<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article article-type="research-article" dtd-version="2.3" xml:lang="EN" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Catal.</journal-id>
<journal-title>Frontiers in Catalysis</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Catal.</abbrev-journal-title>
<issn pub-type="epub">2673-7841</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">1213803</article-id>
<article-id pub-id-type="doi">10.3389/fctls.2023.1213803</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Catalysis</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Theoretical investigation of catalytic n-butane isomerization over H-SSZ-13</article-title>
<alt-title alt-title-type="left-running-head">Spiske et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fctls.2023.1213803">10.3389/fctls.2023.1213803</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Spiske</surname>
<given-names>Lucas</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2296957/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Plessow</surname>
<given-names>Philipp N.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Kazmierczak</surname>
<given-names>Kamila</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Vandegehuchte</surname>
<given-names>Bart D.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Studt</surname>
<given-names>Felix</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1063488/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Institute of Catalysis Research and Technology</institution>, <institution>Karlsruhe Institute of Technology</institution>, <addr-line>Karlsruhe</addr-line>, <country>Germany</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>TotalEnergies OneTech Belgium</institution>, <addr-line>Feluy</addr-line>, <country>Belgium</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1128931/overview">Tibor Szilv&#xe1;si</ext-link>, University of Alabama, United States</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1190579/overview">Florian Goeltl</ext-link>, University of Arizona, United States</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1145115/overview">Benjamin W. J. Chen</ext-link>, Technology and Research (A&#x2217;STAR), Singapore</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Felix Studt, <email>Felix.studt@kit.edu</email>
</corresp>
</author-notes>
<pub-date pub-type="epub">
<day>05</day>
<month>07</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>3</volume>
<elocation-id>1213803</elocation-id>
<history>
<date date-type="received">
<day>28</day>
<month>04</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>26</day>
<month>05</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Spiske, Plessow, Kazmierczak, Vandegehuchte and Studt.</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Spiske, Plessow, Kazmierczak, Vandegehuchte and Studt</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Hybrid density functional theory calculations are used to investigate different mechanisms of the isomerization of n-butane to isobutane via intermediate formation of olefins. The monomolecular mechanism for isomerization of butene and isobutene is found to be prevalent, with a Gibbs free energy barrier of 155&#xa0;kJ/mol at 400&#xb0;C, compared to the bimolecular mechanism (190&#xa0;kJ/mol) due to less favorable entropy for the latter. Hydrogen transfer reactions that convert olefins into alkanes (and <italic>vice versa</italic>) are also included in the investigations, and show a free energy barrier of 203&#xa0;kJ/mol for conversion of isobutene to isobutane. Additionally, a methyl transfer mechanism is discussed as a possible pathway for formation of C<sub>3</sub> and C<sub>5</sub> side products, in comparison to the bimolecular mechanism; the highest barrier of the initial methyl transfer is calculated to be 227&#xa0;kJ/mol. We discuss the influence of entropy and anharmonicity on all mechanisms, stating that through the uncertainties in computational methods when calculating these systems, the calculated reaction barriers are likely to be overestimated here.</p>
</abstract>
<kwd-group>
<kwd>zeolites</kwd>
<kwd>isomerization</kwd>
<kwd>chabazite</kwd>
<kwd>H-SSZ-13</kwd>
<kwd>DFT</kwd>
<kwd>
<italic>ab initio</italic>
</kwd>
<kwd>hydrocarbons</kwd>
</kwd-group>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Modelling, Theory and Computational Catalysis</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>In the cracking and refining of crude oil, short-chain hydrocarbons, like butane, are important products. The isomerization of n-butane to isobutane is performed on an industrial scale (<xref ref-type="bibr" rid="B29">Ono, 2003</xref>). The demand for isobutane is expected to further increase (<xref ref-type="bibr" rid="B17">Isobutane market to reach USD, 2021</xref>) since it is a feedstock, e.g., high octane fuels (<xref ref-type="bibr" rid="B38">Potter et al., 2020</xref>) and C<sub>4</sub> alkylation reactions (<xref ref-type="bibr" rid="B51">Wulfers and Jentoft, 2015</xref>), and an important reactant in methyl-tert-butyl ether (MTBE) synthesis (<xref ref-type="bibr" rid="B29">Ono, 2003</xref>).</p>
<p>While the skeletal isomerization of long-chain olefins is rather well-understood and thought to occur via monomolecular pathways (<xref ref-type="bibr" rid="B42">Rey et al., 2019a</xref>; <xref ref-type="bibr" rid="B41">Rey et al., 2019b</xref>), mechanisms for the isomerization of n-butane are still debated, with experiments suggesting that a bimolecular mechanism might also play a dominant role (<xref ref-type="bibr" rid="B8">Bearez and Guisnet, 1983</xref>; <xref ref-type="bibr" rid="B39">Asuquo and Lercher, 1995</xref>; <xref ref-type="bibr" rid="B16">Hou&#x17e;vi&#x10d;ka and Ponec, 1997</xref>; <xref ref-type="bibr" rid="B29">Ono, 2003</xref>; <xref ref-type="bibr" rid="B28">Luzgin et al., 2005</xref>; <xref ref-type="bibr" rid="B45">Tuma and Sauer, 2005</xref>; <xref ref-type="bibr" rid="B20">Kangas et al., 2008</xref>). Although both the monomolecular and bimolecular mechanisms are widely accepted as the two possibilities for n-butane isomerization, no clear consensus has been reached yet about the extent of these pathways in product formation. While earlier research proposed the bimolecular mechanism as the main reaction pathway (<xref ref-type="bibr" rid="B8">Bearez and Guisnet, 1983</xref>; <xref ref-type="bibr" rid="B39">Asuquo and Lercher, 1995</xref>), recent research states that the monomolecular mechanism is favored (<xref ref-type="bibr" rid="B16">Hou&#x17e;vi&#x10d;ka and Ponec, 1997</xref>; <xref ref-type="bibr" rid="B51">Wulfers and Jentoft, 2015</xref>; <xref ref-type="bibr" rid="B14">He et al., 2017</xref>). The bimolecular pathway, however, is thought to be responsible for the formation of unwanted products that lead to lower product selectivity and deactivation of the catalyst (<xref ref-type="bibr" rid="B16">Hou&#x17e;vi&#x10d;ka and Ponec, 1997</xref>). In a recent article, the influence of both acid site density and support acidity/metal balance is discussed as an important factor impacting the participation ratio of the monomolecular to bimolecular mechanism (<xref ref-type="bibr" rid="B38">Potter et al., 2020</xref>).</p>
<p>Both mechanisms are thought to occur via the formation of olefinic intermediates. Recently, the effect of olefin concentration in the feed on the conversion and product distribution has been investigated, and calculation of the activation energy for isobutane formation indicates a monomolecular mechanism (<xref ref-type="bibr" rid="B51">Wulfers and Jentoft, 2015</xref>). However, further investigations are still needed to understand how side products with different chain lengths such as C<sub>3</sub> and C<sub>5</sub> are formed.</p>
<p>The aim of this work is to investigate the isomerization pathways catalyzed by the H-SSZ-13 zeolite (CHA structure), chosen as a model catalyst due to its computational simplicity and common use. The monomolecular isomerization pathway (<xref ref-type="bibr" rid="B14">He et al., 2017</xref>), the bimolecular pathway, and alkane&#x2013;alkene hydrogen transfers (HT) are modeled using hierarchical cluster models and accurate hybrid-functional DFT calculations. Additional mechanisms that lead to C<sub>3</sub> and C<sub>5</sub> products are also investigated.</p>
</sec>
<sec id="s2">
<title>2 Computational details</title>
<p>The H-SSZ-13 zeolite with CHA structure has a narrow pore window size of 0.38 &#xd7; 0.38&#xa0;nm (<xref ref-type="bibr" rid="B5">Breck and Breck, 1973</xref>). A CHA unit cell containing 36&#xa0;T-sites has been chosen for this work. The optimized periodic CHA structure has lattice parameters of <inline-formula id="inf1">
<mml:math id="m1">
<mml:mrow>
<mml:mi>a</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mi>b</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>13.625</mml:mn>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mi mathvariant="normal">&#xc5;</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>c</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>15.067</mml:mn>
<mml:mtext>&#x2009;</mml:mtext>
<mml:mi mathvariant="normal">&#xc5;</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>&#x3b1;</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mi>&#x3b2;</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mrow>
<mml:mn>90</mml:mn>
<mml:mo>&#xb0;</mml:mo>
</mml:mrow>
<mml:mo>,</mml:mo>
<mml:mi>&#x3b3;</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>120</mml:mn>
<mml:mo>&#xb0;</mml:mo>
<mml:mo>,</mml:mo>
