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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Bioeng. Biotechnol.</journal-id>
<journal-title>Frontiers in Bioengineering and Biotechnology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Bioeng. Biotechnol.</abbrev-journal-title>
<issn pub-type="epub">2296-4185</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">744197</article-id>
<article-id pub-id-type="doi">10.3389/fbioe.2021.744197</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Bioengineering and Biotechnology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Non-Destructive Spatial Mapping of Glycosaminoglycan Loss in Native and Degraded Articular Cartilage Using Confocal Raman Microspectroscopy</article-title>
<alt-title alt-title-type="left-running-head">Gao et&#x20;al.</alt-title>
<alt-title alt-title-type="right-running-head">Cartilage Imaging Using Raman Microspectroscopy</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Gao</surname>
<given-names>Tianyu</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1403245/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Boys</surname>
<given-names>Alexander J.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1045934/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Zhao</surname>
<given-names>Crystal</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chan</surname>
<given-names>Kiara</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1470356/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Estroff</surname>
<given-names>Lara A.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/338057/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Bonassar</surname>
<given-names>Lawrence J.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<label>
<sup>1</sup>
</label>Department of Materials Science and Engineering, Cornell University, <addr-line>Ithaca</addr-line>, <addr-line>NY</addr-line>, <country>United&#x20;States</country>
</aff>
<aff id="aff2">
<label>
<sup>2</sup>
</label>Sibley School of Mechanical and Aerospace Engineering, Cornell University, <addr-line>Ithaca</addr-line>, <addr-line>NY</addr-line>, <country>United&#x20;States</country>
</aff>
<aff id="aff3">
<label>
<sup>3</sup>
</label>Kavli Institute at Cornell for Nanoscale Science, <addr-line>Ithaca</addr-line>, <addr-line>NY</addr-line>, <country>United&#x20;States</country>
</aff>
<aff id="aff4">
<label>
<sup>4</sup>
</label>Meinig School of Biomedical Engineering, Cornell University, <addr-line>Ithaca</addr-line>, <addr-line>NY</addr-line>, <country>United&#x20;States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1186979/overview">Tammy Haut Donahue</ext-link>, University of Massachusetts Amherst, United&#x20;States</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/120212/overview">Thierry Hoc</ext-link>, Ecole Centrale de Lyon, France</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/848958/overview">Amin Komeili</ext-link>, University of Guelph, Canada</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Lawrence J.&#x20;Bonassar, <email>lb244@cornell.edu</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Biomechanics, a section of the journal Frontiers in Bioengineering and Biotechnology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>28</day>
<month>10</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>9</volume>
<elocation-id>744197</elocation-id>
<history>
<date date-type="received">
<day>19</day>
<month>07</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>24</day>
<month>09</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Gao, Boys, Zhao, Chan, Estroff and Bonassar.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Gao, Boys, Zhao, Chan, Estroff and Bonassar</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these&#x20;terms.</p>
</license>
</permissions>
<abstract>
<p>Articular cartilage is a collagen-rich tissue that provides a smooth, lubricated surface for joints and is also responsible for load bearing during movements. The major components of cartilage are water, collagen, and proteoglycans. Osteoarthritis is a degenerative disease of articular cartilage, in which an early-stage indicator is the loss of proteoglycans from the collagen matrix. In this study, confocal Raman microspectroscopy was applied to study the degradation of articular cartilage, specifically focused on spatially mapping the loss of glycosaminoglycans (GAGs). Trypsin digestion was used as a model for cartilage degradation. Two different scanning geometries for confocal Raman mapping, cross-sectional and depth scans, were applied. The chondroitin sulfate coefficient maps derived from Raman spectra provide spatial distributions