and more severe gastric disease in 10&#x02013;15% of cases (Amieva and El-Omar, <xref ref-type="bibr" rid="B1">2008</xref>; Atherton and Blaser, <xref ref-type="bibr" rid="B3">2009</xref>; Polk and Peek, <xref ref-type="bibr" rid="B34">2010</xref>). <italic>H. pylori</italic> can infect humans lifelong as the consequence of a highly complex host&#x02013;pathogen crosstalk, and is an excellent model system to study bacterially induced epithelial cell signaling cascades which are of relevance to neoplasia. <italic>H. pylori</italic> strains are surprisingly diverse in both their genome sequences and resulting virulence. Multiple bacterial virulence factors such as the <italic>cag</italic> pathogenicity island (PAI), the protein CagA, and the vacuolating toxin VacA have been identified. Considerable research interest worldwide is currently focused on the effector protein CagA because CagA-positive but not CagA-negative <italic>H. pylori</italic> strains are associated with the development of severe gastric diseases. A direct causal link between CagA and carcinogenesis <italic>in vivo</italic> was achieved by the generation of transgenic mice expressing CagA (Ohnishi et al., <xref ref-type="bibr" rid="B32">2008</xref>). The <italic>cag</italic>PAI has been shown to encode a type IV secretion system (T4SS) for the delivery of CagA into the cytoplasm of host target cells, where CagA is phosphorylated by host tyrosine kinases (Backert and Meyer, <xref ref-type="bibr" rid="B7">2006</xref>; Mueller et al., <xref ref-type="bibr" rid="B30">2012</xref>). T4SSs are typically composed of 11 VirB proteins (encoded by <italic>virB1&#x02013;11</italic>) and the so-called coupling protein (VirD4, an NTPase). The <italic>H. pylori</italic> <italic>cag</italic>PAI contains up to 32 genes encoding orthologs of all 11 VirB proteins and VirD4 as well as various associated factors (Backert et al., <xref ref-type="bibr" rid="B4">2002</xref>; Backert and Selbach, <xref ref-type="bibr" rid="B8">2008</xref>; Fischer, <xref ref-type="bibr" rid="B15">2011</xref>; Tegtmeyer et al., <xref ref-type="bibr" rid="B43">2011a</xref>). Scanning electron microscopy (SEM) studies showed that the <italic>H. pylori</italic> T4SS is induced upon host cell contact and forms pilus-like structures protruding from the bacterial membrane (Rohde et al., <xref ref-type="bibr" rid="B35">2003</xref>; Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>).</p>
<p>Various cell surface molecules are required for T4SS function, suggesting a sophisticated control mechanism by which <italic>H. pylori</italic> injects CagA (Wessler and Backert, <xref ref-type="bibr" rid="B47">2008</xref>). The first identified host receptor for the T4SS was integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, according to a series of experiments including respective knockout cell lines, gene silencing RNAs, function-blocking antibodies, and competition studies (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>). The bacterial interaction partner was identified as CagL, a VirB5 ortholog, and specialized adhesin that is targeted to the pilus surface, where it binds to integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> and mediates receptor-dependent delivery of CagA into gastric epithelial cells (Backert et al., <xref ref-type="bibr" rid="B6">2008</xref>, <xref ref-type="bibr" rid="B5">2011</xref>). Like fibronectin, an extracellular matrix protein and natural ligand of integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, CagL contains an arginine&#x02013;glycine&#x02013;aspartate (RGD) motif that was shown to be important for interaction with integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> on host cells (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>). Binding of CagL during infection or by incubation with recombinant protein <italic>in vitro</italic> elicits downstream signaling like tyrosine kinase activation of several proteins including EGF-receptor, FAK, and Src (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>; Saha et al., <xref ref-type="bibr" rid="B36">2010</xref>; Tegtmeyer et al., <xref ref-type="bibr" rid="B42">2010</xref>) as well as stimulation of ERK1/2 MAP kinase (Wiedemann et al., <xref ref-type="bibr" rid="B48">2012</xref>). In line with these observations, various other structural T4SS proteins have subsequently also been demonstrated to bind to &#x003B2;<sub>1</sub> integrins <italic>in vitro</italic>, including CagA, CagI, and CagY (Jim&#x000E9;nez-Soto et al., <xref ref-type="bibr" rid="B23">2009</xref>). In the same study, mutation of the RGD motif in CagL revealed no reduction of injected CagA during infection (Jim&#x000E9;nez-Soto et al., <xref ref-type="bibr" rid="B23">2009</xref>). Using mass spectrometry it was further reported that surface exposed CagL associates with two other <italic>cag</italic>PAI proteins, CagI, and CagH (Shaffer et al., <xref ref-type="bibr" rid="B38">2011</xref>). All three factors are required for CagA translocation into host cells. SEM analysis revealed that these proteins are involved in the formation of T4SS pili. The <italic>H. pylori</italic> mutant strains &#x00394;<italic>cagI</italic> and &#x00394;<italic>cagL</italic> failed to form T4SS pili, while the &#x00394;<italic>cagH</italic> mutant revealed a hyperpiliated phenotype and produced pili that are elongated and thickened as compared to those of the wild type (WT) bacteria (Shaffer et al., <xref ref-type="bibr" rid="B38">2011</xref>). This suggests that T4SS pilus dimensions may be regulated by CagH. Taken together, the above results indicate that CagH, CagI, and CagL are components of a T4SS subassembly complex involved in the biogenesis of pili that interact with integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>; Shaffer et al., <xref ref-type="bibr" rid="B38">2011</xref>). However, the exact co-operation of the various integrin-targeting <italic>cag</italic>PAI proteins is not yet clear and needs to be investigated.</p>
<p>We recently reported on cell-based <italic>in vitro</italic> binding studies with WM-115 and AGS cells revealing that CagL not only interacts with integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, but also with &#x003B1;<sub>V</sub>&#x003B2;<sub>3</sub> and &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub> integrins (Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>; Wiedemann et al., <xref ref-type="bibr" rid="B48">2012</xref>). Infection and <italic>in vitro</italic> binding studies showed that CagL induces gastrin expression via a novel integrin &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub>-integrin linked kinase signaling complex independent of CagA injection (Wiedemann et al., <xref ref-type="bibr" rid="B48">2012</xref>). CagL&#x02013;integrin &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub> interactions were demonstrated by immunoprecipitation and Biacore binding studies. In addition, the adhesion of WM-115 cells to immobilized CagL was inhibited by cyclic RGD peptides with pre-defined conformation, where the sequence was based on the CagL sequence Ala-Leu-Arg-Gly-Asp-Leu-Ala (ALRGDLA; Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>). The application of the so-called spatial screening approach had previously been applied in the screening of cyclic RGD peptides and resulted in highly active peptides that efficiently and selectively inhibit the interaction of extracellular matrix proteins like vitronectin, fibronectin, and fibrinogen with the integrins &#x003B1;<sub>V</sub>&#x003B2;<sub>3</sub>, &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, and &#x003B1;<sub>IIb</sub>&#x003B2;<sub>3</sub> in the nanomolar IC<sub>50</sub> range (Gurrath et al., <xref ref-type="bibr" rid="B19">1992</xref>; Pfaff et al., <xref ref-type="bibr" rid="B33">1994</xref>; Haubner et al., <xref ref-type="bibr" rid="B21">1996</xref>, <xref ref-type="bibr" rid="B20">1997</xref>; Weide et al., <xref ref-type="bibr" rid="B46">2007</xref>). The spatial screening approach makes use of incorporation of single <sc>d</sc>-amino acids into cyclic peptides in order to lock the conformation and to predictably present the amino acid side chain functional groups in a well-defined manner. <sc>d</sc>-Amino acids are known to induce and stabilize discrete turn structures in linear and, especially, cyclic peptides. Different cyclic RGD peptides with the CagL basic sequence ALRGDLA and a <sc>d</sc>-amino acid in different positions were synthesized. The variation of the amino acid stereochemistry contributes to different backbone structures, increases the spatial diversity, and provides constrained peptides with different &#x003B2;- and &#x003B3;-turns. The structures were evaluated using NMR and molecular dynamics calculations, and activities of the different peptides were determined in cell adhesion assays. These structure&#x02013;activity relationship studies revealed a &#x003B2;-turn around Asp-<sc>d</sc>-Leu-Ala-Arg to be favorable for integrin interactions (Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>). The corresponding cyclopeptides were shown to inhibit integrin-mediated interactions of WM-115 cells with CagL. In particular, the cyclopeptide-7 [c-(-RGDlA-); Table <xref ref-type="table" rid="T3">3</xref>, <sc>d</sc>-amino acids are written in small letters] displayed high activity (Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>).</p>
<p>In comparison with purified CagL<sup>WT</sup>, purified CagL mutants (CagL<sup>RAD</sup> and CagL<sup>RGA</sup>) exhibited decreased, but not completely abolished affinity to integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, &#x003B1;<sub>V</sub>&#x003B2;<sub>3</sub>, and &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub> <italic>in vitro</italic> (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>; Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>; Wiedemann et al., <xref ref-type="bibr" rid="B48">2012</xref>). Other recent studies indicated that the RGD motif of CagL is certainly important but not sufficient for triggering cell signaling (Tegtmeyer et al., <xref ref-type="bibr" rid="B42">2010</xref>; Wiedemann et al., <xref ref-type="bibr" rid="B48">2012</xref>). Taken together, these data strongly underscore the importance of the RGD motif for CagL binding (Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>), but also suggested the existence of one or more yet unidentified auxiliary motifs that is/are involved in CagL&#x02013;integrin interactions. Here we report that another CagL motif, a FEANE-containing sequence, in proximity to the RGD motif, participates in binding of CagL to integrins (thus referred to as RHS) and is able to induce cell binding and signaling both <italic>in vitro</italic> and during <italic>H. pylori</italic> infection of gastric epithelial cells.</p>
