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<journal-id journal-id-type="publisher-id">Front. Bioeng. Biotechnol.</journal-id>
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<journal-title>Frontiers in Bioengineering and Biotechnology</journal-title>
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<issn pub-type="epub">2296-4185</issn>
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<article-id pub-id-type="publisher-id">1789453</article-id>
<article-id pub-id-type="doi">10.3389/fbioe.2026.1789453</article-id>
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<article-categories>
<subj-group subj-group-type="heading">
<subject>Original Research</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>SPR biosensor with a graphene overlayer for carcinoma detection</article-title>
<alt-title alt-title-type="left-running-head">Tene et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fbioe.2026.1789453">10.3389/fbioe.2026.1789453</ext-link>
</alt-title>
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<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Tene</surname>
<given-names>Talia</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
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<surname>Tixi Gallegos</surname>
<given-names>Katherine</given-names>
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<sup>2</sup>
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<contrib contrib-type="author">
<name>
<surname>Mendoza Salazar</surname>
<given-names>Mar&#xed;a Jos&#xe9;</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
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<surname>Gahramanli</surname>
<given-names>Lala</given-names>
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<sup>4</sup>
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<contrib contrib-type="author">
<name>
<surname>Khankishiyeva</surname>
<given-names>Rana</given-names>
</name>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
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<xref ref-type="aff" rid="aff7">
<sup>7</sup>
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<contrib contrib-type="author" corresp="yes">
<name>
<surname>Vacacela Gomez</surname>
<given-names>Cristian</given-names>
</name>
<xref ref-type="aff" rid="aff8">
<sup>8</sup>
</xref>
<xref ref-type="aff" rid="aff9">
<sup>9</sup>
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<aff id="aff1">
<label>1</label>
<institution>Department of Chemistry, Universidad T&#xe9;cnica Particular de Loja</institution>, <city>Loja</city>, <country country="EC">Ecuador</country>
</aff>
<aff id="aff2">
<label>2</label>
<institution>Carrera de Ingenier&#xed;a Qu&#xed;mica, Facultad de Ciencias, Escuela Superior Polit&#xe9;cnica de Chimborazo (ESPOCH)</institution>, <city>Riobamba</city>, <country country="EC">Ecuador</country>
</aff>
<aff id="aff3">
<label>3</label>
<institution>Facultad de Ciencias, Grupo de Investigaci&#xf3;n CIDED, Escuela Superior Polit&#xe9;cnica de Chimborazo (ESPOCH)</institution>, <city>Riobamba</city>, <country country="EC">Ecuador</country>
</aff>
<aff id="aff4">
<label>4</label>
<institution>Nano Research Laboratory, Center of Excellent, Baku State University</institution>, <city>Baku</city>, <country country="AZ">Azerbaijan</country>
</aff>
<aff id="aff5">
<label>5</label>
<institution>Faculty of Physics, Chemical Physics of Nanomaterials, Baku State University</institution>, <city>Baku</city>, <country country="AZ">Azerbaijan</country>
</aff>
<aff id="aff6">
<label>6</label>
<institution>Institute of Radiation Problems, Ministry of Science and Education of the Republic of Azerbaijan</institution>, <city>Baku</city>, <country country="AZ">Azerbaijan</country>
</aff>
<aff id="aff7">
<label>7</label>
<institution>Department of Physics and Chemistry, Azerbaijan University of Architecture and Construction</institution>, <city>Baku</city>, <country country="AZ">Azerbaijan</country>
</aff>
<aff id="aff8">
<label>8</label>
<institution>Department of Physics, University of Calabria</institution>, <city>Rende</city>, <country country="IT">Italy</country>
</aff>
<aff id="aff9">
<label>9</label>
<institution>Universidad Ecotec</institution>, <city>Samborond&#xf3;n</city>, <country country="EC">Ecuador</country>
</aff>
<author-notes>
<corresp id="c001">
<label>&#x2a;</label>Correspondence: Talia Tene, <email xlink:href="mailto:tbtene@utpl.edu.ec">tbtene@utpl.edu.ec</email>; Cristian Vacacela Gomez, <email xlink:href="mailto:cvacacela@ecotec.edu.ec">cvacacela@ecotec.edu.ec</email>
</corresp>
</author-notes>
<pub-date publication-format="electronic" date-type="pub" iso-8601-date="2026-02-23">
<day>23</day>
<month>02</month>
<year>2026</year>
</pub-date>
<pub-date publication-format="electronic" date-type="collection">
<year>2026</year>
</pub-date>
<volume>14</volume>
<elocation-id>1789453</elocation-id>
<history>
<date date-type="received">
<day>16</day>
<month>01</month>
<year>2026</year>
</date>
<date date-type="rev-recd">
<day>06</day>
<month>02</month>
<year>2026</year>
</date>
<date date-type="accepted">
<day>06</day>
<month>02</month>
<year>2026</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2026 Tene, Tixi Gallegos, Mendoza Salazar, Gahramanli, Khankishiyeva and Vacacela Gomez.</copyright-statement>
<copyright-year>2026</copyright-year>
<copyright-holder>Tene, Tixi Gallegos, Mendoza Salazar, Gahramanli, Khankishiyeva and Vacacela Gomez</copyright-holder>
<license>
<ali:license_ref start_date="2026-02-23">https://creativecommons.org/licenses/by/4.0/</ali:license_ref>
<license-p>This is an open-access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License (CC BY)</ext-link>. The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</license-p>
</license>
</permissions>
<abstract>
<p>Early carcinoma detection benefits from label-free, high-sensitivity surface plasmon resonance (SPR) biosensors. We computationally evaluated multilayer SPR architectures based on CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/Graphene using the transfer-matrix method at 633&#xa0;nm. Across 1&#x2013;5&#xa0;ng/mL, we analyzed reflectance, resonance-angle shifts, and near-field profiles, and derived sensitivity, detection accuracy (DA), figure of merit, and the limit of detection (LOD). The CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/Graphene stack yielded the best performance, achieving 481.29&#xb0;/RIU sensitivity and DA &#x3d; 0.80, with pronounced evanescent-field confinement at the sensing interface. Under identical modeling conditions, this graphene-integrated configuration outperformed TiO<sub>2</sub>-only and Cu-only baselines within the studied range. These results indicate a cost-effective platform for sensitive carcinoma biomarker detection. Calculation details for LOD and other metrics are provided in Methods, and practical considerations for experimental realization are discussed.</p>
</abstract>
<kwd-group>
<kwd>biosensor</kwd>
<kwd>carcinoma</kwd>
<kwd>copper</kwd>
<kwd>graphene</kwd>
<kwd>sensitivity</kwd>
<kwd>SPR</kwd>
<kwd>titanium dioxide</kwd>
</kwd-group>
<funding-group>
<award-group id="gs1">
<funding-source id="sp1">
<institution-wrap>
<institution>Universidad T&#xe9;cnica Particular de Loja</institution>
<institution-id institution-id-type="doi" vocab="open-funder-registry" vocab-identifier="10.13039/open_funder_registry">10.13039/100019349</institution-id>
</institution-wrap>
</funding-source>
</award-group>
<funding-statement>The author(s) declared that financial support was received for this work and/or its publication. This work was funded and supported by Universidad T&#xe9;cnica Particular de Loja under grant No.: POA_VIN-54.</funding-statement>
</funding-group>
<counts>
<fig-count count="12"/>
<table-count count="0"/>
<equation-count count="6"/>
<ref-count count="50"/>
<page-count count="15"/>
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<custom-meta-group>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Biosensors and Biomolecular Electronics</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<label>1</label>
<title>Introduction</title>
<p>Carcinomas constitute a major share of the global cancer burden, reinforcing the need for early detection at clinically relevant biomarker levels (<xref ref-type="bibr" rid="B43">World Health Organizat ion, 2023</xref>; <xref ref-type="bibr" rid="B4">Bray et al., 2024</xref>; <xref ref-type="bibr" rid="B37">Singal et al., 2023</xref>). In practice, the challenge is to identify tumor-associated targets at very low concentrations (often ng&#xb7;mL<sup>&#x2212;1</sup>) in complex biofluids while minimizing sample preparation and time to result (<xref ref-type="bibr" rid="B41">Trap&#xe9; et al., 2011</xref>). These requirements motivate biosensor platforms that combine high sensitivity with stable, narrow resonances and robust operation under realistic assay conditions.</p>
<p>Surface plasmon resonance (SPR) enables real-time, label-free monitoring of biomolecular binding at functionalized metal&#x2013;dielectric interfaces in the Kretschmann prism configuration (<xref ref-type="bibr" rid="B42">Wang et al., 2025</xref>; <xref ref-type="bibr" rid="B23">Pandey et al., 2022</xref>; <xref ref-type="bibr" rid="B36">Shukla et al., 2022</xref>; <xref ref-type="bibr" rid="B8">Chirico et al., 2025</xref>). Under TM-polarized illumination, small refractive-index perturbations within the evanescent field translate into measurable shifts of the resonance angle or wavelength (<xref ref-type="bibr" rid="B23">Pandey et al., 2022</xref>; <xref ref-type="bibr" rid="B36">Shukla et al., 2022</xref>), which supports early cancer detection and quantitative affinity analysis (<xref ref-type="bibr" rid="B42">Wang et al., 2025</xref>; <xref ref-type="bibr" rid="B8">Chirico et al., 2025</xref>).</p>