similar to histological staining for glycosaminoglycans. The depth scans, during which subsurface data were collected without sectioning the samples, can also generate spectra and GAG distributions consistent with Raman scans of the surface-to-bone cross sections. In native tissue, both scanning geometries demonstrated higher GAG content at the deeper zone beneath the articular surface and negligible GAG content after trypsin degradation. On partially digested samples, both scanning geometries detected an &#x223c;100&#xa0;&#x3bc;m layer of GAG depletion. Overall, this research provides a technique with high spatial resolution (25&#xa0;&#x3bc;m pixel size) to measure cartilage degradation without tissue sections using confocal Raman microspectroscopy, laying a foundation for potential <italic>in vivo</italic> measurements and osteoarthritis diagnosis.</p>
</abstract>
<kwd-group>
<kwd>confocal Raman microspectroscopy</kwd>
<kwd>articular cartilage</kwd>
<kwd>osteoarthritis</kwd>
<kwd>glycosaminoglycans</kwd>
<kwd>cartilage degradation model</kwd>
</kwd-group>
<contract-num rid="cn001">F31 AR070009</contract-num>
<contract-num rid="cn002">1927197</contract-num>
<contract-num rid="cn003">1719875</contract-num>
<contract-sponsor id="cn001">National Institute of Arthritis and Musculoskeletal and Skin Diseases<named-content content-type="fundref-id">10.13039/100000069</named-content>
</contract-sponsor>
<contract-sponsor id="cn002">Division of Civil, Mechanical and Manufacturing Innovation<named-content content-type="fundref-id">10.13039/100000147</named-content>
</contract-sponsor>
<contract-sponsor id="cn003">Division of Materials Research<named-content content-type="fundref-id">10.13039/100000078</named-content>
</contract-sponsor>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>Osteoarthritis (OA) is a degenerative disease that mainly affects articular cartilage and related joint tissues. Articular cartilage is the tissue at the end of long bones that provides a smooth surface and lubricated joint motion, as well as a mechanically robust structure for load bearing. Structurally, articular cartilage is composed of three layers: a thin surface layer that contains a dense collagen fiber network that is oriented parallel to the articular surface and with low proteoglycan content; a middle zone that has relatively disorganized collagen fibers and a higher proteoglycan content; and, adjacent to the bone, a deep zone that contains collagen fibers oriented perpendicular to the bone surface and has the highest proteoglycan content (<xref ref-type="bibr" rid="B45">Muir et&#x20;al., 1970</xref>). During the progression of OA, the major organic components of cartilage extracellular matrix (ECM), the collagen network and proteoglycans, are gradually degraded by enzymes released during the inflammatory response (<xref ref-type="bibr" rid="B44">Mort and Billington, 2001</xref>; <xref ref-type="bibr" rid="B39">Martel-Pelletier et&#x20;al., 2016</xref>). This degradation causes roughening of the articular surface, leading to mechanically induced ECM degradation and death of chondrocytes (cells that renew and maintain the ECM). Over time, the cartilage becomes severely eroded, causing thickening of subchondral bone and eventually direct bone-on-bone contact within the joint space. Clinically, OA is diagnosed by radiographic methods, such as Kellgren-Lawrence scores (<xref ref-type="bibr" rid="B34">Kellgren and Lawrence, 1957</xref>), in which joint space narrowing is considered the main diagnostic indicator. Notably, joint-space narrowing is indicative of advanced disease. As such, X-ray techniques cannot detect OA at its early stages. In early stage OA, the cartilage structure remains intact while chemical degradation of ECM components is happening close to the articular surface. The major hallmark for early stage OA is the depletion of subsurface glycosaminoglycans (GAGs), such as aggrecan (<xref ref-type="bibr" rid="B37">Lark et&#x20;al., 1995</xref>). This work addresses the need for an analytical technique able to detect these chemical changes in cartilage composition that are indicative of early stage OA. Specifically, we use Raman microspectroscopy to spatially map the removal of proteoglycans from bovine cartilage.</p>