<mml:mi>V</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>2422.314</mml:mn>
<mml:mtext>&#x2009;</mml:mtext>
<mml:msup>
<mml:mi mathvariant="normal">&#xc5;</mml:mi>
<mml:mn>3</mml:mn>
</mml:msup>
</mml:mrow>
</mml:math>
</inline-formula>. As CHA has only one distinguishable T-site, substitution of one out of the 36 Si atoms in the unit cell with Al, and compensating the charge with an acidic H atom, leads to the structure shown in the SI in <xref ref-type="sec" rid="s10">Supplementary Figure S1A</xref>, with a Si/Al ratio of 35.</p>
<p>Geometry optimizations and energy calculations of periodic structures have been performed with the VASP program package (<xref ref-type="bibr" rid="B23">Kresse and Hafner, 1993</xref>; <xref ref-type="bibr" rid="B24">Kresse and Hafner, 1994</xref>; <xref ref-type="bibr" rid="B21">Kresse and Furthm&#xfc;ller, 1996a</xref>; <xref ref-type="bibr" rid="B22">Kresse and Furthm&#xfc;ller, 1996b</xref>; <xref ref-type="bibr" rid="B25">Kresse and Joubert, 1999</xref>) in version 5.4.1 using the atomic simulation environment (ASE) Python library as a facilitator (<xref ref-type="bibr" rid="B15">Hjorth Larsen et al., 2017</xref>), at the PBE-D3 level of theory (<xref ref-type="bibr" rid="B31">Perdew et al., 1997</xref>; <xref ref-type="bibr" rid="B13">Grimme et al., 2010</xref>). The projector augmented wave (PAW) method was used with standard PAW potentials, an energy cutoff of 400&#xa0;eV for the wave function, an SCF energy convergence criterion of 10<sup>&#x2013;8</sup>&#xa0;eV, and a geometry convergence criterion of 10<sup>&#x2013;2</sup>&#xa0;eV/&#x00C5; for atomic forces. The Brillouin zone was sampled only at the &#x393;-Point. Transition state optimization was performed using automated relaxed potential energy surface scans (ARPESS) (<xref ref-type="bibr" rid="B34">Plessow, 2018</xref>). As there are four different oxygen sites that the acid proton can occupy, it has been ensured that for all structures, the energetically most favorable structure or transition state is chosen. For the clean acid site, the hydrogen atom is bound to the crystallographic O<sub>4</sub> position. Harmonic frequencies were computed based on a partial Hessian, where the adsorbate as well as the acid site (Al) and its four neighboring oxygen and silicon atoms are included. All stationary states were confirmed to contain the correct amount of imaginary harmonic frequencies, i.e., 0 for minima and 1 for transition states. Entropy contributions at the given temperature were calculated using the harmonic approximation, where all frequencies under a threshold of 12&#xa0;cm<sup>-1</sup> are treated as 12&#xa0;cm<sup>-1</sup> to avoid inaccuracies in the entropy for low-frequency vibrations (<xref ref-type="bibr" rid="B7">Brogaard et al., 2014a</xref>; <xref ref-type="bibr" rid="B6">Brogaard et al., 2014b</xref>).</p>
<p>To improve the accuracy of the computed energies at the PBE-D3 level, which widely underestimates barriers in zeolite catalysis (<xref ref-type="bibr" rid="B12">Goncalves et al., 2019</xref>), smaller non-periodic 46T cluster models were constructed (see <xref ref-type="sec" rid="s10">Supplementary Figure S1B</xref> in the SI), as described by <xref ref-type="bibr" rid="B12">Goncalves et al. (2019</xref>). Single-point calculations were performed for them, using the TURBOMOLE program package (<xref ref-type="bibr" rid="B2">Ahlrichs et al., 1989</xref>; <xref ref-type="bibr" rid="B46">Von Arnim and Ahlrichs, 1998</xref>) and the hybrid M06 functional (<xref ref-type="bibr" rid="B52">Zhao and Truhlar, 2008</xref>), as this has been shown to provide very accurate reaction energies and barriers (<xref ref-type="bibr" rid="B12">Goncalves et al., 2019</xref>). Corrections were calculated according to Equation <xref ref-type="disp-formula" rid="e1">(1)</xref>, where the differences between the PBE-D3 functional (<xref ref-type="bibr" rid="B31">Perdew et al., 1997</xref>; <xref ref-type="bibr" rid="B30">Perdew et al., 2008</xref>; <xref ref-type="bibr" rid="B32">Perdew et al., 2009</xref>) and the M06 functional (<xref ref-type="bibr" rid="B52">Zhao and Truhlar, 2008</xref>), both using the def2-TZVPP basis set (<xref ref-type="bibr" rid="B50">Weigend et al., 2003</xref>; <xref ref-type="bibr" rid="B49">Weigend and Ahlrichs, 2005</xref>), were calculated. The final energy E of a structure is accordingly given by<disp-formula id="e1">
<mml:math id="m2">
<mml:mrow>
<mml:mi mathvariant="bold-italic">E</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:msubsup>
<mml:mi mathvariant="bold-italic">E</mml:mi>
<mml:mrow>
<mml:mi mathvariant="bold-italic">P</mml:mi>
<mml:mi mathvariant="bold-italic">B</mml:mi>
<mml:mi mathvariant="bold-italic">E</mml:mi>
<mml:mo>&#x2212;</mml:mo>
<mml:mi mathvariant="bold-italic">D</mml:mi>
<mml:mn mathvariant="bold">3</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi mathvariant="bold-italic">P</mml:mi>
<mml:mi mathvariant="bold-italic">B</mml:mi>
<mml:mi mathvariant="bold-italic">C</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2b;</mml:mo>
<mml:msubsup>
<mml:mi mathvariant="bold-italic">E</mml:mi>
<mml:mrow>
<mml:mrow>
<mml:mrow>
<mml:mi mathvariant="bold-italic">M</mml:mi>
<mml:mn mathvariant="bold">06</mml:mn>
</mml:mrow>
<mml:mo>/</mml:mo>
<mml:mrow>
<mml:mi mathvariant="bold-italic">def</mml:mi>
<mml:mo>&#x2061;</mml:mo>
<mml:mn mathvariant="bold">2</mml:mn>
</mml:mrow>
</mml:mrow>
<mml:mo>&#x2212;</mml:mo>
<mml:mi mathvariant="bold-italic">T</mml:mi>
<mml:mi mathvariant="bold-italic">Z</mml:mi>
<mml:mi mathvariant="bold-italic">V</mml:mi>
<mml:mi mathvariant="bold-italic">P</mml:mi>
<mml:mi mathvariant="bold-italic">P</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn mathvariant="bold">46</mml:mn>
<mml:mi mathvariant="bold">T</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2212;</mml:mo>
<mml:msubsup>
<mml:mi mathvariant="bold-italic">E</mml:mi>
<mml:mrow>
<mml:mi mathvariant="bold-italic">P</mml:mi>
<mml:mi mathvariant="bold-italic">B</mml:mi>
<mml:mi mathvariant="bold-italic">E</mml:mi>
<mml:mo>&#x2212;</mml:mo>
<mml:mrow>
<mml:mrow>
<mml:mi mathvariant="bold-italic">D</mml:mi>
<mml:mn mathvariant="bold">3</mml:mn>
</mml:mrow>
<mml:mo>/</mml:mo>
<mml:mrow>
<mml:mi mathvariant="bold-italic">def</mml:mi>
<mml:mo>&#x2061;</mml:mo>
<mml:mn mathvariant="bold">2</mml:mn>
</mml:mrow>
</mml:mrow>
<mml:mo>&#x2212;</mml:mo>
<mml:mi mathvariant="bold-italic">T</mml:mi>
<mml:mi mathvariant="bold-italic">Z</mml:mi>
<mml:mi mathvariant="bold-italic">V</mml:mi>
<mml:mi mathvariant="bold-italic">P</mml:mi>
<mml:mi mathvariant="bold-italic">P</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn mathvariant="bold">46</mml:mn>
<mml:mi mathvariant="bold">T</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>.</mml:mo>
</mml:mrow>
</mml:math>
<label>(1)</label>
</disp-formula>
</p>
<p>Free energies were calculated in the harmonic oscillator approximation at T &#x3d; 400&#xb0;C and <italic>p</italic> &#x3d; 1&#xa0;bar.</p>
</sec>
<sec sec-type="results|discussion" id="s3">
<title>3 Results and discussion</title>
<sec id="s3-1">
<title>3.1 Reaction overview</title>
<p>The H-SSZ-13 zeolite in the chabazite structure has been chosen due to its simplicity with only one possible T-site for Al substitution. A general scheme of the reaction mechanism is shown in <xref ref-type="fig" rid="F1">Figure 1</xref>. It is important to note that the direct skeletal isomerization of n-butane to isobutane is kinetically hindered and does not take place at reasonable reaction conditions (<xref ref-type="bibr" rid="B20">Kangas et al., 2008</xref>). It is, therefore, generally assumed that this reaction involves the formation of olefins through dehydration of n-butane. We choose a temperature of 400&#xb0;C for our calculations in this work, as it is representative of general reaction conditions in butane isomerization, even though it lies toward the upper end of temperatures used for this reaction (<xref ref-type="bibr" rid="B39">Asuquo and Lercher, 1995</xref>; <xref ref-type="bibr" rid="B1">Adeeva and Sachtler, 1997</xref>; <xref ref-type="bibr" rid="B51">Wulfers and Jentoft, 2015</xref>; <xref ref-type="bibr" rid="B14">He et al., 2017</xref>; <xref ref-type="bibr" rid="B47">Wang et al., 2018</xref>). We calculated the direct dehydrogenation barrier of n-butane to the n-butyl cation and H<sub>2</sub> to be 247&#xa0;kJ/mol at 400&#xb0;C (see <xref ref-type="sec" rid="s10">Supplementary Figure S2</xref>) and, therefore, disregard this reaction as a possibility for olefin production. However, as shown in <xref ref-type="fig" rid="F1">Figure 1</xref>, olefins only need to be present in catalytic amounts as they can be interconverted by hydrogen transfer (HT) reactions, though each butane has to go through an olefinic state in the reaction mechanism.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Overview of the n-butane isomerization reaction mechanism. The actual isomerization reaction is that of 2-butene to isobutene, shown in the top left. Through methyl transfer, hydrocarbons of differing carbon chain length can be obtained as well. n-Butane, together with an olefin, is catalytically converted by two successive hydrogen transfers (HTs) to the respective alkane and 2-butene, which can then again isomerize to isobutene. The main reaction of n-butane to isobutane is shown in red.</p>
</caption>
<graphic xlink:href="fctls-03-1213803-g001.tif"/>
</fig>