<p>Translating SPR to ultralow-concentration carcinoma detection demands continued gains in sensitivity, detection accuracy, and robustness under realistic assay conditions (<xref ref-type="bibr" rid="B3">Bellassai et al., 2019</xref>). Materials engineering at the detection interface&#x2014;modifying plasmonic metals and dielectric/2D overlayers&#x2014;can enhance near-field intensity, increase analyte capture, reduce optical attenuation, and improve chemical stability (<xref ref-type="bibr" rid="B32">Sasidevi et al., 2025</xref>). Critical reviews emphasize that the choice and order of plasmonic metals, dielectric spacers, and 2D materials strongly influence coupling efficiency, field confinement, and figure of merit (<xref ref-type="bibr" rid="B9">Cho et al., 2025</xref>). Recent work spans biomarker and cancer-cell detection (including photonic-crystal-fiber implementations) and explores AI-assisted optimization for SPR design (<xref ref-type="bibr" rid="B35">Shakya et al., 2026</xref>; <xref ref-type="bibr" rid="B30">Ramola et al., 2026</xref>; <xref ref-type="bibr" rid="B26">Ramola et al., 2025a</xref>; <xref ref-type="bibr" rid="B27">Ramola et al., 2025b</xref>; <xref ref-type="bibr" rid="B28">Ramola et al., 2025c</xref>; <xref ref-type="bibr" rid="B29">Ramola et al., 2025d</xref>; <xref ref-type="bibr" rid="B34">Shakya and Singh, 2023</xref>).</p>
<p>Copper (Cu) is attractive for cost-sensitive plasmonic biosensing due to its abundance and strong visible-range resonances (<xref ref-type="bibr" rid="B46">Xin et al., 2021</xref>; <xref ref-type="bibr" rid="B14">Indhu et al., 2024</xref>), but it readily oxidizes in ambient and aqueous environments, degrading resonance quality (<xref ref-type="bibr" rid="B13">Hosseinpour and Johnson, 2017</xref>). A monolayer-scale graphene overlayer acts as an ultrathin diffusion barrier that stabilizes Cu while preserving optical thickness (<xref ref-type="bibr" rid="B10">Garc&#xed;a de Abajo, 2014</xref>); experiments show graphene-protected Cu films retain excellent plasmonic performance over extended periods, even under humid or corrosive conditions (<xref ref-type="bibr" rid="B10">Garc&#xed;a de Abajo, 2014</xref>; <xref ref-type="bibr" rid="B45">Wu et al., 2020</xref>), supporting repeatable calibration and reliable detection of small refractive-index perturbations at low analyte levels in carcinoma assays (<xref ref-type="bibr" rid="B17">Kravets et al., 2014</xref>).</p>
<p>Titanium dioxide (TiO<sub>2</sub>) complements this design by providing chemical stability, biocompatibility, and a comparatively high refractive index (<xref ref-type="bibr" rid="B49">Yesudasu et al., 2023</xref>). Inserted as a nanometric dielectric spacer, TiO<sub>2</sub> improves impedance matching and strengthens near-field confinement, increasing the resonance shift for a given refractive-index change (<xref ref-type="bibr" rid="B2">Basit et al., 2025</xref>). These properties benefit carcinoma biomarker detection, where higher field intensity at the biointerface enhances transduction at low surface coverage and lowers the effective detection limit (<xref ref-type="bibr" rid="B50">Zhang et al., 2018</xref>).</p>
<p>Beyond copper protection, graphene offers a functional, high-surface-area interface that supports dense immobilization of biorecognition elements and facilitates &#x3c0;&#x2013;&#x3c0; interactions with aromatic and &#x3c0;-conjugated biomolecules, improving capture within the plasmonic &#x201c;hot zone&#x201d; (<xref ref-type="bibr" rid="B5">Butt, 2025</xref>). Mechanistically, the two-dimensional conductive sheet modifies the electromagnetic boundary conditions at the metal&#x2013;dielectric interface, slightly hybridizes the metal surface plasmon, and pulls the evanescent-field maximum toward the analyte side&#x2014;effects reported to strengthen near-field interaction and sensitivity in graphene-assisted SPR architectures, including cancer-related detection contexts (<xref ref-type="bibr" rid="B5">Butt, 2025</xref>; <xref ref-type="bibr" rid="B20">Mostufa et al., 2022</xref>).</p>
<p>Within this materials framework, the CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/graphene stack is synergistic: CaF<sub>2</sub>, a low-index prism material, provides efficient momentum matching and convenient angular interrogation; Cu supplies strong plasmonic excitation and cost advantages; TiO<sub>2</sub> improves confinement as a thin spacer; and graphene furnishes a stable, functional biointerface while protecting Cu. We explicitly note the trade-off inherent to adding lossy overlayers: excessive graphene thickness or non-optimal optical parameters can broaden the resonance (FWHM increase) and reduce detection accuracy (DA). Accordingly, we adopt a single-layer graphene overlayer as a practical compromise that maintains a narrow resonance while increasing the fraction of modal energy residing in the analyte. The detection stack is prism-coupled using CaF<sub>2</sub> for efficient momentum matching and robust monitoring of resonance-angle shifts (<xref ref-type="bibr" rid="B47">Xu et al., 2024</xref>).</p>
<p>Building on multilayer SPR designs that balance field concentration and linewidth (<xref ref-type="bibr" rid="B9">Cho et al., 2025</xref>; <xref ref-type="bibr" rid="B20">Mostufa et al., 2022</xref>)&#x2014;and the broader trends summarized above (<xref ref-type="bibr" rid="B35">Shakya et al., 2026</xref>; <xref ref-type="bibr" rid="B26">Ramola et al., 2025a</xref>; <xref ref-type="bibr" rid="B28">Ramola et al., 2025c</xref>)&#x2014;we present a comparative, simulation-based optimization of CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/graphene architectures via transfer-matrix modeling at 633&#xa0;nm. We systematically tune layer thicknesses to concentrate the evanescent field at the sensing interface while preserving resonance sharpness and stability, and we report quantitative performance metrics and tolerance analyses relevant to fabrication variability. The study provides design guidance for cost-effective, high-sensitivity SPR platforms intended for carcinoma biomarkers at ng&#xb7;mL<sup>&#x2212;1</sup> levels.</p>
</sec>
<sec sec-type="materials|methods" id="s2">
<label>2</label>
<title>Materials and methods</title>
<p>This section details the structural configuration of the proposed SPR biosensor architectures, along with the computational modeling and performance evaluation strategies applied throughout this study. The analysis focuses on multilayer designs incorporating CaF<sub>2</sub>, Cu, TiO<sub>2</sub>, and G, with the aim of evaluating their combined impact on plasmonic resonance behavior under ultralow concentration conditions, relevant for the detection of carcinoma biomarkers. Using TMM (see <xref ref-type="sec" rid="s12">Supplementary Material</xref>), we simulated reflectance spectra and evaluated critical sensor parameters, such as the resonance angle shift at a working wavelength of &#x3bb; &#x3d; 633&#xa0;nm.</p>
<sec id="s2-1">
<label>2.1</label>
<title>Performance metrics and optimization protocol</title>
<p>The sensor&#x2019;s performance was evaluated using a set of key optical descriptors, including angular sensitivity (S&#x3b8;), full width at half maximum (FWHM) of the SPR tilt, figure of merit (FoM), and limit of detection (LoD). All simulations were performed under transverse magnetic polarization (TM). Angular sensitivity S&#x3b8; represents the change in the resonance angle (&#x3b8;<sub>spr</sub>) in response to variations in the analyte&#x2019;s refractive index (n<sub>a</sub>) and was calculated using finite differences around a reference index (n<sub>0</sub>) with a small perturbation step, ensuring numerical stability and local linearity of the response.</p>
<p>The FWHM was determined by fitting the reflectance curve R(&#x3b8;) near the resonance minimum, allowing for precise determination of the resonance sharpness. To quantify the balance between sensitivity and resonance sharpness, the FoM was defined as FoM &#x3d; S&#x3b8;/FWHM (units: RIU<sup>&#x2212;1</sup>). The limit of detection (LoD) was estimated based on S&#x3b8; and the measurement resolution, providing a practical indicator of the sensor&#x2019;s ability to detect subtle changes in analyte concentration.</p>
<p>For greater comprehensiveness, two complementary descriptors were calculated when they offered additional information: detection accuracy (DA), defined as DA &#x3d; 1/FWHM (degrees<sup>-1</sup>), and quality factor (QF), expressed as QF &#x3d; &#x3b8;<sub>spr</sub>/FWHM (dimensionless). However, S&#x3b8;, FWHM, FoM, and LoD were emphasized as the primary comparative metrics, while DA and QF are reported in the <xref ref-type="sec" rid="s12">Supplementary Material</xref> where applicable.</p>
<p>To ensure fair comparisons between multilayer configurations, the incidence angle &#x3b8; was scanned across the range encompassing the critical angle and the SPR region using a coarse-to-fine angular resolution strategy, followed by high-resolution interpolation to determine &#x3b8;<sub>spr</sub> with submillimeter accuracy. Layer thicknesses, particularly for the metallic (Cu) and dielectric (TiO<sub>2</sub>) films, were optimized using a discrete grating search to maximize the FoM at the reference index n<sub>0</sub>.</p>
<p>Low-concentration carcinoma detection conditions were modeled by simulating small increments in the refractive index around n<sub>0</sub>. The corresponding metrics (S<sub>&#x3b8;</sub>, FWHM, FoM, and LoD) for the various configurations are summarized in <xref ref-type="sec" rid="s12">Supplementary Tables S17&#x2013;S19</xref>. To reflect realistic serum/plasma workflows, performance was benchmarked around 1&#x2013;5&#xa0;ng&#xb7;mL<sup>&#x2212;1</sup>, consistent with commonly used cut-offs for CEA, CYFRA 21-1, and SCC-Ag and with standard dilution ratios in label-free assays (<xref ref-type="bibr" rid="B11">Hall et al., 2019</xref>; <xref ref-type="bibr" rid="B22">Okamura et al., 2013</xref>; <xref ref-type="bibr" rid="B21">Oh and Bae, 2018</xref>; <xref ref-type="bibr" rid="B6">Calvo-Lozano et al., 2022</xref>).</p>