<p>Experimental studies of early-stage cartilage disease typically utilize histological stains to demonstrate cartilage quality (<xref ref-type="bibr" rid="B49">Pritzker et&#x20;al., 2006</xref>). For instance, the scoring system presented by the Osteoarthritis Research Society International (OARSI) is fully developed based on compositional and structural information in histology sections, including proteoglycan reduction and surface discontinuity. Typical histology stains such as Safranin-O and Alcian Blue (for proteoglycans) or Picrosirius Red (for collagen) are utilized to demonstrate the distribution of the main biochemical components. These techniques are effective for qualitative assessment of the distribution of matrix components but are inherently not quantitative. Fourier transform infrared (FTIR) microspectroscopy has also been applied for more quantitative analysis of degraded cartilage. Concentrations of biomolecules can be measured quantitatively using FTIR, based on the absorption spectra of the tissue (<xref ref-type="bibr" rid="B14">Camacho et&#x20;al., 2001</xref>; <xref ref-type="bibr" rid="B55">Rieppo et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B35">Khanarian et&#x20;al., 2014</xref>). However, both histology and FTIR microspectroscopy require tissue removal and subsequent processing including fixation, dehydration, sectioning, and mounting. As such, their utility for clinical diagnosis and disease monitoring is limited. Magnetic resonance imaging (MRI) is used clinically for assessing cartilage quality (<xref ref-type="bibr" rid="B3">Alhadlaq et&#x20;al., 2004</xref>; <xref ref-type="bibr" rid="B29">Goodwin et&#x20;al., 2004</xref>; <xref ref-type="bibr" rid="B48">Potter et&#x20;al., 2009</xref>; <xref ref-type="bibr" rid="B13">Bron et&#x20;al., 2013</xref>). Although MRI collects information about thickness, surface characterization, and biochemical components, it is limited in spatial resolution (&#x223c;100&#xa0;&#x3bc;m), which limits its ability to track the zonal compositional changes in the early stages of OA that are on the length scale of 150&#xa0;&#xb5;m (<xref ref-type="bibr" rid="B28">Glover and Mansfield, 2002</xref>).</p>
<p>Raman microspectroscopy is capable of measuring structural information non-destructively, with an adequate resolution (&#x3c;1&#xa0;&#x3bc;m) to collect signals related to biochemical composition and structure (<xref ref-type="bibr" rid="B9">Bergholt et&#x20;al., 2016b</xref>). This method is based on reflective vibrational spectroscopy and has been applied to several kinds of tissue such as ligaments, cartilage, osteochondral junctions, or bones, of which the major components are quite limited (water, collagen, proteoglycans, minerals) (<xref ref-type="bibr" rid="B43">Morris et&#x20;al., 2002</xref>; <xref ref-type="bibr" rid="B52">Raghavan et&#x20;al., 2010a</xref>; <xref ref-type="bibr" rid="B53">Raghavan et&#x20;al., 2010b</xref>; <xref ref-type="bibr" rid="B58">Takahashi et&#x20;al., 2014</xref>; <xref ref-type="bibr" rid="B12">Boys et&#x20;al., 2019</xref>; <xref ref-type="bibr" rid="B17">Das Gupta et&#x20;al., 2020</xref>). Unlike FTIR, the Raman signal of water does not have a strong overlap with ECM components, and as such, this technique can be applied to hydrated or even submerged tissue (<xref ref-type="bibr" rid="B26">Gamsjaeger et&#x20;al., 2014</xref>; <xref ref-type="bibr" rid="B32">Irwin et&#x20;al., 2021</xref>). Raman microspectroscopy has been applied to cartilage samples resulting in composition maps with a &#x223c;0.3&#xa0;&#x3bc;m spatial resolution. Chondrocytes are visible and the distribution of major components of cartilage (water, collagen, GAG, cytoplasm, DNA) can be detected (<xref ref-type="bibr" rid="B9">Bergholt et&#x20;al., 2016b</xref>). The normalized values of each component in Raman maps are also quantitatively related to the absolute biochemical concentration from the articular surface to the deep zone of the cartilage (<xref ref-type="bibr" rid="B2">Albro et&#x20;al., 2018</xref>). However, most studies using Raman microspectroscopy were performed on healthy cartilage samples. The ability of Raman microspectroscopy to measure biochemical distributions within degraded or damaged cartilage has received much less attention. In previous work, mapping of the depth-dependent composition of cartilage was accomplished by sectioning the tissue and scanning from the articular surface to the bone (<xref ref-type="bibr" rid="B9">Bergholt et&#x20;al., 2016b</xref>; <xref ref-type="bibr" rid="B2">Albro et&#x20;al., 2018</xref>). While this technique is quantitative, sectioning the tissue clinically from a patient for compositional analysis can cause secondary damage to the osteoarthritic&#x20;joint.</p>
