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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Cell Dev. Biol.</journal-id>
<journal-title>Frontiers in Cell and Developmental Biology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Cell Dev. Biol.</abbrev-journal-title>
<issn pub-type="epub">2296-634X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">778011</article-id>
<article-id pub-id-type="doi">10.3389/fcell.2021.778011</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Cell and Developmental Biology</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Mitophagy in Diabetic Kidney Disease</article-title>
<alt-title alt-title-type="left-running-head">Zhang et&#x20;al.</alt-title>
<alt-title alt-title-type="right-running-head">Mitophagy</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Zhang</surname>
<given-names>Xiaofeng</given-names>
</name>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1480543/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Feng</surname>
<given-names>Jing</given-names>
</name>
<xref ref-type="fn" rid="fn1">
<sup>&#x2020;</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Li</surname>
<given-names>Xia</given-names>
</name>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wu</surname>
<given-names>Dan</given-names>
</name>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wang</surname>
<given-names>Qian</given-names>
</name>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Li</surname>
<given-names>Shuyu</given-names>
</name>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Shi</surname>
<given-names>Changhua</given-names>
</name>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
</contrib>
</contrib-group>
<aff>School of Basic Medical Sciences, Beijing University of Chinese Medicine, <addr-line>Beijing</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/142291/overview">Gong-Ping Liu</ext-link>, Huazhong University of Science and Technology, China</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/52428/overview">Jun Ren</ext-link>, University of Washington, United&#x20;States</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1500980/overview">Ivana Novak</ext-link>, School of Medicine, Croatia</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Shuyu Li, <email>lishuyu0716@163.com</email>; Changhua Shi, <email>shichanghua520@sina.com</email>
</corresp>
<fn fn-type="equal" id="fn1">
<label>
<sup>&#x2020;</sup>
</label>
<p>These authors have contributed equally to this&#x20;work</p>
</fn>
<fn fn-type="other">
<p>This article was submitted to Molecular and Cellular Pathology, a section of the journal Frontiers in Cell and Developmental Biology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>10</day>
<month>12</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>9</volume>
<elocation-id>778011</elocation-id>
<history>
<date date-type="received">
<day>16</day>
<month>09</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>10</day>
<month>11</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Zhang, Feng, Li, Wu, Wang, Li and Shi.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Zhang, Feng, Li, Wu, Wang, Li and Shi</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these&#x20;terms.</p>
</license>
</permissions>
<abstract>
<p>Diabetic kidney disease (DKD) is the most common cause of end-stage kidney disease worldwide and is the main microvascular complication of diabetes. The increasing prevalence of diabetes has increased the need for effective treatment of DKD and identification of new therapeutic targets for better clinical management. Mitophagy is a highly conserved process that selectively removes damaged or unnecessary mitochondria <italic>via</italic> the autophagic machinery. Given the important role of mitophagy in the increased risk of DKD, especially with the recent surge in COVID-19-associated diabetic complications, in this review, we provide compelling evidence for maintaining homeostasis in the glomeruli and tubules and its underlying mechanisms, and offer new insights into potential therapeutic approaches for treatment of&#x20;DKD.</p>
</abstract>
<kwd-group>
<kwd>diabetic kidney disease</kwd>
<kwd>mitophagy</kwd>
<kwd>PINK1</kwd>
<kwd>parkin</kwd>
<kwd>mechanisms</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Diabetic kidney disease (DKD), the main microvascular complication of diabetes, is most often the consequence of chronic kidney disease and end-stage renal disease. Clinically, the main characteristics of DKD are albuminuria and decline in glomerular filtration rate (<xref ref-type="bibr" rid="B111">Tuttle et&#x20;al., 2014</xref>). Metabolic and hemodynamic changes in diabetes lead to alterations in the glomerular structure, such as progressive thickening of the glomerular basement membrane (GBM), expansion of the extracellular matrix (ECM), loss of Sertoli cells, and typical glomerular sclerosis (<xref ref-type="bibr" rid="B48">Kanwar et&#x20;al., 2011</xref>). Although pathogenic mechanisms of DKD remain unclear, several factors are considered to be involved in the pathogenesis of diabetic nephropathy including the generation of advanced glycation end products (<xref ref-type="bibr" rid="B99">Saxena et&#x20;al., 2019</xref>), reactive oxygen species (ROS) (<xref ref-type="bibr" rid="B66">Lindblom et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B34">Han et&#x20;al., 2018</xref>), endoplasmic reticulum stress (<xref ref-type="bibr" rid="B19">Fan et&#x20;al., 2017</xref>; <xref ref-type="bibr" rid="B112">Umanath and Lewis, 2018</xref>), and inflammatory factors and activation of the renin-angiotensin system. An increasing number of studies have shown that impaired mitochondrial function, reduced mitochondrial DNA, accumulation of damaged mitochondria, production of ROS, decreased ATP content and cell viability, and reduced number of phagocytic mitochondria are associated with diabetic nephropathy, which lead to the destruction of glomeruli, renal tubules, blood vessels, and interstitium (<xref ref-type="bibr" rid="B15">Czajka et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B90">Palikaras et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B120">Wei et&#x20;al., 2019</xref>). This suggests that dysregulation of mitophagy may be involved in the pathogenesis of diabetic nephropathy. Here, we review the detailed molecular mechanisms of mitophagy and highlight the role of mitophagy in the pathogenesis and treatment of&#x20;DKD.</p>
<sec id="s1-1">
<title>Mitophagy</title>