</sec>
<sec sec-type="materials|methods" id="s1">
<title>Materials and Methods</title>
<sec>
<title>Human cell culture and <italic>H. pylori</italic> strains</title>
<p>The human epithelial melanoma cell line WM-115 (ATCC, Wesel, Germany; CRL-1675&#x02122;) is an adherent growing cell line with continuous integrin expression (mainly integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, &#x003B1;<sub>V</sub>&#x003B2;<sub>3,</sub> and &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub>) and was cultivated in DMEM medium (PAA, Pasching, Austria) supplemented with 10% fetal bovine serum and 50&#x02009;&#x003BC;g/ml gentamicin (PAA, Pasching, Austria). The human gastric adenocarcinoma cell line AGS (ATCC CRL-1739&#x02122;) was cultivated in RPMI 1640 medium, which was supplemented with 10% fetal calf serum (Gibco, Paisley, UK). Cells were cultivated at 37&#x000B0;C and 5.3% (v/v) CO<sub>2</sub> and subcultivated in a ratio of 1:3&#x02013;1:5 every 2&#x02013;3&#x02009;days at a confluence of 70% to 90%. The <italic>H. pylori</italic> strains P12 WT and P12&#x00394;<italic>cagL</italic> were generated and grown as described (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>). To complement the P12&#x00394;<italic>cagL</italic> mutant strain, genes encoding CagL<sup>WT</sup> or CagL mutant proteins were introduced into the chromosomal <italic>ureA</italic> locus, using a pAD1-derived plasmid. CagL proteins expressed from the <italic>ureA</italic> promoter contain a hemagglutinin (HA) tag introduced following the signal sequence at amino acid position 22 (Shaffer et al., <xref ref-type="bibr" rid="B38">2011</xref>). For infection, <italic>H. pylori</italic> were grown for 2&#x02009;days in thin layers and added at a multiplicity of infection (MOI) of 50 or 100 (Selbach et al., <xref ref-type="bibr" rid="B37">2002</xref>; Moese et al., <xref ref-type="bibr" rid="B29">2004</xref>). The number of elongated AGS cells in each experiment was quantified in 10 different 0.25&#x02009;mm<sup>2</sup> fields (Tegtmeyer et al., <xref ref-type="bibr" rid="B44">2011b</xref>). All experiments were done in triplicate.</p>
</sec>
<sec>
<title>CagL protein expression and purification</title>
<p>CagL<sup>WT</sup> and mutants were expressed as C-terminal His-tag fusions in vector pET28a (Novagen<sup>&#x000AE;</sup>, Merck, Darmstadt, Germany) and purified as described earlier (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>). Briefly, <italic>E. coli</italic> ER2566 (NEB, Ipswich, USA) transformed with the plasmids were grown in 10&#x02009;ml LB medium at 37&#x000B0;C. After overnight incubation, 500&#x02009;ml of fresh LB medium were added and shaken for another 2.5&#x02013;3&#x02009;h until reaching OD<sub>600</sub>&#x02009;&#x0003D;&#x02009;1. Then 300&#x02009;&#x003BC;l of a 1-mM IPTG stock solution was added and the bacteria were grown for 1.5&#x02009;h to induce CagL expression. Bacterial pellets were collected by centrifugation and then resuspended in ice-cold buffer CW (50&#x02009;mM KH<sub>2</sub>PO<sub>4</sub>&#x02013;K<sub>2</sub>HPO<sub>4</sub>, pH 7.5, 200&#x02009;mM NaCl) supplemented with 20&#x02009;&#x003BC;M PMSF. After lysis using a French Press, the overexpressed CagL present in the inclusion bodies was solubilized in buffer LW (50&#x02009;mM KH<sub>2</sub>PO<sub>4</sub>&#x02013;K<sub>2</sub>HPO<sub>4</sub>, pH 7.5, 200&#x02009;mM NaCl, 6&#x02009;M guanidine hydrochloride) and refolded by a rapid dilution approach in ice-cold refolding buffer (50&#x02009;mM Tris&#x02013;HCl, pH 8.2, 20&#x02009;mM NaCl, 0.1&#x02009;mM KCl, 1&#x02009;mM EDTA, 2&#x02009;mM reduced glutathione, 0.2&#x02009;mM oxidized glutathione) using a dual-channel syringe pump (KD Scientific Inc., Holliston, USA) with a flow of 0.1&#x02009;ml/min. After refolding, CagL was further purified by metal-chelate affinity chromatography through Talon<sup>&#x000AE;</sup> resin (BD Biosciences). Protein concentrations of the resultant samples were determined by NanoDrop 1000 (Thermo Scientific, Waltman, USA) and typically yielded a total amount of about 1.5&#x02009;mg CagL in 10&#x02009;ml buffer. Purification of CagL was judged to be of &#x0003E;95% homogeneity by SDS-PAGE/Coomassie Blue staining. The folded conformation of the purified CagL proteins was subsequently confirmed by circular dichroism (CD) as described below.</p>
</sec>
<sec>
<title>Site-directed mutagenesis</title>
<p>Site-directed mutagenesis of CagL was performed using the corresponding pET28a or pAD1 vectors as DNA template (Table <xref ref-type="table" rid="T1">1</xref>). For amplification, Phusion<sup>&#x000AE;</sup> High-Fidelity DNA Polymerase (NEB, Ipswich, USA) was used, followed by PCR purification (MinElute PCR Purification Kit, Qiagen, Hilden, Germany), digestion with <italic>Dpn</italic>I (Promega, Madison, USA), and ligation using T4 DNA Ligase (Promega). Re-sequencing and Western blotting of <italic>E. coli</italic> or <italic>H. pylori</italic> strains, respectively, verified the appropriate expression of CagL in the resulting plasmids.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p><bold>Primers used for generating the different CagL mutants</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left">Protein</th>
<th align="left"/>
<th align="left">Primers</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">CagL<sup>F86A</sup></td>
<td align="left"><italic>fw</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-GCC GAA GCG AAT GAG TTA TTT T</td>
</tr>
<tr>
<td align="left"/>
<td align="left"><italic>rv</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-ATT GGC TTT CAA TAA CGC TAA ATC</td>
</tr>
<tr>
<td align="left">CagL<sup>E87A</sup></td>
<td align="left"><italic>fw</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-GCG AAT GAG TTA TTT TTC ATC TCA G</td>
</tr>
<tr>
<td align="left"/>
<td align="left"><italic>rv</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-TGC AAA ATT GGC TTT CAA TAA CGC TA</td>
</tr>
<tr>
<td align="left">CagL<sup>E87A/A88E</sup></td>
<td align="left"><italic>fw</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-GCG AAT GAG TTA TTT TTC ATC TCA GAA</td>
</tr>
<tr>
<td align="left"/>
<td align="left"><italic>rv</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-TC AAA ATT GGC TTT CAA TAA CGC TAA</td>
</tr>
<tr>
<td align="left">CagL<sup>N89A</sup></td>
<td align="left"><italic>fw</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-GCT GAG TTA TTT TTC ATC TCA GAA</td>
</tr>
<tr>
<td align="left"/>
<td align="left"><italic>rv</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-CGC TTC AAA ATT GGC TTT CAA TAA</td>
</tr>
<tr>
<td align="left">CagL<sup>E90A</sup></td>
<td align="left"><italic>fw</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-GTT ATT TTT CAT CTC AGA AGA TGT</td>
</tr>
<tr>
<td align="left"/>
<td align="left"><italic>rv</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-GCA TTC GCT TCA AAA TTG GC</td>
</tr>
<tr>
<td align="left">CagL<sup>Q40A</sup></td>
<td align="left"><italic>fw</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-GTG CTC AAA AAC TTA GAT GAG ATT TTT TCA</td>
</tr>
<tr>
<td align="left"/>
<td align="left"><italic>rv</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-TGC TTG GTT GGT CTC TTG GTA G</td>
</tr>
<tr>
<td align="left">CagL<sup>A84E/E87A</sup></td>
<td align="left"><italic>fw</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-TTT GCA GCG AAT GAG TTA TTT TTC</td>
</tr>
<tr>
<td align="left"/>
<td align="left"><italic>rv</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-ATT CTC TTT CAA TAA CGC TAA ATC TC</td>
</tr>
<tr>
<td align="left">CagL<sup>A88E/L91A</sup></td>
<td align="left"><italic>fw</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-GAG GCA TTT TTC ATC TCA GAA GAT G</td>
</tr>
<tr>
<td align="left"/>
<td align="left"><italic>rv</italic></td>
<td align="left">5&#x02032;-<italic>Pho</italic>-ATT CTC TTC AAA ATT GGC TTT CAA</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec>
<title>Cell adhesion assays with WM-115 cells</title>
