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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Cell Dev. Biol.</journal-id>
<journal-title>Frontiers in Cell and Developmental Biology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Cell Dev. Biol.</abbrev-journal-title>
<issn pub-type="epub">2296-634X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">896324</article-id>
<article-id pub-id-type="doi">10.3389/fcell.2022.896324</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Cell and Developmental Biology</subject>
<subj-group>
<subject>Editorial</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Editorial: Waken the Silent Majority: Principles and Pathogenic Significance of Non-Acetyl Acylation and Other Understudied Post-Translational Modifications</article-title>
<alt-title alt-title-type="left-running-head">Zhang</alt-title>
<alt-title alt-title-type="right-running-head">Editorial: Arginylation Editorial</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Zhang</surname>
<given-names>Fangliang</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/240310/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Molecular and Cellular Pharmacology</institution>, <institution>University of Miami Miller School of Medicine</institution>, <addr-line>Miami</addr-line>, <addr-line>FL</addr-line>, <country>United States</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Sylvester Comprehensive Cancer Center</institution>, <institution>University of Miami Health System</institution>, <addr-line>Miami</addr-line>, <addr-line>FL</addr-line>, <country>United States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited and reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/77782/overview">Cecilia Giulivi</ext-link>, University of California, Davis, United States</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Fangliang Zhang, <email>fzhang2@miami.edu</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Cellular Biochemistry, a section of the journal Frontiers in Cell and Developmental Biology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>13</day>
<month>04</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>10</volume>
<elocation-id>896324</elocation-id>
<history>
<date date-type="received">
<day>14</day>
<month>03</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>22</day>
<month>03</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Zhang.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Zhang</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<related-article id="RA1" journal-id="Front. Chem." related-article-type="commentary-article" xlink:href="https://www.frontiersin.org/researchtopic/14608" ext-link-type="uri">Editorial on the Research Topic <article-title>Waken the Silent Majority: Principles and Pathogenic Significance of Non-Acetyl Acylation and Other Understudied Post-Translational Modifications</article-title>
</related-article>
<kwd-group>
<kwd>posttranslational modification</kwd>
<kwd>arginylation</kwd>
<kwd>arginyltransferase</kwd>
<kwd>Ate1</kwd>
<kwd>terminal modification</kwd>
<kwd>evolution</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<p>Arginylation, the ribosome-independent transfer of arginine to protein/peptide, was discovered nearly six decades ago (<xref ref-type="bibr" rid="B6">Kaji et al., 1963</xref>; <xref ref-type="bibr" rid="B7">Kaji, 1968</xref>). Despite the long history, this posttranslational modification (PTM) remains underexplored. This is hindered by the fact that the study of arginylation is currently only conducted by a few dozen of research groups with a limited number of relevant publications each year.</p>
<p>In a certain sense, the lack of understanding of arginylation even leads to a false impression that this phenomenon may be unimportant. However, arginylation is an exceptionally widespread process that has been found in all eukaryotes examined (<xref ref-type="bibr" rid="B4">Graciet et al., 2006</xref>; <xref ref-type="bibr" rid="B5">Graciet et al., 2009</xref>; <xref ref-type="bibr" rid="B10">Licausi et al., 2011</xref>; <xref ref-type="bibr" rid="B12">Van and Smith, 2020</xref>). Such a conservation would be unimaginable if this PTM did does not play some important physiological role.</p>
<p>In this Research Topic &#x201c;<italic>Waken the Silent Majority: Principles and Pathogenic Significance of Non-Acetyl Acylation and other Understudied Post-Translational Modifications</italic>,&#x201d; several papers directly relevant to the intriguing phenomenon of arginylation are included to showcase the diverse functions of this PTM and the evolutionary root of arginyltransferase1 (ATE1) (<xref ref-type="bibr" rid="B1">Balzi et al., 1990</xref>), the main enzyme catalyzing arginylation in most eukaryotes (<xref ref-type="bibr" rid="B8">Kato and Nozawa, 1984</xref>).</p>