<p>Autophagy (AP) is a conserved intracellular process in which damaged or redundant organelles are degraded by lysosomes (<xref ref-type="bibr" rid="B111">Tuttle et&#x20;al., 2014</xref>). Mitophagy is the selective removal of mitochondria by autophagy to maintain mitochondrial content of cells and to ensure quality control (<xref ref-type="bibr" rid="B23">Galluzzi et&#x20;al., 2017</xref>; <xref ref-type="bibr" rid="B29">Guan et&#x20;al., 2018</xref>). Our understanding of mitophagy has come a long way since the coining of this term in 2005 (<xref ref-type="bibr" rid="B59">Lemasters, 2005</xref>). We now know that mitophagy is mediated by two different signaling pathways&#x2014;the PINK1/Parkin pathway (<xref ref-type="bibr" rid="B88">Novak, 2012</xref>) and the mitophagy receptor pathway. The mitophagy receptor consists of three components, viz., 1) Outer mitochondrial membrane (OMM) proteins, such as Bcl-2/E1B-19K-interacting protein 3-like (BNIP3L/NIX) (<xref ref-type="bibr" rid="B87">Novak et&#x20;al., 2010</xref>), BCL-2/adenovirus E1B 19-kDa interacting protein 3 (BNIP3) (<xref ref-type="bibr" rid="B35">Hanna et&#x20;al., 2012</xref>), FUN14 domain containing 1 (FUNDC1) (<xref ref-type="bibr" rid="B69">Liu et&#x20;al., 2012</xref>), FK506 binding protein 8 (FKBP8) (<xref ref-type="bibr" rid="B4">Bhujabal et&#x20;al., 2017</xref>), and Bcl-2-like protein 13 (Bcl2-L-13) (<xref ref-type="bibr" rid="B89">Otsu et&#x20;al., 2015</xref>), autophagy/beclin 1 regulator 1 (AMBRA1) (<xref ref-type="bibr" rid="B109">Strappazzon et&#x20;al., 2015</xref>); 2) mitochondrial membrane lipids such as cardiolipin (<xref ref-type="bibr" rid="B14">Chu et&#x20;al., 2013</xref>); and 3) mitophagy receptors, such as prohibitin 2 (PHB2), which form an inner mitochondrial membrane (IMM) component (<xref ref-type="bibr" rid="B121">Wei et&#x20;al., 2017</xref>).</p>
</sec>
<sec id="s1-2">
<title>PINK1/Parkin Pathway</title>
<p>PTEN-induced kinase 1(PINK1) is a serine/threonine kinase (<xref ref-type="bibr" rid="B86">Nguyen et&#x20;al., 2016</xref>), a member of the RBR E3 ligase family, which is usually located in the cytoplasm. Activation of the PINK1/Parkin pathway is currently considered to be the first and most studied regulatory mechanism in mitophagy (<xref ref-type="bibr" rid="B106">Sekine and Youle, 2018</xref>).</p>
</sec>
<sec id="s1-3">
<title>PINK1 Degradation</title>
<p>In healthy mitochondria, full-length PINK1 (64&#xa0;kDa) is continuously directed to mitochondria based on the mitochondrial targeting sequence (MTS) in its N-terminus and is imported into the inner mitochondrial membrane by TOMM (translocase of the outer membrane) 40 and TIMM (translocase of the inner membrane) 23 complex (<xref ref-type="bibr" rid="B106">Sekine and Youle, 2018</xref>), and shortly after import PINK1 is cleaved by mitochondrial processing peptidase (MPP) and presenilins-associated rhomboid-like protein (PARL) (<xref ref-type="bibr" rid="B107">Spinazzi and De Strooper, 2016</xref>); MPP eliminates the MTS from the PINK1 structure and PARL cleaves PINK1 at the transmembrane structural domain (TMD) Ala103 to generate 52&#xa0;kDa PINK1 (<xref ref-type="bibr" rid="B16">Deas et&#x20;al., 2011</xref>; <xref ref-type="bibr" rid="B133">Yoo and Jung, 2018</xref>; <xref ref-type="bibr" rid="B104">Sekine, 2020</xref>). Cleaved PINK1 is transported to the cytoplasm and is degraded by proteasomes through the traditional N-terminal pathway (<xref ref-type="bibr" rid="B131">Yamano and Youle, 2013</xref>). In this process, E3 ubiquitin ligases, UBR1, UBR2, and UBR4, are responsible for the degradation of PINK1 (<xref ref-type="bibr" rid="B131">Yamano and Youle, 2013</xref>). It was recently reported that PINK1 could be degraded at the mitochondrial-endoplasmic reticulum (ER) interface through ubiquitin, endoplasmic reticulum, and proteasomal degradation (<xref ref-type="bibr" rid="B30">Guardia-Laguarta et&#x20;al., 2019</xref>). The first two steps involved the endoplasmic reticulum (ER)-associated degradation (ERAD) pathway, which involved the E3 ligases gp78 and HRD1, and Valosin-containing protein (VCP) (<xref ref-type="fig" rid="F1">Figure&#x20;1</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Degradation pathway of PINK1 in normal mitochondria. In normal mitochondria, PINK1 is imported into mitochondria utilizing the translocase complex of the outer membrane (TOM) and the translocase (TIM) of the inner membrane. In the inner mitochondrial membrane (IMM), &#x2460; is followed by proteolytic cleavage of full-length PINK1 by mitochondrial processing peptidase (MPP) processing and the intermembrane serine protease progerin-associated rhomboid protein (PARL), which cleaves full-length PINK1 into a 52&#xa0;kDa fragment that is subsequently degraded by proteasomes <italic>via</italic> the conventional N-terminal pathway. &#x2461; It is also thought to be degraded at the mitochondrial&#x2013;endoplasmic reticulum (ER) interface.</p>
</caption>
<graphic xlink:href="fcell-09-778011-g001.tif"/>
</fig>
</sec>
<sec id="s1-4">
<title>Parkin Activation and Mitophagy</title>
<p>Parkin is inherently inactive and needs to be activated by PINK1. Autophosphorylation of PINK1 is a key event for the mitochondrial translocation of Parkin and its subsequent phosphorylation and activation (<xref ref-type="bibr" rid="B148">Zhuang et&#x20;al., 2016</xref>). Misfolding or aggregation of mitochondrial proteins and excessive ROS levels in the mitochondrial matrix stimulate mitochondrial damage or depolarization. Thus, mitochondria fail to import PINK1 into IMM, which induces the accumulation and activation of PINK1 in the OMM (<xref ref-type="bibr" rid="B46">Jin et&#x20;al., 2010</xref>). A recent study showed that &#x394;&#x3a8;m deletion-dependent arrest of PINK1 import not only originated from Tim23 inactivation but was also closely associated with competition between TOM7, and OMA1 (<xref ref-type="bibr" rid="B105">Sekine et&#x20;al., 2019</xref>). Phosphorylated PINK1 activates (<xref ref-type="bibr" rid="B94">Rasool et&#x20;al., 2018</xref>) and phosphorylates ubiquitin on serine 65 (Ser65), resulting in the recruitment of Parkin from the cytoplasm to the damaged OMM and its partial activation (<xref ref-type="bibr" rid="B79">Matsuda et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B114">Vives-Bauza et&#x20;al., 2010</xref>). Parkin recognizes phospho-Ser 65-ubiquitin (PSER65-UB) and translocates it to OMM proteins or the ubiquitin substrate, which provides more phosphorylated substrates for PINK1, and further recruits more Parkin, creating a positive feedback loop (<xref ref-type="bibr" rid="B78">Matsuda, 2016</xref>). PSER65-UB promotes the phosphorylation of UBLS65 residues in Parkin, which fully activates Parkin, ubiquitin, and many OMM proteins. This ultimately leads to the ubiquitination of specific proteins in the OMM and results in the recruitment of selective autophagy-adaptor proteins (<xref ref-type="bibr" rid="B54">Lazarou et&#x20;al., 2015</xref>), such as nuclear dot protein 52&#xa0;kDa (NDP52), optineurin (OPTN), P62/SQSTM1, neighbor of BRCA1 gene 1 (NBR1), and Tax1-binding protein 1 (TAX1BP1). TAX1BP1 served as a springboard for ring finger protein34 (RNF34) and mitochondrial antiviral signaling protein (MAVS) that facilitated RNF34-mediated autophagic degradation of MAVS through K27-linked ubiquitination (<xref ref-type="bibr" rid="B128">Xu et&#x20;al., 2021</xref>). These proteins interact with microtubule-associated protein light chain 3 (LC3) to trigger the mitochondrial degradation process (<xref ref-type="bibr" rid="B37">Heo et&#x20;al., 2015</xref>). Studies have shown that nipsnap homolog 1 (NIPSNAP1) and NIPSNAP2 are primarily mitochondrial matrix proteins that effectively act as &#x201c;eat-me&#x201d; signals for Parkin -dependent mitophagy, and NIPSNAP1 and/or NIPSNAP2 accumulate on the mitochondrial surface after mitochondrial depolarization, recruiting autophagy receptors as well as human Atg8 (autophagy-related 8)-family proteins to promote mitophagy (<xref ref-type="bibr" rid="B1">Abudu et&#x20;al., 2019</xref>; <xref ref-type="bibr" rid="B91">Princely Abudu et&#x20;al., 2019</xref>).</p>