</sec>
<sec id="s2-2">
<label>2.2</label>
<title>Transfer-matrix modeling (TMM)</title>
<p>The reflectance spectrum R(&#x3b8;) was calculated using the transfer matrix method (TMM), a well-established formalism for the optical analysis of layered media (<xref ref-type="bibr" rid="B44">Wu et al., 2010</xref>; <xref ref-type="bibr" rid="B39">Tene et al., 2025a</xref>). This approach involves the sequential construction of individual layer matrices based on the boundary conditions of the tangential electromagnetic field, followed by multiplication to obtain the overall transfer matrix and the corresponding Fresnel reflection coefficient.</p>
<p>The complete derivation, including expressions for electric and magnetic field continuity, layer-specific propagation matrices, the formulation of the total system matrix, and the final reflectance calculation, provided in the Supplementary Numerical Modeling section (<xref ref-type="sec" rid="s12">Supplementary Section S1</xref>; <xref ref-type="sec" rid="s12">Supplementary Equations S1&#x2013;S7</xref>). A representative SPR resonance curve and a validation of the model against existing multilayer references in the literature are presented in <xref ref-type="sec" rid="s12">Supplementary Figure S1</xref> (<xref ref-type="bibr" rid="B7">Cheon et al., 2014</xref>). All simulations were performed under transverse magnetic polarization (TM), consistent with the excitation conditions for surface plasmon resonance in Kretschmann-type configurations (<xref ref-type="bibr" rid="B31">Rumi et al., 2024</xref>; <xref ref-type="bibr" rid="B24">Rafi et al., 2025</xref>). Layer thicknesses were identified by comparing the discrete configurations reported in <xref ref-type="sec" rid="s3-2">Sections 3.2</xref>&#x2013;<xref ref-type="sec" rid="s3-4">3.4</xref>. The selection criterion prioritized a high FoM &#x3d; S<sub>RI</sub>/FWHM together with a high DA &#x3d; &#x394;&#x3b8;/FWHM and moderate attenuation. The reported &#x201c;optimized&#x201d; values correspond to candidates that outperformed their neighboring tested points in these metrics across the 1&#x2013;5&#xa0;ng&#xb7;mL<sup>&#x2212;1</sup> window.</p>
</sec>
<sec id="s2-3">
<label>2.3</label>
<title>Configurations under study</title>
<p>
<xref ref-type="sec" rid="s12">Supplementary Scheme S1</xref> provides an overview of the architectures analyzed, fixing the stacking order and the parameters compared throughout the study. The incident beam enters through the prism and is swept over the angle &#x3b8; until the surface plasmon mode is excited, as indicated in <xref ref-type="sec" rid="s12">Supplementary Scheme S1</xref>. A continuous metal film is deposited on the exit face of the prism, and its thickness is optimized in each case because it simultaneously governs the coupling efficiency and the resonance linewidth; this relationship produces the reflectance minimum visible along the path marked. Between the metal and the analyte, an ultrathin TiO<sub>2</sub> layer is inserted to shape the evanescent-field profile without incurring excessive losses, a function represented as a thin dielectric band immediately above the metal.</p>
<p>The top sensing layer includes graphene (G), graphene oxide (GO), reduced graphene oxide (rGO), or single-walled semiconducting carbon nanotubes (sSWCNTs), used individually as ultrathin layers. These 2D materials enhance near-field interaction at the sensor-analyte interface due to their high surface area. The sensing region is modeled as a biofluid containing carcinoma-associated biomarkers at concentrations ranging from 1 to 5&#xa0;ng/mL, corresponding to small changes in the local refractive index. All optical constants (n, k) and nominal thicknesses of the prism materials, the Cu and TiO<sub>2</sub> layers, the 2D nanomaterial coatings, and the analyte medium at 633&#xa0;nm are detailed in <xref ref-type="sec" rid="s12">Supplementary Table S2</xref>, along with bibliographic sources (<xref ref-type="bibr" rid="B1">Akib et al., 2024</xref>; <xref ref-type="bibr" rid="B33">Sayed et al., 2025</xref>; <xref ref-type="bibr" rid="B48">Xue et al., 2013</xref>; <xref ref-type="bibr" rid="B40">Tene et al., 2025b</xref>; <xref ref-type="bibr" rid="B38">Song et al., 2020</xref>; <xref ref-type="bibr" rid="B12">Hossea and Rugumira, 2024</xref>; <xref ref-type="bibr" rid="B25">Rafighirami et al., 2025</xref>).</p>
<p>This work is a computational modeling study based on the transfer-matrix method; no experimental fabrication or surface/structural characterization was performed. To support reproducibility and guide future prototypes, <xref ref-type="sec" rid="s4">Section 4</xref> outlines an XPS/XRD verification protocol to confirm layer chemistry (graphene C1s, Cu oxidation state, Ti 2p) and crystalline phase/texture prior to optical benchmarking.</p>
</sec>
<sec id="s2-4">
<label>2.4</label>
<title>Performance metrics and detection limit</title>
<p>We quantify performance using the definitions already given in <xref ref-type="disp-formula" rid="e1">Equations 1</xref>&#x2013;<xref ref-type="disp-formula" rid="e5">5</xref>: the refractive-index sensitivity S<sub>RI</sub> &#x3d; &#x394;&#x3b8;/&#x394;n (1), detection accuracy DA &#x3d; &#x394;&#x3b8;/FWHM (2), quality factor QF &#x3d; S<sub>RI</sub>/FWHM (3), figure of merit FoM &#x3d; S<sub>RI</sub>(1&#x2212;R<sub>min</sub>) (4), and the combined sensitivity factor (5) (<xref ref-type="bibr" rid="B44">Wu et al., 2010</xref>; <xref ref-type="bibr" rid="B39">Tene et al., 2025a</xref>).</p>
<p>Refractive-index sensitivity (angular readout):<disp-formula id="e1">
<mml:math id="m1">
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<mml:mi>n</mml:mi>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
<label>(1)</label>
</disp-formula>
</p>
<p>Detection accuracy (DA):<disp-formula id="e2">
<mml:math id="m2">
<mml:mrow>
<mml:mi>D</mml:mi>
<mml:mi>A</mml:mi>
<mml:mo>&#x3d;</mml:mo>
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</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
<label>(2)</label>
</disp-formula>
</p>
<p>(&#x394;&#x3b8; in degrees; FWHM in degrees; DA is dimensionless.)</p>
<p>Quality factor (QF):<disp-formula id="e3">
<mml:math id="m3">
<mml:mrow>
<mml:mi>Q</mml:mi>
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<mml:mo>&#x3d;</mml:mo>
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</mml:mfrac>
</mml:mrow>
</mml:math>
<label>(3)</label>
</disp-formula>
</p>
<p>Figure of Merit (FoM):<disp-formula id="e4">
<mml:math id="m4">
<mml:mrow>
<mml:mi>F</mml:mi>
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<mml:mrow>
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</mml:mrow>
</mml:math>
<label>(4)</label>
</disp-formula>with R<sub>min</sub> the minimum normalized reflectance at resonance.</p>
<p>Combined Sensitivity Factor (CSF):<disp-formula id="e5">
<mml:math id="m5">
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</mml:math>
<label>(5)</label>
</disp-formula>where R<sub>max</sub> is the normalized reflectance before resonance (non-resonant angle/wavelength).</p>
<p>We define the minimum resolvable angular change &#x3b4;&#x3b8;<sub>min</sub> as the effective angular step of the algorithm. From <xref ref-type="disp-formula" rid="e1">Equation 1</xref>, the smallest resolvable refractive-index change follows by setting &#x394;&#x3b8; &#x3d; &#x3b4;&#x3b8;<sub>min</sub>; therefore:<disp-formula id="e6">
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</mml:math>
<label>(6)</label>
</disp-formula>
</p>
<p>In our baseline simulations (<xref ref-type="disp-formula" rid="e6">Equation 6</xref>), we adopt &#x3b4;&#x3b8;<sub>min</sub> &#x3d; 0.005&#xb0;, hence LOD<sub>n</sub> &#x3d; 0.005&#xb0;/S<sub>RI</sub>. Full TMM definitions and notation are provided in the <xref ref-type="sec" rid="s12">Supplementary Material</xref>.</p>
</sec>
</sec>
<sec sec-type="results|discussion" id="s3">
<label>3</label>
<title>Results and discussions</title>
<sec id="s3-1">
<label>3.1</label>
<title>Prism material selection and optimization</title>
<p>The performance of the SPR biosensor array was evaluated using five solid-state prism materials (BK<sub>7</sub>, CsF, BaF<sub>2</sub>, CaF<sub>2</sub>, and Schott N-SF6 glass). The objective was to identify the prism substrate that provides the most favorable conditions for detecting low-concentration carcinoma biomarkers using angular interrogation. All simulations were performed under TM polarization at &#x3bb; &#x3d; 633&#xa0;nm. CaF<sub>2</sub> proved to be the most suitable prism material, offering the best balance between resonance-angle positioning, sensitivity enhancement, angular displacement, and resonance sharpness, while also ensuring experimental feasibility. <xref ref-type="fig" rid="F1">Figure 1</xref> shows the simulated angular reflectance curves for the five prisms; the RI&#x2013;&#x3b8;<sub>SPR</sub> trend is provided in <xref ref-type="sec" rid="s12">Supplementary Figure S2</xref>.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Simulated angular reflectance curves for systems with different prism materials (Sys<sub>0</sub>&#x2013;Sys<sub>4</sub>) under TM-polarized light at 633&#xa0;nm.</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g001.tif">
<alt-text content-type="machine-generated">Line graph comparing reflectance versus angle of incidence for five systems, distinguished by color and labeled in the legend: Sys0_BK7 (red), Sys1_CaF2 (black), Sys2_CsF (brown), Sys3_SF6 (green), and Sys4_BK7 (blue). Each curve shows a dip in reflectance at different angles between 50 and 80 degrees. Axes are labeled Reflectance and Angle of Incidence (Deg).</alt-text>