<p>The cell adhesion assays to immobilized CagL proteins were performed as described previously (Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>). A 96 well microtiter plate (Nunc Maxisorp&#x02122;, Thermo Fisher Scientific Inc., Waltham, USA) was coated with 100&#x02009;&#x003BC;l of protein solution (CagL<sup>WT</sup> or mutant; 10&#x02013;20&#x02009;&#x003BC;g/ml) per well, and immobilized for 18&#x02009;h at 37&#x000B0;C. The solution was aspirated and free binding sites were blocked with 100&#x02009;&#x003BC;l of a solution, consisting of 2% (w/v) fatty acid-free BSA (PAA, Pasching, Austria) in PBS for 1&#x02009;h at 37&#x000B0;C. The adhesion assays were performed with WM-115 human epithelial cancer cells. This cell line was chosen for the cell adhesion assays due to a constitutive expression of integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, &#x003B1;<sub>V</sub>&#x003B2;<sub>3</sub>, and &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub>, and was shown to display reproducible adherence to CagL and fibronectin (Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>). The WM-115 cells were cultivated to a confluence of 70%, and detached with Trypsin-EDTA (0.05/0.02% in D-PBS; PAA, Pasching, Austria). After washing with DMEM medium, the cells were resuspended in DMEM medium with 1&#x02009;mg/ml fluorescein diacetate (Sigma-Aldrich, St. Louis, USA), adjusted to a cell density of 1&#x02009;&#x000D7;&#x02009;10<sup>5</sup>&#x02009;cells/ml and incubated at 37&#x000B0;C for 30&#x02009;min under steady shaking. Two DMEM washing steps were performed to remove excess fluorescein diacetate. The cells were resuspended in DMEM medium containing divalent cations Ca<sup>2&#x0002B;</sup> and Mg<sup>2&#x0002B;</sup> (2&#x02009;nM) to a cell density of 1&#x02009;&#x000D7;&#x02009;10<sup>5</sup>&#x02009;cells/ml and incubated in the dark on ice for 30&#x02009;min. Subsequently, the cell solution was distributed into solutions of peptides ranging in concentrations of millimolar to nanomolar, and the resulting mixtures were incubated at 37&#x000B0;C for 30&#x02009;min. The solutions were then dispensed on the coated microtiter plate (5&#x02009;&#x000D7;&#x02009;10<sup>3</sup>&#x02009;cells/well) and incubated for 1&#x02009;h at 37&#x000B0;C. After several washing steps the fluorescence of cells, adherent to the immobilized CagL, was measured (&#x003BB;<sub>ex</sub> 485&#x02009;nm; &#x003BB;<sub>em</sub> 514&#x02009;nm) using an Infinite 200 Microplate Reader (Tecan, M&#x000E4;nnedorf, Switzerland). The inhibition concentration IC<sub>50</sub>, confidence interval CI<sub>95%</sub>, and the square of the correlation coefficient <italic>R</italic><sup>2</sup> values were evaluated. To test the accuracy of the fit model for the non-linear regression a &#x0201C;Runs test&#x0201D; was performed and high <italic>P</italic>-values were obtained for all measurements (data not shown), which support the chosen regression model. All evaluation was performed using the GraphPad Prism 4.03 Software (GraphPad, San Diego, USA).</p>
</sec>
<sec>
<title><italic>Helicobacter pylori</italic> binding to AGS cells</title>
<p>Infection of AGS at a density of 3.2&#x02009;&#x000D7;&#x02009;10<sup>5</sup>&#x02009;cells/well was performed using a MOI of 50 or 100 per <italic>H. pylori</italic> strain (Kwok et al., <xref ref-type="bibr" rid="B24">2002</xref>). After infection for 4&#x02009;h, the AGS-bacterium co-cultures were washed three times with 1&#x02009;ml of pre-warmed RPMI medium per well to remove non-adherent bacteria. To determine the total number of colony forming units (CFU) corresponding to host-bound <italic>H. pylori</italic>, the infected monolayers were incubated with 1&#x02009;ml of 0.1% saponin in PBS at 37&#x000B0;C for 15&#x02009;min. The resulting suspensions were diluted and incubated on GC agar plates as described (Kwok et al., <xref ref-type="bibr" rid="B24">2002</xref>). The total CFU of cell-bound <italic>H. pylori</italic> are given as CFU per well of AGS cells.</p>
</sec>
<sec>
<title>CagL peptide synthesis</title>
<p>All Fmoc-&#x003B1;-amino acids (9-fluorenylmethylcarbonyl-protected &#x003B1;-amino acids) were purchased from IRIS Biotech (Marktredwitz, Germany) and Advanced ChemTech (Louisville, USA). MALDI-ToF MS analyses were performed on a Voyager-DE (Perseptive Biosystems, Foster City, USA) using 2,5-dihydrobenzoic acid as the matrix. The analytical RP-HPLC was performed with UV detection at 220&#x02009;nm and the following elution gradients: eluent A: 95% water, 5% acetonitrile, 0.1% TFA; Eluent B: 95% acetonitrile, 5% water, 0.1% TFA; 0.7&#x02009;ml&#x02009;min<sup>&#x02212;1</sup>, 0&#x02013;5&#x02009;min 100% A&#x02009;&#x02192;&#x02009;100% B; 5&#x02013;6&#x02009;min 100% B&#x02009;&#x02192;&#x02009;100% A; 6&#x02013;6.5&#x02009;min 100% A (Thermo Separation Products apparatus equipped with a Hypersil Gold (3&#x02009;&#x003BC;m, 150&#x02009;mm&#x02009;&#x000D7;&#x02009;2.1&#x02009;mm) column (Thermo Fisher Scientific, Waltham, USA). Preparative RP-HPLC was performed on a Thermo Separation Products apparatus equipped with a Jupiter C18 (350&#x02009;&#x000C5;, 10&#x02009;&#x003BC;m, 250&#x02009;mm&#x02009;&#x000D7;&#x02009;21.2&#x02009;mm) efficiency column (Phenomenex, Torrance, USA) with water/acetonitrile gradients as the eluent and UV detection at 220&#x02009;nm. Linear peptides were synthesized by solid phase peptide synthesis on a Liberty 12 channel microwave-assisted automated peptide synthesizer (CEM, Matthews, USA) according to a Fmoc-protocol with 2-chlorotrityl resin (IRIS Biotech) as solid support. The resin loading was 0.8&#x02009;mmol/g. The C-terminal resin bound amino acids were Phe for cyclopeptides-2 to -5, <sc>d</sc>-Phe for cyclopeptide-1, and Val for the linear peptide 6. Peptide coupling was performed with three equivalents of Fmoc-amino acid (0.5&#x02009;M in DMF), three equivalents TBTU (3-[bis-(dimethylamino)methyliumyl]-3<italic>H</italic>-benzotriazol-1-oxide; 0.5&#x02009;M in DMF; dimethylformamide), and six equivalents DIPEA [diisopropylethylamine; 2&#x02009;M in NMP (1-methyl-2-pyrrolidone)]. After washing with DMF the Fmoc group was cleaved with a solution of 20% piperidine in DMF. After synthesis of the bound linear peptides, resin cleavage was performed with 1% TFA (trifluoroacetic acid) in dichloromethane (10 times for 5&#x02009;min each). The peptides one to five were cyclized under pseudo-high dilution conditions (Malesevic et al., <xref ref-type="bibr" rid="B27">2004</xref>). For slow reagent addition a dual-channel syringe pump (KD Scientific Inc., Holliston, USA) was used. 200&#x02009;&#x003BC;mol of linear precursor were dissolved in 20&#x02009;ml DMF, and 600&#x02009;&#x003BC;mol HATU (1-[bis-(dimethylamino) methyliumyl]-1<italic>H</italic>-1,2,3-triazolo[4,5-<italic>b</italic>]pyridine-3-oxide) were dissolved in the same volume of DMF. Each solution was transferred into a syringe, and both solutions simultaneously were added to a stirred solution of 1200&#x02009;&#x003BC;mol DIPEA and 20&#x02009;&#x003BC;mol HATU in 10&#x02009;ml DMF at a rate of 1.00&#x02009;ml/h (Malesevic et al., <xref ref-type="bibr" rid="B27">2004</xref>). Finally, the mixture was stirred for further 15&#x02009;min, and the solvent was evaporated under reduced pressure at a temperature below 30&#x000B0;C. Peptide purification was carried out using preparative RP-HPLC. Deprotection of the cyclic peptides took place in a mixture of TFA (95%), TIS (triisopropylsilane; 2.5%), and water (2.5%), with shaking at room temperature for 2&#x02009;h. The solvent was evaporated and cold diethyl ether (30&#x02009;ml) was added to the residue. After centrifugation for 1&#x02009;h at 0&#x000B0;C and 4000&#x02009;&#x000D7;&#x02009;<italic>g</italic>, diethyl ether was decanted and the residue was dissolved in water, lyophilized, and purified by preparative RP-HPLC. The yield and purity of the synthesized peptides are given in Table <xref ref-type="table" rid="T2">2</xref>.</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p><bold>Characteristics of synthesized CagL peptides</bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left">Peptide</th>
<th align="left">Sequence</th>
<th align="left">Yield (%)</th>
<th align="left">Purity<xref ref-type="table-fn" rid="tfn1"><sup>a</sup></xref> (%)</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">1</td>
<td align="left">c-(-fEANE-)</td>
<td align="left">13.6</td>
<td align="left">&#x0003E;96</td>
</tr>
<tr>
<td align="left">2</td>
<td align="left">c-(-FeANE-)</td>
<td align="left">8.0</td>
<td align="left">&#x0003E;99</td>
</tr>
<tr>
<td align="left">3</td>
<td align="left">c-(-FEaNE-)</td>
<td align="left">8.0</td>
<td align="left">&#x0003E;95</td>
</tr>
<tr>
<td align="left">4</td>
<td align="left">c-(-FEAnE-)</td>
<td align="left">4.0</td>
<td align="left">&#x0003E;99</td>
</tr>
<tr>
<td align="left">5</td>
<td align="left">c-(-FEANe-)</td>
<td align="left">16.8</td>
<td align="left">&#x0003E;99</td>
</tr>
<tr>
<td align="left">6</td>
<td align="left">ANFEANELFFISEDV</td>
<td align="left">2.1</td>
<td align="left">&#x0003E;94</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn1"><p><italic><sup>a</sup>The purity of each peptide was confirmed by analytical HPLC. <sc>d</sc>-amino acids are given in small letters</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec>
<title>CagL peptide SPOT arrays</title>
<p>The CagL peptide arrays were generated by the SPOT-synthesis technique as described earlier (Beutling et al., <xref ref-type="bibr" rid="B10">2008</xref>). Briefly, the indicated peptides in Figure <xref ref-type="fig" rid="F5">5</xref> were synthesized on an amino-functionalized cellulose membrane using Fmoc/<italic>tert</italic>-butyl chemistry. The spots consist of &#x0223C;5&#x02009;nmol of each peptide (Dikmans et al., <xref ref-type="bibr" rid="B14">2006</xref>). For the binding assays, the peptide arrays were blocked overnight at room temperature with blocking buffer consisting of 2&#x000D7; blocking buffer concentrate (Sigma-Aldrich, St. Louis, MO/USA) and 5% (w/v) sucrose in TBS-T (0.02&#x02009;M sodium phosphate buffer with 0.15M sodium chloride (pH 7), 0.05% Tween 20). Approximately 1&#x02009;&#x003BC;g of purified integrins &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, &#x003B1;<sub>V</sub>&#x003B2;<sub>3</sub>, and &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub> (Chemicon-Millipore, Billerica, MA, USA) in blocking buffer was added to CagL peptide arrays for 4&#x02009;h at room temperature. Next, the arrays were washed with a 10-fold volume of TBS-T three times and then incubated with &#x003B1;-integrin-&#x003B2;<sub>1</sub>, &#x003B1;-integrin-&#x003B1;<sub>v</sub>, or &#x003B1;-integrin-&#x003B2;<sub>5</sub> antibodies (Santa Cruz, Santa Cruz, USA). Finally, a chemiluminescence reaction using the ECL Plus kit (Amersham Pharmacia Biotech, Buckinghamshire, UK) was performed as described below for Western blotting.</p>
</sec>
<sec>
<title>Circular dichroism spectroscopy</title>
<p>Circular dichroism spectroscopy was performed on a Jasco J-810 spectrometer (Jasco, Gro&#x000DF;-Umstadt, Germany). For the CD measurements of the CagL proteins a buffer containing 5&#x02009;mM NaCl and 10&#x02009;mM Na<sub>2</sub>HPO<sub>4</sub> (pH 7.4) was used. The CagL<sup>WT</sup> and all mutants were measured in a 1-mm quartz cuvette, adjusted to a concentration of 3.9&#x02009;nM. The secondary structure was evaluated using the deconvolution function of the Spectra Manager II Software (Jasco) based on CDPro structure analysis methods using Yang&#x02019;s references (Yang et al., <xref ref-type="bibr" rid="B49">1986</xref>; Sreerama and Woody, <xref ref-type="bibr" rid="B39">2004</xref>).</p>