</sec>
<sec id="s1-5">
<title>Ubiquitin Substrate</title>
<p>The substrates for polyubiquitination by the active Parkin include the mitochondrial matrix protein methionine sulfoxide reductase B2 (MsrB2), mitochondrial Rho GTPase (Miro1) (<xref ref-type="bibr" rid="B98">Safiulina et&#x20;al., 2019</xref>), F-box and WD repeat domain-containing 7 (Fbw7) (<xref ref-type="bibr" rid="B134">Yoon et&#x20;al., 2017</xref>), phosphoglycerate dehydrogenase (PHGDH) (<xref ref-type="bibr" rid="B68">Liu et&#x20;al., 2020a</xref>), mitofusin (MFN) 1 and 2 (<xref ref-type="bibr" rid="B26">Gegg et&#x20;al., 2010</xref>), and voltage-dependent anion-selective channel protein 1 (VDAC1) (<xref ref-type="bibr" rid="B27">Geisler et&#x20;al., 2010</xref>). The ubiquitinated substrates are degraded by proteasomes during the induction of mitophagy.</p>
<p>Specifically, MsrB2 is a necessary Parkin substrate. When mitochondria are severely damaged or ruptured, MsrB2 is released. It reduces Parkin methionine oxidation of MetO, which activates oxidized Parkin, and leads to the ubiquitination of MsrB2 by Parkin (<xref ref-type="bibr" rid="B56">Lee et&#x20;al., 2019a</xref>). Additionally, some polyubiquitin substrates have multiple functions. Miro1 is considered a Ca <sup>2&#x2b;</sup> biosensor. Recently, it was found that Miro is not only located in the mitochondria but also in peroxisomes. Besides acting as a substrate for parkin-dependent degradation, Miro can also initiate the recruitment of Parkin (<xref ref-type="bibr" rid="B98">Safiulina et&#x20;al., 2019</xref>). Mitotic fusion proteins (MFN 1 and 2) are not only involved in the regulation of mitochondrial fission and fusion, but also in mitophagy (<xref ref-type="bibr" rid="B26">Gegg et&#x20;al., 2010</xref>). Recently, it was reported that the PINK1/Parkin pathway is involved in the regulation of mitophagy and apoptosis through the induction of two different types of ubiquitination of VDAC1, and that VDAC1 polyubiquitination was involved in the regulation of Parkin-mediated mitophagy (<xref ref-type="bibr" rid="B32">Ham et&#x20;al., 2020</xref>).</p>
<p>SQSTM1/P62 can also ubiquitinate mitochondrial proteins directly through the P62-KEAP1-RBX1 complex, which is independent of PINK1 and PRKN (<xref ref-type="bibr" rid="B130">Yamada et&#x20;al., 2019</xref>). Similarly, it has been found that PINK1 can directly recruit OPTN/NDP52 through the ubiquitin-binding domain, independent of Parkin, and then it recruits UNC-51-like autophagy-activated kinase 1 (ULK1) in mitochondria to initiate mitophagy (<xref ref-type="bibr" rid="B54">Lazarou et&#x20;al., 2015</xref>). In the absence of LC3, NDP52 associates with the ULK1 complex <italic>via</italic> focal adhesion kinase family-interacting protein of 200&#xa0;kDa (FIP200), facilitated by TANK-binding kinase 1 (TBK1), and subsequently recruits the ULK1 complex to ubiquitinated cargo to initiate mitophagy (<xref ref-type="bibr" rid="B113">Vargas et&#x20;al., 2019</xref>). This suggests that deficiency of the PINK1-dependent mitophagy factor can be adequately compensated through other means (<xref ref-type="fig" rid="F2">Figure&#x20;2</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>A brief illustration of PTEN-induced kinase 1 (PINK1) mediated mitophagy in damaged mitochondria. When cells are stimulated, the inner mitochondrial membrane undergoes sustained depolarization, which leads to a decrease in the mitochondrial transmembrane potential &#x394;&#x3a8;m. PINK1 accumulates on the outer mitochondrial membrane and phosphorylates ubiquitin and Parkin, which causes Parkin to be recruited from the cytoplasm to the mitochondria. Activated Parkin can phosphorylate and ubiquitinate mitochondrial proteins (e.g., MFN1/2, MsrB2, Miro1, and Fbw7), and autophagic adaptor proteins can directly recognize polyubiquitin chains (p62, NDP52, OPTN, TAX1BP1, and NBR1) on damaged mitochondria by binding to microtubule-associated protein light chain 3 (LC3). This can recruit ubiquitinated substances into autophagosomes, subsequently forming mitochondrial autophagosomes, fusion with lysosomes, and ultimately break down of damaged mitochondria.</p>
</caption>
<graphic xlink:href="fcell-09-778011-g002.tif"/>
</fig>
</sec>
<sec id="s1-6">
<title>Mitophagy Receptor Pathway</title>
<sec id="s1-6-1">
<title>BNIP3 and NIX</title>
<p>BNIP3 and its homologous protein, Nix/BNIP3L, are members of the &#x201c;BH3-only&#x201d; Bcl-2 subfamily (<xref ref-type="bibr" rid="B85">Ney, 2015</xref>). Both BNIP3 and NIX contain LC3-interacting region (LIR) motifs that can bind to LC3, inducing mitophagy (<xref ref-type="bibr" rid="B100">Schwarten et&#x20;al., 2009</xref>; <xref ref-type="bibr" rid="B35">Hanna et&#x20;al., 2012</xref>).</p>
<p>Previous studies have shown that BINP3 is involved in autophagic cell death in apoptosis-competent cells under hypoxia (<xref ref-type="bibr" rid="B3">Azad et&#x20;al., 2008</xref>). Phosphorylation of S17 and S24 in BNIP3 regulates the interaction between BNIP3 and LC3 during mitochondrial depolarization (<xref ref-type="bibr" rid="B147">Zhu et&#x20;al., 2013</xref>), suggesting that kinases or phosphatases may play a role in modulating mitophagy.</p>
<p>NIX-dependent mitochondrial removal was first identified in mature erythrocytes (<xref ref-type="bibr" rid="B101">Schweers et&#x20;al., 2007</xref>), and previous research demonstrated that phosphorylation of Ser34 and Ser35 in Nix enhances its interaction with LC3 and increases the recruitment of autophagic machinery to mitochondria (<xref ref-type="bibr" rid="B96">Rogov et&#x20;al., 2017</xref>). Recent evidence suggests that LIR phosphorylation and NIX dimerization are novel molecular mechanisms for the activation of NIX, wherein Ser212, the major amino acid residue in the C-terminus, is responsible for the dimerization of NIX (<xref ref-type="bibr" rid="B77">Marinkovic et&#x20;al., 2020</xref>). These structural studies provide important information for exploring drugs that target&#x20;NIX.</p>
</sec>
<sec id="s1-6-2">
<title>FUNDC1</title>