<p>Using olefins as the reactive species, we will discuss the outcome of our calculations for the monomolecular and bimolecular isomerization reactions of 2-butene to isobutene along the lines discussed in the literature. In principle, 1-butene could also act as a reactant, as the isomerization between 1-butene and 2-butene is facile at 128&#xa0;kJ/mol at 400&#xb0;C (see <xref ref-type="sec" rid="s10">Supplementary Figure S3</xref>), but we will specifically focus on 2-butene as the reactant in this work. Afterward, we will discuss the energetics of the two HTs that convert olefins into alkanes and <italic>vice versa</italic>. Last, we will take a look at a methyl transfer (MT) mechanism involving surface methoxy species (SMS) as a potential source for the side products propane and pentane. This reaction pathway also involves two HTs and can be seen as the reverse reaction of the methylation of olefins in the methanol-to-olefin process (<xref ref-type="bibr" rid="B37">Plessow and Studt, 2017</xref>). Last, we compare the results for the different mechanisms and assess their influence on the overall reaction performance.</p>
</sec>
<sec id="s3-2">
<title>3.2 Monomolecular mechanism</title>
<p>The monomolecular pathway (also called unimolecular pathway) was investigated based on the transition state geometries reported by <xref ref-type="bibr" rid="B14">He et al. (2017</xref>), who investigated the reactions over H-ZSM-23 and H-ZSM-48 zeolites using the combined B3LYP:UFF method ONIOM scheme. The related reaction mechanism is shown in black in <xref ref-type="fig" rid="F2">Figure 2A</xref>, and the corresponding enthalpy and free energy diagrams for the pathway are shown in <xref ref-type="fig" rid="F2">Figures 2B, C</xref>, respectively. Images of transition states, as well as important bond distances, are shown in <xref ref-type="sec" rid="s10">Supplementary Figure S2</xref>. This reaction pathway is similar to the one proposed by He et al., albeit with the difference that we focused on 2-butene as the reactant, while He et al. started from 1-butene. As the double-bond migration in 1-butene is much faster than the skeletal isomerization reactions (<xref ref-type="bibr" rid="B20">Kangas et al., 2008</xref>), this does not affect the findings presented here. There is another difference in the proposed mechanisms: He et al. found that 2-butene (E2) is protonated by the acid site proton and immediately forms n-butoxide. The n-butoxide then isomerizes to isobutoxide, passing through a cyclopropyl transition state. Our calculations indicate that the 2-butyl cation (A1) that forms after the protonation is a local minimum. However, the barriers for decomposition of this cation toward 2-butene or isobutoxide are very low (6 and 3&#xa0;kJ/mol, respectively), making it an unstable intermediate. The 2-butyl cation isomerizes through a structurally very similar cyclopropyl transition state to form isobutoxide (A2), see <xref ref-type="sec" rid="s10">Supplementary Table S1</xref>. This is also true for the following two transition state structures, which are again very similar to those identified for H-ZSM-23 and H-ZSM-5 by <xref ref-type="bibr" rid="B14">He et al. (2017</xref>). In the next step, the C&#x2013;O bond of the isobutoxide is broken; the proton from the adjacent carbon then shifts over to yield the stable tertiary isobutyl cation (A3). In the final step, the acid site abstracts a proton from the cation, and isobutene (P1) is formed. Isobutene can then desorb from the pore into the gas phase, leaving the empty zeolite behind (P2).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>
<bold>(A)</bold> Overview of the monomolecular (black) and bimolecular (red) 2-butene isomerization mechanisms, referenced to the empty H-SSZ-13 zeolite and 2-butene in the gas phase. Free energies of intermediate structures are shown next to the structures; free energies of the transition state structures are above the reaction arrows. All energies and barriers are calculated at T &#x3d; 400&#xb0;C. <bold>(B)</bold> Enthalpy diagram of the monomolecular and bimolecular 2-butene isomerization mechanisms. <bold>(C)</bold> Free energy diagram of the monomolecular and bimolecular 2-butene isomerization mechanisms. The highest barriers of the overall mechanisms are 190 and 152&#xa0;kJ/mol, respectively. All energies are given in kJ/mol, at T &#x3d; 400&#xb0;C and 1 bar.</p>
</caption>
<graphic xlink:href="fctls-03-1213803-g002.tif"/>
</fig>
<p>Our calculated pathway via the stable 2-butyl cation has an overall free energy barrier of 87&#xa0;kJ/mol for conversion of 2-butene to isobutoxide, which is 39&#xa0;kJ/mol lower than that of the previously considered mechanism over n-butoxide, which we also optimized in H-SSZ-13 (see <xref ref-type="sec" rid="s10">Supplementary Figure S5</xref> in the SI). Comparing the free energy diagram of this reaction (<xref ref-type="fig" rid="F2">Figure 2C</xref>, black line) to the one in the work of <xref ref-type="bibr" rid="B14">He et al. (2017</xref>), we see that, with this lower isomerization barrier, the reaction from isobutoxide to the isobutyl cation now becomes the rate-determining step.</p>
<p>When referencing all energies and barriers to the empty H-SSZ-13 zeolite and 2-butene in the gas phase, we obtain an overall reaction barrier of only 152&#xa0;kJ/mol at 400&#xb0;C (see <xref ref-type="fig" rid="F2">Figure 2C</xref>) for the considered monomolecular mechanism.</p>
</sec>
<sec id="s3-3">
<title>3.2 Bimolecular mechanism</title>
<p>In the bimolecular mechanism, two C<sub>4</sub> olefins adsorb within the same zeolite pore and react with each other, forming a C<sub>8</sub> intermediate that can undergo different hydrogen and methyl shifts. These shifts have been calculated to have very low reaction barriers (<xref ref-type="bibr" rid="B35">Plessow and Studt, 2020</xref>), which leads to a multitude of different C<sub>8</sub> isomers being produced. After isomerization, the C<sub>8</sub> intermediates can crack again to yield either different C<sub>4</sub> species, in our case, n-butene and isobutene, or C<sub>3</sub> and C<sub>5</sub> olefins through uneven <italic>&#xdf;</italic>-scission. It is important to note that herein, we only considered one specific pathway for the C<sub>8</sub> intermediate that yields the desired products, isobutene and 2-butene. We did this, as we can directly compare this to other mechanisms herein. The bimolecular mechanism investigated is shown schematically in <xref ref-type="fig" rid="F2">Figure 2A</xref> in red; images of transition states and important bond distances are shown in <xref ref-type="sec" rid="s10">Supplementary Figure S6</xref>.</p>
<p>After adsorption of two 2-butene molecules into the zeolite pore (B1), the 2-butene molecule closest to the active site is protonated, which triggers the formation of a new C&#x2013;C bond between the now positively charged carbon adjacent to the protonated carbon and one of the sp<sup>2</sup> carbons of the second 2-butene molecule, forming the 3,4-dimethylhexan-2-ylium ion (B2). This ion then first undergoes a methyl shift to a 2,4-dimethylhexan-3-ylium ion (B3) and then an HT to form the more stable tertiary 2,4-dimethylhexan-2-ylium ion (B4). Both these shifts have rather low barrier energies of 38 and 28&#xa0;kJ/mol, respectively, and are, therefore, expected to happen fast once B2 has been formed. Last, the 2,4-dimethylhexan-2-ylium ion can crack into isobutene and the 2-butyl ion, which is readily deprotonated by the acid site to yield 2-butene (B5). The first and last transition states of the bimolecular pathway, olefin dimerization and cracking, mirror each other, with almost identical bond lengths in the transition states (see <xref ref-type="sec" rid="s10">Supplementary Table S2</xref>). After desorption of both olefins (P1 and P2), one of the two reacting 2-butenes is isomerized to isobutene.</p>
<p>When comparing the calculated enthalpic (<xref ref-type="fig" rid="F2">Figure 2B</xref>) and free energy pathways (<xref ref-type="fig" rid="F2">Figure 2C</xref>) for the bimolecular mechanism, it is evident that there is a large difference originating from the huge entropy penalty due to the adsorption of two olefins within the pore of H-SSZ-13. While the bimolecular mechanism seems to be more favorable than the monomolecular mechanism as observed from <xref ref-type="fig" rid="F2">Figure 2B</xref>, the inclusion of entropic contributions reveals that the bimolecular mechanism has higher overall free energy barriers. It should be noted that a similar effect has been observed for the concerted and stepwise mechanism of the methylation of olefins (<xref ref-type="bibr" rid="B6">Brogaard et al., 2014b</xref>). The most important difference between the monomolecular and bimolecular pathways is that in the latter, co-adsorption of a second olefin into the zeolite pore is necessary (E2 to B1).</p>
<p>This co-adsorption is unfavorable because of strong entropic effects, giving rise to a very high free energy after co-adsorption. The isomerization, on the other hand, is not very demanding: From two 2-butene molecules adsorbed in H-SSZ-13, the difference to the highest transition state is 62&#xa0;kJ/mol, which is 36&#xa0;kJ/mol lower than for the monomolecular pathway (98&#xa0;kJ/mol). However, taking the adsorption energies and entropic penalties into account, the free energy difference between the reference molecules and the highest transition state is 190&#xa0;kJ/mol for the bimolecular pathway, whereas it amounts to only 152&#xa0;kJ/mol for the monomolecular pathway. This shows that when looking at the actual reaction barriers, it is essential to consider entropic effects. Doing so, we see that the bimolecular pathway has an overall free energy barrier that is 38&#xa0;kJ/mol higher than that from the monomolecular pathway.</p>