</graphic>
</fig>
<p>For performance comparison, we extracted four metrics: angular displacement (&#x394;&#x3b8;), sensitivity improvement, reflectance attenuation, and full width at half maximum (FWHM). As summarized in <xref ref-type="sec" rid="s12">Supplementary Table S3</xref> and <xref ref-type="fig" rid="F2">Figure 2</xref>, CaF<sub>2</sub> achieves a substantial angular displacement (&#x394;&#x3b8; &#x3d; 9.94&#xb0;) and sensitivity improvement (14.90%), ranking second to N-SF6 (&#x394;&#x3b8; &#x3d; 15.78&#xb0;; FWHM &#x3d; 0.49&#xb0;). Despite the strong optical response of SF<sub>6</sub>, CaF<sub>2</sub> offers a more practical balance for experimental SPR platforms (commercial availability in high optical quality, broad transparency, and manageable &#x3b8;SPR window), while maintaining acceptable attenuation (27.53%) and a narrow line (FWHM &#x3d; 1.56&#xb0;). In contrast, BK<sub>7</sub> shows a small angular shift (&#x394;&#x3b8; &#x3d; 0.39&#xb0;) and minimal sensitivity gain, making it suboptimal for low-concentration detection. Based on this overall balance, CaF<sub>2</sub> was selected as the prism for subsequent simulations and sensor evaluations.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Comparison of prism materials in terms of: <bold>(a)</bold> Angular shift (&#x394;&#x3b8;); <bold>(b)</bold> Sensitivity enhancement (%); <bold>(c)</bold> Reflectance attenuation (%); and <bold>(d)</bold> FWHM (&#xb0;).</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g002.tif">
<alt-text content-type="machine-generated">Four-panel bar graph compares CaF&#x2082;, CsF, SF&#x2086;, and BK&#x2087; prism materials. Panel a depicts maximum angle &#x394;&#x3B8;, SF&#x2086; highest, BK&#x2087; lowest. Panel b shows sensitivity, SF&#x2086; highest, BK&#x2087; lowest. Panel c illustrates attenuation, CsF highest, BK&#x2087; lowest. Panel d presents FWHM, CaF&#x2082; highest, SF&#x2086; lowest. Each y-axis is labeled with appropriate physical units.</alt-text>
</graphic>
</fig>
<p>For detection performance, we evaluated four metrics&#x2014;angular displacement (&#x394;&#x3b8;), sensitivity enhancement, reflectance attenuation, and FWHM&#x2014;summarized in <xref ref-type="fig" rid="F2">Figures 2a&#x2013;d</xref> and <xref ref-type="sec" rid="s12">Supplementary Table S3</xref>. CaF<sub>2</sub> shows a large angular shift (&#x394;&#x3b8; &#x3d; 9.94&#xb0;) with 14.90% sensitivity enhancement, 27.53% attenuation, and a narrow line (FWHM &#x3d; 1.56&#xb0;), providing the best practical balance. Schott N-SF6 glass attains the highest &#x394;&#x3b8; (15.78&#xb0;) and the narrowest FWHM (0.49&#xb0;), whereas BK<sub>7</sub> exhibits minimal &#x394;&#x3b8; (0.39&#xb0;) and sensitivity gain. We therefore adopt CaF<sub>2</sub> for subsequent simulations and evaluations (see exact values in <xref ref-type="sec" rid="s12">Supplementary Table S3</xref>).</p>
</sec>
<sec id="s3-2">
<label>3.2</label>
<title>Optimization of the plasmonic metal layer</title>
<p>Following the selection of the prism material, the plasmonic metallic layer was optimized to maximize the sensitivity and angular performance of the SPR biosensor. Copper (Cu) was chosen due to its favorable visible-range response, low cost, and compatibility with graphene-based protective coatings. The optimal Cu thickness was identified by simulating five multilayer configurations using the CaF<sub>2</sub> prism with Cu films of 30, 35, 40, and 45&#xa0;nm, as well as a reference system without specified thickness (Sys<sub>0</sub>&#x2013;Sys<sub>4</sub>). <xref ref-type="fig" rid="F3">Figure 3</xref> shows that increasing the Cu thickness progressively narrows and deepens the resonance. The corresponding change in resonance angle across thicknesses is provided in <xref ref-type="sec" rid="s12">Supplementary Figure S3</xref>, where &#x3b8;<sub>SPR</sub> increases from 76.39&#xb0; at 30&#xa0;nm to 76.66&#xb0; at 45&#xa0;nm.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Reflectance spectra for CaF<sub>2</sub>-coupled SPR systems with varying Cu thicknesses (30&#x2013;45&#xa0;nm).</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g003.tif">
<alt-text content-type="machine-generated">Line graph showing reflectance versus angle of incidence for five systems with varied CaF2/Cu thickness, each indicated by a colored line. All systems exhibit a sharp dip near 75 degrees.</alt-text>
</graphic>
</fig>
<p>The quantitative comparison of performance metrics is presented in <xref ref-type="sec" rid="s12">Supplementary Tables S5, S6</xref>. The CaF<sub>2</sub>/Cu<sub>45</sub>nm configuration achieves the greatest angular shift (&#x394;&#x3b8; &#x3d; 0.69&#xb0;) and the maximum sensitivity improvement (0.90%) when exposed to a simulated refractive index perturbation associated with carcinoma biomarkers (1&#xa0;ng/mL). These values are supported by the trends shown in <xref ref-type="fig" rid="F4">Figures 4a,b</xref>, where both &#x394;&#x3b8; and sensitivity increase with thickness. The improved detection performance at 45&#xa0;nm can be attributed to greater surface plasmon confinement and a larger interaction volume near the detection interface. The 45&#xa0;nm Cu layer provides sufficient field penetration and signal depth to transduce these subtle variations into measurable angular shifts.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Performance metrics for CaF<sub>2</sub>/Cu<sub>th</sub> SPR systems: <bold>(a)</bold> Angular shift (&#x394;&#x3b8;), <bold>(b)</bold> sensitivity enhancement (%), <bold>(c)</bold> reflectance attenuation (%), and <bold>(d)</bold> FWHM (&#xb0;).</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g004.tif">
<alt-text content-type="machine-generated">Four bar charts labeled panels a, b, c, and d compare CaF2/Cu plasmonic metal films of varying copper thicknesses for different parameters: a) delta theta in degrees, b) sensitivity as a percentage, c) attenuation as a percentage, and d) FWHM in degrees. Each parameter exhibits distinct trends across Cu thicknesses of 45 nanometers, 40 nanometers, 35 nanometers, and 30 nanometers as indicated on the x-axes.</alt-text>
</graphic>
</fig>
<p>Attenuation and resonance amplitude were also evaluated. As expected, reflectance attenuation increases with decreasing Cu thickness due to weaker coupling and higher radiative losses. The CaF<sub>2</sub>/Cu<sub>45</sub>nm system maintains a moderate attenuation of 27.53%, as shown in <xref ref-type="fig" rid="F4">Figure 4c</xref>, indicating efficient plasmon excitation with acceptable signal strength. This configuration exhibits the narrowest full width at half the maximum (1.52&#xb0;) among the tested systems (<xref ref-type="fig" rid="F4">Figure 4d</xref>), enabling high angular resolution and a better signal-to-noise ratio. Conversely, thinner Cu layers resulted in reduced performance. The CaF<sub>2</sub>/Cu<sub>30</sub>nm system shows a minimum &#x394;&#x3b8; (0.41&#xb0;), reduced sensitivity (0.54%), high attenuation (75.91%), and a full width-to-magnitude (FWHM) of 4.95&#xb0;, limiting its usefulness for accurate low-concentration detection. Intermediate thicknesses (35&#x2013;40&#xa0;nm) offer better results than the thinnest layer but are still below the optimal 45&#xa0;nm setting. <xref ref-type="sec" rid="s12">Supplementary Table S7</xref> provides further validation, confirming the consistency of SPR peak positions across the various configurations using the real part of Cu&#x2019;s refractive index. All values remain tightly clustered around 76.5&#xb0;, ensuring that the resonance remains within the detectable angular range while simultaneously optimizing sensitivity. The selected t<sub>Cu</sub> outperforms neighboring tested thicknesses, yielding higher FoM with a narrower FWHM.</p>
</sec>
<sec id="s3-3">
<label>3.3</label>
<title>Optimization of the titanium dioxide layer for enhanced plasmonic sensing</title>
<p>TiO<sub>2</sub> was integrated as a dielectric spacer between the plasmonic copper layer and the analyte medium to modulate the optical field distribution and improve sensor sensitivity. Its high refractive index, chemical stability, and compatibility with functional surfaces make it a valuable component in multilayer SPR platforms, especially when probing low-concentration biomolecular interactions. To evaluate the influence of TiO<sub>2</sub> thickness on SPR performance, five multilayer configurations were simulated with fixed prism (CaF<sub>2</sub>) and copper layer (45&#xa0;nm) parameters, varying the TiO<sub>2</sub> spacer from 2 to 32&#xa0;nm. The corresponding systems (Sys<sub>0</sub>&#x2013;Sys<sub>4</sub>) were analyzed using angular reflectance spectra and key detection metrics.</p>
<p>
<xref ref-type="fig" rid="F5">Figure 5</xref> shows that changes in TiO<sub>2</sub> thickness significantly alter the reflectance profile. The sharpest and deepest resonance occurs for CaF<sub>2</sub>/Cu/TiO<sub>2</sub>-8 nm, indicating improved surface-plasmon coupling. The corresponding shift of the SPR angle as a function of spacer thickness is provided in <xref ref-type="sec" rid="s12">Supplementary Figure S4</xref>: the resonance angle increases from 78.01&#xb0; at 2&#xa0;nm to 84.62&#xb0; at 8&#xa0;nm, and then decreases to 65.00&#xb0; at 16 and 32&#xa0;nm, reflecting the change in field-confinement behavior at larger spacer thicknesses.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Reflectance spectra for CaF<sub>2</sub>/Cu systems with varying TiO<sub>2</sub> thicknesses (2&#x2013;32&#xa0;nm).</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g005.tif">