<p>In the review paper &#x201c;Post-translational Modifications of the Protein Termini&#x201d; by <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fcell.2021.719590/full">Chen and Kashina</ext-link>, a concise and balanced summary of many different types of PTMs on both the N- and C-termini of proteins are presented for their biochemical mechanisms and potential physiological roles. These include arginylation, which is mostly an N-terminal modification. In the original research paper &#x201c;Arginylation regulates G-protein signaling present in the retina&#x201d; by <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fcell.2021.807345/full">Fina et al.</ext-link>, the researchers found that several components in the G-protein signaling complexes in retina are subjected to arginylation, which may in turn affect the retinal function. In another research paper &#x201c;Protein Posttranslational Signatures Identified in COVID-19 Patient Plasma&#x201d; by <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fcell.2022.807149/full">Vedula et al.</ext-link>, researchers used comprehensive proteomic approaches and identified significant alterations of arginylation (and several other PTM) signatures in the plasma of COVID-19 patients. While the exact physiological meaning of these changes still awaits further clarification, this finding nevertheless highlights the potential involvement of arginylation in virus-induced pathological conditions. Finally, new clues for interpreting the role of the arginylation enzyme ATE1 was provided in the original research &#x201c;Regulation of Mitochondrial Respiratory Chain Complex Levels, Organization, and Function by Arginyltransferase 1&#x201d; by <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fcell.2020.603688/full">Jiang et al.</ext-link> (contributed by my own research group). In this study, a small fraction of ATE1 was found located inside mitochondria and is essential for the proper function of mitochondria in respiration. Intriguingly, homologues of eukaryotic ATE1 can be traced back to alpha-proteobacteria, relatives of the ancient ancestor of mitochondria. This connection between ATE1 and mitochondria may constitute a new angle for understanding the diverse functions of ATE1 in cellular metabolism (<xref ref-type="bibr" rid="B2">Brower and Varshavsky, 2009</xref>; <xref ref-type="bibr" rid="B14">Zhang et al., 2015</xref>), stress response (<xref ref-type="bibr" rid="B13">Wiley et al., 2020</xref>; <xref ref-type="bibr" rid="B9">Kumar et al., 2016</xref>; <xref ref-type="bibr" rid="B3">Deka et al., 2016</xref>), and oxygen sensing (<xref ref-type="bibr" rid="B11">Moorthy et al., 2022</xref>).</p>
<p>Overall, while arginylation is still a poorly understood process, the papers presented in this Research Topic will help to shorten the gap. Hopefully with more research and further advancements of techniques including proteomic study tools, a more comprehensive picture of arginylation will soon be on the horizon.</p>
</body>
<back>
<sec id="s1">
<title>Author Contributions</title>
<p>FZ wrote this manuscript.</p>
</sec>
<sec sec-type="COI-statement" id="s2">
<title>Conflict of Interest</title>
<p>The author declares that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s3">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Balzi</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Choder</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>W. N.</given-names>
</name>
<name>
<surname>Varshavsky</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Goffeau</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>1990</year>). <article-title>Cloning and Functional Analysis of the Arginyl-tRNA-Protein Transferase Gene ATE1 of <italic>Saccharomyces cerevisiae</italic>
</article-title>. <source>J. Biol. Chem.</source> <volume>265</volume>, <fpage>7464</fpage>&#x2013;<lpage>7471</lpage>. <pub-id pub-id-type="doi">10.1016/s0021-9258(19)39136-7</pub-id> </citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Brower</surname>
<given-names>C. S.</given-names>
</name>
<name>
<surname>Varshavsky</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Ablation of Arginylation in the Mouse N-End Rule Pathway: Loss of Fat, Higher Metabolic Rate, Damaged Spermatogenesis, and Neurological Perturbations</article-title>. <source>PLoS One</source> <volume>4</volume>, <fpage>e7757</fpage>. <pub-id pub-id-type="doi">10.1371/journal.pone.0007757</pub-id> </citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Deka</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Singh</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Chakraborty</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Mukhopadhyay</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Saha</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Protein Arginylation Regulates Cellular Stress Response by Stabilizing HSP70 and HSP40 Transcripts</article-title>. <source>Cel Death Discov.</source> <volume>2</volume>, <fpage>16074</fpage>. <pub-id pub-id-type="doi">10.1038/cddiscovery.2016.74</pub-id> </citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Graciet</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Hu</surname>
<given-names>R.-G.</given-names>
</name>
<name>
<surname>Piatkov</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Rhee</surname>
<given-names>J. H.</given-names>
</name>
<name>
<surname>Schwarz</surname>
<given-names>E. M.</given-names>
</name>
<name>
<surname>Varshavsky</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>2006</year>). <article-title>Aminoacyl-transferases and the N-End Rule Pathway of Prokaryotic/eukaryotic Specificity in a Human Pathogen</article-title>. <source>Proc. Natl. Acad. Sci. U.S.A.</source> <volume>103</volume>, <fpage>3078</fpage>&#x2013;<lpage>3083</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.0511224103</pub-id> </citation>
</ref>
<ref id="B5">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Graciet</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Walter</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Maoil&#xe9;idigh</surname>
<given-names>D. &#xd3;.</given-names>
</name>
<name>
<surname>Pollmann</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Meyerowitz</surname>
<given-names>E. M.</given-names>
</name>
<name>