</sec>
<sec>
<title>Antibodies and western blotting</title>
<p>Treated/infected cells were harvested in ice-cold PBS containing 1&#x02009;mM Na<sub>3</sub>VO<sub>4</sub> (Sigma-Aldrich). Western blotting was done as previously described (Tegtmeyer et al., <xref ref-type="bibr" rid="B45">2009</xref>). Rabbit &#x003B1;-CagL antiserum was raised against the C-terminal peptide (C-RSLEQSKRQYLQER) of the protein and was prepared by Biogenes (Berlin, Germany). The &#x003B1;-HA-tag antibody (Invitrogen, Darmstadt, Germany) was also used to detect tagged CagL. The pan-&#x003B1;-phospho-tyrosine antibody PY-99 (Santa Cruz) and &#x003B1;-CagA (Austral Biologicals, San Ramon, CA, USA) were used to investigate the phosphorylation of CagA. The polyclonal &#x003B1;-phospho-ERK1/2-PT202/PY-204 antibody was purchased from NEB (Frankfurt, Germany). The polyclonal &#x003B1;-phospho-Cortactin-PS-405 antibody was described recently (Tegtmeyer et al., <xref ref-type="bibr" rid="B44">2011b</xref>). The &#x003B1;-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) antibody (Santa Cruz) served as loading control in each Western blot. As secondary antibodies, horseradish peroxidase conjugated &#x003B1;-mouse, &#x003B1;-rabbit, or &#x003B1;-goat polyvalent sheep immunoglobulin were used and antibody detection was performed with the ECL Plus chemiluminescence kit (Amersham Pharmacia Biotech). Band intensities and corresponding kinase activities were quantitated with the Lumi-Imager F1 (Roche Diagnostics, Mannheim, Germany).</p>
</sec>
<sec>
<title>Statistical analysis</title>
<p>All data were evaluated using Student <italic>t</italic>-test with SigmaStat statistical software (version 2.0). Statistical significance was defined by <italic>P</italic>&#x02009;&#x02264;&#x02009;0.05 (&#x0002A;) and <italic>P</italic>&#x02009;&#x02264;&#x02009;0.005 (&#x0002A;&#x0002A;). All error bars shown in figures and those quoted following the &#x000B1; signs represent standard deviation.</p>
</sec>
</sec>
<sec>
<title>Results</title>
<sec>
<title>Synthetic RHS-cyclopeptides influence WM-115 cell adhesion to immobilized CagL mutants</title>
<p>Previous studies indicated that the RGD sequence in CagL is important but not sufficient to trigger host cell receptor binding and signaling (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>; Tegtmeyer et al., <xref ref-type="bibr" rid="B42">2010</xref>; Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>; Wiedemann et al., <xref ref-type="bibr" rid="B48">2012</xref>). The recently published 3D homology model of CagL (Backert et al., <xref ref-type="bibr" rid="B6">2008</xref>) was screened for other surface exposed amino acid sequences to further explore the hypothesis that other CagL features besides the RGD sequence might be important for integrin interactions. Among other possible motifs that are surface exposed and with an orientation that is directed to the plausible CagL&#x02013;integrin interaction site, the so-called RHS motif in proximity to the RGD motif (Figure <xref ref-type="fig" rid="F1">1</xref>) was identified as a candidate for host interaction. A series of five cyclopeptides comprising the RHS sequence was designed and synthesized to mimic the exposed motif in CagL (Figure <xref ref-type="fig" rid="F1">1</xref>). According to the spatial screening approach each of the five amino acids was mutually replaced by its <sc>d</sc>-configured counterpart to stabilize the overall conformation and increase the spatial peptide backbone diversity (Tables <xref ref-type="table" rid="T2">2</xref> and <xref ref-type="table" rid="T3">3</xref>). None of the cyclopeptides-1 to -5 inhibited WM-115 cell adhesion to immobilized CagL<sup>WT</sup> (IC<sub>50</sub>&#x02009;&#x0003E;&#x02009;1&#x02009;mM; Table <xref ref-type="table" rid="T3">3</xref>). However, WM-115 cell adhesion to the mutant CagL<sup>RAD</sup> was inhibited by cyclopeptide-2 [c-(-FeANE-)] with an IC<sub>50</sub> value in the range of 54&#x02013;430&#x02009;&#x003BC;M (Table <xref ref-type="table" rid="T3">3</xref>). In addition, cyclopeptides-1 and -2 displayed weak inhibition of WM-115 cell adhesion to the mutant CagL<sup>RGA</sup> with IC<sub>50</sub> values of 43&#x02013;340 and 30&#x02013;530&#x02009;&#x003BC;M, respectively. The other cyclopeptides-3 to -5 did not display any significant effect on the WM-115&#x02013;CagL interaction (IC<sub>50</sub>&#x02009;&#x0003E;&#x02009;1&#x02009;mM; Table <xref ref-type="table" rid="T3">3</xref>).</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p><bold>Computational 3D-structure model of CagL<sup>WT</sup> with highlighted motifs of interest</bold>. The ribbon diagram of CagL shown in this figure consists of three major helices and a globular domain with the exposed RGD motif highlighted in the front. The second highlighted FEANE sequence (here called RHS motif) is shown in a flexible loop, also exposed at the surface. The CagL homology model is derived from the VirB5 ortholog TraC protein (PDB: 1R8I) encoded in plasmid pKM101 (Yeo et al., <xref ref-type="bibr" rid="B50">2003</xref>; Backert et al., <xref ref-type="bibr" rid="B6">2008</xref>).</p></caption>
<graphic xlink:href="fcimb-02-00070-g001.tif"/>
</fig>
<table-wrap position="float" id="T3">
<label>Table 3</label>
<caption><p><bold>Inhibition of WM-115 cell adhesion to CagL by synthetic peptides<xref ref-type="table-fn" rid="tfn2"><sup>a</sup></xref></bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th colspan="2" align="center">Peptide</th>
<th align="left">CagL<sup>WT</sup> IC<sub>50</sub></th>
<th align="left">CagL<sup>RGA</sup> IC<sub>50</sub></th>
<th align="left">CagL<sup>RAD</sup> IC<sub>50</sub></th>
</tr>
<tr>
<th colspan="2" align="left"/>
<th align="left">(CI<sub>95%</sub>); <italic>R</italic><sup>2</sup></th>
<th align="left">(CI<sub>95%</sub>); <italic>R</italic><sup>2</sup></th>
<th align="left">(CI<sub>95%</sub>); <italic>R</italic><sup>2</sup></th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">1</td>
<td align="left">c-(-fEANE-)</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
<td align="left">43&#x02013;340&#x02009;&#x003BC;M</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
</tr>
<tr>
<td align="left">2</td>
<td align="left">c-(-FeANE-)</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
<td align="left">30&#x02013;530&#x02009;&#x003BC;M</td>
<td align="left">54&#x02013;430&#x02009;&#x003BC;M</td>
</tr>
<tr>
<td align="left">3</td>
<td align="left">c-(-FEaNE-)</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
</tr>
<tr>
<td align="left">4</td>
<td align="left">c-(-FEAnE-)</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
</tr>
<tr>
<td align="left">5</td>
<td align="left">c-(-FEANe-)</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
</tr>
<tr>
<td align="left">6</td>
<td align="left">ANFEANELFFISEDV</td>
<td align="left">&#x0003E;1&#x02009;mM</td>
<td align="left">9 (6&#x02013;15)&#x02009;&#x003BC;M; 0.76</td>
<td align="left">239 (164&#x02013;346)&#x02009;&#x003BC;M; 0.88</td>
</tr>
<tr>
<td align="left">7</td>
<td align="left">c-(-RGDlA-)</td>
<td align="left">2.31 (1.40&#x02013;3.82)&#x02009;&#x003BC;M; 0.89</td>
<td align="left">1.63 (1.01&#x02013;2.63)&#x02009;&#x003BC;M; 0.93</td>
<td align="left">0.91 (0.58&#x02013;1.43)&#x02009;&#x003BC;M; 0.94</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn2"><p><italic><sup>a</sup>The IC<sub>50</sub> values of cyclic peptides one to five are given in ranges, due to weak inhibition properties giving fluctuating results. <sc>d</sc>-Amino acids are given in small letters. CI<sub>95%</sub>, confidence interval; <italic>R</italic><sup>2</sup>, squared correlation coefficient</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec>
<title>A linear RHS 15-mer peptide interferes with WM-115 adhesion to the CagL<sup>RAD</sup> and CagL<sup>RGA</sup> mutants</title>
<p>In addition, cell adhesion assays were performed to investigate whether the linear peptide 6 (ANFEANELFFISEDV) has effects on the adhesion of WM-115 cells to immobilized CagL<sup>WT</sup> and its RGD mutants CagL<sup>RGA</sup> and CagL<sup>RAD</sup>. Linear peptide 6 mimics the RHS motif with the Phe-Glu-Ala-Asn-Glu sequence and its adjacent amino acids within the CagL protein sequence (Figure <xref ref-type="fig" rid="F1">1</xref>). According to its CD spectrum, it does not adopt a discrete conformation in solution (data not shown). While linear peptide 6 did not significantly interfere with CagL<sup>WT</sup>&#x02013;WM-115 interaction in the cell adhesion assay (IC<sub>50</sub>: &#x0003E;1&#x02009;mM), it exhibited a slight inhibitory activity on the CagL<sup>RAD</sup>&#x02013;WM-115 interaction (IC<sub>50</sub>: 239&#x02009;&#x003BC;M; CI<sub>95%</sub>: 164&#x02013;346&#x02009;&#x003BC;M; <italic>R</italic><sup>2</sup>: 0.88) and the CagL<sup>RGA</sup>&#x02013;WM-115 interaction with an IC<sub>50</sub> of 9&#x02009;&#x003BC;M (CI<sub>95%</sub>: 6&#x02013;15&#x02009;&#x003BC;M; <italic>R</italic><sup>2</sup>: 0.76; Figure <xref ref-type="fig" rid="F2">2</xref>; Table <xref ref-type="table" rid="T3">3</xref>). In comparison to the properties of the earlier mentioned c-(-RGDlA-) peptide to inhibit the WM-115 cell adhesion to CagL<sup>WT</sup> (IC<sub>50</sub>: 2.31&#x02009;&#x003BC;M; CI<sub>95%</sub>: 1.40&#x02013;3.82&#x02009;&#x003BC;M; <italic>R</italic><sup>2</sup>: 0.89) and its RGD mutants CagL<sup>RGA</sup> (IC<sub>50</sub>: 1.63&#x02009;&#x003BC;M; CI<sub>95%</sub>: 1.01&#x02013;2.63&#x02009;&#x003BC;M; <italic>R</italic><sup>2</sup>: 0.93) and CagL<sup>RAD</sup> (IC<sub>50</sub>: 0.91&#x02009;&#x003BC;M; CI<sub>95%</sub>: 0.58&#x02013;1.43&#x02009;&#x003BC;M; <italic>R</italic><sup>2</sup>: 0.94), the inhibition properties of the linear peptide 6 are obviously reduced (Table <xref ref-type="table" rid="T3">3</xref>). Nonetheless the results support involvement of the RHS motif in CagL&#x02013;WM-115 interaction.</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p><bold>Dose&#x02013;response curve of a linear RHS motif-containing peptide, inhibiting binding of WM-115 cells to immobilized CagL<sup>WT</sup> and mutants</bold>. The WM-115 cells were pre-incubated in different concentrations of the linear 15-mer peptide ANFEANELFFISEDV, which mimics the exposed RHS motif of CagL. Purified CagL<sup>WT</sup> and the CagL<sup>RAD</sup> and CagL<sup>RGA</sup> mutants were immobilized on plastic surface followed by addition of the WM-115 cells. After 1&#x02009;h of co-incubation, the amounts of attached cells were determined. The data were evaluated using non-linear fit for the evaluation of the potency of peptide ANFEANELFFISEDV to inhibit the binding of WM-115 cells to immobilized CagL.</p></caption>