<p>FUNDC1 is a new OMM protein that promotes mitochondrial fragmentation and mitophagy during hypoxia (<xref ref-type="bibr" rid="B69">Liu et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B139">Zhang et&#x20;al., 2016a</xref>; <xref ref-type="bibr" rid="B140">Zhang et&#x20;al., 2017</xref>). Recently, it was shown that FUNDC1 could recruit dynamin 1-like (DNM1L) to drive mitochondrial fission (<xref ref-type="bibr" rid="B125">Wu et&#x20;al., 2016</xref>). Dephosphorylation of Ser13 of FUNDC1 enhances its interaction with DNM1L, thus enhancing mitophagy (<xref ref-type="bibr" rid="B12">Chen et&#x20;al., 2016</xref>). In addition, in a model of ischemic acute kidney injury, the protective effect of Fundc1-dependent mitophagy could be exerted via the suppression of Drp1-mediated mitochondrial fission (<xref ref-type="bibr" rid="B117">Wang et&#x20;al., 2020a</xref>). FUNDC1-mediated mitophagy is greatly affected by the phosphorylation status of FUNDC1 (<xref ref-type="bibr" rid="B75">Lv et&#x20;al., 2017</xref>). Under normal conditions, CK2&#x20;kinase-induced Ser13 phosphorylation of the LIR motif and SRC kinase-induced Tyr18 phosphorylation of the LIR motif inhibit FUNDC1-mediated mitophagy, whereas Ser17 phosphorylation promotes mitophagy (<xref ref-type="bibr" rid="B52">Kuang et&#x20;al., 2016</xref>). Under loss of mitochondrial membrane potential or hypoxia, FUNDC1 undergoes dephosphorylation due to loss of SRC and CK2 kinase activity and activation of phosphatases including phosphoglycerate mutase 5 (PGAM5) and ULK1 (<xref ref-type="bibr" rid="B126">Wu et&#x20;al., 2014a</xref>; <xref ref-type="bibr" rid="B7">Chen et&#x20;al., 2014</xref>). Dephosphorylated FUNDC1 interacts with LC3 through its typical LC3 binding motif Y 18) XXL 21) to induce mitophagy. FUNDC1 was shown to be a substrate for mitochondrial ubiquitin ligase (MARCH5), an E3 ligase localized to the OMM. In addition, the MARCH5-FUNDC1 axis is capable of fine-tuning hypoxia-induced mitophagy by a mechanism that may be related to the regulation of FUNDC1 ubiquitination and degradation (<xref ref-type="bibr" rid="B13">Chen et&#x20;al., 2017a</xref>). B-cell lymphoma-2-like 1 (BCL2L1) inhibits PGAM5 activity (<xref ref-type="bibr" rid="B123">Wu et&#x20;al., 2014b</xref>), whereas syntaxin 17 (Stx17) promotes interaction between PGAM5 and FUNDC1. FUNDC1 can also bind to inositol 4-inositol-5-trisphosphate type 2 receptor (IP3R2) in the endoplasmic reticulum, activating calcium-dependent cAMP responsive element binding protein (CREB) to regulate fission protein 1 (Fis1) at the transcriptional level and promote mitophagy (<xref ref-type="bibr" rid="B124">Wu et&#x20;al., 2017</xref>).</p>
</sec>
</sec>
<sec id="s1-7">
<title>Regulatory Factors and Interaction of BINP3 and FUNDC1 Expression</title>
<p>The process of mitophagy induced by BINP3, FUNDC1, and Parkin may not occur independently. These factors not only promote their own recruitment through positive feedback loops but also promote the recruitment of other pro-mitophagy factors. BNIP3 and NIX can promote the recruitment of Parkin to mitochondria (<xref ref-type="bibr" rid="B18">Ding et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B57">Lee et&#x20;al., 2011</xref>). BNIP3 can suppress the proteolysis of PINK1 and facilitates the accumulation of full-length PINK1 on the OMM (<xref ref-type="bibr" rid="B138">Zhang et&#x20;al., 2016b</xref>). NIX can be used as an alternative mediator of mitophagy (<xref ref-type="bibr" rid="B51">Koentjoro et&#x20;al., 2017</xref>) restoring mitochondrial function under PINK1 or Parkin deficiency.</p>
<p>As of date, many factors have been identified as BNIP3 transcription factors; these include hypoxia-inducible factor-1 subunit &#x3b1; (HIF-1 &#x3b1;), MIR-145 (<xref ref-type="bibr" rid="B67">Liu et&#x20;al., 2019</xref>), p53 (<xref ref-type="bibr" rid="B21">Feng et&#x20;al., 2011</xref>), and Brain and muscle ARNT-like protein 1 (BMAL1) (<xref ref-type="bibr" rid="B60">Li et&#x20;al., 2020</xref>). Specifically, insulin-like growth factor I (IGF-1) signal transduction promotes tumorigenesis. IGF-1-induced BNIP3-dependent mitophagy is a stress-protective response in cancer cell lines and mouse embryonic fibroblasts (MEFs). This process also requires the nuclear factor erythroid-2 related factor 2 (Nrf2) to play a critical through HIF-1 &#x3b1; and nuclear factor erythroid 2-like 1 (NRF1) (<xref ref-type="bibr" rid="B95">Riis et&#x20;al., 2020</xref>). The BDNF/TrkB/HIF-1 &#x3b1;/BNIP3 signal transduction pathway can regulate the mitophagy in bone marrow endothelial cells (<xref ref-type="bibr" rid="B44">Jin et&#x20;al., 2019</xref>), which complements the upstream signaling of HIF-1 &#x3b1;/BNIP3. In cardiomyocytes, the circadian gene, <italic>BMAL1,</italic> was observed to bind to the E-box element in the BNIP3 promoter, thereby directly regulating BINP3 transcription (<xref ref-type="bibr" rid="B60">Li et&#x20;al., 2020</xref>).</p>
<p>Macrophage stimulating factor 1 (Mst1), a new type of mitophagy upstream regulator, is involved in the regulation of multiple mitophagy pathways. This was verified through a series of tests. In colorectal cancer, overexpression of Mst1 can activate the JNK/p53 pathway, increase p53 phosphorylation, and eventually inhibit BNIP3-related mitophagy (<xref ref-type="bibr" rid="B61">Li et&#x20;al., 2018a</xref>). In fatty liver disease, it was found that Mst1 gene knockout reverses Parkin-related mitotic phagocytosis, which regulates Parkin expression through the AMP-activated protein kinase (AMPK) pathway (<xref ref-type="bibr" rid="B145">Zhou et&#x20;al., 2019a</xref>). p53 is a mitotic regulator that can inhibit the transcription and expression of BNIP3 and FUNDC1. It was shown that BNIP3-mediated mitophagy is regulated by the NR4A1/DNA-PKcs/p53 axis in non-alcoholic fatty liver disease, resulting in mitophagy arrest (<xref ref-type="bibr" rid="B146">Zhu et&#x20;al., 2020</xref>). Further experiments showed that the Sirt3/ERK/CREB signal transduction axis is also involved in the regulation of BNIP3-mediated mitophagy. Thus, it inhibits mitochondrial-dependent apoptosis of hepatocytes (<xref ref-type="bibr" rid="B62">Li et&#x20;al., 2018b</xref>). Surprisingly, it was found that the NR4A1/DNA-PKcs/p53 transduction axis also activates Drp1-related mitochondrial fission and limits FUNDC1-related mitophagy in alcohol-related liver disease (ARLD). This axis is also related to the increase in the expression of CK2 by p53 (<xref ref-type="bibr" rid="B144">Zhou et&#x20;al., 2019b</xref>).</p>
<p>In mammals, the mitogen-activated protein kinase (MAPK) pathway consists of three parts&#x2014;the extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38 kinase pathway. Among these, there is evidence that the ERK and JNK pathways are involved in the regulation of FUNDC1-dependent mitophagy. In myocardial ischemia-reperfusion injury, Mst1 inactivates FUNDC1-related mitophagy by downregulating the MAPK/ERK/CREB pathway (<xref ref-type="bibr" rid="B136">Yu et&#x20;al., 2019</xref>). In laryngeal cancer cells, upregulation of FUNDC1 expression can be achieved by activating Erk1/2 signaling (<xref ref-type="bibr" rid="B40">Hui et&#x20;al., 2019</xref>), and JNK and ERK MAPK activation can also trigger BNIP3-induced mitophagy. This was also confirmed by UVB radiation-mediated accumulation of ROS in human primary epidermal keratinocytes (HPEK) (<xref ref-type="bibr" rid="B81">Moriyama et&#x20;al., 2017</xref>). In TNF-&#x3b1;&#x2013;induced mouse microglial BV-2 cells, the MAPK/ERK/Yap signal pathway was involved in MA-5-mediated upregulation of BNIP3 expression (<xref ref-type="bibr" rid="B58">Lei et&#x20;al., 2018</xref>).</p>