<alt-text content-type="machine-generated">Line graph showing reflectance versus angle of incidence from 65 to 90 degrees for five systems with CaF&#x2082;, Cu, and TiO&#x2082; layers of varying thickness. Reflectance dips appear differently for each system, corresponding to colored lines: red, black, brown, green, and blue.</alt-text>
</graphic>
</fig>
<p>The quantitative results summarized in <xref ref-type="sec" rid="s12">Supplementary Table S9</xref> and visualized in <xref ref-type="fig" rid="F6">Figure 6</xref> reinforce the optical observations. &#x394;&#x3b8; shown in <xref ref-type="fig" rid="F6">Figure 6a</xref> reached 7.36&#xb0; for 8&#xa0;nm, significantly higher than the 0.75&#xb0; for 2&#xa0;nm. While larger shifts were obtained for 16 and 32&#xa0;nm (both 12.25&#xb0;), this came at the expense of resonance quality and signal stability. The sensitivity improvement (<xref ref-type="fig" rid="F6">Figure 6b</xref>) followed a similar trend: the 8&#xa0;nm system achieved an efficiency of 9.53%, outperforming the thinner coatings and offering a solid balance between response and optical quality. The attenuation behavior reflected in <xref ref-type="fig" rid="F6">Figure 6c</xref> confirms this balance. While ultrathin TiO<sub>2</sub> (2&#x2013;8&#xa0;nm) maintained low attenuation values, thicker films caused substantial losses, reaching 94.77% and 95.53% at 16 and 32&#xa0;nm, respectively. The resulting over-attenuation suppresses reflectance modulation and produces resonance dips unusable for practical biodetection. The FWHM analysis, which can be seen in <xref ref-type="fig" rid="F6">Figure 6d</xref>, showed a marked contrast in performance. The 8&#xa0;nm configuration maintained a manageable FWHM of 2.71&#xb0;, while the 16&#xa0;nm system produced a drastically broad and unstable response, highlighting field delocalization and poor resonance sharpness.</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>Performance metrics for SPR systems using different TiO<sub>2</sub> spacer thicknesses: <bold>(a)</bold> &#x394;&#x3b8;, <bold>(b)</bold> Sensitivity, <bold>(c)</bold> Attenuation, and <bold>(d)</bold> FWHM.</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g006.tif">
<alt-text content-type="machine-generated">Four-panel bar graph showing metrics for CaF&#x2082;/Cu/TiO&#x2082; structures with Cu thicknesses of 2, 8, 16, and 32 nanometers: (a) &#x394;&#x3B8; increases with thickness; (b) sensitivity rises sharply from 8 nanometers; (c) attenuation is highest for 16 and 32 nanometers; (d) FWHM reaches a peak at 16 nanometers.</alt-text>
</graphic>
</fig>
<p>
<xref ref-type="sec" rid="s12">Supplementary Table S10</xref> corroborates the angular positioning behavior with consistent SPR peak positions for each TiO<sub>2</sub> thickness. While the 16 and 32&#xa0;nm layers exhibited the largest angular shifts, their resonance widths and high attenuation make them ineffective for stable biodetection in the ng&#xb7;mL<sup>-1</sup> range. In contrast, the 8&#xa0;nm TiO<sub>2</sub> layer demonstrated high sensitivity, acceptable sharpness, and strong resonance modulation, making it optimal for detecting subtle changes in refractive index associated with early-stage carcinoma biomarkers.</p>
</sec>
<sec id="s3-4">
<label>3.4</label>
<title>Optimization of nanomaterial overlayers for SPR biosensing</title>
<p>To improve the plasmonic performance of the CaF<sub>2</sub>/Cu/TiO<sub>2</sub>-based SPR biosensor, nanomaterial overlayers were integrated onto the titanium-dioxide surface. We evaluated ultrathin graphene (G), graphene oxide (GO), reduced graphene oxide (rGO), and single-walled semiconducting carbon nanotubes (sSWCNTs) and quantified their impact on SPR signal quality, sensitivity, and detection performance under carcinoma-biomarker conditions.</p>
<p>
<xref ref-type="fig" rid="F7">Figure 7</xref> shows the reflectance spectra for all nanomaterial-functionalized systems (Sys<sub>0</sub>&#x2013;Sys<sub>4</sub>), where the depth, sharpness, and angular position of the resonance vary with the optical properties of the top layer. Among the materials analyzed, the CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/G configuration exhibits the most favorable spectral profile, with a sharp, well-defined resonance and minimal side-lobe distortion. The corresponding dependence of the SPR angle on the real part of the overlayer refractive index is provided in <xref ref-type="sec" rid="s12">Supplementary Figure S5</xref>, illustrating how different top layers modify the plasmonic coupling condition.</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>Simulated reflectance curves for nanomaterial-functionalized SPR configurations.</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g007.tif">
<alt-text content-type="machine-generated">Line graph comparing reflectance versus angle of incidence for five systems, each represented by a different colored line: red, black, brown, green, and blue. Reflectance sharply decreases at variable critical angles for each system, as noted in the legend: Sys0 (red, CaF2/Cu/TiO2/G), Sys1 (black, CaF2/Cu/TiO2/GO), Sys2 (brown, CaF2/Cu/TiO2/sSWCNT), Sys3 (green, CaF2/Cu/TiO2/rGO), and Sys4 (blue, CaF2/Cu/TiO2/G). X-axis shows angle of incidence from sixty-five to ninety degrees, and y-axis shows normalized reflectance from zero to one.</alt-text>
</graphic>
</fig>
<p>The results comparing the effects of the nanomaterials are summarized in <xref ref-type="sec" rid="s12">Supplementary Tables S11&#x2013;S13</xref> and graphically represented in <xref ref-type="fig" rid="F8">Figure 8</xref>; the refractive index properties used to model each nanomaterial are listed in <xref ref-type="sec" rid="s12">Supplementary Table S13</xref>. G exhibited a strong angular shift (&#x394;&#x3b8; &#x3d; 1.71&#xb0;) and a 2.03% sensitivity improvement, surpassing GO and rGO, and showing a close resemblance to sSWCNTs. The &#x394;&#x3b8; and sensitivity improvement are graphically represented in <xref ref-type="fig" rid="F8">Figures 8a,b</xref>, confirming that graphene and sSWCNTs offer the greatest refractive index responsiveness under identical biofluid conditions. Although rGO showed a slightly higher &#x394;&#x3b8; (3.02&#xb0;) and sensitivity (3.62%), it also exhibited considerable disadvantages in signal attenuation and resonance amplitude. As observed in <xref ref-type="fig" rid="F8">Figure 8c</xref>, the rGO-modified structure exhibits excessive attenuation (71.66%) and degraded spectral contrast, which may compromise detection reliability; its resonance curve broadened considerably, with a FWHM of 6.21&#xb0;, as shown in <xref ref-type="sec" rid="s12">Supplementary Table S12</xref> and <xref ref-type="fig" rid="F8">Figure 8d</xref>. G, on the other hand, maintained low attenuation (30.1%) and a narrower FWHM of 3.85&#xb0;, providing a sharper and more stable resonance, suitable for biodetection. The GO layer showed the worst performance in terms of &#x394;&#x3b8; (0.17&#xb0;), sensitivity (0.20%), and attenuation (9.14%), although it maintained a moderately sharp resonance (FWHM of 2.69&#xb0;). The rGO layer, while optically active, exhibited excessive losses for practical detection, likely due to a lack of homogeneity and surface roughness, leading to plasmonic damping.</p>
<fig id="F8" position="float">
<label>FIGURE 8</label>
<caption>
<p>Performance comparison of nanomaterial overlayers integrated into the CaF<sub>2</sub>/Cu/TiO<sub>2</sub> SPR architecture, were evaluated based on, <bold>(a)</bold> &#x394;&#x3b8;, <bold>(b)</bold> Sensitivity, <bold>(c)</bold> Attenuation, and <bold>(d)</bold> FWHM.</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g008.tif">
<alt-text content-type="machine-generated">Four bar graphs compare nanomaterials labeled CaF2/Cu/TiO2/GO, CaF2/Cu/TiO2/sSWCNT, CaF2/Cu/TiO2/rGO, and CaF2/Cu/TiO2/G. Panel a shows &#x394;&#x3B8; (degrees), panel b shows Sensitivity (percentage), panel c shows Attenuation (percentage), and panel d shows Full Width at Half Maximum (degrees); in each graph, CaF2/Cu/TiO2/rGO has the highest values, while CaF2/Cu/TiO2/GO and CaF2/Cu/TiO2/G have the lowest.</alt-text>
</graphic>
</fig>
<p>Taken together, these results underscore a sensitivity&#x2013;linewidth balance introduced by lossy overlayers. Although adding a 2D overlayer can raise S<sub>RI</sub> and &#x394;&#x3b8;, excessive absorption broadens the resonance (FWHM increase) and erodes detection accuracy DA &#x3d; &#x394;&#x3b8;/FWHM as well as FoM &#x3d; S<sub>RI</sub>/FWHM. Consequently, we adopt a single-layer graphene implementation as a practical configuration that increases S<sub>RI</sub> while preserving a narrow resonance and acceptable attenuation.</p>
<p>The results obtained demonstrate that G is the optimal nanomaterial layer for this SPR architecture. The CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/G configuration successfully combines angular sensitivity, spectral sharpness, and low signal loss, creating favorable conditions for high-resolution detection of carcinoma biomarkers at low concentrations. Graphene&#x2019;s inherent chemical stability and biocompatibility make it ideal for repeatable detection in complex biological environments. This improvement to the nanomaterial provides a critical performance gain for the sensor system, directly contributing to lowering the detection limit and improving reproducibility, key aspects in early-stage cancer diagnosis. In line with this balance, the monolayer choice maximizes FoM while maintaining high DA, ensuring robust angular readout under carcinoma assay conditions. A single graphene sheet strengthens the near-surface field and enhances index-to-angle transduction while keeping the resonance linewidth tight; thicker or lossier overlayers were avoided to preserve angular acuity.</p>
</sec>
<sec id="s3-5">
<label>3.5</label>
<title>Sensor performance</title>