<p>The objective of this study is to examine the effectiveness of confocal Raman microspectroscopy for mapping the composition of degraded cartilage. To achieve this objective, two scanning geometries were applied: 1) scanning from the cut face (referred to as cross-section scan), which enables quantification throughout the tissue depth, but cannot be accomplished clinically; 2) scanning confocally at the articular surface (referred to as depth scan), which has a limited depth of penetration, but could be applied <italic>in vivo</italic>. To assess the ability of confocal Raman microspectroscopy to image GAG loss from the articular surface, we used an established model of trypsin-induced degradation (<xref ref-type="bibr" rid="B10">Bonassar et&#x20;al., 1995</xref>; <xref ref-type="bibr" rid="B30">Griffin et&#x20;al., 2014</xref>; <xref ref-type="bibr" rid="B19">DiDomenico et&#x20;al., 2019</xref>). We assessed the extent to which GAG distribution maps achieved by this confocal Raman microspectroscopy technique are comparable to traditional methods such as histology. The outcomes of this study will provide new methods and data for the development of confocal Raman microspectroscopy as a technique for non-destructive, high-resolution cartilage compositional analysis.</p>
</sec>
<sec id="s2">
<title>2 Materials and Methods</title>
<sec id="s2-1">
<title>2.1 Cartilage Sample Preparation and Trypsin Degradation</title>
<p>Cartilage samples were harvested from neonatal bovine tibial plateaus (six animals) acquired from an abattoir (Gold Medal Packing, Rome, NY). Cylindrical cartilage samples were harvested by applying 5&#xa0;mm biopsy punches to the articular surface of the contact zone between the tibial plateau and the femoral condyle to obtain full-thickness samples (<xref ref-type="fig" rid="F1">Figure&#x20;1A</xref>, Step&#x20;1).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>
<bold>(A)</bold> Schematic diagram of sample preparation and characterization. Cylindrical cartilage samples (5&#xa0;mm) were collected from a bovine tibial plateau (1), digested in trypsin (2), rinsed (3), and bisected (4) for histological stains (5a) as well as Raman microspectroscopy (5b, c). Two Raman scanning geometries, cross-section scan (5b) and depth scan (5c), have been applied. <bold>(B)</bold> Reference Raman spectra collected for individual components in cartilage: top (blue) lyophilized rat tail collagen, middle (yellow) shark cartilage chondroitin sulfate (CS) powder; bottom (magenta) deionized water. <bold>(C)</bold> Representative Raman coefficient maps, and residual generated by fitting the three reference spectra in <bold>(B)</bold> to spectra obtained from native cartilage samples.</p>
</caption>
<graphic xlink:href="fbioe-09-744197-g001.tif"/>
</fig>
<p>Cylindrical cartilage samples were randomly divided into three different groups: native group, fully digested group, and partially digested group. For the native group, samples were incubated in phosphate buffered saline (PBS, Invitrogen, Grand Island, NY) for 2&#xa0;h. For the fully digested group, samples were incubated in a 0.25&#xa0;wt% trypsin solution (lyophilized powder from bovine pancreas, &#x2265;10,000 BAEE units/mg protein, Sigma-Aldrich, St. Louis, MO) for 2&#xa0;h to completely remove proteoglycans (<xref ref-type="bibr" rid="B10">Bonassar et&#x20;al., 1995</xref>). For the partially digested group, samples were incubated in a 0.000625&#xa0;wt% trypsin solution for 0.5&#xa0;h. All the samples were then rinsed in 10&#xa0;mL PBS at 4&#xb0;C for 1&#xa0;h. Each sample was cut with a razor blade into two semi-cylindrical pieces, one was used for Raman analysis, the other was used for biochemical analysis.</p>
</sec>
<sec id="s2-2">
<title>2.2 Raman Data Collection</title>
<sec id="s2-2-1">
<title>2.2.1 Sample Preparation</title>
<p>All cartilage samples were anchored in 2&#xa0;wt% low melting point agarose gel (gelling temperature 25&#x20;&#xb1; 5&#xb0;C, Fisher Bioreagents) in Petri dishes (diameter 40&#xa0;mm, height 12&#xa0;mm) to prevent movement during confocal Raman mapping. The gel solution was preheated to 80&#xb0;C in a water bath then cooled until 35&#xb0;C before added to the Petri dishes. For tissue anchoring, a thin layer of the gel solution was added to each Petri dish at 35&#xb0;C. Cartilage samples were then partially submerged in the solution, with the measuring surfaces exposed and facing upwards. The measuring surface of a sample is the articular-surface-to-bone cut face for the cross-section scan and is the articular surface for the depth scan. The dishes were cooled at 4&#xb0;C until completely gelled. PBS was then added into the dishes to submerge the tissue samples.</p>
</sec>
<sec id="s2-2-2">
<title>2.2.2 Raman Mapping</title>
<p>For scanning at the cross-section (<italic>cross-section scan</italic>), samples were mounted in the confocal Raman microscope to enable measurements along the articular surface-to-subchondral bone cut face of the sample (<xref ref-type="fig" rid="F1">Figure&#x20;1A</xref>, Step 5b). The pixel size for cross-section scans was 30&#x20;&#xd7; 30&#xa0;&#x3bc;m.</p>