<p>Sirtuin 3 (SIRT3) is a mitochondrial deacetylase in neonatal mouse cardiomyocytes treated with high amounts of glucose. Overexpression of SIRT3 significantly increased the deacetylation of Forkhead box class O 3a (FoxO3a) as well as the expression of Parkin and autophagy marker (LC3B) (<xref ref-type="bibr" rid="B135">Yu et&#x20;al., 2017</xref>). The study found that when SIRT3 was blocked, the deacetylation of p53 was not maintained, increasing p53&#x2013;Parkin binding and blocking Parkin depolarized mitochondrial translocation (<xref ref-type="bibr" rid="B65">Li et&#x20;al., 2018c</xref>). In addition, Newcastle disease virus infection induces SIRT3 loss <italic>via</italic> PINK1-PRKN-dependent mitophagy to reprogram energy metabolism (<xref ref-type="bibr" rid="B28">Gong et&#x20;al., 2021</xref>). In CATH.a cells, mitochonic acid 5 (MA-5) increased the expression of SIRT3 through the AMPK pathway and promoted Parkin-related mitophagy (<xref ref-type="bibr" rid="B39">Huang et&#x20;al., 2019</xref>).</p>
<p>AMPK, a heterotrimeric complex, is an important cellular energy receptor and metabolic switch. There is evidence that the AMPK signaling pathway promotes nuclear translocation of the transcription factor EB (TFEB) and induces Parkin-related mitophagy (<xref ref-type="bibr" rid="B5">Cao et&#x20;al., 2020</xref>). In addition, AMPK can also promote phosphorylation of Parkin by activating S-phase kinase-associated protein 2 (Skp2) (<xref ref-type="bibr" rid="B36">He and Gu, 2018</xref>). In cardiomyocytes, overexpression of the AMPK&#x3b1; 2 subtype can phosphorylate Ser495 PINK1 to eliminate damaged mitochondria (<xref ref-type="bibr" rid="B115">Wang et&#x20;al., 2018a</xref>). AMPK mediates phosphorylation of TBK1 through the ULK1 complex, which enhances the binding ability of autophagy receptors (such as OPTN) to the ubiquitin cargo (<xref ref-type="bibr" rid="B102">Seabright et&#x20;al., 2020</xref>) (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref>).</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Related factors regulate FUNDC1, BINP3, and Parkin-mediated mitophagy. Among them, SIRT3 activates Parkin-associated mitophagy by mediating FOXO3a and p53 deacetylation. SIRT3 is involved in the regulation of BNIP3-mediated mitophagy through the ERK-CREB signal transduction axis. p53 is involved in the regulation of mitophagy. The NR4A1/DNA-PKcs/p53 pathway inhibits FUNDC1 and BINP3-mediated mitophagy.</p>
</caption>
<graphic xlink:href="fcell-09-778011-g003.tif"/>
</fig>
</sec>
<sec id="s1-8">
<title>FKBP8</title>
<p>FKBP8 belongs to the FK506 binding protein family and is a new type of mitochondrial receptor. It recruits LC3A to damaged mitochondria in an LIR-dependent manner to promote mitophagy, which is unrelated to the PINK1-Parkin-induced mitophagy pathway (<xref ref-type="bibr" rid="B4">Bhujabal et&#x20;al., 2017</xref>).</p>
</sec>
<sec id="s1-9">
<title>Bcl2-L-13</title>
<p>Bcl2-L-13 is an OMM protein. When expressed in yeast, it can be used as a mitochondrial receptor to compensate for the function of mitophagy receptor, Atg32 (<xref ref-type="bibr" rid="B76">Mao et&#x20;al., 2011</xref>). After mitochondrial depolarization, Bcl2-L-13 recruits the ULK1 complex, which is composed of ULK1, ATG13, FIP200, and ATG101. Thereafter, LC3B is recruited to the OMM. ULK1 induces mitophagy through interaction between the LIR motif in the Bcl2-L-13-ULK1 complex and LC3B (<xref ref-type="bibr" rid="B83">Murakawa et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B82">Murakawa et&#x20;al., 2019</xref>).</p>
</sec>
<sec id="s1-10">
<title>AMBRA1</title>
<p>In an ischemia/reoxygenation model, AMBRA1, the E3 ubiquitin ligase, HUWE1, and IKK&#x3b1; kinase together regulate mitophagy. AMBRA1 acts as a cofactor for HUWE1 activity, promotes interaction between HUWE1 and MFN2, leading to the ubiquitination and degradation of MFN2, which ultimately affects mitophagy. Moreover, IKK&#x3b1; can phosphorylate AMBRA1 on Ser1014, allowing the AMBRA1-LIR pattern to interact with LC3 (<xref ref-type="bibr" rid="B17">Di Rita et&#x20;al., 2018</xref>). AMBRA1 is also thought to enhance the PINK1/PARK2-dependent mitophagy (<xref ref-type="bibr" rid="B109">Strappazzon et&#x20;al., 2015</xref>). Myeloid cell leukemia-1 (MCL1), a member of the BCL2 family, is a negative regulator of AMBRA1-dependent mitophagy, which inhibits the recruitment of HUWE1 to the mitochondria. When MCL1 is phosphorylated by GSK-3&#x3b2; at a conserved GSK-3 phosphorylation site (S159), the stability of MCL1 is disrupted, which initiates AMBRA1-induced mitophagy and ultimately leads to the degradation of MCL1 (<xref ref-type="bibr" rid="B108">Strappazzon et&#x20;al., 2020</xref>).</p>
</sec>
<sec id="s1-11">
<title>PHB2</title>
<p>PHB2, a highly conserved membrane scaffolding protein, was identified as a novel inner membrane mitophagy receptor that mediates mitophagy (<xref ref-type="bibr" rid="B121">Wei et&#x20;al., 2017</xref>). Recent evidence suggests that PHB2 promotes PINK1-PRKN/Parkin-dependent mitophagy through the PARL-PGAM5-PINK1 axis. During mitochondrial depolarization or damage, PHB2 interacts with PARL to protect the structural integrity of PGAM5, thereby, retaining PINK1 on the OMM, which subsequently recruits Parkin to the damaged mitochondria, initiating mitophagy (<xref ref-type="bibr" rid="B53">Lahiri and Klionsky, 2017</xref>; <xref ref-type="bibr" rid="B132">Yan et&#x20;al., 2020</xref>). Bax inhibitor 1 (BI1) could stabilize PHB2 and promote its retention in mitochondria, thus, preserving mitochondrial homeostasis (<xref ref-type="bibr" rid="B116">Wang et&#x20;al., 2020b</xref>).</p>
</sec>
<sec id="s1-12">
<title>Cardiolipin</title>
<p>Cardiolipin is a diphosphatidylglyceride that is distributed in the IMM. Rotenone, 6-hydroxydopamine, and other pre-mitochondrial stimuli cause cardiolipin to be externalized to the mitochondrial surface. Cardiolipin directly interacts with microtubule-associated protein 1 light chain 3 (MAP1LC3) to induce mitophagy for clearing damaged mitochondria (<xref ref-type="bibr" rid="B14">Chu et&#x20;al., 2013</xref>). This suggests that cardiolipin can act as an important &#x201c;I eat&#x201d; signal to regulate mitochondrial cell death and survival (<xref ref-type="fig" rid="F4">Figure&#x20;4</xref>).</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Receptor-mediated mitochondrial phagocytosis. Mitochondrial membrane proteins (NIX, BNIP3, FUNDC1, AMBRA1, BCL2L13, PHB2, and FKBP8) and lipids (cardiolipin) interact with LC3 and then recruit autophagosomes to mitochondria to initiate mitophagy. Under hypoxic conditions, BNIP3 is phosphorylated at S17 and S24, and NIX is phosphorylated at Ser81, favoring interaction with LC3. Normally, FUNDC1 is phosphorylated at S13 and T18 by CK2 kinase and SRC kinase, respectively, to inhibit FUNDC1-mediated mitophagy, when mitochondria are stimulated, UNC-51-like autophagy-activated kinase 1 (ULK1) and E3 ubiquitin ligase March5, PGAM5 phosphatase dephosphorylate FUNDC1. BCL2L13 recruits ULK1 to form a Bcl2-L-13-ULK1 complex that binds to LC3 through its LIR motif. PHB2 in the inner mitochondrial membrane acts as a mitochondrial receptor and cooperates with PARL, PGAM5, PINK1, and Parkin to regulate mitophagy. AMBRA1 is phosphorylated at S1014 in response to two key factors, HUWE1 and IKK&#x3b1;, enhancing the interaction with LC3. FKBP8 binds to LC3 in an LIR-dependent manner. Cardiolipin translocates to the outer mitochondrial membrane and directly interacts with LC3 to promote mitophagy.</p>
