<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article article-type="brief-report" dtd-version="2.3" xml:lang="EN" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Bioeng. Biotechnol.</journal-id>
<journal-title>Frontiers in Bioengineering and Biotechnology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Bioeng. Biotechnol.</abbrev-journal-title>
<issn pub-type="epub">2296-4185</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">1402831</article-id>
<article-id pub-id-type="doi">10.3389/fbioe.2024.1402831</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Bioengineering and Biotechnology</subject>
<subj-group>
<subject>Brief Research Report</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Multiplexed detection of eight respiratory viruses based on nanozyme colorimetric microfluidic immunoassay</article-title>
<alt-title alt-title-type="left-running-head">Wu et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fbioe.2024.1402831">10.3389/fbioe.2024.1402831</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Wu</surname>
<given-names>Feng</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1106016/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Cai</surname>
<given-names>Defeng</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2555935/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Shi</surname>
<given-names>Xueying</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2691394/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Li</surname>
<given-names>Ping</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2690824/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Ma</surname>
<given-names>Lan</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1177981/overview"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/Writing - review &#x26; editing/"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Institute of Biopharmaceutical and Health Engineering</institution>, <institution>Tsinghua Shenzhen International Graduate School</institution>, <institution>Tsinghua University</institution>, <addr-line>Shenzhen</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Shenzhen Institute for Drug Control</institution>, <addr-line>Shenzhen</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Department of Clinical Laboratory (Pathology) Centre, South China Hospital of Shenzhen University</institution>, <addr-line>Shenzhen</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>State Key Laboratory of Chemical Oncogenomics</institution>, <institution>Tsinghua Shenzhen International Graduate School</institution>, <institution>Tsinghua University</institution>, <addr-line>Shenzhen</addr-line>, <country>China</country>
</aff>
<aff id="aff5">
<sup>5</sup>
<institution>Institute of Biomedical Health Technology and Engineering</institution>, <institution>Shenzhen Bay Laboratory</institution>, <addr-line>Shenzhen</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1853115/overview">Chao Zhang</ext-link>, Southern Medical University, China</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2695935/overview">Jing Su</ext-link>, Shandong Jiaotong University, China</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2654523/overview">Yu Li</ext-link>, Naval Medical Center, China</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/2712662/overview">Shu Xing</ext-link>, Chinese Academy of Sciences (CAS), China</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Ping Li, <email>li.ping@sz.tsinghua.edu.cn</email>; Lan Ma, <email>malan@sz.tsinghua.edu.cn</email>
</corresp>
</author-notes>
<pub-date pub-type="epub">
<day>16</day>
<month>05</month>
<year>2024</year>
</pub-date>
<pub-date pub-type="collection">
<year>2024</year>
</pub-date>
<volume>12</volume>
<elocation-id>1402831</elocation-id>
<history>
<date date-type="received">
<day>18</day>
<month>03</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>15</day>
<month>04</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2024 Wu, Cai, Shi, Li and Ma.</copyright-statement>
<copyright-year>2024</copyright-year>
<copyright-holder>Wu, Cai, Shi, Li and Ma</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Pandemics caused by respiratory viruses, such as the SARS-CoV-1/2, influenza virus, and respiratory syncytial virus, have resulted in serious consequences to humans and a large number of deaths. The detection of such respiratory viruses in the early stages of infection can help control diseases by preventing the spread of viruses. However, the diversity of respiratory virus species and subtypes, their rapid antigenic mutations, and the limited viral release during the early stages of infection pose challenges to their detection. This work reports a multiplexed microfluidic immunoassay chip for simultaneous detection of eight respiratory viruses with noticeable infection population, namely, influenza A virus, influenza B virus, respiratory syncytial virus, SARS-CoV-2, human bocavirus, human metapneumovirus, adenovirus, and human parainfluenza viruses. The nanomaterial of the nanozyme (Au@Pt nanoparticles) was optimized to improve labeling efficiency and enhance the detection sensitivity significantly. Nanozyme-binding antibodies were used to detect viral proteins with a limit of detection of 0.1&#xa0;pg/mL with the naked eye and a microplate reader within 40&#xa0;min. Furthermore, specific antibodies were screened against the conserved proteins of each virus in the immunoassay, and the clinical sample detection showed high specificity without cross reactivity among the eight pathogens. In addition, the microfluidic chip immunoassay showed high accuracy, as compared with the RT-PCR assay for clinical sample detection, with 97.2%/94.3% positive/negative coincidence rates. This proposed approach thus provides a convenient, rapid, and sensitive method for simultaneous detection of eight respiratory viruses, which is meaningful for the early diagnosis of viral infections. Significantly, it can be widely used to detect pathogens and biomarkers by replacing only the antigen-specific antibodies.</p>
</abstract>
<kwd-group>
<kwd>respiratory virus</kwd>
<kwd>nanozyme</kwd>
<kwd>microfluidics</kwd>
<kwd>immunoassay</kwd>
<kwd>multiplexed detection</kwd>
</kwd-group>
<contract-sponsor id="cn001">Shenzhen Science and Technology Innovation Program<named-content content-type="fundref-id">10.13039/501100017610</named-content>
</contract-sponsor>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-at-acceptance</meta-name>