<p>For scanning at the articular surface (<italic>depth scan</italic>), samples were mounted in the confocal Raman microscope to enable measurements along the articular surface of the sample (<xref ref-type="fig" rid="F1">Figure&#x20;1A</xref>, Step 5c). Depth-dependent information was collected by changing the working distance between the objective and the articular surface. The pixel size for depth scans was 25&#x20;&#xd7; 25&#xa0;&#x3bc;m.</p>
<p>All the confocal Raman spectra were collected with a WITec Alpha300R Confocal Raman microscope through a 40x dipping lens. A 532&#xa0;nm green laser with a 62&#xa0;mW power was used as the excitation source.</p>
</sec>
<sec id="s2-2-3">
<title>2.2.3 Spectral Analysis</title>
<p>Using the WITec Project FIVE software (Version 5.2 PLUS, WITec, Ulm, Germany), spectra collected from cartilage samples were baseline subtracted via the Shape function of the WITec Project FIVE software (Shape size parameter: 400) and cropped to 800&#x2013;1,800&#xa0;cm<sup>&#x2212;1</sup> fingerprint area, then normalized to the maximum intensity of their &#x2013;CH<sub>2</sub> bending peaks (&#x223c;1,445&#xa0;cm<sup>&#x2212;1</sup>). The mineralized region close to the subchondral bone was confirmed by calculating the 906&#x2013;986&#xa0;cm<sup>&#x2212;1</sup> phosphate peak areas and masked out manually.</p>
<p>Three different constituents, collagen (Col), chondroitin sulfate (CS), and water, were chosen as standards for the analysis. Collagen from rat tail tendons was extracted, purified, and lyophilized as described previously (<xref ref-type="bibr" rid="B31">Iannucci et&#x20;al., 2019</xref>), as the collagen standard sample. Chondroitin sulfate powder from shark cartilage (Sigma-Aldrich) was used as the CS standard. Deionized purified water was used as the water standard. For each reference, 12 Raman spectra were collected using a 532&#xa0;nm laser at 62&#xa0;mW through a 50&#xd7; objective. Spectra were baselined as described above, cropped to 800&#x2013;1,800&#xa0;cm<sup>&#x2212;1</sup> fingerprint region, and normalized to their highest peaks (&#x223c;1,670&#xa0;cm<sup>&#x2212;1</sup> for collagen, &#x223c;1,060&#xa0;cm<sup>&#x2212;1</sup> for CS, and &#x223c;1,640&#xa0;cm<sup>&#x2212;1</sup> for water). The average of the 12 spectra for each standard was considered as final reference spectra (<xref ref-type="fig" rid="F1">Figure&#x20;1B</xref>).</p>
<p>The three reference spectra (Col, CS, and water) were used for non-negative fitting through the WITec True Component analysis. Briefly, the reference spectra were input through the Component Spectra Drop action, and fitting was performed using the linear combination based, Basis Analysis function. At each pixel, the spectrum collected from a sample was fit by linear combination of the three reference spectra. By amalgamating all the pixels, fitting coefficient maps, as well as residual images, were generated via WITec Project FIVE software.</p>
</sec>
</sec>
<sec id="s2-5">
<title>2.3 Biochemical Analysis of Glycosaminoglycan Content</title>
<p>Dimethylmethylene Blue (DMMB) assay was applied to quantitatively measure the GAG content within the cartilage (<xref ref-type="bibr" rid="B23">Farndale et&#x20;al., 1986</xref>). Cartilage samples (<italic>n</italic>&#x20;&#x3d; 8) were collected as described above. The first 1&#xa0;mm to the articular surface and the last 1&#xa0;mm to the bone were removed. Samples were randomly separated into two groups, each including four samples. One group was fully digested with trypsin, and the other group was treated with PBS (as described above). Both groups were then rinsed for 1&#xa0;h, frozen overnight, and lyophilized for 48&#xa0;h. The lyophilized samples were then subjected to biochemical analyses for GAGs using a method previously reported (<xref ref-type="bibr" rid="B5">Ballyns et&#x20;al., 2008</xref>; <xref ref-type="bibr" rid="B19">DiDomenico et&#x20;al., 2019</xref>). Briefly, samples were digested by 0.125&#xa0;mg/mL papain (buffered aqueous suspension, Sigma-Aldrich) at 60&#xb0;C for 16&#xa0;h and mixed with 16&#xa0;mg/L DMMB solution (pH &#x3d; 1.5) in a well plate. The absorbance was measured at 525&#xa0;nm using a plate reader (Biotek Synergy HT). GAG content of the sample was calibrated by comparing the absorbance of samples to the standard curve, which was determined by polynomial fitting of the absorbance data from GAG standards.</p>
</sec>
<sec id="s2-6">
<title>2.4 Histology</title>