<graphic xlink:href="fcimb-02-00070-g002.tif"/>
</fig>
</sec>
<sec>
<title>The recombinant CagL mutants are correctly folded</title>
<p>For further investigation of the RHS motif and to reveal the relevance of specific amino acids in this sequence, CagL point mutants were recombinantly produced in <italic>E. coli</italic>, where individual amino acids were replaced by alanine residues (Table <xref ref-type="table" rid="T4">4</xref>). CD spectroscopy was used to verify the correct folding of the mutants CagL<sup>F86A</sup>, CagL<sup>E87A</sup>, CagL<sup>E87A/A88E</sup>, and CagL<sup>E90A</sup> in comparison to CagL<sup>WT</sup>. The secondary structure composition calculated for CagL<sup>WT</sup> is in good accordance with the proposed CagL homology model (Backert et al., <xref ref-type="bibr" rid="B6">2008</xref>) and displays a high content of &#x003B1;-helices (&#x0223C;35%), accompanied by &#x003B2;-strands (&#x0223C;29%, Figure <xref ref-type="fig" rid="F3">3</xref>A). The mutants CagL<sup>F86A</sup>, CagL<sup>E87A</sup>, CagL<sup>E87A/A88E</sup>, and CagL<sup>E90A</sup> CD spectra display comparable curve shapes like the CagL<sup>WT</sup> (Figure <xref ref-type="fig" rid="F3">3</xref>D). Unfortunately, the amount of CagL<sup>N89A</sup> protein necessary to estimate the secondary structure and to validate the correct protein folding with CD spectroscopy could not be obtained and, therefore, could not be included in the study. However, to obtain information on the structural stability and to further compare the CagL<sup>E87A</sup> and CagL<sup>E90A</sup> mutants with CagL<sup>WT</sup>, temperature-interval dependent CD measurements were performed ranging from 0 to 60&#x000B0;C (Figures <xref ref-type="fig" rid="F3">3</xref>A&#x02013;C). In general, all tested proteins behaved in similar manner, exhibiting temperature-dependent denaturation above 40&#x000B0;C. Below 40&#x000B0;C, the secondary structures are comparable, with only minor structural differences. In comparison, the CagL<sup>E90A</sup> CD spectrum shows maximum deviations at temperatures below 20&#x000B0;C (Figure <xref ref-type="fig" rid="F3">3</xref>C). In addition, we performed a pH screening by measuring the CD spectra of CagL<sup>WT</sup> over a pH range from four to nine in phosphate buffer and could show that the protein is very stable under the tested conditions (Figure <xref ref-type="fig" rid="F3">3</xref>E).</p>
<table-wrap position="float" id="T4">
<label>Table 4</label>
<caption><p><bold>Inhibition of WM-115 cell adhesion to CagL mutants by c-(-RGDlA-)<xref ref-type="table-fn" rid="tfn3"><sup>a</sup></xref></bold>.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left">Protein<xref ref-type="table-fn" rid="tfn3"><sup>a</sup></xref></th>
<th align="left">c-(-Arg-Gly-Asp-<sc>d</sc>-Leu-Ala-) peptide IC50 (CI<sub>95%</sub>); <italic>R</italic><sup>2</sup></th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">CagL<sup>WT</sup></td>
<td align="left">2.31 (1.40&#x02013;3.82) &#x003BC;M; 0.89</td>
</tr>
<tr>
<td align="left">CagL<sup>RAD</sup></td>
<td align="left">1.63 (1.01&#x02013;2.63) &#x003BC;M; 0.93</td>
</tr>
<tr>
<td align="left">CagL<sup>RGA</sup></td>
<td align="left">0.91 (0.58&#x02013;1.43) &#x003BC;M; 0.94</td>
</tr>
<tr>
<td align="left">CagL<sup>F86A</sup></td>
<td align="left">2.39 (1.87&#x02013;3.04) &#x003BC;M; 0.91</td>
</tr>
<tr>
<td align="left">CagL<sup>E87A</sup></td>
<td align="left">0.67 (0.38&#x02013;1.18) &#x003BC;M; 0.72</td>
</tr>
<tr>
<td align="left">CagL<sup>E87A/A88E</sup></td>
<td align="left">No integrin affinity observed</td>
</tr>
<tr>
<td align="left">CagL<sup>N89A</sup></td>
<td align="left">No data for evaluation</td>
</tr>
<tr>
<td align="left">CagL<sup>E90A</sup></td>
<td align="left">0.88 (0.58&#x02013;1.35) &#x003BC;M; 0.80</td>
</tr>
<tr>
<td align="left">CagL<sup>Q40A</sup></td>
<td align="left">1.65 (1.06&#x02013;2.55) &#x003BC;M; 0.92</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn3"><p><italic><sup>a</sup>Measurements of peptide c-(-RGDlA-) for CagL<sup>E87A</sup> and CagL<sup>E90A</sup> proteins exhibit decreased IC<sub>50</sub> values, indicating an integrin affinity loss for both CagL mutants. <sc>d</sc>-Amino acids are given in small letters. CI<sub>95%</sub>, confidence interval; <italic>R</italic><sup>2</sup>, squared correlation coefficient</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p><bold>Structural evaluation of purified CagL proteins with CD spectroscopy</bold>. <bold>(A)</bold> The CagL<sup>WT</sup> secondary structure was evaluated as described previously (Yang et al., <xref ref-type="bibr" rid="B49">1986</xref>). <bold>(A&#x02013;C)</bold> The temperature-dependent structure stability of the mutants CagL<sup>E87A</sup>, CagL<sup>E90A</sup>, and the CagL<sup>WT</sup> protein was evaluated in CD measurements. <bold>(D)</bold> Secondary structure of CagL<sup>WT</sup> and mutants CagL<sup>F86A</sup>, CagL<sup>E87A</sup>, CagL<sup>E87A/A88E</sup>, and CagL<sup>E90A</sup> were evaluated to control correct folding of the proteins after expression and purification. <bold>(E)</bold> pH stability of CagL<sup>WT</sup> in the pH range four to nine.</p></caption>
<graphic xlink:href="fcimb-02-00070-g003.tif"/>
</fig>
</sec>
<sec>
<title>WM-115 cell adhesion studies with CagL RHS mutants</title>
<p>Different CagL mutants with amino acid variations in the RHS motif (CagL<sup>F86A</sup>, CagL<sup>E87A</sup>, and CagL<sup>E90A</sup>) were immobilized and investigated in cell adhesion assays. The WM-115 cells were pre-incubated with the previously described cyclopeptide-7 [c-(-Arg-Gly-Asp-<sc>d</sc>-Leu-Ala-)] in different concentrations from nano- to millimolar ranges to block the RGD-binding site of the integrins. The dose&#x02013;response curves obtained in these assays are shown in Figure <xref ref-type="fig" rid="F4">4</xref>. For comparison, the cell adhesion results of the recently published CagL<sup>WT</sup>, CagL<sup>RGA</sup>, and CagL<sup>RAD</sup> mutants are also given in Table <xref ref-type="table" rid="T4">4</xref> (Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>). Additionally, the CagL<sup>Q40A</sup> mutant was included as a negative control to exclude the possibility that&#x02009;genetic mutations in the CagL sequence may generally lead to loss of function. Cyclopeptide-7 inhibited WM-115 cell adhesion to CagL<sup>Q40A</sup> with an IC<sub>50</sub> value of 1.65&#x02009;&#x003BC;M (CI<sub>95%</sub>&#x02009;&#x0003D;&#x02009;1.06&#x02013;2.55; <italic>R</italic><sup>2</sup>&#x02009;&#x0003D;&#x02009;0.92), while the cell adhesion of WM-115 cells to immobilized CagL<sup>F86A</sup> was inhibited with an IC<sub>50</sub> value of 2.39&#x02009;&#x003BC;M (CI<sub>95%</sub>&#x02009;&#x0003D;&#x02009;1.87&#x02013;3.04&#x02009;&#x003BC;M; <italic>R</italic><sup>2</sup>&#x02009;&#x0003D;&#x02009;0.91), a value that is very similar to that of CagL<sup>WT</sup> (IC<sub>50</sub>&#x02009;&#x0003D;&#x02009;2.31&#x02009;&#x003BC;M; CI<sub>95%</sub>&#x02009;&#x0003D;&#x02009;1.87&#x02013;3.04&#x02009;&#x003BC;M; <italic>R</italic><sup>2</sup>&#x02009;&#x0003D;&#x02009;0.91). Interesting results were observed in the inhibition assays for the mutants CagL<sup>E87A</sup> and CagL<sup>E90A</sup>. WM-115 cell adhesion to immobilized CagL<sup>E87A</sup> was inhibited by cyclopeptide-7 with an IC<sub>50</sub> of 0.67&#x02009;&#x003BC;M (CI<sub>95%</sub>&#x02009;&#x0003D;&#x02009;0.38&#x02013;1.18&#x02009;&#x003BC;M; <italic>R</italic><sup>2</sup>&#x02009;&#x0003D;&#x02009;0.72), the lowest value observed for all CagL mutants investigated (Figure <xref ref-type="fig" rid="F4">4</xref>; Table <xref ref-type="table" rid="T4">4</xref>). The IC<sub>50</sub> value of 0.88&#x02009;&#x003BC;M (CI<sub>95%</sub>&#x02009;&#x0003D;&#x02009;0.58&#x02013;1.35&#x02009;&#x003BC;M; <italic>R</italic><sup>2</sup>&#x02009;&#x0003D;&#x02009;0.80) for the inhibition of WM-115 cell adhesion to immobilized CagL<sup>E90A</sup> by cyclopeptide-7 is similar, and is also comparable to the values observed for CagL<sup>RGA</sup> (0.91&#x02009;&#x003BC;M; Figure <xref ref-type="fig" rid="F4">4</xref>; Table <xref ref-type="table" rid="T4">4</xref>). In an additional experiment we tested the double mutant CagL<sup>E87A/A88E</sup> to reveal more details on the involvement of CagL amino acid Glu<sup>87</sup> in the interaction with WM-115 cells. The double mutant CagL<sup>E87A/A88E</sup> formally is characterized by the shift of an acidic amino acid side chain from position 87 to position 88. The immobilized CagL<sup>E87A/A88E</sup> protein displayed no binding to the WM-115 cells, which may indicate a loss of integrin affinity. In conclusion, the results show remarkably reduced adhesion of WM-115 cells to immobilized CagL<sup>E87A</sup> and CagL<sup>E90A</sup> compared to the CagL<sup>WT</sup>, which implies a participation of the glutamates in the CagL&#x02013;WM-115 interaction.</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p><bold>Dose&#x02013;response curves showing the inhibitory effect of cyclic RGD peptides on WM-115 cell binding to the different immobilized CagL proteins in competitive cell adhesion assays</bold>. The purified CagL<sup>Q40A</sup>, CagL<sup>F86A</sup>, CagL<sup>E87A</sup>, and CagL<sup>E90A</sup> mutant proteins were immobilized on plastic surface. WM-115 cells were pre-incubated with varying concentrations of cyclic peptide c-(-RGDlA-; <sc>d</sc>-amino acids in small letter), which is known to inhibit WM-115 cell binding to immobilized CagL in the low &#x003BC;M range (Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>). Subsequently, the WM-115 cells were incubated with the immobilized CagL mutants. The amount of WM-115 cells bound to immobilized CagL was quantified, and the resulting dose&#x02013;response curves were evaluated with a non-linear fit to determine the binding inhibition potency of peptide c-(-RGDlA-) for the interaction of WM-115 cells with immobilized CagL.</p></caption>