</caption>
<graphic xlink:href="fcell-09-778011-g004.tif"/>
</fig>
</sec>
<sec id="s1-13">
<title>Mitophagy and Renal Cells in DKD</title>
<p>The mechanisms of mitophagy in kidney function and pathology remain largely understudied. We are only beginning to appreciate the complex cellular process of mitophagy. A growing body of evidence implicates the importance of mitophagy in the maintenance of kidney homeostasis and pathogenesis. Much of the current insight has been gained from investigations on renal cells in culture and from complementary studies on animal models. The regulation and function of mitophagy in the kidney are likely cell type- and context-specific. Below, we discuss studies on four resident renal cell types, viz., tubular epithelial cells, podocytes, glomerular mesangial cells, and endothelial cells (<xref ref-type="fig" rid="F5">Figure&#x20;5</xref>). These highly specialized cell types are targets for diabetic kidney injury.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Summary of renal cell autophagy-mediated pathways in diabetic kidney disease (DKD). Txnip, Thioredoxin-interacting protein; OPTN, Optineurin; PGRN, Progranulin; FBW7, F-box and WD repeat domain-containing protein 7; PI3K, The phosphoinositide 3- kinase; Akt, protein kinase B; Nrf-2, nuclear factor erythroid 2-related factor 2; mTOR, the mammalian target of rapamycin.</p>
</caption>
<graphic xlink:href="fcell-09-778011-g005.tif"/>
</fig>
</sec>
<sec id="s1-14">
<title>Renal Tubules and Mitophagy in DKD</title>
<p>In renal tubular epithelial cells (RTECs) from mice treated with high glucose (HG) and in renal biopsies from DKD patients, diminished levels of mitophagy were observed (<xref ref-type="bibr" rid="B10">Chen et&#x20;al., 2018</xref>). Additionally, there is evidence for diminished mitophagy in the renal tissue of diabetic mice, with decreased expression of mitochondrial PINK1, Parkin, LC3II (mito-LC3II), Beclin1, and Atg5 (<xref ref-type="bibr" rid="B20">Feng et&#x20;al., 2018</xref>). Findings in primary human renal epithelial cells <italic>in&#x20;vitro</italic> demonstrate that mitochondrial quality control can be perturbed by mitophagy mediated through PINK/Parkin (<xref ref-type="bibr" rid="B10">Chen et&#x20;al., 2018</xref>; <xref ref-type="bibr" rid="B9">Chen et&#x20;al., 2020</xref>; <xref ref-type="bibr" rid="B47">Kang et&#x20;al., 2020</xref>; <xref ref-type="bibr" rid="B141">Zhao and Sun, 2020</xref>). In diabetic nephropathy models, Parkin knockout leads to many injury features, such as apoptosis, inflammation, fibrosis, premature senescence of RTECs, and decreased renal function (<xref ref-type="bibr" rid="B9">Chen et&#x20;al., 2020</xref>). The mitochondrial division/mitophagy inhibitor, Mdivi-1, could accelerate senescence in RTECs (<xref ref-type="bibr" rid="B10">Chen et&#x20;al., 2018</xref>), whereas in HG-stimulated HK2 and LLC-PK1 cells, overexpression of MIOX, a tubule-specific enzyme, inhibits PINK1/Parkin-induced mitophagy, which leads to increased renal ROS generation and tubulointerstitial injury in diabetic mice (<xref ref-type="bibr" rid="B137">Zhan et&#x20;al., 2015</xref>). <italic>In vitro</italic> studies showed dysregulation of mitophagy in HG-induced proximal tubular cells, and TXNIP siRNA restored tubular mitophagy by inhibiting the mTOR signaling pathway and expression of BNIP3 (<xref ref-type="bibr" rid="B38">Huang et&#x20;al., 2016</xref>). A large body of evidence indicates that impaired mitophagy may play a fundamental role in the pathogenesis of&#x20;DKD.</p>
<p>Interestingly, overexpression of PINK1 in mouse RTECs failed to attenuate mitochondrial dysfunction and cellular senescence. In contrast, increased mitochondrial formation, decreased the accumulation of mitochondrial ROS (MtROS), and activation of mitophagy was observed with overexpression of OPTN, which ultimately alleviated premature tubular cell aging (<xref ref-type="bibr" rid="B10">Chen et&#x20;al., 2018</xref>). In addition, decreased OPTN expression leads to the development of tubulointerstitial inflammation and the mechanism may be related to the accumulation of damaged mitochondria and activation of the NLRP3 inflammasome, which in turn leads to the cleavage of caspase-1 and IL-1&#x3b2; and a significant increase in the release of IL-1&#x3b2; and IL-18 (<xref ref-type="bibr" rid="B11">Chen et&#x20;al., 2019</xref>). This suggests that OPTN may be the most important protein regulator of mitophagy in RTECs.</p>
</sec>
<sec id="s1-15">
<title>Podocytes and Mitophagy in DKD</title>
<p>The mitochondrial LC3II/LC3I ratio and levels of PINK1, Parkin, and Mfn1 proteins were downregulated, whereas p62 protein levels were upregulated in renal tubular epithelial cells of diabetic mice, podocytes of diabetic mice, and high glucose-treated MPC5 cells (<xref ref-type="bibr" rid="B137">Zhan et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B110">Sun et&#x20;al., 2019</xref>; <xref ref-type="bibr" rid="B31">Guo et&#x20;al., 2020</xref>; <xref ref-type="bibr" rid="B33">Han et&#x20;al., 2021</xref>). Additionally, glomerular basement membrane thickening and dilatation of podocytes were observed in the kidneys of diabetic mice, suggesting that mitophagy of podocytes is inhibited and affects the progression of diabetic nephropathy (<xref ref-type="bibr" rid="B63">Li et&#x20;al., 2017a</xref>; <xref ref-type="bibr" rid="B31">Guo et&#x20;al., 2020</xref>). Silencing of Parkin inhibited mitophagy and significantly increased apoptosis of podocytes and production of MtROS, induced with palmitic acid (<xref ref-type="bibr" rid="B43">Jiang et&#x20;al., 2020</xref>).</p>
<p>A recent report provided evidence that mitochondrial phagocytosis may be inhibited by the downregulation of the secreted glycoprotein, PGRN (<xref ref-type="bibr" rid="B143">Zhou et&#x20;al., 2019c</xref>). The expression of PGRN was significantly decreased in the kidneys of both DKD patients and diabetic mice. Reduced PGRN expression leads to the inhibition of the transcription factor, FoxO1, dependent on STAT1, resulting in the inhibition of the expression of the mitophagy-associated proteins, PINK1 and Parkin, which leads to mitochondrial dysfunction in the kidney under HG conditions (<xref ref-type="bibr" rid="B142">Zhou et&#x20;al., 2019d</xref>). In addition, FoxO1 can regulate the PINK1/Parkin-dependent mitophagy activity. Overexpression of FoxO1 could ameliorate apoptosis and injury in a cultured immortalized mouse podocyte cell line (CIMP) and in mouse glomerular mesopodia induced by streptozotocin (STZ) (<xref ref-type="bibr" rid="B142">Zhou et&#x20;al., 2019d</xref>). Knockdown of lncRNA SNHG17 promotes the formation of autophagic vacuoles and Parkin-mediated mitophagy by regulating the degradation of Mst1 (<xref ref-type="bibr" rid="B31">Guo et&#x20;al., 2020</xref>).</p>