<p>Semi-cylindrical cartilage samples were fixed in 10 v/v% formalin solution for 24&#xa0;h, then in 70&#xa0;v/v% ethanol for 24&#xa0;h. Samples were embedded in paraffin and sectioned along the surface-to-bone cut face. Sections were dehydrated and deparaffinized using ethanol and xylene, then stained with Weigert&#x2019;s hematoxylin for 10&#xa0;min. For GAG visualization, the sections were counterstained with 0.001% fast green solution for 5&#xa0;min and stained with 0.1% Safranin-O for 8&#xa0;min. Slides were imaged with a Nikon Eclipse TE2000-S microscope (Nikon Instruments, Melville, NY) and a SPOT RT camera (Diagnostic Instruments, Steriling Heights,&#x20;MI).</p>
</sec>
<sec id="s2-7">
<title>2.5 Statistical Analysis</title>
<p>To measure the statistical significance, quantitative data from the biochemical analysis were expressed as mean&#x20;&#xb1; standard deviation. The pairwise comparisons of the biochemical data were analyzed <italic>via</italic> a one-way ANOVA test. Quantitative data from depth distribution measurements for native and digested cartilage were expressed as mean&#x20;&#xb1; standard deviation. The pairwise comparisons were analyzed via mixed model analysis. Fitting coefficient data from cross-section scans and depth scans at different depths were analyzed through a mixed-model approach. Estimated values and confidence intervals were compared between different scanning geometries and between native and digested tissue. All analyses were performed using the IBM SPSS software platform.</p>
</sec>
</sec>
<sec id="s3">
<title>3 Results</title>
<sec id="s3-1">
<title>3.1 Raman Microspectroscopy of Native and Fully Digested Cartilage</title>
<p>To achieve a controlled amount of GAG degradation in cartilage samples, we used a trypsin digestion model to mimic the degradation in early stage OA (<xref ref-type="fig" rid="F1">Figure&#x20;1A</xref>). Trypsin cleaves the core protein of aggrecan, the largest source of GAG in cartilage, but does not degrade the collagen helix (<xref ref-type="bibr" rid="B11">Bornstein et&#x20;al., 1966</xref>; <xref ref-type="bibr" rid="B4">Anderson, 1969</xref>). In order to map the distribution of ECM components in trypsin-degraded bovine cartilage, confocal Raman mapping was applied along the surface-to-bone cut face of semi-cylindrical bovine cartilage samples. The main components (collagen, GAGs, and water) in all the samples, both native and fully digested, were mapped (700&#xa0;&#xb5;m by 2,200&#xa0;&#xb5;m) from the articular surface to the subchondral bone (<xref ref-type="fig" rid="F1">Figure&#x20;1C</xref>).</p>
<p>In a single spectrum taken from the middle zone of the native cartilage (<xref ref-type="fig" rid="F2">Figure&#x20;2A</xref>), diagnostic peaks were observed in the 800&#x2013;1,800&#xa0;cm<sup>&#x2212;1</sup> fingerprint region, including &#x223c;857&#xa0;cm<sup>&#x2212;1</sup> proline peak, &#x223c;935&#xa0;cm<sup>&#x2212;1</sup> collagen triple helices, &#x223c;1,060&#xa0;cm<sup>&#x2212;1</sup> sulfate peak (from GAGs), &#x223c;1,245&#xa0;cm<sup>&#x2212;1</sup> amide III peak, &#x223c;1,445&#xa0;cm<sup>&#x2212;1</sup> -CH<sub>2</sub> bending peak, and &#x223c;1,668&#xa0;cm<sup>&#x2212;1</sup> amide I peak (<xref ref-type="bibr" rid="B47">Pavlou et&#x20;al., 2018</xref>). These peaks were also observed in the spectrum from fully digested cartilage, excluding the 1,000&#x2013;1,200 and 1,300&#x2013;1,450&#xa0;cm<sup>&#x2212;1</sup> regions, which had a reduction of peak intensity compared to the spectrum of the native tissue. These regions were consistent with the main peaks of chondroitin sulfate (<xref ref-type="fig" rid="F1">Figure&#x20;1B</xref>), indicating a reduction in the GAG content of the tissue.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>
<bold>(A)</bold> Representative Raman spectra of native bovine cartilage and fully trypsin-digested bovine cartilage. (Spectra are obtained by averaging a 15-pixel by 15-pixel area at the center of the respective Raman images. Red arrows: GAG-related spectral regions). <bold>(B) (i)</bold> Safranin-O stained histology section of native cartilage, articular surface at the top of the image. <bold>(ii)</bold> CS coefficient map for the same region as <bold>(i)</bold>. <bold>(iii)</bold> Safranin-O stained histology section of fully trypsin-digested cartilage, articular surface at the top of the image. <bold>(iv)</bold> CS coefficient map for the same region as <bold>(iii)</bold>. <bold>(C)</bold> DMMB biochemical assay to determine the GAG content (GAG/wet wt.) of native cartilage and fully digested cartilage (<italic>n</italic>&#x20;&#x3d; 6, &#x2a;: <italic>p</italic>&#x20;&#x3c; 0.01). Abbreviations: Saf-O, Safranin-O; FG, Fast Green; CS, chondroitin sulfate.</p>
</caption>