<graphic xlink:href="fcimb-02-00070-g004.tif"/>
</fig>
</sec>
<sec>
<title>Peptide array mapping of the CagL RHS motif for integrin binding</title>
<p>The previously described SPOT technique (Frank, <xref ref-type="bibr" rid="B17">2002</xref>) was applied to identify the CagL amino acid sequence responsible for binding to integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>. Overlapping linear 15-mer peptides derived from the CagL sequence from amino acid position 60&#x02013;104 were chemically synthesized on a cellulose membrane by the SPOT method (Frank, <xref ref-type="bibr" rid="B16">1992</xref>). As shown in Figure <xref ref-type="fig" rid="F5">5</xref>A, adjacent peptides share the same sequence of 12 amino acids but differ by three amino acids at the C- or N-terminal ends, respectively. Purified integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> was incubated with these membranes and the binding was assayed as described in the Section <xref ref-type="sec" rid="s1">&#x0201C;Materials and Methods.&#x0201D;</xref> Figure <xref ref-type="fig" rid="F5">5</xref>B shows that integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> binds to the RGD motif-containing arraypeptides-3 and -4. In addition, a very strong signal for arraypeptide-9 covering the RHS motif was recorded (Figure <xref ref-type="fig" rid="F5">5</xref>B, top and Figure <xref ref-type="fig" rid="F5">5</xref>C). Interestingly, two other FEANE sequence-containing array peptides (-7 and -8) did not bind integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, suggesting that the flanking C-terminal sequences are also important for this interaction. As a control, incubation of the membranes with two other integrins, &#x003B1;<sub>V</sub>&#x003B2;<sub>3</sub> and &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub> also revealed signals for the two RGD containing CagL peptides and some weak signals for arraypeptides-10 or -11, respectively (Figure <xref ref-type="fig" rid="F5">5</xref>B, middle and Figure <xref ref-type="fig" rid="F5">5</xref>C). The mock control blot revealed no signals as expected (Figure <xref ref-type="fig" rid="F5">5</xref>B, bottom).</p>
<fig id="F5" position="float">
<label>Figure 5</label>
<caption><p><bold>Mapping of the RHS motif and flanking CagL sequences in binding to integrins using a peptide array</bold>. <bold>(A)</bold> The design of the array of 15-mer peptides and corresponding CagL amino acid sequences from position 60&#x02013;104 is shown. The RGD and RHS motifs are highlighted with color. <bold>(B)</bold> Purified integrins &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, &#x003B1;<sub>V</sub>&#x003B2;<sub>3</sub>, and &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub> were incubated with these membranes and bound proteins were identified using antibodies as described in Materials and Methods. As a mock control, buffer-treated membranes followed by incubation with an integrin-&#x003B2;<sub>1</sub> antibody revealed no signals, as expected. <bold>(C)</bold> Densitometric measurement of individual spot intensities using the Lumi-Imager F1 (Roche) revealed the relative amount of bound binding partner per given peptide in%. The strongest spot intensity seen was set as 100%.</p></caption>
<graphic xlink:href="fcimb-02-00070-g005.tif"/>
</fig>
</sec>
<sec>
<title>Generation of RHS point mutations of CagL in <italic>H. pylori</italic></title>
<p>To investigate the importance of the RHS motif in CagL directly during infection with <italic>H. pylori</italic>, two CagL mutants were generated carrying the A84E/E87A and A88E/L91A point mutations. Based on the above described peptide array the two point mutants were constructed to contain one mutation in the RHS sequence and one either N- or C-terminal, to cover additional amino acids that may be relevant for host cell interactions. CagL<sup>WT</sup> and both mutants were chromosomally integrated into a P12&#x00394;<italic>cagL</italic> deletion mutant and expressed as HA-tag fusions in the <italic>ureA</italic> locus as described (Shaffer et al., <xref ref-type="bibr" rid="B38">2011</xref>). The correct expression of each of these CagL variants was verified by Western blotting using an &#x003B1;-HA antibody (Figure <xref ref-type="fig" rid="F6">6</xref>A). The AGS cells were infected with each of these <italic>H. pylori</italic> strains for 4&#x02009;h, followed by analysis of viable bacterial binding to cells, as described in Materials and methods. The results show that each of these strains bound to AGS cells with high efficiency. Some minor differences in binding were seen among the different strains but were not statistically significant (Figure <xref ref-type="fig" rid="F6">6</xref>B). This suggests that mutation of the RHS motif in CagL has no significant inhibitory impact on the overall capacity of the bacteria to bind to AGS host cells.</p>
<fig id="F6" position="float">
<label>Figure 6</label>
<caption><p><bold>Effect of CagL deletion or point mutations in the CagL RHS motif on binding of <italic>H. pylori</italic> to AGS cells</bold>. <bold>(A)</bold> A &#x00394;<italic>cagL</italic> deletion mutant in strain P12 was generated by replacing the <italic>cagL</italic> gene with an <italic>aphA3</italic> cassette. CagL<sup>WT</sup> and two CagL mutants carrying either the A84E/E87A or A88E/L91A point mutations were expressed as HA-tag fusion proteins from genes integrated into the <italic>ureA</italic> locus of the P12&#x00394;<italic>cagL</italic> strain. The correct expression of each of these CagL variants was verified by Western blotting using an &#x003B1;-HA antibody. The &#x003B1;-CagA Western blot was performed as loading control. <bold>(B)</bold> AGS cells were infected with each of these strains for 4&#x02009;h using MOI&#x02009;&#x0003D;&#x02009;100, followed by determination of the amount of viable bound <italic>H. pylori</italic> per input strain. The quantification data indicate that each of these strains bound to AGS cells equally well with high efficiency. No significant differences in results were seen when MOI&#x02009;&#x0003D;&#x02009;50 was used (data not shown).</p></caption>
<graphic xlink:href="fcimb-02-00070-g006.tif"/>
</fig>
</sec>
<sec>
<title>Mutation of the RHS motif inhibits CagA phosphorylation at early times of infection</title>
<p>AGS cells were infected with the different complemented <italic>H. pylori</italic> strains during a time course of 2 and 4&#x02009;h, respectively, to investigate whether strains expressing CagL mutant proteins can trigger the injection and phosphorylation of CagA. The results of the &#x003B1;-phospho-tyrosine and &#x003B1;-CagA specific Western blots show that P12&#x00394;<italic>cagL</italic> re-expressing CagL<sup>WT</sup> can efficiently inject and phosphorylate CagA in a time-dependent fashion (Figures <xref ref-type="fig" rid="F7">7</xref>A,B). Infection of AGS with P12&#x00394;<italic>cagL</italic> expressing the CagL<sup>A84E/E87A</sup> mutant revealed a &#x0223C;46% reduced phospho-CagA signal at 2&#x02009;h, while very strong phospho-CagA signals were produced at the 4-h time point with almost no difference as compared to the complemented CagL<sup>WT</sup> control (Figures <xref ref-type="fig" rid="F7">7</xref>A,B). This suggests that mutation of A84E/E87A in CagL affects the injection and phosphorylation of CagA at very early times of infection. In contrast, infection with <italic>H. pylori</italic> expressing the CagL<sup>A88E/L91A</sup> mutant revealed a stronger reduction of phospho-CagA signals (&#x0223C;69%) at 2&#x02009;h as compared to the complemented CagL<sup>WT</sup> control, while this low level of phospho-CagA did only slightly increase after 4&#x02009;h of infection (Figures <xref ref-type="fig" rid="F7">7</xref>A,B). This result shows that a strain expressing the CagL<sup>A88E/L91A</sup> mutant protein has a significant defect in injection and phosphorylation of CagA at both time points of infection.</p>
<fig id="F7" position="float">
<label>Figure 7</label>
<caption><p><bold>Effects of CagL point mutations in the RHS motif on CagA injection and phosphorylation during <italic>H. pylori</italic> infection of AGS cells</bold>. <bold>(A)</bold> The P12&#x00394;<italic>cagL</italic> deletion mutant was complemented with CagL<sup>WT</sup> or various CagL point mutants. AGS cells were infected with the different indicated <italic>H. pylori</italic> strains (MOI&#x02009;&#x0003D;&#x02009;100) during a time course of 2 or 4&#x02009;h, respectively. The resulting protein lysates were subjected to Western blotting using &#x003B1;-phospho-tyrosine (PY-99) and &#x003B1;-CagA antibodies. The &#x003B1;-GAPDH blot served as loading control in each sample. <bold>(B)</bold> Quantification of CagA phosphorylation. Densitometric measurement of individual band intensities of the &#x003B1;-CagA and &#x003B1;-phospho-tyrosine (PY-99) blots in <bold>(A)</bold> was performed with the Lumi-Imager F1 (Roche). Quantification revealed the relative amount of phospho-CagA per sample in %. Similar inhibitory activities of all mutants were seen when MOI&#x02009;&#x0003D;&#x02009;50 was used (not shown).</p></caption>
<graphic xlink:href="fcimb-02-00070-g007.tif"/>
</fig>
</sec>
<sec>
<title>Mutation of the RHS motif exhibits significant signaling defects in <italic>H. pylori</italic>-induced ERK1/2 activation</title>