<p>These studies have shown that in diabetic kidneys, factors, such as PGRN, FoxO1, and lncRNA SNHG17, are involved in PINK1/Parkin-induced mitophagy through different pathways. These weaken the protective function of mitophagy, which leads to diabetic kidney disease.</p>
</sec>
<sec id="s1-16">
<title>Mesangial Cell and Mitophagy in DKD</title>
<p>Increasing evidence shows that mitophagy plays an important role in the pathogenesis of DKD. The expression of autophagy markers, LC3I/LC3I and p62, was observed in rat mesangial cells in a time-dependent manner (<xref ref-type="bibr" rid="B8">Chen et&#x20;al., 2017b</xref>). It was observed that Parkin was recruited to the damaged mitochondria, and the production of autophagic vacuoles was significantly increased (<xref ref-type="bibr" rid="B129">Xu et&#x20;al., 2016</xref>). Similarly, decreased mRNA expression of autophagy-associated proteins, Beclin1, PINK1, and Parkin, was observed in renal mesangial cells (RMC) under HG conditions. Stimulation of mTOR/PINK1/Parkin-mediated mitophagy can improve renal inflammation, glomerular membrane dilatation, and extracellular matrix deposition (<xref ref-type="bibr" rid="B122">Wen et&#x20;al., 2020</xref>). Stimulation of BNIP3/Nix signal transduction also has the same intervention effect (<xref ref-type="bibr" rid="B45">Jin et&#x20;al., 2020</xref>).</p>
<p>Several studies have shown that the activation of the PI3K/AKT/mTOR pathway is involved in the autophagy of glomerular mesangial cells, which exhibited increased phosphorylation of mTOR (<xref ref-type="bibr" rid="B55">Lee et&#x20;al., 2019b</xref>), PI3K, Akt, and mTOR STZ-induced type 1 diabetic nephropathy (T1DN) (<xref ref-type="bibr" rid="B118">Wang et&#x20;al., 2020c</xref>). In another study, FBW7 was shown to be an upstream stimulator of mTOR and overexpression of FBW7 could inhibit mTOR signaling to increase autophagy and alleviate DKD (<xref ref-type="bibr" rid="B24">Gao et&#x20;al., 2019</xref>). Triptolide (TP) can restore autophagy and reduce fibrosis through the miR-141-3p/PTEN/Akt/mTOR pathway in DKD rats and human mesangial cells cultured with under HG conditions (<xref ref-type="bibr" rid="B64">Li et&#x20;al., 2017b</xref>). Ursolic acid can inhibit the activation of mTOR to reduce the accumulation of extracellular matrix and improve hypertrophy and proliferation of cells (<xref ref-type="bibr" rid="B73">Lu et&#x20;al., 2015</xref>). These studies suggest that autophagy and mitophagy play roles in renal protection.</p>
</sec>
<sec id="s1-17">
<title>Endothelial Cells and Mitophagy in DKD</title>
<p>As of date, only a few studies have been conducted on the role of mitophagy in endothelial cells. In db/db mice, an animal model of type 2 diabetes, glomerular LC3 accumulation is reduced and is accompanied by decreased accumulation of ATP and mtROS. When exposed to HG, mitochondrial glomerular endothelial cells (mGECs) were found to have decreased levels of LC3 - II, PINK, and parkin (<xref ref-type="bibr" rid="B110">Sun et&#x20;al., 2019</xref>). Glomerular apoptosis was significantly ameliorated in db/db mice using the mitophagy-activating factor Torin1, suggesting that mitophagy plays an important and possibly therapeutic role in this disease. Activation of Nrf2/ARE signaling promotes mitophagy in glomerular endothelial cells may restore diabetic nephropathy-induced mitochondrial dysfunction and impaired renal function (<xref ref-type="bibr" rid="B110">Sun et&#x20;al., 2019</xref>). In diabetic conditions, the mechanism underlying weakened mitophagy leading to glomerular lesions needs to be investigated further.</p>
</sec>
<sec id="s1-18">
<title>Prospects of Targeting Mitophagy Therapy in DKD</title>
<p>Given the key role of mitophagy in DKD, specific interventions targeting mitophagy to protect and restore mitochondrial function have become promising strategies for preventing, treating, and mitigating DKD. As of date, various compounds and Chinese herbal decoctions targeting mitophagy have been shown to protect the kidney from damage in&#x20;DKD.</p>
<p>A recent study showed that miR-379 deletion ameliorates features of DKD by enhancing adaptive mitophagy <italic>via</italic> FIS1 (<xref ref-type="bibr" rid="B49">Kato et&#x20;al., 2021</xref>). In additon, MitoQ and CoQ10 are mitochondria-targeting antioxidants that enhance mitophagy and clearance of damaged mitochondria in the kidney. CoQ10 modulates mtROS and Nrf2/ARE pathways to increase glomerular mitophagy and improves renal function and mitochondrial homeostasis in db/db mice (<xref ref-type="bibr" rid="B110">Sun et&#x20;al., 2019</xref>). MitoQ consists of ubiquinone (oxidized CoQ10) molecules conjugated to triphenylphosphonium (TPP) cation moiety, which can effectively prevent mitochondrial oxidative damage when compared with the prevention achieved by CoQ10 (<xref ref-type="bibr" rid="B97">Ross et&#x20;al., 2005</xref>; <xref ref-type="bibr" rid="B42">James et&#x20;al., 2007</xref>; <xref ref-type="bibr" rid="B84">Murphy and Smith, 2007</xref>). Renal function and tubular interstitial fibrosis in Ins2&#x2b;/-AkitaJ mice in a type 1 diabetes model were improved by oral administration of MitoQ (<xref ref-type="bibr" rid="B6">Chacko et&#x20;al., 2010</xref>), and in addition, there is evidence that MitoQ treatment also improved tubular injury and apoptosis in HG conditions, which is closely related to upregulation of Nrf2 and PINK/Parkin pathways to regulate mitochondrial phagocytosis in renal tubules (<xref ref-type="bibr" rid="B127">Xiao et&#x20;al., 2017</xref>).</p>
<p>D-gluconate is a potential pharmacological inhibitor of MIOX. It has a renal protective effect in DKD. D-gluconate therapy reversed STZ-induced inhibition of mitophagy in diabetic mice and improved the integrity of renal tubule cells (<xref ref-type="bibr" rid="B137">Zhan et&#x20;al., 2015</xref>). It was demonstrated that metformin, a classic antidiabetic agent, protects renal epithelial cells stimulated with HG <italic>in&#x20;vitro</italic> by activating PP2A and inhibiting NF-&#x3ba;B to reverse the expression of Parkin and mitophagy (<xref ref-type="bibr" rid="B141">Zhao and Sun, 2020</xref>). These results suggest that activation of mitophagy, especially of the PINK1/Parkin pathway, is an attractive target for improving diabetes-induced renal damage.</p>
<p>In addition, traditional Chinese medicine (TCM) has been widely used in the treatment of diabetes and its complications and has achieved good results (<xref ref-type="bibr" rid="B25">Tian et&#x20;al., 2019</xref>). However, there are relatively few studies on the potential therapeutic mechanisms of TCMs against diabetic nephropathy. Intriguingly, in db/db mice, AstragalosideIV (AS-IV) treatment reduced the expression of mitophagy-related proteins, PINK1, Parkin, p-Parkin (Ser65), and LC-3II, in the kidney, thereby, reducing proteinuria and promoting recovery from renal injur (<xref ref-type="bibr" rid="B72">Liu et&#x20;al., 2017</xref>). Similarly, treatment with Huangqi-Danshen decoction (HDD) improved glomerular hypertrophy and increased glomerular mesangial cells in db/db mice (<xref ref-type="bibr" rid="B71">Liu et&#x20;al., 2020b</xref>). This suggests that the mechanism underlying the effect of TCM against DKD may involve inhibition of the mitophagy activity of renal mitochondria.</p>