<surname>Varshavsky</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2009</year>). <article-title>The N-End Rule Pathway Controls Multiple Functions during Arabidopsis Shoot and Leaf Development</article-title>. <source>Proc. Natl. Acad. Sci. U.S.A.</source> <volume>106</volume>, <fpage>13618</fpage>&#x2013;<lpage>13623</lpage>. <pub-id pub-id-type="doi">10.1073/pnas.0906404106</pub-id> </citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kaji</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Novelli</surname>
<given-names>G. D.</given-names>
</name>
<name>
<surname>Kaji</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>1963</year>). <article-title>A Soluble Amino Acid-Incorporating System from Rat Liver</article-title>. <source>Biochim. Biophys. Acta (Bba) - Specialized Section Nucleic Acids Relat. Subjects</source> <volume>76</volume>, <fpage>474</fpage>&#x2013;<lpage>477</lpage>. <pub-id pub-id-type="doi">10.1016/0926-6550(63)90070-7</pub-id> </citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kaji</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>1968</year>). <article-title>Soluble Amino Acid Incorporating System from Rat Liver</article-title>. <source>Biochemistry</source> <volume>7</volume>, <fpage>3844</fpage>&#x2013;<lpage>3850</lpage>. <pub-id pub-id-type="doi">10.1021/bi00851a009</pub-id> </citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kato</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Nozawa</surname>
<given-names>Y.</given-names>
</name>
</person-group> (<year>1984</year>). <article-title>Complete Purification of arginyl-tRNA: Protein Arginyltransferase from Hog Kidney and Production of its Antibody</article-title>. <source>Anal. Biochem.</source> <volume>143</volume>, <fpage>361</fpage>&#x2013;<lpage>367</lpage>. <pub-id pub-id-type="doi">10.1016/0003-2697(84)90675-4</pub-id> </citation>
</ref>
<ref id="B9">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kumar</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Birnbaum</surname>
<given-names>M. D.</given-names>
</name>
<name>
<surname>Patel</surname>
<given-names>D. M.</given-names>
</name>
<name>
<surname>Morgan</surname>
<given-names>W. M.</given-names>
</name>
<name>
<surname>Singh</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Barrientos</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Posttranslational Arginylation Enzyme Ate1 Affects DNA Mutagenesis by Regulating Stress Response</article-title>. <source>Cell Death Dis</source> <volume>7</volume>, <fpage>e2378</fpage>. <pub-id pub-id-type="doi">10.1038/cddis.2016.284</pub-id> </citation>
</ref>
<ref id="B10">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Licausi</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Kosmacz</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Weits</surname>
<given-names>D. A.</given-names>
</name>
<name>
<surname>Giuntoli</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Giorgi</surname>
<given-names>F. M.</given-names>
</name>
<name>
<surname>Voesenek</surname>
<given-names>L. A. C. J.</given-names>
</name>
<etal/>
</person-group> (<year>2011</year>). <article-title>Oxygen Sensing in Plants Is Mediated by an N-End Rule Pathway for Protein Destabilization</article-title>. <source>Nature</source> <volume>479</volume>, <fpage>419</fpage>&#x2013;<lpage>422</lpage>. <pub-id pub-id-type="doi">10.1038/nature10536</pub-id> </citation>
</ref>
<ref id="B11">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Moorthy</surname>
<given-names>B. T.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Patel</surname>
<given-names>D. M.</given-names>
</name>
<name>
<surname>Ban</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>O&#x27;Shea</surname>
<given-names>C. R.</given-names>
</name>
<name>
<surname>Kumar</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>The Evolutionarily Conserved Arginyltransferase 1 Mediates a pVHL-independent Oxygen-Sensing Pathway in Mammalian Cells</article-title>. <source>Dev. Cel</source>. <pub-id pub-id-type="doi">10.1016/j.devcel.2022.02.010</pub-id> </citation>
</ref>
<ref id="B12">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Van</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Smith</surname>
<given-names>A. T.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>ATE1-Mediated Post-Translational Arginylation Is an Essential Regulator of Eukaryotic Cellular Homeostasis</article-title>. <source>ACS Chem. Biol.</source> <volume>15</volume>, <fpage>3073</fpage>&#x2013;<lpage>3085</lpage>. <pub-id pub-id-type="doi">10.1021/acschembio.0c00677</pub-id> </citation>
</ref>
<ref id="B13">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wiley</surname>
<given-names>D. J.</given-names>
</name>
<name>
<surname>D&#x2019;Urso</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>F.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions with Specific Cellular Pathways <italic>In Vivo</italic>
</article-title>. <source>Front. Physiol.</source> <volume>11</volume>, <fpage>427</fpage>. <pub-id pub-id-type="doi">10.3389/fphys.2020.00427</pub-id> </citation>
</ref>
<ref id="B14">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Patel</surname>
<given-names>D. M.</given-names>
</name>
<name>
<surname>Colavita</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Rodionova</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>Buckley</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Scott</surname>
<given-names>D. A.</given-names>
</name>
<etal/>
</person-group> (<year>2015</year>). <article-title>Arginylation Regulates Purine Nucleotide Biosynthesis by Enhancing the Activity of Phosphoribosyl Pyrophosphate Synthase</article-title>. <source>Nat. Commun.</source> <volume>6</volume>, <fpage>7517</fpage>. <pub-id pub-id-type="doi">10.1038/ncomms8517</pub-id> </citation>
</ref>
</ref-list>
</back>
</article>