<meta-value>Biomaterials</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Acute respiratory tract diseases (ARDs) are often caused by viral infections and are one of the primary causes of morbidity and mortality related to communicable diseases worldwide (<xref ref-type="bibr" rid="B21">WHO, 2009</xref>; <xref ref-type="bibr" rid="B6">Diseases et al., 2020</xref>). One of the major features of an ARD is collaborative infection by multiple viruses (<xref ref-type="bibr" rid="B20">Renois et al., 2010</xref>; <xref ref-type="bibr" rid="B17">Pigny et al., 2021</xref>; <xref ref-type="bibr" rid="B12">Jiang et al., 2022</xref>), which poses challenges in diagnosis and treatment. The main respiratory viruses in such cases include the influenza virus, coronavirus, respiratory syncytial virus, human bocavirus, human metapneumovirus, adenovirus, human parainfluenza viruses, and rhinovirus, which impose a huge burden on the health system (<xref ref-type="bibr" rid="B5">Dhanasekaran et al., 2022</xref>; <xref ref-type="bibr" rid="B11">Haney et al., 2022</xref>). Therefore, it is of great significance to control the transmission of respiratory viruses, especially during the early stages of infection. Furthermore, diagnosis during the early stages of infection can help determine the basis of clinical treatment while reducing the development of severe cases. However, the diversity of respiratory virus species and their subtypes could result in insufficient diagnoses because of their common symptoms. At present, the frequently used detection methods for respiratory viruses include viral nucleic acid detection and viral antigen detection (<xref ref-type="bibr" rid="B19">Ren et al., 2023</xref>). Standard quantitative RT-PCR and multiplexed RT-PCR are widely used in diagnostic laboratories to detect viral nucleic acids with high sensitivity (<xref ref-type="bibr" rid="B13">Lee and Suarez, 2004</xref>; <xref ref-type="bibr" rid="B25">You et al., 2017</xref>; <xref ref-type="bibr" rid="B4">Corman et al., 2020</xref>; <xref ref-type="bibr" rid="B10">Goto et al., 2023</xref>). Next-generation sequencing (NGS) is a mean of the high-throughput readout (<xref ref-type="bibr" rid="B24">Yelagandula et al., 2021</xref>; <xref ref-type="bibr" rid="B9">Gaston David et al., 2022</xref>; <xref ref-type="bibr" rid="B18">Ramos et al., 2023</xref>), but these methods have limitations such as cumbersome procedures and poor timeliness for detection. Hence, there is urgent need for an ultrasensitive yet rapid detection technology for simultaneous diagnosis of multiple respiratory viruses.</p>
<p>Rapid and simple detection methods, such as the lateral flow immunoassay (LFIA), played a vital role during the COVID-19 pandemic (<xref ref-type="bibr" rid="B2">Castrej&#xf3;n-Jim&#xe9;nez et al., 2022</xref>; <xref ref-type="bibr" rid="B7">Filchakova et al., 2022</xref>). Noble metal catalytic nanoparticles (NPs) were widely used in the LFIA as they could regulate the local surface plasmon resonance effect though the morphology and deposition of platinum, which presents as dark blue or black, to improve the colorimetric sensitivity. These NPs showed high catalytic efficiency, extraordinary stability in complex environments, and facile production to emerge as promising materials for signal amplification in colorimetric immunoassays (<xref ref-type="bibr" rid="B8">Gao et al., 2017</xref>; <xref ref-type="bibr" rid="B16">Loynachan et al., 2017</xref>; <xref ref-type="bibr" rid="B22">Wrasman et al., 2018</xref>; <xref ref-type="bibr" rid="B15">Lin et al., 2021</xref>; <xref ref-type="bibr" rid="B26">Zhu et al., 2024</xref>). In this study, bioinformatics analysis and nanomaterial optimization were combined to systematically improve the sensitivity, specificity, and detection rate of viral diagnosis. Furthermore, the labeling of nanozymes was optimized to significantly enhance the sensitivity of detection of respiratory virus antigens. By combining the aforementioned efforts with a microfluidic chip design, rapid and sensitive detection of respiratory virus was achieved along with visual detection of the antigen with a limit of detection (LOD) of 0.1&#xa0;pg/mL and high detection rate. This study provides a convenient multiplexed microfluidic immunoassay chip based on nanozymes for the detection of eight respiratory viruses, thus laying a foundation for the early diagnosis of other viruses and biomarkers.</p>
</sec>
<sec sec-type="materials|methods" id="s2">
<title>Materials and methods</title>
<sec id="s2-1">
<title>Reagents</title>
<p>Disodium hydrogenphosphate (Na<sub>2</sub>HPO<sub>4</sub>, &#x2265;99.0%), sodium phosphate monobasic monohydrate (NaH<sub>2</sub>PO<sub>4</sub>&#x2219;H<sub>2</sub>O, 98%&#x2013;102.0%), sodium carbonate (Na<sub>2</sub>CO<sub>3</sub>, &#x2265;99.0%), sodium bicarbonate (NaHCO<sub>3</sub>, 99.7%&#x2013;100.3%), 2-(N-morpholino) ethanesulfonic acid (MES), and Tween-20 were purchased from Sangon Biotech (Shanghai, China). Gold (III) chloride tetrahydrate (HAuCL<sub>4</sub>&#x2219;4H<sub>2</sub>O, Au&#x3e;47.8%) was purchased from Beijing Huawei Ruike Chemical (Beijing, China). Hydrogen hexachloroplatinate (IV) hexahydrate (H<sub>2</sub>PtCL<sub>6</sub>&#x2219;6H<sub>2</sub>O, 99%) was purchased from Energy Chemical (Shanghai, China). Polyvinylpyrrolidone (PVP, molecular weight: 10kDa) was purchased from Tokyo Chemical Industry. Streptavidin, sulfo-NHS-LC-biotin, 1-ethyl-3-[3-dimethylaminopropyl] carbodiimide hydrochloride (EDC), and N-hydroxysulfosuccinimide (sulfo-NHS) were purchased from Thermo Fisher Scientific (United States). Sodium citrate tribasic dihydrate (99%), L-ascorbic acid (AA, 99%), bovine serum albumin (BSA), and casein block buffer were purchased from Sigma-Aldrich. Polydimethylsiloxane (PDMS; Sylgard 184) was purchased from Dow Corning (United States); photoresist (SU-8 2050) was purchased from MicroChem Corp. (MA, United States); carboxyl-functionalized magnetic beads (MBs) with an average diameter of 10 &#xb5;m were purchased from Suzhou Nanomicro Technology (China); one-step TMB substrate solution was purchased from Beijing Makewonderbio (Beijing, China). The respiratory virus proteins and antibodies (mAb IgG) were obtained from the Institute of Biopharmaceutical and Health Engineering, Tsinghua University. All aqueous solutions were prepared using deionized (DI) water with a resistivity of 18.2&#xa0;M&#x3a9;&#xb7;cm.</p>
</sec>
<sec id="s2-2">
<title>Anti-respiratory virus monoclonal antibodies</title>
<p>Monoclonal antibodies with high specificities against influenza A virus, influenza B virus, respiratory syncytial virus (RSV), SARS-CoV-2, human bocavirus (HBoV), human metapneumovirus (HMPV), adenovirus (AdV), and human parainfluenza viruses (HPIVs) were produced and identified, and their target proteins are shown in <xref ref-type="table" rid="T1">Table 1</xref>. The antibodies against the nucleocapsid proteins of the HPIVs cannot cross-react with other subtypes from among HPIV-1, HPIV-2, and HPIV-3, so specific antibodies were selected for each subtype and mixed to detect these three subtypes.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Monoclonal antibodies against respiratory viruses and their target proteins.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Monoclonal antibody</th>
<th align="left">Respiratory virus</th>
<th align="left">Targeted antigen protein</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Anti-IVA-1, 2</td>
<td align="left">Influenza A virus (IAV)</td>
<td align="left">Nucleocapsid protein</td>
</tr>
<tr>