<p>One of the reasons why the bimolecular pathway has been considered for n-butane isomerization is that through the possibility of uneven <italic>&#xdf;</italic>-scission, it can explain side product hydrocarbons with chain lengths other than 4. A barrier for the cracking of 2,3,4-trimethylpent-2-ene into C<sub>3</sub> and <italic>iso</italic>-C<sub>5</sub> has been calculated in earlier work (<xref ref-type="bibr" rid="B36">Plessow and Studt, 2018</xref>) and is shown to be 168&#xa0;kJ/mol; 57&#xa0;kJ/mol higher than that of the even scission of a similar C<sub>8</sub> intermediate (E&#x2212;3,4,4-trimethylpent-2-ene into C<sub>4</sub> and <italic>iso</italic>-C<sub>4</sub>). Other uneven <italic>&#xdf;</italic>-scission reactions are calculated to exhibit even higher barriers. This shows that the even cracking toward two C<sub>4</sub> species is favored for C<sub>8</sub> cracking, likely because of the ability to form the stable <italic>t</italic>-butyl cation intermediate.</p>
<p>For the adsorption of alkanes in zeolites, investigations have been carried out assuming a loss of 1/3 of the molecule&#xb4;s translational entropy upon adsorption, as the adsorbed species are still able to retain some translational modes inside the zeolite pore (<xref ref-type="bibr" rid="B18">Janda et al., 2016</xref>; <xref ref-type="bibr" rid="B9">Dauenhauer and Abdelrahman, 2018</xref>). We used this approximation herein (see <xref ref-type="sec" rid="s10">Supplementary Figure S9</xref> in the SI) and found free energy barriers of 95&#x00a0;kJ/mol for the monomolecular and 80&#x00a0;kJ/mol for the bimolecular pathway. This should be seen as a lower bound, as we would expect that a significantly higher fraction of translational entropy is lost when considering the tightly bound transition states (see <xref ref-type="sec" rid="s10">Supplementary Figures S4C, S6A</xref>). However, this analysis nicely highlights that a different treatment of entropic contribution would decrease the overall barriers for the bimolecular pathway by twice the amount, hence decreasing their free energy differences.</p>
</sec>
<sec id="s3-4">
<title>3.3 Intermolecular hydrogen transfer mechanism</title>
<p>Until this point, we have only discussed the isomerization reaction of 2-butene to isobutene. A reaction mechanism for HTs between olefins and hydrocarbons is illustrated in <xref ref-type="fig" rid="F3">Figure 3</xref> for two C<sub>4</sub> molecules as reactants. Images of the two transition states and important bond distances are shown for the reaction of n-butane with isobutene in <xref ref-type="sec" rid="s10">Supplementary Figure S7</xref>. The free energies and barriers for propene, <italic>iso</italic>-butene, and 2-methyl-2-butene as the reactants are shown in <xref ref-type="table" rid="T1">Table 1</xref>.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Mechanistic scheme of the HT reactions to convert selected alkenes into the respective saturated alkanes. Shown here in blue is the mechanism for converting isobutene into isobutane; the same mechanism is used for converting propene into propane and 2-methylbut-2-ene into 2-methylbutane. Structure H2 needs to rotate 180&#xb0; in the cavity before the second HT can take place. Intermediate energies and reaction barriers for this mechanism are given in <xref ref-type="table" rid="T1">Table 1</xref>.</p>
</caption>
<graphic xlink:href="fctls-03-1213803-g003.tif"/>
</fig>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Free energies and barriers for the HT mechanism presented in <xref ref-type="fig" rid="F4">Figure 4</xref>, between n-butane and isobutene, propene, and 2-methylbut-2-ene as possible reactants (shown in blue). All energies and barriers calculated at T &#x3d; 400&#xb0;C and given in kJ/mol.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left"/>
<th align="left">Isobutene</th>
<th align="left">Propene</th>
<th align="left">2-Methylbut-2-ene</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">E1</td>
<td align="left">0</td>
<td align="left">0</td>
<td align="left">0</td>
</tr>
<tr>
<td align="left">P1</td>
<td align="left">48</td>
<td align="left">62</td>
<td align="left">57</td>
</tr>
<tr>
<td align="left">H1</td>
<td align="left">109</td>
<td align="left">108</td>
<td align="left">128</td>
</tr>
<tr>
<td align="left">TS1</td>
<td align="left">173</td>
<td align="left">197</td>
<td align="left">184</td>
</tr>
<tr>
<td align="left">H2</td>
<td align="left">172</td>
<td align="left">185</td>
<td align="left">158</td>
</tr>
<tr>
<td align="left">TS2</td>
<td align="left">203</td>
<td align="left">193</td>
<td align="left">205</td>
</tr>
<tr>
<td align="left">H3</td>
<td align="left">129</td>
<td align="left">128</td>
<td align="left">108</td>
</tr>
<tr>
<td align="left">E2</td>
<td align="left">52</td>
<td align="left">36</td>
<td align="left">50</td>
</tr>
<tr>
<td align="left">E1</td>
<td align="left">&#x2212;2</td>
<td align="left">&#x2212;12</td>
<td align="left">13</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>The reaction mechanisms are similar for all reactants: After co-adsorption of the olefin and n-butane within the zeolite pore (H1), protonation of the olefin with the proton from the acid site (TS1) yields the tert-butyl cation, co-adsorbed with n-butane (H2). The next reaction requires a rotation of the two co-adsorbed hydrocarbons by 180&#xb0;. We assume the associated rotational barriers to be negligible based on previous work (<xref ref-type="bibr" rid="B11">Fecik et al., 2018</xref>). After rotation, n-butane now faces the acid site. Subsequently, a concerted reaction takes place as n-butane gets deprotonated by the acid site, while simultaneously a hydride is transferred from n-butane toward the isobutyl cation to form isobutane and 2-butene (H3).</p>
<p>As in the case of the bimolecular mechanism, two hydrocarbons have to co-adsorb within the zeolite pore, which is entropically unfavorable. Using isobutene and n-butane in the gas phase as the reference, the highest barrier would be deprotonation to yield 2-butene and isobutane, being 203&#xa0;kJ/mol. This barrier is even higher than that of the bimolecular mechanism by 13&#xa0;kJ/mol and is somewhat too high for the reaction to take place at reasonable rates at reaction conditions typically employed.</p>
</sec>
<sec id="s3-5">
<title>3.4 Methyl transfer mechanism</title>
<p>As discussed previously, C<sub>3</sub> and C<sub>5</sub> hydrocarbons are by-products formed during n-butane isomerization, which is typically attributed to the bimolecular mechanism. An alternative possibility for their formation that we investigate here is the transfer of a methyl group (methyl transfer, MT) from an olefin to the acid site, forming a surface methoxy species (SMS), while reducing the olefin length by one CH<sub>2</sub> unit. For example, 2-butene is first protonated by the acid site, forming the 2-butyl cation, from which a CH<sub>3</sub> group can then transfer back to the acid site, forming propene and an SMS. A detailed free energy diagram for the MT reactions is shown in <xref ref-type="fig" rid="F4">Figure 4</xref>. Here, 2-butene adsorbed in H-SSZ-13 (E2) can undergo the aforesaid reaction to yield propene and an SMS (M1). The propene molecule can then desorb, leaving the SMS behind (M2). Now, a second 2-butene molecule can adsorb at the SMS (M3) and after being methylated yields 2-methylbut-2-ene and the empty acidic zeolite (M4). The 2-methylbut-2-ene molecule can desorb afterward and partake in the next reaction.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Free energy diagram of the formation of an SMS species and propene from 2-butene and successive methyl transfer (MT) to form 2-methylbut-2-ene. The rate-determining step is indicated to have a barrier of 227&#xa0;kJ/mol at T &#x3d; 400&#xb0;C, referenced to the empty zeolite and 2-butene in the gas phase.</p>
</caption>
<graphic xlink:href="fctls-03-1213803-g004.tif"/>
</fig>
<p>As evident from <xref ref-type="fig" rid="F4">Figure 4</xref>, the reaction between n-butene and an acid site yielding an SMS is accompanied by a free energy barrier of 227&#xa0;kJ/mol. After this first step, successive reactions that ultimately yield C<sub>3</sub> and C<sub>5</sub> alkanes all have somewhat lower barriers: 205&#xa0;kJ/mol for the C<sub>5</sub> pathway and 197&#xa0;kJ/mol for the C<sub>3</sub> pathway. The highest free energy barrier of the MT mechanism is 37&#xa0;kJ/mol higher than the highest barrier within the bimolecular mechanism, rendering C<sub>3</sub> and C<sub>5</sub> formation unlikely through this pathway in comparison. It is important to note, however, that the comparison between the two reaction pathways also greatly depends on the partial pressures and temperature since the MT reaction is monomolecular. This indicates that, in general, side product formation may happen more easily through one or the other of the mechanisms, depending on the reaction conditions.</p>
</sec>
</sec>
<sec id="s4">
<title>4 Conclusion and discussion</title>
<p>Mono- and bimolecular isomerization mechanisms from 2-butene to isobutene, as well as HTs to form isobutane, have been studied in the H-SSZ-13 (CHA) zeolite structure using periodic DFT calculations with high-level hybrid-functional (M06) corrections on cluster models. A slightly modified monomolecular mechanism via a 2-butyl cation is proposed for this zeolite. Additionally, an alternative mechanism to produce non-C<sub>4</sub> side products has been investigated, called methyl transfer mechanism, encompassing methyl transfers to and from the acid site of the catalyst.</p>