<p>The efficacy of an optimized SPR biosensor for biomedical detection, particularly for the detection of carcinoma biomarkers, was evaluated. The complete CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/G system was analyzed under different carcinoma concentrations, from 1 to 5&#xa0;ng/mL. The system incorporates all previously optimized components: a CaF<sub>2</sub> prism for increased coupling efficiency, a 45&#xa0;nm copper layer for strong plasmonic excitation, an 8&#xa0;nm titanium dioxide intermediate layer for field enhancement, and a G top layer to facilitate biomolecule adsorption and promote signal transduction.</p>
<p>
<xref ref-type="fig" rid="F9">Figure 9</xref> shows the reflectance profiles of the CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/G structure at different carcinoma concentrations, along with the deionized water (DW) reference system. A clear angular shift in the SPR curve is observed with increasing analyte concentration, confirming the biosensor&#x2019;s sensitivity to refractive index variations induced by the presence of carcinoma. The sharpest resonance minimum and the most pronounced shift were recorded at 5&#xa0;ng/mL, indicating the system&#x2019;s ability to detect even small changes in biological analyte levels.</p>
<fig id="F9" position="float">
<label>FIGURE 9</label>
<caption>
<p>SPR reflectance curves of the CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/G biosensor at varying carcinoma concentrations (1&#x2013;5&#xa0;ng/mL), demonstrating distinct resonance angle shifts indicative of enhanced biosensing performance.</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g009.tif">
<alt-text content-type="machine-generated">Line graph illustrating reflectance versus angle of incidence, with seven colored lines representing Sys0 through Sys6 as indicated by a legend. Each system shows a pronounced dip in reflectance between eighty and ninety degrees.</alt-text>
</graphic>
</fig>
<p>The performance results are summarized in <xref ref-type="sec" rid="s12">Supplementary Table S16</xref>. The sensor shows a progressive increase in angular displacement (&#x394;&#x3b8;) from 0.72&#xb0; at 0&#xa0;ng/mL (DW) to 18.10&#xb0; at 5&#xa0;ng/mL carcinoma, as shown in <xref ref-type="fig" rid="F10">Figure 10a</xref>. This significant displacement indicates excellent angular resolution and high detectability. Similarly, sensitivity, expressed as the percentage change in reflectance per unit change in IR, increases from 0.86% to 21.52% across the entire concentration range (<xref ref-type="fig" rid="F10">Figure 10b</xref>). The attenuation values shown in <xref ref-type="fig" rid="F10">Figure 10c</xref> also increase with concentration, reaching up to 93.97% at 5&#xa0;ng/mL. This marked attenuation of the reflectance signal improves the signal-to-noise ratio, although extremely high attenuation levels can hinder accurate detection due to the reduced reflected intensity. It is important to note that a balance must be struck between attenuation and measurement clarity. For example, at concentrations of 3&#xa0;ng/mL or higher, the reduction in signal intensity becomes significant, requiring high-resolution instrumentation for accurate detection.</p>
<fig id="F10" position="float">
<label>FIGURE 10</label>
<caption>
<p>Evaluation of the sensor&#x2019;s performance metrics as a function of carcinoma concentration: <bold>(a)</bold> &#x394;&#x3b8;, <bold>(b)</bold> Sensitivity, <bold>(c)</bold> Attenuation, and <bold>(d)</bold> FWHM.</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g010.tif">
<alt-text content-type="machine-generated">Four green bar graphs display carcinoma concentration effects on CuF2/CuTiO2/G/DIW composites. Panels a to d respectively show increases in &#x394;&#x3B8; (degrees), sensitivity (percent), attenuation (percent), and FWHM (degrees) with higher carcinoma concentrations from one to five nanograms per milliliter.</alt-text>
</graphic>
</fig>
<p>Full-width half-maximum (FWHM) values (<xref ref-type="fig" rid="F10">Figure 10d</xref>) range from 3.65&#xb0; (in dilute water) to 28.11&#xb0; at 5&#xa0;ng/mL, indicating a steeper SPR slope with increasing analyte concentration. While wider resonances may suggest a larger detection volume, they also reduce detection sharpness and can decrease accuracy in systems with overlapping signals or background noise. Therefore, although the sensor achieves a high FWHM at the highest concentration, the optimal working range for both sensitivity and resolution is around 2&#x2013;3&#xa0;ng/mL, where the FWHM remains below 6&#xb0; and attenuation is manageable. <xref ref-type="sec" rid="s12">Supplementary Table S17</xref> further correlates the RI values of carcinoma concentrations with the SPR peak positions. The peak position shifts from 84.83&#xb0; at 1.3317 (DW) to 66.00&#xb0; at 1.3485 (5&#xa0;ng/mL), providing further evidence of the index&#x2019;s high sensitivity. The correlation is consistent and monotonic, supporting the reliability of the angle interrogation method for quantitative biodetection.</p>
<p>The advantages of this system include its high angle shift, excellent sensitivity, and reliable response to small variations in the refractive index, making it suitable for the early detection of carcinomas. Its layered design, which utilizes copper, TiO<sub>2</sub>, and graphene, synergistically contributes to field confinement, signal enhancement, and biochemical interaction. On the other hand, the main limitations relate to high attenuation and resonance broadening at higher concentrations, which may necessitate more precise detection instruments. Furthermore, the nonlinear growth of FWHM could pose interpretive challenges in real-time monitoring applications unless compensated for with advanced signal processing techniques. This balance motivates the use of monolayer graphene: it maintains a sharp resonance while providing the sensitivity gain required near clinically relevant concentrations.</p>
</sec>
<sec id="s3-6">
<label>3.6</label>
<title>Sensor metrics</title>
<p>The practical efficiency of the proposed CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/G SPR biosensor was evaluated for carcinoma detection using quantitative performance metrics: sensitivity (S), detection accuracy (DA), quality factor (QF), figure of merit (FoM), limit of detection (LoD), and signal contrast factor (CSF). These metrics allow for a comprehensive evaluation of the sensor&#x2019;s response to increasing concentrations of carcinoma biomarkers, from 1 to 5&#xa0;ng/mL, modeled as changes in refractive index (RI), as shown in <xref ref-type="sec" rid="s12">Supplementary Table S18</xref>. We interpret all metrics within a sensitivity&#x2013;linewidth balance: increases in S<sub>RI</sub> are only beneficial if FWHM remains sufficiently narrow. By definition, DA &#x3d; &#x394;&#x3b8;/FWHM and FoM &#x3d; S<sub>RI</sub>/FWHM; both penalize resonance broadening. The 1&#x2013;5&#xa0;ng&#xb7;mL<sup>-1</sup> window brackets common decision thresholds used in serum for CEA (&#x223c;5&#xa0;ng&#xb7;mL<sup>-1</sup>), CYFRA 21-1 (&#x223c;3&#x2013;4&#xa0;ng&#xb7;mL<sup>-1</sup>), and SCC-Ag (&#x223c;2&#xa0;ng&#xb7;mL<sup>-1</sup>), aligning our modeled index steps with clinically actionable ranges; typical assay dilutions (&#x2248;1:10&#x2013;1:50) keep the sensor-side concentrations within this window (<xref ref-type="bibr" rid="B11">Hall et al., 2019</xref>; <xref ref-type="bibr" rid="B22">Okamura et al., 2013</xref>; <xref ref-type="bibr" rid="B21">Oh and Bae, 2018</xref>; <xref ref-type="bibr" rid="B6">Calvo-Lozano et al., 2022</xref>).</p>
<p>The sensitivity (&#xb0;/RIU), shown in <xref ref-type="fig" rid="F11">Figure 11a</xref> and <xref ref-type="sec" rid="s12">Supplementary Table S18</xref>, increases with carcinoma concentrations up to 3&#xa0;ng/mL, reaching a maximum of 481.29&#xb0;/RIU for Sys<sub>3</sub> (3&#xa0;ng/mL). Beyond this point, the sensitivity decreases significantly, suggesting saturation-like behavior due to the nonlinear response of the surface plasmon resonance to high refractive index perturbations. A similar trend is observed for the DA, which reaches its maximum value of 0.80 for Sys<sub>3</sub> (<xref ref-type="fig" rid="F11">Figure 11b</xref>). This implies optimal optical confinement and a shift in the resonance angle at moderate analyte concentrations. Sys<sub>1</sub> and Sys<sub>2</sub> (1&#x2013;2&#xa0;ng/mL) show moderate performance with a sensitivity of around 429&#x2013;461 RIU and a DA in the range of 0.19&#x2013;0.64, indicating their ability to detect low biomarker loads, but with lower resolution. Sys<sub>5</sub> (5&#xa0;ng/mL) exhibits the lowest performance in both metrics due to excessive damping and angular broadening, which reduces the distinction between reflectance dips. In the case of QF, which balances angular sharpness and minimum reflectance, it is also maximized for Sys<sub>2</sub> (2&#xa0;ng/mL) and Sys<sub>3</sub> (3&#xa0;ng/mL), as shown in <xref ref-type="fig" rid="F11">Figure 11c</xref> and <xref ref-type="sec" rid="s12">Supplementary Table S18</xref>. These systems offer QF values of 119.89 and 103.27 RIU<sup>&#x2212;1</sup>, respectively. Notably, Sys<sub>4</sub> and Sys<sub>5</sub> show drastic drops in QF, reaching only 50.17 and 18.81 RIU<sup>&#x2212;1</sup>, which correlates with a wider FWHM and less reflectance attenuation, making the signal less distinguishable and therefore more difficult to quantify.</p>
<fig id="F11" position="float">
<label>FIGURE 11</label>
<caption>
<p>Performance of the CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/G biosensor versus carcinoma concentration: <bold>(a)</bold> Sensitivity (&#xb0;&#xb7;RIU<sup>&#x2212;1</sup>), <bold>(b)</bold> Detection Accuracy (DA), and <bold>(c)</bold> Quality Factor (QF). The optimum response occurs near 3&#xa0;ng&#xb7;mL<sup>&#x2212;1</sup>.</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g011.tif">