<td align="left">Anti-IVB-1, 2</td>
<td align="left">Influenza B virus (IBV)</td>
<td align="left">Nucleocapsid protein</td>
</tr>
<tr>
<td align="left">Anti-RSV-1, 2</td>
<td align="left">Respiratory syncytial virus (RSV)</td>
<td align="left">Nucleocapsid protein</td>
</tr>
<tr>
<td align="left">Anti-SARS2-1, 2</td>
<td align="left">SARS-CoV-2</td>
<td align="left">Nucleocapsid protein</td>
</tr>
<tr>
<td align="left">Anti-HBoV-1, 2</td>
<td align="left">Human bocavirus (HBoV)</td>
<td align="left">Major capsid protein VP1</td>
</tr>
<tr>
<td align="left">Anti-HMPV-1, 2</td>
<td align="left">Human metapneumovirus (HMPV)</td>
<td align="left">Nucleocapsid protein</td>
</tr>
<tr>
<td align="left">Anti-AdV-1, 2</td>
<td align="left">Adenovirus (AdV)</td>
<td align="left">Hexon protein</td>
</tr>
<tr>
<td align="left">Anti-HPIV1-1, 2</td>
<td align="left">Human parainfluenza virus 1 (HPIV1)</td>
<td align="left">Nucleocapsid protein</td>
</tr>
<tr>
<td align="left">Anti-HPIV2-1, 2</td>
<td align="left">Human parainfluenza virus 2 (HPIV2)</td>
<td align="left">Nucleocapsid protein</td>
</tr>
<tr>
<td align="left">Anti-HPIV3-1, 2</td>
<td align="left">Human parainfluenza virus 3 (HPIV3)</td>
<td align="left">Nucleocapsid protein</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s2-3">
<title>Synthesis of Au@Pt nanozyme</title>
<p>Platinum-decorated Au@Pt nanozyme (Au@Pt NPs) was synthesized as described in a previous study (<xref ref-type="bibr" rid="B23">Wu et al., 2022</xref>). In brief, 15-nm gold NPs were used as the seed and mixed with 190&#xa0;mL of purified water, followed by the addition of 4&#xa0;mL of PVP (20% w/v). This solution was mixed strongly for 2&#xa0;min so that the polymer could coat and stabilize the AuNP seeds; then, 8&#xa0;mL of L-ascorbic acid (10% w/v) was added to the solution and mixed for 1&#xa0;min. Next, approximately 1600&#xa0;&#x3bc;L of chloroplatinic acid hydrate (0.5&#xa0;M) was added to the mixture and mixed for 1&#xa0;min; this solution was immediately heated to 65&#xb0;C in an oil bath without stirring for 30&#xa0;min until its color turned brown/black. The synthesized Au@Pt NPs were cooled to room temperature, purified by centrifugation (15&#xa0;min, 14,000<italic>g</italic>), and resuspended in distilled water three times. Finally, Au@Pt NPs of size 75&#xa0;nm were synthesized.</p>
</sec>
<sec id="s2-4">
<title>Preparation of nanozyme&#x2013;antibody conjugates</title>
<p>In this study, antibodies were allowed to form coordination bonds with sulfur groups that were attached to the surfaces of the Au@Pt NPs. Briefly, 10&#xa0;mg of DTT was dissolved per milliliter of water, and this solution was added to each labeling antibody at a concentration of 25&#xa0;&#x3bc;L/mg. The mixtures were then incubated at 4&#xb0;C for 30&#xa0;min, following which the excess DTT was removed by ultrafiltration centrifugation using 20&#xa0;mM sodium phosphate buffer. The modified L-mAbs should be used immediately in conjugation reactions. Next, 100&#xa0;&#x3bc;L of 75&#xa0;nm Au@Pt NPs (2.5&#xa0;nM) was mixed with 400&#xa0;&#x3bc;L of 20&#xa0;mM sodium phosphate buffer, followed by addition of 54&#xa0;&#x3bc;g of modified L-mAbs; this mixture was incubated for 2&#xa0;h using gentle rotations at room temperature. The modified particles were subsequently blocked using 200&#xa0;&#x3bc;L of the blocking solution (phosphate buffer containing 1&#xa0;wt% casein block and 1&#xa0;wt% glutathione) for 30&#xa0;min with gentle rotations at room temperature. The excess reagents were removed through three washing steps by centrifugation (15&#xa0;min, 14,000<italic>g</italic>) using 20&#xa0;mM sodium phosphate buffer. Finally, the Au@Pt NPs-mAbs were resuspended in a storage buffer at a concentration of 500 p.m.</p>
</sec>
<sec id="s2-5">
<title>Antibody functionalization of MBs</title>
<p>Antibody-functionalized MBs were prepared in accordance with the streptavidin&#x2013;biotin system, and streptavidin-conjugated MBs were prepared according to the EDC/NHS method. Briefly, 100&#xa0;mg of carboxyl-functionalized MBs were separated using a magnet for 1&#xa0;min and washed with MES buffer three times before being activated by 2&#xa0;mM sulfo-NHS and 5&#xa0;mM EDC for 30&#xa0;min at 37&#xb0;C with gentle rotations. The activated MBs were separated using a magnet, washed with MES buffer three times, and redispersed in 50&#xa0;mM borate buffer to react with 1.5&#xa0;mg streptavidin for 3&#xa0;h at 37&#xb0;C with gentle rotations. The residual active coupling sites or non-specific binding sites were blocked with a blocking solution for 30&#xa0;min at 37&#xb0;C, and the streptavidin-coated MBs were finally washed four times with 20&#xa0;mM sodium phosphate buffer. Biotinylation of each coated antibody (C-mAb) was performed. Briefly, C-mAbs underwent dialysis against phosphate-buffered saline (PBS) and was diluted to a concentration of 2&#xa0;mg/mL. Then, sulfo-NHS-LC-biotin was dissolved in DMSO at a concentration of 10&#xa0;mM, and approximately 13.5&#xa0;&#x3bc;L of the sulfo-NHS-LC-biotin solution was added to 1&#xa0;mg of the C-mAbs solution and reacted for 24&#xa0;h at 4&#xb0;C. The unreacted biotinylation reagent and byproducts were removed by dialysis against PBS for 24&#xa0;h at 4&#xb0;C to purify the biotinylated antibodies. Then, the streptavidin-coated MBs and 0.3&#xa0;mg of the biotinylated antibodies in PBS were incubated for 1&#xa0;h at room temperature with gentle rotations. The antibody-coated MBs were separated using a magnet and washed four times using 20&#xa0;mM sodium phosphate buffer. Finally, the MBs-streptavidin-mAbs were resuspended in phosphate buffer with 1&#xa0;wt% BSA.</p>
</sec>
<sec id="s2-6">
<title>Preparation of multiplexed microfluidic immunoassay chips</title>
<p>The microfluidic chips were designed using AutoCAD 2019 and fabricated as described in a previous study (<xref ref-type="bibr" rid="B23">Wu et al., 2022</xref>). The structure of the multiplexed microfluidic immunoassay chip is shown in <xref ref-type="fig" rid="F1">Figure 1A</xref> and consists of one sample Luer inlet port at the middle (white loop) surrounded by eight reaction Luer ports (yellow loop) and eight Luer outlet ports (red loop). There is a wash chamber (green loop) in each path between the reaction Luer port and outlet port. The inlet and outlet ports are connected to the chamber by channels of 1000&#xa0;&#x3bc;m width, and a height of 100&#xa0;&#x3bc;m was considered for the chamber. The structural overview of the microfluidic chip is given in <xref ref-type="fig" rid="F1">Figure 1B</xref>.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Schematic illustrations of the multiplexed microfluidic immunoassay chip: <bold>(A)</bold> AutoCAD layout of the microchannel structure; <bold>(B)</bold> top structural view of the microfluidic chip.</p>
</caption>
<graphic xlink:href="fbioe-12-1402831-g001.tif"/>
</fig>
</sec>
<sec id="s2-7">
<title>Analytical procedure</title>