<p>The main results from our calculations are that the overall free energy barriers increase from the monomolecular (152&#xa0;kJ/mol) to the bimolecular (190&#xa0;kJ/mol) to the methyl transfer reaction mechanism (227&#xa0;kJ/mol) when referenced to olefins in the gas phase at 400&#xb0;C. Importantly, only the latter two can form C<sub>3</sub> and C<sub>5</sub> species that are observed experimentally. The reason for the high free energy barriers required for the bimolecular pathway lies in the large entropy penalty for the adsorption of two olefins within one pore of the zeolite, which is particularly important for the high temperatures (400&#xb0;C) considered herein. Lower temperatures will hence eventually favor the bimolecular mechanism. It is important to note here that we only model the co-catalyst species as 2-butene. It could, in principle, also be any other unsaturated hydrocarbon, aliphatic or aromatic, like, e.g., cyclic hydrocarbons, which might be produced during the reaction through coking of the catalyst (<xref ref-type="bibr" rid="B48">Wei et al., 2022</xref>). In such a case, because bulky hydrocarbons cannot leave the CHA cavity, an adsorbed olefin would be the correct energy reference state, thus lowering the overall free energy barrier.</p>
<p>Comparing our findings to those of recent work on this topic in the literature, <xref ref-type="bibr" rid="B51">Wulfers and Jentoft (2015</xref>) found that on H-mordenite at temperatures of 534&#x2013;583&#xa0;K, reaction orders of 1.0&#x2013;1.2 point toward a predominantly monomolecular isomerization. Adding small amounts of olefin to the reaction increased the formation of disproportionation products drastically, indicating that with the presence of olefinic species, the bimolecular mechanism becomes more dominant. We generally find similar qualitative trends, but point out that they used a different zeolite than the one in this study.</p>
<p>When discussing our theoretical results, we should highlight that while the enthalpy part of the free energy can be calculated at a reasonably high accuracy (&#x3c;10&#xa0;kJ/mol with M06/def2-TZVPP (<xref ref-type="bibr" rid="B12">Goncalves et al., 2019</xref>)), there is to date no realistic estimate to the errors originating from the harmonic oscillator approximation of entropic contributions, and therefore the calculation of accurate entropies remains a challenge (<xref ref-type="bibr" rid="B26">Kundu et al., 2016</xref>; <xref ref-type="bibr" rid="B43">Sprowl et al., 2016</xref>; <xref ref-type="bibr" rid="B19">J&#xf8;rgensen and Gr&#xf6;nbeck, 2017</xref>; <xref ref-type="bibr" rid="B27">Li et al., 2018</xref>; <xref ref-type="bibr" rid="B4">Amsler et al., 2021</xref>; <xref ref-type="bibr" rid="B44">Studt, 2021</xref>). DFT-based molecular dynamics (MD) simulations of isobutene adsorption in H-SSZ-13 have, for example, shown that the error in entropic contributions using the harmonic approximation between adsorption through the &#x3c0;-complex and carbenium ion is as high as 20&#xa0;kJ/mol at 400&#xb0;C (<xref ref-type="bibr" rid="B10">De Wispelaere et al., 2022</xref>). Similarly, Piccini et al. showed that the -T&#x2206;S term for the case of adsorption of ethanol in H-ZSM-5 is different by approximately 20&#x00a0;kJ/mol at 400&#x00a0;K when comparing the harmonic and anharmonic approximation (<xref ref-type="bibr" rid="B33">Piccini et al., 2018</xref>), which is similar to the findings of <xref ref-type="bibr" rid="B3">Alexopoulos et al. (2016</xref>). We thus speculate that the error of the entropic part (-T&#x2206;S) of the highest transition state of the bimolecular mechanism (B1-B2) is larger than those reported for small molecules such as ethanol. Given that the transition state of the bimolecular mechanism has two C<sub>4</sub> fragments, while the unimolecular only contains one, the error of the bimolecular mechanism should be higher, which should lower the reaction barrier for the bimolecular mechanism more, but whether this makes it comparable to or even lower than the unimolecular mechanism is difficult to estimate and will only be possible using extensive MD simulations in conjunction with thermodynamic integration (TI) (<xref ref-type="bibr" rid="B40">Rey et al., 2020</xref>; <xref ref-type="bibr" rid="B4">Amsler et al., 2021</xref>).</p>
<p>A simple estimate using the approximation that two-thirds of the translational entropy is retained in species in zeolites yields free energy barriers of 95&#x00a0;kJ/mol for the monomolecular and 80&#x00a0;kJ/mol for the bimolecular mechanism. These barriers seem to be rather low, suggesting that less than two-thirds of the translational entropy is lost, as the transition states are more tightly bound than adsorbed species.</p>
<p>Overall, our computational results shed light on the energetics of the monomolecular and bimolecular mechanisms for butane isomerization in H-SSZ-13. Our study shows how small amounts of olefins can catalyze n-butane isomerization through the HT mechanism. We also studied an MT mechanism as a third competing mechanism, through which non-C<sub>4</sub> hydrocarbons can also be formed. We found, however, that this mechanism is not likely to play a significant role. For an overall assessment of which reaction pathways are preferred, however, one would also need to establish kinetic models to evaluate the influences of temperature, partial pressures, and residence times and to include possible effects of diffusion limitations.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s5">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s10">Supplementary Material</xref>; further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s6">
<title>Author contributions</title>
<p>All authors listed have made a substantial, direct, and intellectual contribution to the work and approved it for publication.</p>
</sec>
<sec id="s7">
<title>Funding</title>
<p>This study was conducted as part of the Consortium of Metal Nanocatalysis funded by TotalEnergies OneTech Belgium. The authors acknowledge support by the KIT-Publication Fund of the Karlsruhe Institute of Technology. Support from TotalEnergies through Houston HPC computational resources is greatly acknowledged.</p>
</sec>
<sec sec-type="COI-statement" id="s8">
<title>Conflict of interest</title>
<p>The authors declare that this study received funding from TotalEnergies OneTech Belgium. The funder had the following involvement in the study: Discussion and interpretation of data, as well as the decision to submit and support in writing the publication.</p>
</sec>
<sec sec-type="disclaimer" id="s9">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors, and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s10">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fctls.2023.1213803/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fctls.2023.1213803/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet1.ZIP" id="SM1" mimetype="application/ZIP" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="DataSheet1.pdf" id="SM2" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Adeeva</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Sachtler</surname>
<given-names>W. M.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>Mechanism of butane isomerization over industrial isomerization catalysts</article-title>. <source>Appl. Catal. A</source> <volume>163</volume> (<issue>1-2</issue>), <fpage>237</fpage>&#x2013;<lpage>243</lpage>. <pub-id pub-id-type="doi">10.1016/s0926-860x(97)00149-x</pub-id>
</citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ahlrichs</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Bar</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Haser</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Horn</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Kolmel</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>1989</year>). <article-title>Electronic-structure calculations on workstation computers - the program system Turbomole</article-title>. <source>Chem. Phys. Lett.</source> <volume>162</volume> (<issue>3</issue>), <fpage>165</fpage>&#x2013;<lpage>169</lpage>. <pub-id pub-id-type="doi">10.1016/0009-2614(89)85118-8</pub-id>
</citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Alexopoulos</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Lee</surname>
<given-names>M.-S.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zhi</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Reyniers</surname>
<given-names>M.-F.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Anharmonicity and confinement in zeolites: Structure, spectroscopy, and adsorption free energy of ethanol in H-ZSM-5</article-title>. <source>J. Phys. Chem. C</source> <volume>120</volume> (<issue>13</issue>), <fpage>7172</fpage>&#x2013;<lpage>7182</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jpcc.6b00923</pub-id>
</citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Amsler</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Plessow</surname>
<given-names>P. N.</given-names>
</name>
<name>
<surname>Studt</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Bu&#x10d;ko</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Anharmonic correction to adsorption free energy from DFT-based MD using thermodynamic integration</article-title>. <source>J. Chem. Theory Comput.</source> <volume>17</volume> (<issue>2</issue>), <fpage>1155</fpage>&#x2013;<lpage>1169</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jctc.0c01022</pub-id>