<alt-text content-type="machine-generated">Three vertically stacked line charts labeled a, b, and c display measurements versus CEA concentration in nanograms per milliliter from one to five. Panel a uses a green line to show sensitivity peaking at three nanograms per milliliter before declining. Panel b presents detection accuracy with an orange line peaking at three nanograms per milliliter and then decreasing. Panel c shows the quality factor in gray, which remains relatively high through three nanograms per milliliter and then drops sharply.</alt-text>
</graphic>
</fig>
<p>The FoM results indicate that it incorporates both sensitivity and angular linewidth. <xref ref-type="fig" rid="F12">Figure 12a</xref> and <xref ref-type="sec" rid="s12">Supplementary Table S19</xref> show that Sys<sub>3</sub> and Sys<sub>4</sub> achieve the highest FoM values, at 3,769.71 and 3,076.25 RIU<sup>&#x2212;1</sup>, respectively. These results underscore the importance of balancing IR-induced shifts and angular acuity to achieve robust detection performance. Accordingly, the graphene-overlayer case provides a net gain only when the resonance remains sharp. In our implementation a single-layer graphene preserves a narrow FWHM, which sustains high DA and FoM while raising S<sub>RI</sub>; thicker or lossier overlayers would reverse this benefit. Again, Sys<sub>5</sub> exhibits excessive broadening, reflected in a reduced FoM of 1,673.22 RIU<sup>&#x2212;1</sup>. In <xref ref-type="fig" rid="F12">Figure 12b</xref> and <xref ref-type="sec" rid="s12">Supplementary Table S19</xref>, Sys<sub>3</sub> achieves the lowest LoD, at 1.03 &#xd7; 10<sup>&#x2212;5</sup>, confirming its excellent resolution in detecting trace carcinoma biomarkers. Conversely, Sys<sub>5</sub> registers the highest LoD, at 2.84 &#xd7; 10<sup>&#x2212;5</sup>, indicating poor detection performance due to signal saturation and broadening. The CSF results on <xref ref-type="fig" rid="F12">Figure 12c</xref> highlight the sharpness and amplitude of the resonance drop-off relative to the background. Sys<sub>3</sub> again exhibits the highest CSF, at 3,822.99, confirming its excellent signal distinction at optimal carcinoma concentrations. In contrast, Sys<sub>5</sub> drops to 1,674.34, further corroborating its reduced contrast and poor usability in real-world biodetection scenarios. Consistent with this trade-off, we retain a monolayer graphene overlayer as the preferred configuration to maximize FoM without compromising DA.</p>
<fig id="F12" position="float">
<label>FIGURE 12</label>
<caption>
<p>Extended metrics of SPR biosensor systems: <bold>(a)</bold> FoM, <bold>(b)</bold> LoD), and <bold>(c)</bold> Contrast of Signal Factor (CSF), highlighting the superiority of Sys<sub>3</sub> (3&#xa0;ng/mL) across all indicators.</p>
</caption>
<graphic xlink:href="fbioe-14-1789453-g012.tif">
<alt-text content-type="machine-generated">Panel a shows a line graph of FoM versus CEA concentration, peaking at four nanograms per milliliter. Panel b presents a line graph of LoD versus CEA concentration, increasing most sharply at higher concentrations. Panel c displays a line graph of CSF versus UGLU concentration, also peaking at four grams per deciliter.</alt-text>
</graphic>
</fig>
<p>From the comparative analysis of all sensor metrics, Sys<sub>3</sub>, corresponding to a carcinoma concentration of 3&#xa0;ng&#xb7;mL<sup>&#x2212;1</sup>, proves to be the most effective configuration. It offers a balanced trade-off between sensitivity (481.29&#xb0;/RIU), DA (0.80), FoM (3,769.71), and LoD (1.03 &#xd7; 10<sup>&#x2212;5</sup>), while maintaining a high CSF (3,822.99). These figures clearly demonstrate that this system achieves an optimal resonance shift with a narrow reflectance dip, which is vital for reliable SPR biodetection. Importantly, while Sys<sub>2</sub> exhibits slightly lower values in some metrics, it delivers competitive performance with even lower angular broadening and a higher QF. Therefore, for ultra-precision applications where resolution outweighs dynamic range, Sys<sub>2</sub> is also a strong option. In the case of Sys<sub>5</sub> (high analyte concentration), performance degradation is observed across all parameters: the reflectance curve flattens, sensitivity decreases, LoD increases, and CSF decreases, likely due to field saturation at the detection interface.</p>
<p>Although a full tolerance study was not undertaken, trends between neighboring tested points indicate that linewidth is more sensitive to t<sub>Cu</sub> than to t<sub>TiO2</sub>, and that extra graphene layers broaden the resonance; we therefore retain a monolayer to safeguard DA and FoM.</p>
</sec>
<sec id="s3-7">
<label>3.7</label>
<title>Spatial distribution of the electric field and sensing interface performance</title>
<p>The performance metrics and angular analyses described above are evaluated by the electromagnetic field distribution along the sensor&#x2019;s multilayer structure. <xref ref-type="sec" rid="s12">Supplementary Figure S6</xref> presents the spatial profile of the normalized electric-field intensity (&#x2223;E&#x2223;<sup>2</sup>) as a function of distance from the prism, extending through each layer of the optimized CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/G configuration. This simulation clarifies how plasmonic waves are confined and propagated, and how they interact with carcinoma analytes at varying concentrations. The color-coded vertical bands indicate the Cu, TiO<sub>2</sub>, graphene, and analyte regions. The &#x2223;E&#x2223;<sup>2</sup> profiles are shown for deionized water (reference) and carcinoma concentrations from 1 to 5&#xa0;ng&#xb7;mL<sup>&#x2212;1</sup>. Each curve reveals how the plasmonic field extends from the metal interface into the surrounding dielectric, a key factor governing penetration depth and sensitivity to biomolecular changes.</p>
<p>As shown in <xref ref-type="sec" rid="s12">Supplementary Figure S6</xref>, the &#x2223;E&#x2223;<sup>2</sup> profile exhibits a hotspot at the Graphene/analyte interface and an evanescent tail that extends into the analyte. As carcinoma concentration (and thus refractive index) increases, a larger fraction of the modal energy samples the sensing region, which directly steepens the &#x3b8;&#x2013;n response (higher angular refractive-index sensitivity S<sub>RI</sub>; see <xref ref-type="sec" rid="s2-1">Section 2.1</xref>). In practical terms, stronger near-surface &#x2223;E&#x2223;<sup>2</sup> yields a larger &#x394;&#x3b8; for a given &#x394;n. The curves at 3&#x2013;4&#xa0;ng/mL (Sys<sub>3</sub>, Sys<sub>4</sub>) show the largest decay tail within the analyte, consistent with the superior DA and FoM reported for these configurations, because DA &#x3d; &#x394;&#x3b8;/FWHM and FoM &#x3d; S<sub>RI</sub>(1&#x2212;R<sub>min</sub>)/FWHM. At 5&#xa0;ng/mL, the field extends further but the near-interface growth diminishes, indicating the onset of saturation and matching the modest performance gains at this concentration.</p>
<p>The presence of the graphene monolayer and the TiO<sub>2</sub> spacer plays a fundamental role in shaping this field distribution. Graphene contributes to the enhancement of the local field due to its high surface conductivity and its ability to withstand &#x3c0;&#x2013;&#x3c0; interactions with biomolecules (<xref ref-type="bibr" rid="B19">Li et al., 2016</xref>). Meanwhile, the 8&#xa0;nm TiO<sub>2</sub> layer provides a dielectric fit that not only stabilizes the copper layer but also shifts the field maximum away from the lossy metal, improving confinement in the detection region. Combined, these layers provide a custom-designed interface that balances field confinement with analytical accessibility. This customized distribution ensures that even low-concentration biomarkers can modulate the plasmonic resonance, enhancing the sensor&#x2019;s ability to detect early-stage carcinoma. This field localization also explains the behavior of the DA and the FoM. Because DA &#x3d; &#x394;&#x3b8;/FWHM and FoM &#x3d; S<sub>RI</sub>(1&#x2212;R<sub>min</sub>)/FWHM (<xref ref-type="sec" rid="s2-1">Section 2.1</xref>), the simultaneous increase of &#x394;&#x3b8; driven by the near-surface hotspot, together with impedance matching from the CaF<sub>2</sub>&#x200b; prism and the TiO<sub>2</sub>&#x200b; spacer that keeps the resonance FWHM narrow, results in higher DA and FoM without excessive linewidth penalties.</p>
<p>When comparing curves, differences in the field profile become appreciable from 2&#xa0;ng/mL onward. At 3 ng/mL&#x2014;the operating point that maximizes interface sampling&#x2014;the decay tail within the analyte is largest among the non-saturating cases, consistent with the observed increases in S<sub>RI</sub> and in the composite metrics (DA and FoM). At 5&#xa0;ng/mL, the field extends further but the growth in &#x2223;E&#x2223;<sup>2</sup> near the interface diminishes, indicating the onset of saturation and matching the modest performance gains reported at that concentration.</p>
</sec>
<sec id="s3-8">
<label>3.8</label>
<title>Comparative analysis with reported SPR biosensors</title>
<p>A comparative analysis was performed with several state-of-the-art sensors published in the literature. The results, summarized in <xref ref-type="sec" rid="s12">Supplementary Table S19</xref>, highlight the significant performance improvements achieved in this work, especially in terms of sensitivity, QF, and DA, crucial parameters for the biodetection of carcinomas. <xref ref-type="bibr" rid="B15">Juwel et al. (2026)</xref> presented an SPR configuration that achieves a sensitivity of 393.83&#xb0;/RIU at a concentration of 5&#xa0;ng/mL, while (<xref ref-type="bibr" rid="B18">Kumar et al., 2025</xref>) achieved 348.07&#xb0;/RIU with the same analyte concentration.</p>