<p>For the immunoassay preparation, each respiratory-virus-related nanozyme&#x2013;antibody conjugate (Au@Pt NPs-mAbs) and antibody-functionalized-MBs (MBs-streptavidin-mAbs) were added to the corresponding reaction Luer ports of the microfluidic chip and freeze-dried overnight in vacuum. Upon removal from the freeze-dryer, the chips were stored in a sealed plastic bag filled with silica bead desiccant at room temperature. The two selected antibodies used in the formulation of the nanozyme&#x2013;antibody conjugate (Au@Pt NPs-mAb) and antibody-functionalized-MBs (MBs-streptavidin-mAb) were designed to specifically recognize the same antigen protein of each virus. <xref ref-type="fig" rid="F2">Figure 2</xref> shows the formation of the sandwich immunoassay and its colorimetric formation.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Schematic representation of the colorimetric formation of the sandwich immunoassay.</p>
</caption>
<graphic xlink:href="fbioe-12-1402831-g002.tif"/>
</fig>
<p>The test procedure begins with placing the chip on the magnet, followed by addition of 400 &#xb5;L of the standard protein solution or sample lysate into the sample Luer inlet port; then, the T-type silicone rubber plug is placed over the inlet and pressed till it touches the bottom. The samples are equally distributed to the eight reaction Luer ports, where the freeze-dried Au@Pt NPs-mAbs and MBs-streptavidin-mAbs recognize and bind with the antigen proteins in the samples to form a sandwich structure. After incubation for 30&#xa0;min, T-type silicone rubber plugs are placed over each of the reaction Luer ports and pressed to sufficiently push the reaction mixture toward the wash chamber, where the MBs-complex is isolated from the reaction mixture by the magnet. Next, absorbent paper is placed in the eight Luer outlet ports, and approximately 600&#xa0;&#xb5;L of the wash buffer is injected from the sample Luer inlet port using a syringe to wash the MBs-complex, followed by removing the magnet and absorbent paper. Finally, 400 &#xb5;L of the one-step TMB substrate solution is injected from the sample Luer inlet port using a syringe, and the results are detected after incubation for 1&#x2013;10&#xa0;min. Usually, the analytical procedure is completed within 40&#xa0;min. The TMB substrate solution flushes the MBs-complex in the wash chamber into the Luer outlet port to react with the captured Au@Pt NPs and develop color. These developed colors can be conveniently examined and judged visually, or the mixture can be transferred to a microwell plate for absorbance detection at 630&#xa0;nm using a microplate reader.</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<sec id="s3-1">
<title>Properties of antigen-specific monoclonal antibodies</title>
<p>The monoclonal antibodies used in this study were screened, expressed, and purified in the lab. Two antigen-specific antibodies with high affinity were selected for each virus. The binding capacities of these antibodies with their antigens were detected by indirect ELISA, and the results are shown in <xref ref-type="fig" rid="F3">Figure 3</xref>. These antibodies were purified in a high titer and can recognize their antigens even at low concentrations, showing their sensitivity and potential for viral antigen detection.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Antibody&#x2013;antigen binding and titer identification of mAbs against eight types of respiratory viruses. Two specific antibodies were selected and detected by indirect ELISA for each virus: <bold>(A)</bold> influenza A virus, <bold>(B)</bold> influenza B virus, <bold>(C)</bold> respiratory syncytial virus, <bold>(D)</bold> SARS-CoV-2, <bold>(E)</bold> human bocavirus, <bold>(F)</bold> human metapneumovirus, <bold>(G)</bold> human parainfluenza virus 1, <bold>(H)</bold> human parainfluenza virus 2, <bold>(I)</bold> human parainfluenza virus 3, and <bold>(J)</bold> adenovirus. n &#x3d; 3 biological replicates. The data are mean &#xb1; SEM.</p>
</caption>
<graphic xlink:href="fbioe-12-1402831-g003.tif"/>
</fig>
</sec>
<sec id="s3-2">
<title>Properties of Au@Pt NPs</title>
<p>The Au@Pt NPs were prepared with controlled sizes. The color of the platinum-decorated Au NPs changed from red (<xref ref-type="fig" rid="F4">Figure 4A</xref>) to dark brown (<xref ref-type="fig" rid="F4">Figure 4B</xref>) after heat treatment. Then, these Au@Pt NPs were investigated using transmission electron microscopy (TEM) for their structure and size (<xref ref-type="fig" rid="F4">Figure 4C</xref>). The average size of Au@Pt NPs was further detected by dynamic light scattering (DLS) and was found to be approximately 98.27&#xa0;nm (<xref ref-type="fig" rid="F4">Figure 4D</xref>).</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Properties of Au@Pt NPs. Images of Au@Pt NP reaction components <bold>(A)</bold> before and <bold>(B)</bold> after heat treatment. <bold>(C)</bold> TEM images of Au@Pt NPs. Scale bar, 100&#xa0;nm. <bold>(D)</bold> Nanoparticle size detection by dynamic light scattering (DLS) experiments.</p>
</caption>
<graphic xlink:href="fbioe-12-1402831-g004.tif"/>
</fig>
</sec>
<sec id="s3-3">
<title>Properties of multiplexed microfluidic immunoassay chips</title>
<p>This multiplexed microfluidic immunoassay chip was designed for the simultaneous detection of eight respiratory viruses, namely, influenza A virus, influenza B virus, RSV, SARS-CoV-2, HBoV, HMPV, AdV, and HPIVs. The sensitivity of this chip was determined by testing recombinant protein standard samples at concentrations of 0.01&#x2013;1000&#xa0;pg/mL. The results of these standard samples could be inferred visually and also measured using a microplate reader at an absorbance of 630&#xa0;nm. With the help of the nanozyme, the differential color intensity between the limit concentration and negative control was easily distinguishable via healthy color vision. As shown in <xref ref-type="fig" rid="F5">Figure 5</xref>, the color intensity of the 0.1&#xa0;pg/mL protein could be distinguished from the negative control visually. For detection with the microplate reader, the test limit concentration of each protein was as low as 0.1&#xa0;pg/mL (<xref ref-type="fig" rid="F6">Figure 6</xref>). These data indicate that the multiplexed microfluidic immunoassay chip can conveniently detect the eight viruses with high sensitivity.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Images of multiplexed microfluidic immunoassay chip detection of different protein concentrations at <bold>(A)</bold> 0, <bold>(B)</bold> 0.1, and <bold>(C)</bold> 100&#xa0;pg/mL. The positive results are shown in blue at the Luer outlet ports.</p>
</caption>
<graphic xlink:href="fbioe-12-1402831-g005.tif"/>
</fig>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>Analytical performance of the multiplexed microfluidic immunoassay chip for detecting the proteins of eight viruses, with absorbance intensities obtained at different protein concentrations ranging from 0.01 to 1000&#xa0;pg/mL. n &#x3d; 3 biological replicates. The data are mean &#xb1; SEM.</p>
</caption>
<graphic xlink:href="fbioe-12-1402831-g006.tif"/>