</citation>
</ref>
<ref id="B5">
<citation citation-type="book">
<person-group person-group-type="author">
<name>
<surname>Breck</surname>
<given-names>D. W.</given-names>
</name>
<name>
<surname>Breck</surname>
<given-names>D. W.</given-names>
</name>
</person-group> (<year>1973</year>). <source>Zeolite molecular sieves: Structure, chemistry, and use</source>. <publisher-loc>Hoboken, USA</publisher-loc>: <publisher-name>Wiley</publisher-name>.</citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Brogaard</surname>
<given-names>R. Y.</given-names>
</name>
<name>
<surname>Henry</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Schuurman</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Medford</surname>
<given-names>A. J.</given-names>
</name>
<name>
<surname>Moses</surname>
<given-names>P. G.</given-names>
</name>
<name>
<surname>Beato</surname>
<given-names>P.</given-names>
</name>
<etal/>
</person-group> (<year>2014</year>). <article-title>Methanol-to-hydrocarbons conversion: The alkene methylation pathway</article-title>. <source>J. Catal.</source> <volume>314</volume>, <fpage>159</fpage>&#x2013;<lpage>169</lpage>. <pub-id pub-id-type="doi">10.1016/j.jcat.2014.04.006</pub-id>
</citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Brogaard</surname>
<given-names>R. Y.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>C.-M.</given-names>
</name>
<name>
<surname>Studt</surname>
<given-names>F.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Methanol&#x2013;alkene reactions in zeotype acid catalysts: Insights from a descriptor-based approach and microkinetic modeling</article-title>. <source>ACS Catal.</source> <volume>4</volume> (<issue>12</issue>), <fpage>4504</fpage>&#x2013;<lpage>4509</lpage>. <pub-id pub-id-type="doi">10.1021/cs5014267</pub-id>
</citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bearez</surname>
<given-names>C. F. C.</given-names>
</name>
<name>
<surname>Guisnet</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>1983</year>). <article-title>Mechanism of butane tranformation on H mordenite I, kinetic study</article-title>. <source>React. Kinet. Catal. Lett.</source> <volume>22</volume>, <fpage>405</fpage>&#x2013;<lpage>409</lpage>. <pub-id pub-id-type="doi">10.1007/bf02066212</pub-id>
</citation>
</ref>
<ref id="B9">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dauenhauer</surname>
<given-names>P. J.</given-names>
</name>
<name>
<surname>Abdelrahman</surname>
<given-names>O. A.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>A universal descriptor for the entropy of adsorbed molecules in confined spaces</article-title>. <source>ACS Cent. Sci.</source> <volume>4</volume> (<issue>9</issue>), <fpage>1235</fpage>&#x2013;<lpage>1243</lpage>. <pub-id pub-id-type="doi">10.1021/acscentsci.8b00419</pub-id>
</citation>
</ref>
<ref id="B10">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>De Wispelaere</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Plessow</surname>
<given-names>P. N.</given-names>
</name>
<name>
<surname>Studt</surname>
<given-names>F.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Toward computing accurate free energies in heterogeneous catalysis: A case study for adsorbed isobutene in H-ZSM-5</article-title>. <source>ACS Phys. Chem. Au</source> <volume>2</volume> (<issue>5</issue>), <fpage>399</fpage>&#x2013;<lpage>406</lpage>. <pub-id pub-id-type="doi">10.1021/acsphyschemau.2c00020</pub-id>
</citation>
</ref>
<ref id="B11">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fecik</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Plessow</surname>
<given-names>P. N.</given-names>
</name>
<name>
<surname>Studt</surname>
<given-names>F.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Simple scheme to predict transition-state energies of dehydration reactions in zeolites with relevance to biomass conversion</article-title>. <source>J. Phys. Chem. C</source> <volume>122</volume>, <fpage>23062</fpage>&#x2013;<lpage>23067</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jpcc.8b07659</pub-id>
</citation>
</ref>
<ref id="B12">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Goncalves</surname>
<given-names>T. J.</given-names>
</name>
<name>
<surname>Plessow</surname>
<given-names>P. N.</given-names>
</name>
<name>
<surname>Studt</surname>
<given-names>F.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>On the accuracy of density functional theory in zeolite catalysis</article-title>. <source>ChemCatChem</source> <volume>11</volume> (<issue>17</issue>), <fpage>4368</fpage>&#x2013;<lpage>4376</lpage>. <pub-id pub-id-type="doi">10.1002/cctc.201900791</pub-id>
</citation>
</ref>
<ref id="B13">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Grimme</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Antony</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Ehrlich</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Krieg</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>A consistent and accurate <italic>ab initio</italic> parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu</article-title>. <source>J. Chem. Phys.</source> <volume>132</volume> (<issue>15</issue>), <fpage>154104</fpage>. <pub-id pub-id-type="doi">10.1063/1.3382344</pub-id>
</citation>
</ref>
<ref id="B14">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>He</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Sun</surname>
<given-names>X.-L.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>B.-H.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>Y.-G.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Density functional theory studies on the skeletal isomerization of 1-butene catalyzed by HZSM-23 and HZSM-48 zeolites</article-title>. <source>RSC Adv.</source> <volume>7</volume> (<issue>15</issue>), <fpage>9251</fpage>&#x2013;<lpage>9257</lpage>. <pub-id pub-id-type="doi">10.1039/c6ra26894c</pub-id>
</citation>
</ref>
<ref id="B15">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hjorth Larsen</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Jorgen Mortensen</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Blomqvist</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Castelli</surname>
<given-names>I. E.</given-names>
</name>
<name>
<surname>Christensen</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Dulak</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>The atomic simulation environment-a Python library for working with atoms</article-title>. <source>J. Phys. Condens. Matter</source> <volume>29</volume> (<issue>27</issue>), <fpage>273002</fpage>. <pub-id pub-id-type="doi">10.1088/1361-648x/aa680e</pub-id>
</citation>
</ref>
<ref id="B16">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hou&#x17e;vi&#x10d;ka</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Ponec</surname>
<given-names>V.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>Skeletal isomerization of butene: On the role of the bimolecular mechanism</article-title>. <source>Ind. Eng. Chem. Res.</source> <volume>36</volume> (<issue>5</issue>), <fpage>1424</fpage>&#x2013;<lpage>1430</lpage>. <pub-id pub-id-type="doi">10.1021/ie960588b</pub-id>
</citation>
</ref>
<ref id="B17">
<citation citation-type="web">
<collab>Isobutane market to reach USD</collab> (<year>2021</year>). <article-title>Isobutane market to reach USD 34.00 billion by 2026, reports and data</article-title>. <comment>Available at: <ext-link ext-link-type="uri" xlink:href="https://www.globenewswire.com/news-release/2019/03/21/1758764/0/en/Isobutane-Market-To-Reach-USD-34%E2%80%9300-Billion-By-2026-Reports-And-Data.html">https://www.globenewswire.com/news-release/2019/03/21/1758764/0/en/Isobutane-Market-To-Reach-USD-34%E2%80%9300-Billion-By-2026-Reports-And-Data.html</ext-link>
</comment>.</citation>
</ref>
<ref id="B18">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Janda</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Vlaisavljevich</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Lin</surname>
<given-names>L.-C.</given-names>
</name>
<name>
<surname>Smit</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Bell</surname>
<given-names>A. T.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Effects of zeolite structural confinement on adsorption thermodynamics and reaction kinetics for monomolecular cracking and dehydrogenation of n-butane</article-title>. <source>J. Am. Chem. Soc.</source> <volume>138</volume> (<issue>14</issue>), <fpage>4739</fpage>&#x2013;<lpage>4756</lpage>. <pub-id pub-id-type="doi">10.1021/jacs.5b11355</pub-id>
</citation>
</ref>
<ref id="B19">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>J&#xf8;rgensen</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Gr&#xf6;nbeck</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Adsorbate entropies with complete potential energy sampling in microkinetic modeling</article-title>. <source>J. Phys. Chem. C</source> <volume>121</volume> (<issue>13</issue>), <fpage>7199</fpage>&#x2013;<lpage>7207</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jpcc.6b11487</pub-id>
</citation>
</ref>
<ref id="B20">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kangas</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Kumar</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Harlin</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Salmi</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Murzin</surname>