<p>Finally the various RHS mutations in CagL were inspected in relation to impacts on cellular downstream signaling involved in the <italic>H. pylori</italic>-induced AGS cell elongation phenotype. It was recently shown that besides CagA phosphorylation, the activation of the ERK1/2 MAP kinase pathway either by <italic>H. pylori</italic> infection (Mimuro et al., <xref ref-type="bibr" rid="B28">2002</xref>; Tegtmeyer et al., <xref ref-type="bibr" rid="B45">2009</xref>) or by transfection CagA in the absence of <italic>H. pylori</italic> (Higashi et al., <xref ref-type="bibr" rid="B22">2004</xref>) is also crucial for phenotypical outcome. Therefore, we tested whether the different CagL-expressing <italic>H. pylori</italic> strains induced the activation of ERK1/2, using the same conditions as described for Figure <xref ref-type="fig" rid="F7">7</xref>. The results of the &#x003B1;-phospho-ERK1/2 Western blots show that P12 WT or P12&#x00394;<italic>cagL</italic> re-expressing CagL<sup>WT</sup> (but not P12&#x00394;<italic>cagL</italic>) can efficiently activate this MAP kinase in a time-dependent fashion (Figures <xref ref-type="fig" rid="F8">8</xref>A,B). Infection of AGS with <italic>H. pylori</italic> expressing the complemented CagL<sup>A84E/E87A</sup> mutant revealed a significantly (46%) reduced phospho-ERK1/2 signal at 2&#x02009;h, and a similarly reduced (38%) phospho-ERK1/2 signal at 4&#x02009;h time point as compared to the complemented CagL<sup>WT</sup> control (Figures <xref ref-type="fig" rid="F8">8</xref>A,B). This suggests that mutation of A84E/E87A in CagL downregulates not only the injection and phosphorylation of CagA, but also reduced the activation of ERK1/2. In addition, infection with <italic>H. pylori</italic> expressing the CagL<sup>A88E/L91A</sup> mutant revealed an even stronger reduction of phospho-ERK1/2 signals by about 63 or 70% at the 2- or 4-h time points, respectively. This result indicates that the CagL<sup>A88E/L91A</sup> mutant has a significantly pronounced defect in activating ERK1/2 during infection.</p>
<fig id="F8" position="float">
<label>Figure 8</label>
<caption><p><bold>Mutation of CagL in specific amino acids within the RHS motif results in defects in <italic>H. pylori</italic>-triggered ERK1/2 activation, cortactin phosphorylation, and AGS cell elongation</bold>. <bold>(A)</bold> AGS cells were infected with the different complemented <italic>H. pylori</italic> strains (MOI&#x02009;&#x0003D;&#x02009;100) during a time course of 2 or 4&#x02009;h, respectively. The same protein lysates as shown in Figure <xref ref-type="fig" rid="F7">7</xref> were subjected to Western blotting using the indicated &#x003B1;-phospho-ERK1/2 and &#x003B1;-phospho-cortactin antibodies. <bold>(B)</bold> Densitometric measurement of individual band intensities of the blots in <bold>(A)</bold> and comparison to total &#x003B1;-ERK1/2 and &#x003B1;-cortactin blots (not shown) was performed with the Lumi-Imager F1 (Roche). The relative amounts of phospho-ERK1/2 and phospho-cortactin per sample were quantified and given in%. <bold>(C)</bold> Quantification of the AGS cell elongation phenotype in the same set of experiments. Similar inhibitory activities of all mutants were seen when MOI&#x02009;&#x0003D;&#x02009;50 was used (not shown).</p></caption>
<graphic xlink:href="fcimb-02-00070-g008.tif"/>
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<sec>
<title>Mutation of the RHS motif results in reduced cortactin serine phosphorylation and AGS cell elongation</title>
<p>Very recently, we demonstrated that one important downstream target of activated ERK1/2 during infection is the actin-binding protein cortactin, phosphorylated at serine residue 405 (Tegtmeyer et al., <xref ref-type="bibr" rid="B44">2011b</xref>). Hence it was tested whether the various CagL-expressing strains induce the phosphorylation of cortactin at S-405 during a time course of 2 and 4&#x02009;h infection. The results of the &#x003B1;-phospho-cortactin Western blots show that P12&#x00394;<italic>cagL</italic> re-expressing CagL<sup>WT</sup> but not P12&#x00394;<italic>cagL</italic> can efficiently phosphorylate cortactin in a time-dependent manner (Figures <xref ref-type="fig" rid="F8">8</xref>A,B). Infection of AGS cells with <italic>H. pylori</italic> expressing either CagL<sup>A84E/E87A</sup> or CagL<sup>A88E/L917A</sup> mutants revealed the induction of phospho-cortactin signals similar to that of CagL<sup>WT</sup> with no significant difference at 2&#x02009;h, but a strongly reduced (about 45&#x02013;46%) phospho-cortactin signal at the 4-h time point (Figures <xref ref-type="fig" rid="F8">8</xref>A,B). This suggests that mutation of CagL in the RHS motif (either A84E/E87A or A88E/L91A mutations) downregulates cortactin&#x02019;s serine phosphorylation to a similar high extent at the 4-h time point, indicating that the CagL<sup>A84E/E87A</sup> and CagL<sup>A88E/L91A</sup> mutants share a significantly pronounced defect in activating cortactin during infection. Finally, the elongation phenotype was monitored in the same set of experiments. As shown in Figure <xref ref-type="fig" rid="F8">8</xref>C, mutation of the RHS motif at A84E/E87A or A88E/L91A inhibited the elongation phenotype by more than 50% at the 2-h time point. At the 4-h time point, the CagL<sup>A84E/E87A</sup> mutant exhibited a &#x0223C;20% reduction and the CagL<sup>A88E/L91A</sup> mutant revealed a &#x0223C;43% reduction as compared to the complemented CagL<sup>WT</sup> control. This set of experiments reveals that mutation of the RHS motif in <italic>H. pylori</italic> results in significant defects in signaling to cortactin and cell elongation, especially at very early times of infection.</p>
</sec>
</sec>
<sec sec-type="discussion">
<title>Discussion</title>
<p>Our previous studies have suggested that the RGD sequence is an important structural motif in the <italic>H. pylori</italic> CagL pilus protein, able to trigger T4SS-mediated host cell binding and signaling, but this sequence alone is not sufficient (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>; Tegtmeyer et al., <xref ref-type="bibr" rid="B42">2010</xref>; Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>; Wiedemann et al., <xref ref-type="bibr" rid="B48">2012</xref>). Thus, we examined the 3D structural CagL model (Backert et al., <xref ref-type="bibr" rid="B6">2008</xref>) to identify other potential surface exposed CagL&#x02013;integrin interaction motifs. In this study, we report on the discovery of a novel motif in CagL, called RHS consisting of a Phe-Glu-Ala-Asn-Glu core sequence, which also plays a role in the interaction with host cell integrins. A peptide array of overlapping 15-mer peptides derived from the CagL primary structure showed that peptides containing the RHS motif of CagL can bind particularly to integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, whereas they bind only weakly to other integrins, such as &#x003B1;<sub>V</sub>&#x003B2;<sub>3</sub> and &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub>. Further studies, including the use of CagL-derived peptides in competitive WM-115 cell binding assays, and the analysis of recombinant CagL point mutants in cell binding <italic>in vitro</italic> and during infection of AGS cells with <italic>H. pylori</italic>, collectively indicated that the RHS sequence plays an important role in the interaction of CagL with host cells.</p>
<p>The spatial screening approach (Haubner et al., <xref ref-type="bibr" rid="B21">1996</xref>; Weide et al., <xref ref-type="bibr" rid="B46">2007</xref>) was employed with five conformationally designed synthesized cyclopeptides-1 to -5, wherein each of the five amino acids was mutually replaced by its <sc>d</sc>-configured correlate to mimic the RHS sequence of CagL. Receptor binding of such cyclopeptides is regarded to be entropically favored, if the receptor-bound conformation is still accessible. However, neither the linear RHS-peptide 6 (ANFEANELFFISEDV) nor the RHS-cyclopeptides-1 to -5 showed a significant effect on WM-115 cell adhesion to immobilized CagL<sup>WT</sup>. In contrast, RGD-dependent WM-115 cell adhesion could be efficiently influenced by the RGD-cyclopeptide-7. Mutations within the RGD sequence in extracellular matrix proteins such as fibronectin are usually accompanied by loss of integrin affinity (Giancotti and Ruoslahti, <xref ref-type="bibr" rid="B18">1999</xref>; Takahashi et al., <xref ref-type="bibr" rid="B41">2007</xref>; Leiss et al., <xref ref-type="bibr" rid="B26">2008</xref>). This seems not to be fully applicable to CagL, as integrin-expressing WM-115 cells still adhere to the mutated proteins CagL<sup>RAD</sup> and CagL<sup>RGA</sup> but with reduced affinity (Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>). Interestingly, both the linear RHS-peptide ANFEANELFFISEDV and the RHS-cyclopeptide-2 were able to interfere with WM-115 cell adhesion to immobilized CagL<sup>RGA</sup> and CagL<sup>RAD</sup> proteins with IC<sub>50</sub> values in the micromolar range, indicating significant binding. The studies with the CagL<sup>RGA</sup> and CagL<sup>RAD</sup> mutants allowed us to distinguish RGD-dependent interaction from other types of binding. Not all RHS-cyclopeptides displayed such inhibitory biological activity, which clearly proves the influence of peptide conformation and three-dimensional structure on the anti-adhesive properties. We thus conclude that the WM-115 cell adhesion to recombinant CagL is mainly driven by the RGD recognition sequence, but is significantly assisted by the RHS sequence as a proposed auxiliary motif. There is an interesting analogy to fibronectin. Besides the RGD motif, fibronectin harbors another sequence required for maximum binding affinity to integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, called the synergy region, located in the ninth type III module adjacent to the RGD site (Nagai et al., <xref ref-type="bibr" rid="B31">1991</xref>; Aota et al., <xref ref-type="bibr" rid="B2">1994</xref>; Bowditch et al., <xref ref-type="bibr" rid="B11">1994</xref>; Chada et al., <xref ref-type="bibr" rid="B12">2006</xref>). Subsequent studies showed that the synergy region is not directly in contact with the integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> bound to fibronectin, and proposed an indirect function of the synergy region for the high affinity binding by optimally exposing the flexible RGD motif or by inducing long range electrostatic steering (Baron et al., <xref ref-type="bibr" rid="B9">1992</xref>; Takagi et al., <xref ref-type="bibr" rid="B40">2003</xref>). In the case of CagL, however, a FEANE-containing peptide alone can bind integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> as shown in peptide arrays, and the synergy region of fibronectin shares no sequence homology to CagL or the RHS domain.</p>