</fig>
</sec>
<sec id="s3-4">
<title>Specificity of multiplexed microfluidic immunoassay chip</title>
<p>The specificity and cross reactivity of the multiplexed microfluidic immunoassay chip was analyzed by detecting the conserved nucleocapsid proteins of the influenza A virus (subtype H1N1), influenza B virus (subtype Yamagata strain), RSV (Long strain), SARS-CoV-2 (B.1.1.529 BA.1 and omicron strains), HMPV, HPIVs (subtypes 1, 2, 3, and 4), VP1 protein of HBoV, and HP protein of AdV. These proteins of each virus were mixed for detection; as shown in <xref ref-type="fig" rid="F7">Figure 7</xref>, the multiplexed microfluidic immunoassay chip could detect each virus specifically without cross reactivity with the other seven viruses. Furthermore, all eight respiratory pathogens were detected successfully, demonstrating that the multiplexed microfluidic immunoassay chip could detect these viruses with high sensitivity and specificity.</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>Cross reactions between the eight respiratory pathogens. Approximately 40&#xa0;pg of protein from each virus in 400&#xa0;&#x3bc;L of solution (100&#xa0;pg/mL) was injected into the sample Luer inlet port at the middle, and the results were observed at the Luer outlet ports. The 1&#x2013;8 Luer outlet ports of each chip show the detection results of influenza A virus (Luer 1), influenza B virus (Luer 2), respiratory syncytial virus (Luer 3), SARS-CoV-2 (Luer 4), human bocavirus (Luer 5), human metapneumovirus (Luer 6), human adenovirus (Luer 7), and human parainfluenza viruses (Luer 8). The positive results are shown in blue.</p>
</caption>
<graphic xlink:href="fbioe-12-1402831-g007.tif"/>
</fig>
</sec>
<sec id="s3-5">
<title>Sample test</title>
<p>The studies involving human samples were reviewed and approved by the Bioethics Committee (BEC) of Tsinghua Shenzhen International Graduate School. In this study, human throat swab samples (n &#x3d; 315) were collected from Shenzhen Children&#x2019;s Hospital and were diagnosed by real-time RT-PCR/PCR, whose results are shown in <xref ref-type="table" rid="T2">Table 2</xref>. These samples were inactivated before testing with the multiplexed microfluidic immunoassay chip. Before detection, approximately 300&#xa0;&#x3bc;L of the human throat swab sample and 300&#xa0;&#xb5;L of the lysis buffer (PBS containing 0.5% NP40, 0.2% Tween 20%, and 0.2% LNAC, pH 7.4) were mixed and incubated for 1&#xa0;min, and the lysate was directly tested using the microfluidic chip immunoassay. As shown in <xref ref-type="table" rid="T2">Table 2</xref>, the multiplexed microfluidic immunoassay chip could efficiently recognize all eight respiratory viruses in the throat swab samples. Compared with the results of the real-time RT-PCR assay, the microfluidic chip immunoassay had accuracies of 100%, 96.5%, 100%, 100%, 96%, 96%, 96.5%, and 92% for the detection of influenza A virus, influenza B virus, RSV, SARS-CoV-2, HBoV, HMPV, AdV, and HPIVs, respectively. The positive coincidence rate between the multi respiratory virus microfluidic immunoassay and real-time RT-PCR results was 97.2%, negative coincidence rate was 94.3%, and total coincidence rate was 98.1%.</p>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>Sample testing results from the multiplexed microfluidic immunoassay chip and real-time RT-PCR/PCR.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Respiratory virus</th>
<th align="center">Number of samples</th>
<th align="center">Microfluidic chip immunoassay (P/N)</th>
<th align="center">Real-time RT-PCR/PCR (P/N)</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Influenza A</td>
<td align="center" style="color:#131413">30</td>
<td align="center" style="color:#131413">30/0</td>
<td align="center" style="color:#131413">30/0</td>
</tr>
<tr>
<td align="left">Influenza B</td>
<td align="center" style="color:#131413">30</td>
<td align="center" style="color:#131413">29/1</td>
<td align="center" style="color:#131413">30/0</td>
</tr>
<tr>
<td align="left">RSV</td>
<td align="center" style="color:#131413">30</td>
<td align="center" style="color:#131413">30/0</td>
<td align="center" style="color:#131413">30/0</td>
</tr>
<tr>
<td align="left">SARS-CoV-2</td>
<td align="center" style="color:#131413">20</td>
<td align="center" style="color:#131413">20/0</td>
<td align="center" style="color:#131413">20/0</td>
</tr>
<tr>
<td align="left">HBoV</td>
<td align="center" style="color:#131413">25</td>
<td align="center" style="color:#131413">24/1</td>
<td align="center" style="color:#131413">25/0</td>
</tr>
<tr>
<td align="left">HMPV</td>
<td align="center" style="color:#131413">25</td>
<td align="center" style="color:#131413">24/1</td>
<td align="center" style="color:#131413">25/0</td>
</tr>
<tr>
<td align="left">AdV</td>
<td align="center" style="color:#131413">30</td>
<td align="center" style="color:#131413">29/1</td>
<td align="center" style="color:#131413">30/0</td>
</tr>
<tr>
<td align="left">HPIV</td>
<td align="center" style="color:#131413">25</td>
<td align="center" style="color:#131413">23/2</td>
<td align="center" style="color:#131413">25/0</td>
</tr>
<tr>
<td align="left">Negative sample</td>
<td align="center" style="color:#131413">100</td>
<td align="center" style="color:#131413">0/100</td>
<td align="center" style="color:#131413">0/100</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
</sec>
<sec id="s4">
<title>Discussion and conclusion</title>
<p>Given the diversity of viruses involved in acute respiratory tract infections and similarities between the clinical symptoms caused by different pathogens, it is difficult and insufficient to make judgments based on clinical manifestations and chest imaging (<xref ref-type="bibr" rid="B14">Lim et al., 2006</xref>). However, there are significant differences in the pathological course and treatment for different respiratory viruses. Therefore, it is of great significance to rapidly and accurately diagnose and identify pathogens to help determine their clinical treatments. Thus, numerous studies have been performed to develop multiplexed detection methods for diagnosing pathogens, especially in multiplexed infections cases (<xref ref-type="bibr" rid="B3">Chung et al., 2021</xref>; <xref ref-type="bibr" rid="B1">Banerjee et al., 2022</xref>). However, it is difficult for these assays based on nuclei acids to detect RNA or DNA viruses simultaneously, such as the DNA viruses like AdV and HBoV along with RNA viruses like the influenza viruses and HPIVs.</p>