<p>Our work achieves a maximum sensitivity of 481.29&#xb0;/RIU at 3&#xa0;ng/mL, significantly exceeding the maximum values &#x200b;&#x200b;reported in the aforementioned studies. Furthermore, the sensor reaches 429.17&#xb0;/RIU with only 1&#xa0;ng/mL, demonstrating its impressive responsiveness to trace levels of carcinoma, a vital characteristic for early diagnosis where antigen levels are low. <xref ref-type="bibr" rid="B16">Khodiae and Heidarzadeh (2025)</xref> reported a relatively modest sensitivity of 163.63&#xb0;/RIU; our platform surpasses this value almost threefold at comparable or lower concentrations. In terms of QF, our sensor achieves a maximum value of 119.89 RU<sup>&#x2212;1</sup> at 2&#xa0;ng/mL, again exceeding the 90.11 RU<sup>&#x2212;1</sup> obtained by Juwel et al. and the 53.9 RU<sup>&#x2212;1</sup> reported (<xref ref-type="bibr" rid="B25">Rafighirami et al., 2025</xref>) using a structure focused on the application of Au.</p>
<p>DA in this study reaches a maximum of 0.80 for 3&#xa0;ng/mL of carcinoma, which is significantly higher than the 0.22 observed in the design of (<xref ref-type="bibr" rid="B15">Juwel et al., 2026</xref>) and the 0.10 in the system of (<xref ref-type="bibr" rid="B16">Khodiae and Heidarzadeh, 2025</xref>). This high DA underscores the effectiveness of our design in accurately locating the SPR angle corresponding to the presence of the analyte, a crucial attribute for clinical biodetection applications.</p>
<p>One of the distinctive aspects of our sensor lies in the optimized integration of G and TiO<sub>2</sub> on Cu, supported on a CaF<sub>2</sub> substrate. This configuration not only ensures better plasmonic coupling and surface interaction with biomolecules, but also mitigates common drawbacks such as the large resonance drops or low attenuation observed in other architectures. The use of graphene as the end layer introduces a large surface area and excellent biocompatibility, which improves analyte interaction and functionalization potential, especially important for the biodetection of carcinomas. The TiO<sub>2</sub> acts as a spacer that stabilizes the Cu layer and promotes field enhancement without significantly increasing attenuation losses.</p>
</sec>
</sec>
<sec id="s4">
<label>4</label>
<title>Limitations</title>
<p>This study presents a computational optimization of a CaF<sub>2</sub>/Cu/TiO<sub>2</sub>/Graphene SPR architecture using the transfer-matrix method under the modeling conditions specified in <xref ref-type="sec" rid="s2">Section 2</xref>; no experimental fabrication or surface/structural characterization was performed. To make the scope explicit and to define a clear path toward prototyping, we outline an integrated verification plan. X-ray photoelectron spectroscopy (XPS) will be employed to confirm graphene&#x2019;s sp<sup>2</sup> carbon in the C1s envelope (&#x223c;284.5&#xa0;eV), to assess the copper chemical state via Cu 2p (consistent with metallic Cu and without CuO shake-up satellites at &#x223c;941&#x2013;944&#xa0;eV), and to verify the Ti 2p doublet characteristic of TiO<sub>2</sub>. In parallel, X-ray diffraction (XRD) will be used to determine the TiO<sub>2</sub> phase (e.g., anatase versus rutile) and the preferred crystallographic texture of Cu, while screening for parasitic copper oxides. These structural and chemical verifications will be paired with angle-resolved optical measurements to compare the measured resonance position and linewidth against model predictions. Together, this framework operationalizes the transition from simulation to prototype and specifies the experimental criteria&#x2014;layer identity, oxidation state, and phase purity&#x2014;needed to benchmark the modeled performance before device fabrication.</p>
<p>In addition, all metrics reported here (S, DA, FoM, FWHM, LoD) are local to 633&#xa0;nm; extension to other bands or to wavelength interrogation would require dispersive n(&#x3bb;),k(&#x3bb;) and re-optimization of layer thicknesses, as resonance linewidth and contrast can shift with wavelength. Experimental realization may also introduce graphene-transfer defects/residues and added optical loss during surface functionalization, as well as long-term drift from copper oxidation at defects and biofouling; these factors can broaden the resonance and reduce DA/FoM unless mitigated by monolayer-quality transfer, gentle &#x3c0;&#x2013;&#x3c0; linkers with antifouling steps, edge sealing, and standardized stability/regeneration tests. These limitations do not alter the qualitative trends reported but delineate the operating window and the process controls required for future validation.</p>
</sec>
<sec sec-type="conclusion" id="s5">
<label>5</label>
<title>Conclusion</title>
<p>In this work, through systematic layer-by-layer optimization, the potential of this platform for high-performance biodetection was demonstrated, highlighting the synergy between material selection, structural tuning, and optical field enhancement. Key structural components were initially optimized individually. The choice of CaF<sub>2</sub> as the prism material proved optimal due to its high refractive index and superior light coupling efficiency in the SPR regime. In the study of the metal layer, copper (Cu) was selected instead of noble metals such as gold or silver due to its favorable plasmonic properties and its tunable resonance response in conjunction with the dielectric interlayers. The TiO<sub>2</sub> dielectric spacer interlayer played a fundamental role in modulating resonance sharpness, improving sensitivity by modifying field confinement at the metal-dielectric interface.</p>
<p>The incorporation of two-dimensional nanomaterials, such as G, GO, rGO, and SWCNT, further improved performance by altering the local refractive index environment and interacting favorably with the evanescent field, presenting more balanced and optimized metrics, including a sensitivity of up to 481.29&#xb0;/RIU, a DA accuracy of 0.80 degrees<sup>-1</sup>, and a QF of 108.27. A detailed analysis of performance under different carcinoma concentrations (1&#x2013;5&#xa0;ng/mL) showed a strong agreement between the modeled refractive index changes and the angular resonance variations. The peak shift of SPR, sensitivity (%), attenuation, and FWHM values at all concentrations indicated a consistent and measurable optical response. The sensor was able to detect &#x394;&#x3b8; changes of up to 18.10&#xb0; and exhibited a LoD of only 0.88 &#xd7; 10<sup>&#x2212;5</sup> RIU, demonstrating its suitability for the early identification of biomarkers. This work lays the groundwork for future experimental validation and integration into compact point-of-care SPR diagnostic devices. Follow-up work will implement XPS/XRD verification of layer chemistry and phase and will benchmark the modeled optical response against fabricated devices.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s6">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s12">Supplementary Material</xref>, further inquiries can be directed to the corresponding authors.</p>
</sec>
<sec sec-type="author-contributions" id="s7">
<title>Author contributions</title>
<p>TT: Writing &#x2013; original draft, Data curation, Methodology, Software, Visualization, Formal Analysis, Investigation, Conceptualization, Resources, Supervision, Funding acquisition, Project administration, Writing &#x2013; review and editing, Validation. KT: Formal Analysis, Methodology, Writing &#x2013; review and editing, Investigation, Writing &#x2013; original draft, Resources. MM: Formal Analysis, Writing &#x2013; review and editing, Resources, Writing &#x2013; original draft, Investigation, Methodology. LG: Investigation, Writing &#x2013; review and editing, Methodology, Writing &#x2013; original draft, Validation. RK: Investigation, Writing &#x2013; review and editing, Validation, Writing &#x2013; original draft, Methodology. CV: Funding acquisition, Resources, Formal Analysis, Validation, Visualization, Project administration, Writing &#x2013; review and editing, Writing &#x2013; original draft, Methodology, Investigation, Supervision, Software, Data curation, Conceptualization.</p>
</sec>
<ack>
<title>Acknowledgements</title>
<p>CV wishes to thank the INFN-Laboratori Nazionali di Frascati for its hospitality during the completion of this work.</p>
</ack>
<sec sec-type="COI-statement" id="s9">
<title>Conflict of interest</title>
<p>The author(s) declared that this work was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="ai-statement" id="s10">
<title>Generative AI statement</title>
<p>The author(s) declared that generative AI was used in the creation of this manuscript. Grammarly AI PRO for English improvement.</p>
<p>Any alternative text (alt text) provided alongside figures in this article has been generated by Frontiers with the support of artificial intelligence and reasonable efforts have been made to ensure accuracy, including review by the authors wherever possible. If you identify any issues, please contact us.</p>
</sec>
<sec sec-type="disclaimer" id="s11">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec sec-type="supplementary-material" id="s12">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fbioe.2026.1789453/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fbioe.2026.1789453/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="Supplementaryfile1.docx" id="SM1" mimetype="application/docx" xmlns:xlink="http://www.w3.org/1999/xlink"/>
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<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1070445/overview">Amit Shakya</ext-link>, Sant Longowal Institute of Engineering and Technology, India</p>
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