<p>The role of the RHS motif and neighboring amino acids was further investigated on the protein level with recombinant CagL proteins carrying corresponding point mutants. The secondary structure and temperature stability of all generated point mutants corresponds with that observed for CagL<sup>WT</sup> according to CD spectra. Given the above assumptions, pre-incubation of the WM-115 cells with the RGD-cyclopeptide-7 should provide information on the contribution of the RHS sequence to CagL binding phenomena. Strikingly, there is an effect of mutations in the RHS motif of CagL on WM-115 cell adhesion. RGD-cyclopeptide-7 was able to inhibit cell adhesion to CagL with mutations in the RHS sequence (CagL<sup>F86A</sup>, CagL<sup>E87A</sup>, CagL<sup>E90A</sup>) even at lower concentrations than for CagL<sup>WT</sup>. Granted that cell adhesion is governed by both RGD and RHS sequences, a mutation in the CagL RGD sequence (CagL<sup>RGA</sup>, CagL<sup>RAD</sup>) would lead to reduced cell adhesion and, hence, require a smaller concentration (reduced IC<sub>50</sub>) of the RGD-peptide that competes for binding (Table <xref ref-type="table" rid="T4">4</xref>; Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>). Conversely, WM-115 cell adhesion to immobilized CagL with mutations in the RHS motif conferring decreased affinity could be inhibited by the RGD-peptide at a smaller concentration (reduced IC<sub>50</sub>). This was indeed observed for CagL<sup>E87A</sup> and CagL<sup>E90A</sup>. In conclusion, the point mutant CagL<sup>F86A</sup> and a control mutant CagL<sup>Q40A</sup> show no significant affinity loss in their binding to WM-115 cells as compared to CagL<sup>WT</sup>, while the point mutants CagL<sup>E87A</sup> and CagL<sup>E90A</sup> display remarkably reduced affinity to WM-115 cells. The replacement of the negatively charged glutamates E87 and E90 by the hydrophobic amino acid alanine resulted in a decreased affinity toward WM-115 cells. In contrast, the exchange of the uncharged amino acids phenylalanine F86 and glutamine Q40 by alanine did not have any consequence in the same assays. These data imply that especially glutamate E87 is important for the interaction with integrin on the surface of host cells.</p>
<p>At first sight, the peptide array experiments in which we investigated the binding of immobilized CagL 15-mer peptides with the different purified integrins seem to implicate a stronger signal of a RHS containing peptide for bound integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub>, but much weaker signals compared to RGD containing peptides on the same membrane. Regarding the conformation of RGD containing peptides, cyclic RGD peptides with a &#x003B2;-turn around Asp-<sc>d</sc>-Leu-Ala-Arg display a much higher affinity to some integrins than do linear RGD peptides. The linear RGD containing peptides do not prefer this structural &#x003B2;-turn conformation, which could explain the fact that linear RGD peptides on the peptide array display very little affinity to integrins as compared to their cyclopeptide counterparts. While the arraypeptides-7 to -9 contain the whole FEANE amino acids of the RHS motif, only arraypeptide-9 reveals integrin &#x003B2;<sub>1</sub> interaction (Figure <xref ref-type="fig" rid="F5">5</xref>). In arraypeptide-10 and -11 the 15-mer peptide sequence is shifted C-terminally for three amino acids. Arraypeptide-10 therefore is lacking the phenylalanine of the RHS motif and displays a different interaction with integrin subunit &#x003B2;<sub>3</sub>, while the arraypeptide-11 includes only the final glutamate of the RHS motif and displays weak interaction with the integrin &#x003B2;<sub>5</sub> subunit. In cell binding studies with the 15-mer peptide of arraypeptide-9 corresponding to linear peptide 6, a binding inhibition of WM-115 cells to immobilized CagL<sup>RAD</sup> and CagL<sup>RGA</sup> could be shown (Tables <xref ref-type="table" rid="T2">2</xref> and <xref ref-type="table" rid="T3">3</xref>). Overall the binding potency of this linear peptide was surprisingly better than that observed for the cyclic RHS peptides. These results emphasize the possible involvement of adjacent amino acids next to the FEANE sequence for integrin interactions that probably are located in the C-terminal flanking site. The presented results allow no complete elucidation of amino acids important for integrin interaction, but combining the results of cell binding studies and the peptide array, the CagL F86 amino acid is not involved in the interaction with WM-115 cells (Table <xref ref-type="table" rid="T3">3</xref>) and the interaction with purified integrins (Figure <xref ref-type="fig" rid="F5">5</xref>), while both glutamates E87 and E90 have an impact and are probably exposed on the CagL surface. The observed binding of three different integrins to a relatively small CagL sequence region of about 18 amino acids on peptide arrays is a very interesting finding, and is relevant to recent reports which showed that CagL interacts not only with integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> on cells, but also &#x003B1;<sub>V</sub>&#x003B2;<sub>3</sub> and &#x003B1;<sub>V</sub>&#x003B2;<sub>5</sub> (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>; Conradi et al., <xref ref-type="bibr" rid="B13">2011</xref>; Wiedemann et al., <xref ref-type="bibr" rid="B48">2012</xref>).</p>
<p>Finally, it was investigated if the newly discovered RHS motif in CagL might also play a role during infections with <italic>H. pylori</italic>. As discussed above, an explicit amino acid region for the so-called RHS motif could not be clearly defined. Therefore two double point mutants CagL<sup>A84E/E87A</sup> and CagL<sup>A88E/L91A</sup> were chosen, with one mutation in the RHS region and another located at the N- or C-terminus, respectively. Based on infection experiments, we could show that <italic>H. pylori</italic> P12 WT, deletion mutant P12&#x00394;<italic>cagL</italic>, and P12&#x00394;<italic>cagL</italic> re-expressing CagL<sup>WT</sup> or CagL point mutants (A84E/E87A and A88E/L91A) bound equally well to cultured AGS cells. This suggests that CagL is not involved in general host cell binding during infection, in agreement with previous reports showing the overall importance of the major canonical adhesins BabA/B, SabA, AlpA/B, or OipA (for review, see Tegtmeyer et al., <xref ref-type="bibr" rid="B43">2011a</xref>). However, this illustrates clearly that the observed signaling defects discussed below are not due to a more general deficiency of the bacteria to adhere to AGS cells. First, <italic>H. pylori</italic> expressing the generated CagL point mutants exhibited significant defects in injection and phosphorylation of CagA between 2 and 4&#x02009;h of infection. Second, each of the CagL mutants in <italic>H. pylori</italic> had significantly pronounced defects in activating the MAP kinases ERK1/2 and serine phosphorylation of cortactin as well as the induction of the AGS cell elongation phenotype during infection. This suggests that mutation of the RHS motif in <italic>H. pylori</italic> results in various defects in the interaction of CagL with integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> with resulting inhibitory consequences for (i) the injection of CagA and (ii) for the downstream signaling to ERK1/2 and cortactin triggering cell elongation, especially at early times of infection.</p>
<p>Taken together, our presented data provide evidence for a novel domain in CagL playing a significant role in binding to integrin &#x003B1;<sub>5</sub>&#x003B2;<sub>1</sub> <italic>in vitro</italic> and for initiating signaling pathways through certain motifs encoded in the so-called RHS motif comprising the FEANE sequence and its flanking amino acids. We propose that the RGD motif is important for the CagL binding to integrins, while subsequent binding of other integrin-specific CagL motifs may assist in certain intracellular signaling events. Although we could demonstrate that the RHS motif and its adjacent amino acids are relevant in CagL&#x02013;integrin interactions and have an impact on the resulting signaling, more studies are necessary to further define the specific amino acids relevant for integrin interaction and downstream signaling. In addition, it has been shown that besides CagL, multiple other <italic>H. pylori</italic> factors are also involved in integrin &#x003B2;<sub>1</sub> binding, including CagA, CagI, CagY, and possibly CagH (Kwok et al., <xref ref-type="bibr" rid="B25">2007</xref>; Jim&#x000E9;nez-Soto et al., <xref ref-type="bibr" rid="B23">2009</xref>; Shaffer et al., <xref ref-type="bibr" rid="B38">2011</xref>). Their individual role for integrin-targeting/binding is not yet fully clear. Future studies should investigate whether these proteins act together or at different stages of the infection process.</p>
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<sec>
<title>Conflict of Interest Statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
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<ack>
<p>The work of Steffen Backert was supported through Priority Program SPP1150 of the Deutsche Forschungsgemeinschaft DFG (Ba1671/3) and another DFG grant (Ba1671/8-1). Timothy L. Cover was supported by the National Institutes of Health (R01 AI068009 and P01 CA116087) and the Department of Veterans Affairs. We thank Sabine Brandt (University Magdeburg) for support in the peptide array hybridizations, and Carrie Shaffer (Vanderbilt University Nashville) for help with the CagL complementation plasmid.</p>
</ack>
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