<p>In the present study, nanozyme was combined with microfluidic technology to establish a simple and visual rapid detection technology for multiple respiratory viruses. The platinum-decorated Au nanozyme (Au@Pt NPs) that was previously designed and successfully used for SARS-CoV-2 detection was applied to improve the sensitivity of the multiplexed microfluidic immunoassay chip (<xref ref-type="bibr" rid="B23">Wu et al., 2022</xref>). The LOD could be decreased significantly to 0.1&#xa0;pg/mL to enable visual detection, which was convenient for the early diagnosis of infections. This is important because infection by respiratory viruses show very low titer values at the early stages in some varieties, which may result in imprecise diagnoses. Significantly, the multiplexed microfluidic immunoassay chip could simultaneously determine eight pathogens through eight non-interfering microfluidic paths, rendering the diagnosis more accurate. The antibodies used in this study were against conserved proteins of the viruses to ensure detection of all subtypes of each virus and their mutants, such as the influenza viruses A and B, achieving sufficient diagnoses for multiple viruses. This detection was achieved within 40&#xa0;min, which greatly improved the effectiveness and provided a new scheme for rapid and sensitive detection of respiratory viruses.</p>
<p>In summary, a multiplexed microfluidic rapid detection method based on nanozymes is proposed for diagnosing multiple respiratory viruses, and this method can be widely used to detect pathogens and biomarkers by replicating antigen-specific antibodies, which provide technical support for the development of point-of-care testing.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s5">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/supplementary material; further inquiries can be directed to the corresponding authors.</p>
</sec>
<sec id="s6">
<title>Ethics statement</title>
<p>The studies involving humans were approved by the Bioethics Committee (BEC) of Tsinghua Shenzhen International Graduate School. The studies were conducted in accordance with the local legislations and institutional requirements. Written informed consent for participation in this study was provided by the participants&#x2019; legal guardians/next of kin. No potentially identifiable images or data are presented in this study.</p>
</sec>
<sec id="s7">
<title>Author contributions</title>
<p>FW: writing&#x2013;original draft and writing&#x2013;review and editing. DC: writing&#x2013;original draft. XS: writing&#x2013;original draft. PL: writing&#x2013;original draft and writing&#x2013;review and editing. LM: writing&#x2013;original draft and writing&#x2013;review and editing.</p>
</sec>
<sec sec-type="funding-information" id="s8">
<title>Funding</title>
<p>The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This work was supported by the Shenzhen Science and Technology Research and Development Funds (No. JCYJ20200109143018683) and the State Key Laboratory of Chemical Oncogenomics of the Institute of Biomedical Health Technology and Engineering at Shenzhen Bay Laboratory.</p>
</sec>
<sec sec-type="COI-statement" id="s9">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors, and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Banerjee</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Hassan</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Avadhanula</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Piedra</surname>
<given-names>P. A.</given-names>
</name>
<name>
<surname>Boom</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Sahni</surname>
<given-names>L. C.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Comparative analysis of three multiplex platforms for the detection of respiratory viral pathogens</article-title>. <source>J. Clin. Virol.</source> <volume>156</volume>, <fpage>105274</fpage>. <pub-id pub-id-type="doi">10.1016/j.jcv.2022.105274</pub-id>
</citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Castrej&#xf3;n-Jim&#xe9;nez</surname>
<given-names>N. S.</given-names>
</name>
<name>
<surname>Garc&#xed;a-P&#xe9;rez</surname>
<given-names>B. E.</given-names>
</name>
<name>
<surname>Reyes-Rodr&#xed;guez</surname>
<given-names>N. E.</given-names>
</name>
<name>
<surname>Vega-S&#xe1;nchez</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Mart&#xed;nez-Ju&#xe1;rez</surname>
<given-names>V. M.</given-names>
</name>
<name>
<surname>Hern&#xe1;ndez-Gonz&#xe1;lez</surname>
<given-names>J. C.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Challenges in the detection of SARS-CoV-2: evolution of the lateral flow immunoassay as a valuable tool for viral diagnosis</article-title>. <source>Biosensors</source> <volume>12</volume>, <fpage>728</fpage>. <pub-id pub-id-type="doi">10.3390/bios12090728</pub-id>
</citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chung</surname>
<given-names>H. Y.</given-names>
</name>
<name>
<surname>Jian</surname>
<given-names>M. J.</given-names>
</name>
<name>
<surname>Chang</surname>
<given-names>C. K.</given-names>
</name>
<name>
<surname>Lin</surname>
<given-names>J. C.</given-names>
</name>
<name>
<surname>Yeh</surname>
<given-names>K. M.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>C. W.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system</article-title>. <source>Emerg. Microbes Infect.</source> <volume>10</volume>, <fpage>161</fpage>&#x2013;<lpage>166</lpage>. <pub-id pub-id-type="doi">10.1080/22221751.2021.1873073</pub-id>
</citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Corman</surname>
<given-names>V. M.</given-names>
</name>
<name>
<surname>Landt</surname>
<given-names>O.</given-names>
</name>
<name>
<surname>Kaiser</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Molenkamp</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Meijer</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Chu</surname>
<given-names>D. K.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR</article-title>. <source>Eurosurveillance</source> <volume>25</volume>, <fpage>2000045</fpage>. <pub-id pub-id-type="doi">10.2807/1560-7917.Es.2020.25.3.2000045</pub-id>
</citation>
</ref>
<ref id="B5">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dhanasekaran</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Sullivan</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Edwards</surname>
<given-names>K. M.</given-names>
</name>
<name>
<surname>Xie</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Khvorov</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Valkenburg</surname>
<given-names>S. A.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Human seasonal influenza under COVID-19 and the potential consequences of influenza lineage elimination</article-title>. <source>Nat. Commun.</source> <volume>13</volume>, <fpage>1721</fpage>. <pub-id pub-id-type="doi">10.1038/s41467-022-29402-5</pub-id>
</citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Diseases</surname>
<given-names>G. B. D.</given-names>
</name>
<name>
<surname>Injuries</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Abbafati</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Abbas</surname>
<given-names>K. M.</given-names>
</name>
<name>
<surname>Abbasi</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Abbasifard</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Global burden of 369 diseases and injuries in 204 countries and territories, 1990-2019: a systematic analysis for the Global Burden of Disease Study 2019</article-title>. <source>Lancet</source> <volume>396</volume>, <fpage>1204</fpage>&#x2013;<lpage>1222</lpage>. <pub-id pub-id-type="doi">10.1016/S0140-6736(20)30925-9</pub-id>
</citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Filchakova</surname>
<given-names>O.</given-names>
</name>
<name>
<surname>Dossym</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Ilyas</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kuanysheva</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Abdizhamil</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Bukasov</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Review of COVID-19 testing and diagnostic methods</article-title>. <source>Talanta</source> <volume>244</volume>, <fpage>123409</fpage>. <pub-id pub-id-type="doi">10.1016/j.talanta.2022.123409</pub-id>
</citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gao</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Ye</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Tang</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Tao</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Habibi</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Minerick</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Platinum-decorated gold nanoparticles with dual functionalities for ultrasensitive colorimetric <italic>in vitro</italic> diagnostics</article-title>. <source>Nano Lett.</source> <volume>17</volume>, <fpage>5572</fpage>&#x2013;<lpage>5579</lpage>. <pub-id pub-id-type="doi">10.1021/acs.nanolett.7b02385</pub-id>
</citation>
</ref>
<ref id="B9">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gaston David</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Miller</surname>
<given-names>H. B.</given-names>
</name>
<name>
<surname>Fissel</surname>
<given-names>J. A.</given-names>
</name>
<name>
<surname>Jacobs</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Gough</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Evaluation of metagenomic and targeted next-generation sequencing workflows for detection of respiratory pathogens from bronchoalveolar lavage fluid specimens</article-title>. <source>J. Clin. Microbiol.</source> <volume>60</volume>, <fpage>e00526</fpage>&#x2013;<lpage>e00522</lpage>. <pub-id pub-id-type="doi">10.1128/jcm.00526-22</pub-id>
</citation>
</ref>
<ref id="B10">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Goto</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Fukunari</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Tada</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Ichimura</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Chiba</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Suzuki</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2023</year>). <article-title>A multiplex real-time RT-PCR system to simultaneously diagnose 16 pathogens associated with swine respiratory disease</article-title>. <source>J. Appl. Microbiol.</source> <volume>134</volume>, <fpage>lxad263</fpage>. <pub-id pub-id-type="doi">10.1093/jambio/lxad263</pub-id>
</citation>
</ref>
<ref id="B11">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Haney</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Vijayakrishnan</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Streetley</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Dee</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Goldfarb</surname>
<given-names>D. M.</given-names>
</name>
<name>
<surname>Clarke</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Coinfection by influenza A virus and respiratory syncytial virus produces hybrid virus particles</article-title>. <source>Nat. Microbiol.</source> <volume>7</volume>, <fpage>1879</fpage>&#x2013;<lpage>1890</lpage>. <pub-id pub-id-type="doi">10.1038/s41564-022-01242-5</pub-id>
</citation>
</ref>
<ref id="B12">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jiang</surname>
<given-names>X. W.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>T. S.</given-names>
</name>
<name>
<surname>Xie</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>S. Z.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>S. D.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>Z. W.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Development of a diagnostic assay by three-tube multiplex real-time PCR for simultaneous detection of nine microorganisms causing acute respiratory infections</article-title>. <source>Sci. Rep.</source> <volume>12</volume>, <fpage>13306</fpage>. <pub-id pub-id-type="doi">10.1038/s41598-022-15543-6</pub-id>
</citation>
</ref>
<ref id="B13">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lee</surname>
<given-names>C. W.</given-names>
</name>
<name>
<surname>Suarez</surname>
<given-names>D. L.</given-names>
</name>
</person-group> (<year>2004</year>). <article-title>Application of real-time RT-PCR for the quantitation and competitive replication study of H5 and H7 subtype avian influenza virus</article-title>. <source>J. Virol. Methods</source> <volume>119</volume>, <fpage>151</fpage>&#x2013;<lpage>158</lpage>. <pub-id pub-id-type="doi">10.1016/s0166-0934(04)00115-6</pub-id>
</citation>
</ref>
<ref id="B14">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lim</surname>
<given-names>Y. W.</given-names>
</name>
<name>
<surname>Steinhoff</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Girosi</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Holtzman</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Campbell</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Boer</surname>
<given-names>R.</given-names>
</name>
<etal/>
</person-group> (<year>2006</year>). <article-title>Reducing the global burden of acute lower respiratory infections in children: the contribution of new diagnostics</article-title>. <source>Nature</source> <volume>444</volume> (<issue>Suppl. 1</issue>), <fpage>9</fpage>&#x2013;<lpage>18</lpage>. <pub-id pub-id-type="doi">10.1038/nature05442</pub-id>
</citation>
</ref>
<ref id="B15">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lin</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Ji</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Ma</surname>
<given-names>L.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Conserved sequence analysis of influenza A virus ha segment and its application in rapid typing</article-title>. <source>Diagnostics</source> <volume>11</volume>, <fpage>1328</fpage>. <pub-id pub-id-type="doi">10.3390/diagnostics11081328</pub-id>
</citation>
</ref>
<ref id="B16">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Loynachan</surname>
<given-names>C. N.</given-names>
</name>
<name>
<surname>Thomas</surname>
<given-names>M. R.</given-names>
</name>
<name>
<surname>Gray</surname>
<given-names>E. R.</given-names>
</name>
<name>
<surname>Richards</surname>
<given-names>D. A.</given-names>
</name>
<name>
<surname>Kim</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Miller</surname>