<given-names>D. Y.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Skeletal isomerization of butene in fixed beds. 1. Experimental investigation and Structure&#x2212;Performance effects</article-title>. <source>Ind. Eng. Chem. Res.</source> <volume>47</volume> (<issue>15</issue>), <fpage>5402</fpage>&#x2013;<lpage>5412</lpage>. <pub-id pub-id-type="doi">10.1021/ie800061q</pub-id>
</citation>
</ref>
<ref id="B21">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kresse</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Furthm&#xfc;ller</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>1996</year>), <article-title>Efficiency of <italic>ab-initio</italic> total energy calculations for metals and semiconductors using a plane-wave basis set</article-title>. <source>Comput. Mater. Sci.</source> <volume>6</volume> (<issue>1</issue>), <fpage>15</fpage>&#x2013;<lpage>50</lpage>. <pub-id pub-id-type="doi">10.1016/0927-0256(96)00008-0</pub-id>
</citation>
</ref>
<ref id="B22">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kresse</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Furthm&#xfc;ller</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>1996</year>). <article-title>Efficient iterative schemes for <italic>ab-initio</italic> total-energy calculations using a plane-wave basis set</article-title>. <source>Phys. Rev. B</source> <volume>54</volume> (<issue>16</issue>), <fpage>11169</fpage>&#x2013;<lpage>11186</lpage>. <pub-id pub-id-type="doi">10.1103/physrevb.54.11169</pub-id>
</citation>
</ref>
<ref id="B23">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kresse</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Hafner</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>1993</year>). <article-title>
<italic>Ab initio</italic> molecular dynamics for liquid metals</article-title>. <source>Phys. Rev. B</source> <volume>47</volume> (<issue>1</issue>), <fpage>558</fpage>&#x2013;<lpage>561</lpage>. <pub-id pub-id-type="doi">10.1103/physrevb.47.558</pub-id>
</citation>
</ref>
<ref id="B24">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kresse</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Hafner</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>1994</year>). <article-title>
<italic>Ab initio</italic> molecular-dynamics simulation of the liquid-metal&#x2013;amorphous-semiconductor transition in germanium</article-title>. <source>Phys. Rev. B</source> <volume>49</volume> (<issue>20</issue>), <fpage>14251</fpage>&#x2013;<lpage>14269</lpage>. <pub-id pub-id-type="doi">10.1103/physrevb.49.14251</pub-id>
</citation>
</ref>
<ref id="B25">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kresse</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Joubert</surname>
<given-names>D.</given-names>
</name>
</person-group> (<year>1999</year>). <article-title>From ultrasoft pseudopotentials to the projector augmented-wave method</article-title>. <source>Phys. Rev. B</source> <volume>59</volume> (<issue>3</issue>), <fpage>1758</fpage>&#x2013;<lpage>1775</lpage>. <pub-id pub-id-type="doi">10.1103/physrevb.59.1758</pub-id>
</citation>
</ref>
<ref id="B26">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kundu</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Piccini</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Sillar</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Sauer</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>
<italic>Ab initio</italic> prediction of adsorption isotherms for small molecules in metal-organic frameworks</article-title>. <source>J. Am. Chem. Soc.</source> <volume>138</volume> (<issue>42</issue>), <fpage>14047</fpage>&#x2013;<lpage>14056</lpage>. <pub-id pub-id-type="doi">10.1021/jacs.6b08646</pub-id>
</citation>
</ref>
<ref id="B27">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Paolucci</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Schneider</surname>
<given-names>W. F.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Zeolite adsorption free energies from <italic>ab initio</italic> potentials of mean force</article-title>. <source>J. Chem. Theory Comput.</source> <volume>14</volume> (<issue>2</issue>), <fpage>929</fpage>&#x2013;<lpage>938</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jctc.7b00716</pub-id>
</citation>
</ref>
<ref id="B28">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Luzgin</surname>
<given-names>M. V.</given-names>
</name>
<name>
<surname>Stepanov</surname>
<given-names>A. G.</given-names>
</name>
<name>
<surname>Arzumanov</surname>
<given-names>S. S.</given-names>
</name>
<name>
<surname>Rogov</surname>
<given-names>V. A.</given-names>
</name>
<name>
<surname>Parmon</surname>
<given-names>V. N.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>W.</given-names>
</name>
<etal/>
</person-group> (<year>2005</year>). <article-title>Mechanism studies of the conversion of 13C-labeled n-butane on zeolite H-ZSM-5 by using 13C magic angle spinning NMR spectroscopy and GC-MS analysis</article-title>. <source>Chemistry</source> <volume>12</volume> (<issue>2</issue>), <fpage>457</fpage>&#x2013;<lpage>465</lpage>. <pub-id pub-id-type="doi">10.1002/chem.200500382</pub-id>
</citation>
</ref>
<ref id="B29">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ono</surname>
<given-names>Y.</given-names>
</name>
</person-group> (<year>2003</year>). <article-title>A survey of the mechanism in catalytic isomerization of alkanes</article-title>. <source>Catal. Today</source> <volume>81</volume>, <fpage>3</fpage>&#x2013;<lpage>16</lpage>. <pub-id pub-id-type="doi">10.1016/s0920-5861(03)00097-x</pub-id>
</citation>
</ref>
<ref id="B30">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Perdew</surname>
<given-names>J. P.</given-names>
</name>
<name>
<surname>Ruzsinszky</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Csonka</surname>
<given-names>G. b. I.</given-names>
</name>
<name>
<surname>Vydrov</surname>
<given-names>O. A.</given-names>
</name>
<name>
<surname>Scuseria</surname>
<given-names>G. E.</given-names>
</name>
<name>
<surname>Constantin</surname>
<given-names>L. A.</given-names>
</name>
<etal/>
</person-group> (<year>2008</year>). <article-title>Restoring the density-gradient expansion for exchange in solids and surfaces</article-title>. <source>Phys. Rev. Lett.</source> <volume>100</volume> (<issue>13</issue>), <fpage>136406</fpage>. <pub-id pub-id-type="doi">10.1103/physrevlett.100.136406</pub-id>
</citation>
</ref>
<ref id="B31">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Perdew</surname>
<given-names>J. P.</given-names>
</name>
<name>
<surname>Burke</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Ernzerhof</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>Generalized gradient approximation made simple</article-title>. <source>Phys. Rev. Lett.</source> <volume>78</volume>, <fpage>1396</fpage>&#x2013;<lpage>1396</lpage>. <pub-id pub-id-type="doi">10.1103/physrevlett.78.1396</pub-id>
</citation>
</ref>
<ref id="B32">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Perdew</surname>
<given-names>J. P.</given-names>
</name>
<name>
<surname>Ruzsinszky</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Csonka</surname>
<given-names>G. I.</given-names>
</name>
<name>
<surname>Vydrov</surname>
<given-names>O. A.</given-names>
</name>
<name>
<surname>Scuseria</surname>
<given-names>G. E.</given-names>
</name>
<name>
<surname>Constantin</surname>
<given-names>L. A.</given-names>
</name>
<etal/>
</person-group> (<year>2009</year>). <article-title>Erratum: Restoring the density-gradient expansion for exchange in solids and surfaces</article-title>. <source>Phys. Rev. Lett.</source> <volume>102</volume> (<issue>3</issue>), <fpage>039902</fpage>. <pub-id pub-id-type="doi">10.1103/physrevlett.102.039902</pub-id>
</citation>
</ref>
<ref id="B33">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Piccini</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Alessio</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Sauer</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>
<italic>Ab initio</italic> study of methanol and ethanol adsorption on Br&#x00F8;nsted sites in zeolite H-MFI</article-title>. <source>Phys. Chem. Chem. Phys.</source> <volume>20</volume> (<issue>30</issue>), <fpage>19964</fpage>&#x2013;<lpage>19970</lpage>. <pub-id pub-id-type="doi">10.1039/c8cp03632b</pub-id>
</citation>
</ref>
<ref id="B34">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Plessow</surname>
<given-names>P. N.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Efficient transition state optimization of periodic structures through automated relaxed potential energy surface scans</article-title>. <source>J. Chem. Theory Comput.</source> <volume>14</volume> (<issue>2</issue>), <fpage>981</fpage>&#x2013;<lpage>990</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jctc.7b01070</pub-id>
</citation>
</ref>
<ref id="B35">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Plessow</surname>
<given-names>P. N.</given-names>
</name>
<name>
<surname>Studt</surname>
<given-names>F.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Correction: Olefin methylation and cracking reactions in H-SSZ-13 investigated with <italic>ab initio</italic> and DFT calculations</article-title>. <source>Catal. Sci. Technol.</source> <volume>10</volume> (<issue>19</issue>), <fpage>6738</fpage>&#x2013;<lpage>6739</lpage>. <pub-id pub-id-type="doi">10.1039/d0cy90088e</pub-id>
</citation>
</ref>
<ref id="B36">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Plessow</surname>
<given-names>P. N.</given-names>
</name>
<name>
<surname>Studt</surname>