<graphic xlink:href="fbioe-09-744197-g002.tif"/>
</fig>
<p>The Raman maps were generated from the fitting coefficients for the reference spectra at each pixel and compared to Safranin-O stained histological sections. Safranin-O staining on native cartilage (<xref ref-type="fig" rid="F2">Figure&#x20;2Bi</xref>) demonstrated a thin layer of cartilage with low GAG content at the articular surface and a relatively GAG-rich region in the deep zone. Similar distributions were observed in the Raman map of CS fitting coefficients (<xref ref-type="fig" rid="F2">Figure&#x20;2Bii</xref>). For fully digested samples, however, the lack of pink-red Safranin-O staining throughout the section indicated the absence of proteoglycans in this sample (<xref ref-type="fig" rid="F2">Figure&#x20;2Biii</xref>). The Raman map of the CS fitting coefficients showed a similar depletion of the GAG within the tissue (<xref ref-type="fig" rid="F2">Figure&#x20;2Biv</xref>).</p>
<p>To quantitatively demonstrate the effect of the trypsin digestion on removal of GAGs from the cartilage samples, a DMMB biochemical analysis was performed on the bulk tissue (<xref ref-type="fig" rid="F2">Figure&#x20;2C</xref>, <italic>n</italic>&#x20;&#x3d; 6 for each group). Based upon the DMMB assay, the fully digested cartilage demonstrated a &#x223c;75% loss of total GAG components after trypsin digestion as compared to the native cartilage GAG content (<italic>p</italic>&#x20;&#x3c;&#x20;0.01).</p>
</sec>
<sec id="s3-2">
<title>3.2 Subsurface Confocal Raman Microspectroscopy of Native and Fully Digested Cartilage</title>
<p>Confocal Raman mapping was applied to native and fully digested tissue samples under the depth scan method (<xref ref-type="fig" rid="F3">Figure&#x20;3A</xref>), in which depth-dependent information was collected confocally by moving the objective towards the articular surface and focusing into the tissue. For native tissue, the Raman map indicated a thin layer without CS at the articular surface of cartilage and a higher CS content at the deeper region. The Raman map of fully digested cartilage, however, demonstrated negligible CS content throughout the tissue. The collagen, on the other hand, is shown to be evenly distributed across the imaged area for both native and fully digested cartilage samples. Linear depth scans were performed starting from the articular surface and moving deeper into the tissue in 30&#xa0;&#x3bc;m increments down to 300&#xa0;&#x3bc;m. These scans were compared to those obtained by scanning at the cut face of cartilage from the surface to the deeper zone. Both scanning geometries were applied to native and fully digested tissue. Representative spectra at 300&#xa0;&#x3bc;m below the articular surface collected via both geometries (<xref ref-type="fig" rid="F3">Figure&#x20;3B</xref>) demonstrate similar spectra for native cartilage samples, showing that confocal spectra collection is possible within 300&#xa0;&#x3bc;m of the surface. In fully digested cartilage samples, the spectra showed weaker signals in 1,000&#x2013;1,200 and 1,300&#x2013;1,450&#xa0;cm<sup>&#x2212;1</sup> GAG regions and high similarity between the two different scanning geometries.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>
<bold>(A)</bold> Representative coefficient maps of CS and collagen (Col) obtained by confocal Raman depth scans on native (i,ii), and fully digested (iii,iv) articular cartilage. Red arrows: the 300&#xa0;&#x3bc;m depth position at which spectra in <bold>(B)</bold> were obtained. <bold>(B)</bold> Representative Raman spectra of native cartilage and fully digested cartilage, all taken from 300&#xa0;&#x3bc;m beneath the articular surface. Both cross-section scan and depth scan have been used, and a 200 a.u. offset was applied to each depth scan spectrum for clarity. <bold>(C)</bold> CS coefficient plotted as a function of distance from the articular surface, up to 300&#xa0;&#xb5;m beneath the surface. Data from two cross-section scans (native and digested) as well as two depth scans (native and digested) are plotted (<italic>n</italic>&#x20;&#x3d; 4).</p>
</caption>
<graphic xlink:href="fbioe-09-744197-g003.tif"/>
</fig>
<p>When the CS fitting coefficients are plotted as a function of distance from the articular surface (<xref ref-type="fig" rid="F3">Figure&#x20;3C</xref>), in native tissue, a depth-dependent increase was seen when scanning below the surface (<italic>p</italic>&#x20;&#x3c; 0.01). Similar trends in GAG content of native tissue were observed by both scanning geometries: low at the articular surface and high at deeper regions (<italic>p</italic>&#x20;&#x3d; 0.111). For fully digested tissue, both scanning geometries show negligible GAG concentrations throughout the 300&#xa0;&#xb5;m scanning region.</p>