<given-names>B. S.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Platinum nanocatalyst amplification: redefining the gold standard for lateral flow immunoassays with ultrabroad dynamic range</article-title>. <source>ACS Nano</source> <volume>12</volume>, <fpage>279</fpage>&#x2013;<lpage>288</lpage>. <pub-id pub-id-type="doi">10.1021/acsnano.7b06229</pub-id>
</citation>
</ref>
<ref id="B17">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pigny</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Wagner</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Rohr</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Mamin</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Cherpillod</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Posfay-Barbe</surname>
<given-names>K. M.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Viral co-infections among SARS-CoV-2-infected children and infected adult household contacts</article-title>. <source>Eur. J. Pediatr.</source> <volume>180</volume>, <fpage>1991</fpage>&#x2013;<lpage>1995</lpage>. <pub-id pub-id-type="doi">10.1007/s00431-021-03947-x</pub-id>
</citation>
</ref>
<ref id="B18">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ramos</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Panzera</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Frabasile</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Tom&#xe1;s</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Calleros</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Marandino</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>A multiplex-NGS approach to identifying respiratory RNA viruses during the COVID-19 pandemic</article-title>. <source>Archives Virology</source> <volume>168</volume>, <fpage>87</fpage>. <pub-id pub-id-type="doi">10.1007/s00705-023-05717-6</pub-id>
</citation>
</ref>
<ref id="B19">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ren</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Cai</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Fang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Damiani</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2023</year>). <article-title>Multiplexed detection of viral antigen and RNA using nanopore sensing and encoded molecular probes</article-title>. <source>Nat. Commun.</source> <volume>14</volume>, <fpage>7362</fpage>. <pub-id pub-id-type="doi">10.1038/s41467-023-43004-9</pub-id>
</citation>
</ref>
<ref id="B20">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Renois</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Talmud</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Huguenin</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Moutte</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Strady</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Cousson</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2010</year>). <article-title>Rapid detection of respiratory tract viral infections and coinfections in patients with influenza-like illnesses by use of reverse transcription-PCR DNA microarray systems</article-title>. <source>J. Clin. Microbiol.</source> <volume>48</volume>, <fpage>3836</fpage>&#x2013;<lpage>3842</lpage>. <pub-id pub-id-type="doi">10.1128/JCM.00733-10</pub-id>
</citation>
</ref>
<ref id="B21">
<citation citation-type="book">
<collab>WHO</collab> (<year>2009</year>). <source>Infection-control measures for health care of patients with acute respiratory diseases in community settings: trainee&#x27;s guide</source>.</citation>
</ref>
<ref id="B22">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wrasman</surname>
<given-names>C. J.</given-names>
</name>
<name>
<surname>Boubnov</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Riscoe</surname>
<given-names>A. R.</given-names>
</name>
<name>
<surname>Hoffman</surname>
<given-names>A. S.</given-names>
</name>
<name>
<surname>Bare</surname>
<given-names>S. R.</given-names>
</name>
<name>
<surname>Cargnello</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Synthesis of colloidal Pd/Au dilute alloy nanocrystals and their potential for selective catalytic oxidations</article-title>. <source>J. Am. Chem. Soc.</source> <volume>140</volume>, <fpage>12930</fpage>&#x2013;<lpage>12939</lpage>. <pub-id pub-id-type="doi">10.1021/jacs.8b07515</pub-id>
</citation>
</ref>
<ref id="B23">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wu</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Mao</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Cai</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Lin</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Guan</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Shi</surname>
<given-names>X.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>Platinum-decorated gold nanoparticle-based microfluidic chip immunoassay for ultrasensitive colorimetric detection of SARS-CoV-2 nucleocapsid protein</article-title>. <source>ACS Biomaterials Sci. Eng.</source> <volume>8</volume>, <fpage>3924</fpage>&#x2013;<lpage>3932</lpage>. <pub-id pub-id-type="doi">10.1021/acsbiomaterials.2c00600</pub-id>
</citation>
</ref>
<ref id="B24">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yelagandula</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Bykov</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Vogt</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Heinen</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>&#xd6;zkan</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Strobl</surname>
<given-names>M. M.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Multiplexed detection of SARS-CoV-2 and other respiratory infections in high throughput by SARSeq</article-title>. <source>Nat. Commun.</source> <volume>12</volume>, <fpage>3132</fpage>. <pub-id pub-id-type="doi">10.1038/s41467-021-22664-5</pub-id>
</citation>
</ref>
<ref id="B25">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>You</surname>
<given-names>H.-L.</given-names>
</name>
<name>
<surname>Chang</surname>
<given-names>S. J.</given-names>
</name>
<name>
<surname>Yu</surname>
<given-names>H. R.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>C. C.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>C. H.</given-names>
</name>
<name>
<surname>Liao</surname>
<given-names>W. T.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Simultaneous detection of respiratory syncytial virus and human metapneumovirus by one-step multiplex real-time RT-PCR in patients with respiratory symptoms</article-title>. <source>BMC Pediatr.</source> <volume>17</volume>, <fpage>89</fpage>. <pub-id pub-id-type="doi">10.1186/s12887-017-0843-7</pub-id>
</citation>
</ref>
<ref id="B26">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Guo</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2024</year>). <article-title>One-pot synthesized Au@Pt nanostars-based lateral flow immunoassay for colorimetric and photothermal dual-mode detection of SARS-CoV-2 nucleocapsid antibody</article-title>. <source>Anal. Chim. Acta</source> <volume>1292</volume>, <fpage>342241</fpage>. <pub-id pub-id-type="doi">10.1016/j.aca.2024.342241</pub-id>
</citation>
</ref>
</ref-list>
</back>
</article>