<p>Mitophagy inducers, such as resveratrol, rapamycin, quercetin, or berberine, which trigger multiple signaling pathways, are perceived as potential protective molecules against DKD. For example, resveratrol turns on the expression of Sirt, Beclin1, and BNIP3 (<xref ref-type="bibr" rid="B2">Ajoolabady et&#x20;al., 2020</xref>). Rapamycin, a pharmacological inhibitor of mTOR, stimulated autophagy and mitophagy, and alleviated nephrotoxicity by restoring the expression of PINK1 and Parkin (<xref ref-type="bibr" rid="B119">Wang et&#x20;al., 2018b</xref>). Quercetin can alleviate kidney fibrosis by reducing the senescence of renal tubular epithelial cells through the SIRT1/PINK1/mitophagy axis (<xref ref-type="bibr" rid="B70">Liu et&#x20;al., 2020c</xref>). Berberine alleviates cisplatin-induced acute kidney injury by regulating mitophagy via the PINK1/Parkin pathway (<xref ref-type="bibr" rid="B93">Qi et&#x20;al., 2020</xref>). To this end, the search for inducers of mitophagy, with minimal side effects, is pertinent.</p>
<p>Mitophagy is considered to be a protective mechanism under pathological conditions. However, with the progression of diabetic nephropathy, mitophagy becomes overburdened or impaired and mitochondrial fragments accumulate, leading to cell death. TCM treatment is counterintuitive to the regulation of mitophagy activity in DKD kidney by MITOQ, CoQ10, and D-gluconate. A possible explanation is that mitophagy plays a role in kidney protection, but its long-term activation may lead to cell damage. This hypothesis needs to be tested in clinical trials (<xref ref-type="table" rid="T1">Table&#x20;1</xref>).</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Summary of drugs aimed at improving mitochondrial dysfunction in DKD.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Agent</th>
<th align="center">Mechanism</th>
<th align="center">Model</th>
<th align="center">Influence factor</th>
<th align="center">Effect on DKD and repair</th>
<th align="center">Effect on mitophagy</th>
<th align="center">Pub. year</th>
<th align="center">References</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">d-gluconic</td>
<td align="left">inhibitor of MIOX</td>
<td align="left">diabetic mice</td>
<td align="left">PINK1, MIOX, ROS</td>
<td align="left">Attenuated DKD</td>
<td align="center">Promote</td>
<td align="center">2015</td>
<td align="left">
<xref ref-type="bibr" rid="B137">Zhan et&#x20;al. (2015)</xref>
</td>
</tr>
<tr>
<td align="left">CoQ10</td>
<td align="left">Mitochondria-targeted antioxidant</td>
<td align="left">db/db type 2 diabetic mice</td>
<td align="left">MtROS, Nrf2/ARE</td>
<td align="left">Attenuated DKD</td>
<td align="center">Promote</td>
<td align="center">2019</td>
<td align="left">
<xref ref-type="bibr" rid="B110">Sun et&#x20;al. (2019)</xref>
</td>
</tr>
<tr>
<td align="left">MitoQ</td>
<td align="left">Mitochondria-targeted antioxidant</td>
<td align="left">db/db mice</td>
<td align="left">Nrf2/Keap1 and PINK/Parkin</td>
<td align="left">Attenuated DKD</td>
<td align="center">Promote</td>
<td align="center">2017</td>
<td align="left">
<xref ref-type="bibr" rid="B127">Xiao et&#x20;al. (2017)</xref>
</td>
</tr>
<tr>
<td align="left">HDD</td>
<td align="left"/>
<td align="left">db/db mice</td>
<td align="left">PINK1/Parkin</td>
<td align="left">Reduces urinary albumin excretion and improves kidney injury</td>
<td align="center">Restrain</td>
<td align="center">2020</td>
<td align="left">
<xref ref-type="bibr" rid="B71">Liu et&#x20;al. (2020b)</xref>
</td>
</tr>
<tr>
<td align="left">AS-IV</td>
<td align="left"/>
<td align="left">db/db mice</td>
<td align="left"/>
<td align="left">Attenuated DKD</td>
<td align="center">Restrain</td>
<td align="center">2017</td>
<td align="left">
<xref ref-type="bibr" rid="B72">Liu et&#x20;al. (2017)</xref>
</td>
</tr>
<tr>
<td align="left">metformin</td>
<td align="left"/>
<td align="left"/>
<td align="left">PP2A, NF-&#x3ba;B, Parkin</td>
<td align="left">Attenuated DKD</td>
<td align="center">Promote</td>
<td align="center">2020</td>
<td align="left">
<xref ref-type="bibr" rid="B141">Zhao and Sun (2020)</xref>
</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
</sec>
<sec sec-type="conclusion" id="s2">
<title>Conclusion</title>
<p>There is no definitive cure for diabetic nephropathy. The main treatment options for patients with diabetic nephropathy are to reduce cardiovascular risk, control blood glucose, blood pressure, blood lipids, and institute lifestyle changes. Drugs used to treat diabetes such as the renin-angiotensin system (RAS) inhibitors, including angiotensin-converting enzyme inhibitor (ACEI) and angiotensin receptor blocker (ARB) (<xref ref-type="bibr" rid="B74">Lv et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B80">Miyazaki et&#x20;al., 2015</xref>). Drugs that control blood sugar include sodium-glucose cotransporter-2 inhibitors (SGLT2i) (<xref ref-type="bibr" rid="B22">Fioretto et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B50">Kawanami et&#x20;al., 2017</xref>), glucagon-like peptide-1 receptor agonists (GLP-1 RAs), and dipeptidyl peptidase IV (DPP-4) inhibitors (<xref ref-type="bibr" rid="B41">Inzucchi et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B92">Pugliese et&#x20;al., 2019</xref>); however, side effects of these drugs have been reported (<xref ref-type="bibr" rid="B103">Seger et&#x20;al., 2021</xref>). Additionally, early prevention or slowing down the progression of DKD cannot effectively prevent the development of end-stage renal disease; therefore, it is particularly important to find new therapeutic targets. There is evidence that mitochondrial-targeted therapy for diabetic nephropathy may have a renal protective effect. However, related studies have shown that excessive mitophagy may also lead to cell damage. Future studies are needed to reveal the exact role of mitophagy in the renal tubules and glomeruli in DKD. We also need to explore the roles of other cellular processes associated with mitophagy in DKD, which will further promote our understanding of the molecular mechanisms behind DKD and the discovery of potential treatment methods.</p>
</sec>
</body>
<back>
<sec id="s3">
<title>Author Contributions</title>
<p> XZ and JF were in charge of the writing of manuscript. XL was in charge of editing the manuscript. DW and QW was in charge of the revision of manuscript. SL and CS conceived and designed this study, reviewed the manuscript and was responsible for the overall content as guarantor. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="s4">
<title>Funding</title>
<p>The research by the authors is supported by a grant (No. 81803941) from Chinese National Natural Science Foundation, China.</p>
</sec>
<sec sec-type="COI-statement" id="s5">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s6">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ack>
<p>We also wish to sincerely thank editage for the English language review.</p>
</ack>
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