<given-names>F.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Olefin methylation and cracking reactions in H-SSZ-13 investigated with <italic>ab initio</italic> and DFT calculations</article-title>. <source>Catal. Sci. Technol.</source> <volume>8</volume> (<issue>17</issue>), <fpage>4420</fpage>&#x2013;<lpage>4429</lpage>. <pub-id pub-id-type="doi">10.1039/c8cy01194j</pub-id>
</citation>
</ref>
<ref id="B37">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Plessow</surname>
<given-names>P. N.</given-names>
</name>
<name>
<surname>Studt</surname>
<given-names>F.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Unraveling the mechanism of the initiation reaction of the methanol to olefins process using <italic>ab initio</italic> and DFT calculations</article-title>. <source>ACS Catal.</source> <volume>7</volume> (<issue>11</issue>), <fpage>7987</fpage>&#x2013;<lpage>7994</lpage>. <pub-id pub-id-type="doi">10.1021/acscatal.7b03114</pub-id>
</citation>
</ref>
<ref id="B38">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Potter</surname>
<given-names>M. E.</given-names>
</name>
<name>
<surname>Le Brocq</surname>
<given-names>J. J. M.</given-names>
</name>
<name>
<surname>Oakley</surname>
<given-names>A. E.</given-names>
</name>
<name>
<surname>McShane</surname>
<given-names>E. B.</given-names>
</name>
<name>
<surname>Vandegehuchte</surname>
<given-names>B. D.</given-names>
</name>
<name>
<surname>Raja</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Butane isomerization as a diagnostic tool in the rational design of solid acid catalysts</article-title>. <source>Catalysts</source> <volume>10</volume> (<issue>9</issue>), <fpage>1099</fpage>. <pub-id pub-id-type="doi">10.3390/catal10091099</pub-id>
</citation>
</ref>
<ref id="B39">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Asuquo</surname>
<given-names>R. A.</given-names>
</name>
<name>
<surname>Lercher</surname>
<given-names>J. A.</given-names>
</name>
</person-group> (<year>1995</year>). <article-title>n-Butane isomerization over acidic mordenite</article-title>. <source>J. Catal.</source> <volume>155</volume>, <fpage>376</fpage>&#x2013;<lpage>382</lpage>. <pub-id pub-id-type="doi">10.1006/jcat.1995.1219</pub-id>
</citation>
</ref>
<ref id="B40">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rey</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Bignaud</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Raybaud</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Bucko</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Chizallet</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Dynamic features of transition states for beta-scission reactions of alkenes over acid zeolites revealed by AIMD simulations</article-title>. <source>Angew. Chem. Int. Ed. Engl.</source> <volume>59</volume> (<issue>43</issue>), <fpage>19100</fpage>&#x2013;<lpage>19104</lpage>. <pub-id pub-id-type="doi">10.1002/ange.202006065</pub-id>
</citation>
</ref>
<ref id="B41">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rey</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Gomez</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Raybaud</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Chizallet</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Bucko</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>On the origin of the difference between type A and type B skeletal isomerization of alkenes catalyzed by zeolites: The crucial input of <italic>ab initio</italic> molecular dynamics</article-title>. <source>J. Catal.</source> <volume>373</volume>, <fpage>361</fpage>&#x2013;<lpage>373</lpage>. <pub-id pub-id-type="doi">10.1016/j.jcat.2019.04.014</pub-id>
</citation>
</ref>
<ref id="B42">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rey</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Raybaud</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Chizallet</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Bu&#x10d;ko</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Competition of secondary versus tertiary carbenium routes for the type B isomerization of alkenes over acid zeolites quantified by ab initio molecular dynamics simulations</article-title>. <source>ACS Catal.</source> <volume>9</volume> (<issue>11</issue>), <fpage>9813</fpage>&#x2013;<lpage>9828</lpage>. <pub-id pub-id-type="doi">10.1021/acscatal.9b02856</pub-id>
</citation>
</ref>
<ref id="B43">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sprowl</surname>
<given-names>L. H.</given-names>
</name>
<name>
<surname>Campbell</surname>
<given-names>C. T.</given-names>
</name>
<name>
<surname>&#xc1;rnad&#xf3;ttir</surname>
<given-names>L.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Hindered translator and hindered rotor models for adsorbates: Partition functions and entropies</article-title>. <source>J. Phys. Chem. C</source> <volume>120</volume> (<issue>18</issue>), <fpage>9719</fpage>&#x2013;<lpage>9731</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jpcc.5b11616</pub-id>
</citation>
</ref>
<ref id="B44">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Studt</surname>
<given-names>F.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Grand challenges in computational catalysis</article-title>. <source>Front. Catal.</source> <volume>1</volume>. <pub-id pub-id-type="doi">10.3389/fctls.2021.658965</pub-id>
</citation>
</ref>
<ref id="B45">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tuma</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Sauer</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2005</year>). <article-title>Protonated isobutene in zeolites: tert-butyl cation or alkoxide?</article-title>. <source>Angew. Chem. Int. Ed. Engl.</source> <volume>44</volume> (<issue>30</issue>), <fpage>4769</fpage>&#x2013;<lpage>4771</lpage>. <pub-id pub-id-type="doi">10.1002/anie.200501002</pub-id>
</citation>
</ref>
<ref id="B46">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Von Arnim</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Ahlrichs</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>1998</year>). <article-title>Performance of parallel TURBOMOLE for density functional calculations</article-title>. <source>J. Comput. Chem.</source> <volume>19</volume> (<issue>15</issue>), <fpage>1746</fpage>&#x2013;<lpage>1757</lpage>. <pub-id pub-id-type="doi">10.1002/(sici)1096-987x(19981130)19:15&#x3c;1746:aid-jcc7&#x3e;3.0.co;2-n</pub-id>
</citation>
</ref>
<ref id="B47">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Comparative study of n-butane isomerization over SO42&#x2212;/Al2O3-ZrO2 and HZSM-5 zeolites at low reaction temperatures</article-title>. <source>Appl. Catal. A</source> <volume>550</volume>, <fpage>98</fpage>&#x2013;<lpage>104</lpage>. <pub-id pub-id-type="doi">10.1016/j.apcata.2017.11.006</pub-id>
</citation>
</ref>
<ref id="B48">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wei</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zheng</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Wei</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Bai</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zhao</surname>
<given-names>L.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Insights into the reaction of 1-butene catalytic cracking in HZSM-5 from first-principles: Reaction mechanism and microkinetics research</article-title>. <source>Ind. Eng. Chem. Res.</source> <volume>61</volume> (<issue>16</issue>), <fpage>5429</fpage>&#x2013;<lpage>5441</lpage>. <pub-id pub-id-type="doi">10.1021/acs.iecr.2c00045</pub-id>
</citation>
</ref>
<ref id="B49">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Weigend</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Ahlrichs</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2005</year>). <article-title>Balanced basis sets of split valence, triple zeta valence and quadruple zeta valence quality for H to Rn: Design and assessment of accuracy</article-title>. <source>Phys. Chem. Chem. Phys.</source> <volume>7</volume> (<issue>18</issue>), <fpage>3297</fpage>&#x2013;<lpage>3305</lpage>. <pub-id pub-id-type="doi">10.1039/b508541a</pub-id>
</citation>
</ref>
<ref id="B50">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Weigend</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Furche</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Ahlrichs</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2003</year>). <article-title>Gaussian basis sets of quadruple zeta valence quality for atoms H-Kr</article-title>. <source>J. Chem. Phys.</source> <volume>119</volume> (<issue>24</issue>), <fpage>12753</fpage>&#x2013;<lpage>12762</lpage>. <pub-id pub-id-type="doi">10.1063/1.1627293</pub-id>
</citation>
</ref>
<ref id="B51">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wulfers</surname>
<given-names>M. J.</given-names>
</name>
<name>
<surname>Jentoft</surname>
<given-names>F. C.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Mechanism of n-butane skeletal isomerization on H-mordenite and Pt/H-mordenite</article-title>. <source>J. Catal.</source> <volume>330</volume>, <fpage>507</fpage>&#x2013;<lpage>519</lpage>. <pub-id pub-id-type="doi">10.1016/j.jcat.2014.12.035</pub-id>
</citation>
</ref>
<ref id="B52">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhao</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Truhlar</surname>
<given-names>D. G.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: Two new functionals and systematic testing of four M06-class functionals and 12 other functionals</article-title>. <source>Theor. Chem. Acc.</source> <volume>120</volume> (<issue>1-3</issue>), <fpage>215</fpage>&#x2013;<lpage>241</lpage>. <pub-id pub-id-type="doi">10.1007/s00214-007-0310-x</pub-id>
</citation>
</ref>
</ref-list>
</back>
</article>