</sec>
<sec id="s3-3">
<title>3.3 Confocal Raman Mapping of Partially Digested Cartilage</title>
<p>To model early-stage OA in which GAG depletion occurs only near the articular surface, we used a much lower concentration of trypsin for a shorter digestion time. Confocal Raman mappings, both cross-section and depth scans, were applied to the partially digested bovine cartilage. Histological analysis with Safranin-O staining (<xref ref-type="fig" rid="F4">Figure&#x20;4A</xref>) revealed a region of GAG depletion extending around 100&#xa0;&#x3bc;m from the trypsin-exposed surfaces (<xref ref-type="fig" rid="F4">Figure&#x20;4A</xref>, the top and left). The cross-section Raman scan showed a similar distribution (<xref ref-type="fig" rid="F4">Figure&#x20;4B</xref>), with a &#x223c;100&#xa0;&#xb5;m narrow band with high collagen coefficients but low CS coefficients observed at the trypsin-exposed surfaces. The CS coefficient map obtained from a depth scan recapitulated the distribution of collagen and GAGs observed in cross-section Raman maps and the histology image (<xref ref-type="fig" rid="F4">Figure&#x20;4D</xref>). A curved interface between GAG-depleted and CS-rich regions was observed in all three analyses. The point spectra taken from the digested region and the undigested region demonstrate evident differences in the GAG-related regions (1,000&#x2013;1,200 and 1,300&#x2013;1,450&#xa0;cm<sup>&#x2212;1</sup>) (<xref ref-type="fig" rid="F4">Figure&#x20;4C</xref>), which are consistent with the zonal differences observed in the histology images and the Raman&#x20;maps.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>
<bold>(A)</bold> Top: Light microscope image of partially trypsin-digested cartilage tissue stained by Safranin-O. Bottom: Higher-magnification of the area of interest (the red box). <bold>(B)</bold> Top: Overlaid coefficient map of CS and collagen took in the same region as <bold>(A)</bold>, taken by cross-section scan. Bottom: Higher magnification of the area of interest (the red box). <bold>(C)</bold> Point spectra collected from digested or undigested areas of the same sample. The collection points are shown as colored circles (indicated by red arrows) in (<bold>B</bold>, bottom) and <bold>(D)</bold>. A 200 a.u. offset was applied to each depth scan spectrum for clarity. <bold>(D)</bold> Overlaid coefficient map of the same sample as <bold>(B)</bold>, taken by depth scan. In <bold>(B)</bold> and <bold>(D)</bold>: Cyan: collagen; Yellow: CS.</p>
</caption>
<graphic xlink:href="fbioe-09-744197-g004.tif"/>
</fig>
</sec>
</sec>
<sec id="s4">
<title>4 Discussion</title>
<p>In this study, data collected from confocal Raman microspectroscopy were used to spatially map GAG loss in a trypsin digestion model of cartilage degradation. Cross-section Raman scans at the cut face of cartilage and confocal depth scans at the articular surface were applied to native and digested cartilage samples. The resulting maps successfully imaged the GAG distribution in partially degraded cartilage, a model for early stages of OA, with a pixel size of 25&#xa0;&#x3bc;m.</p>
<p>Our research demonstrates that confocal Raman microspectroscopy has the potential to be utilized for compositional analysis of cartilage degradation. Although several analytical techniques have been utilized on tissues like cartilage which is made of only a few major components, they all have limitations. Traditional measurements for proteoglycan distribution in ECM are mostly performed via histological stains, such as Safranin-O or Alcian blue. However, fixation and sectioning of samples may lead to artifacts or inconsistencies between different sections. The staining outcome also varies among samples, making it unsuitable for quantitative analysis (<xref ref-type="bibr" rid="B56">Rosenberg, 1971</xref>; <xref ref-type="bibr" rid="B36">Kir&#xe1;ly et&#x20;al., 1996</xref>; <xref ref-type="bibr" rid="B50">Puchtler et&#x20;al., 1988</xref>). Overall, despite being widely utilized in analyses of degraded cartilage, such methods reveal only qualitative distribution of each biochemical component within a sample. Spectroscopic techniques, like FTIR imaging, can yield more quantitative results (<xref ref-type="bibr" rid="B55">Rieppo et&#x20;al., 2010</xref>). However, FTIR-based imaging techniques require specific sample preparation, including thin-sectioning, dehydration, optional embedding, and mounting on non-IR absorbing slides (<xref ref-type="bibr" rid="B59">Taylor and Donnelly, 2020</xref>). In contrast, Raman microspectroscopy can be utilized for quantitative analysis on thicker, unfixed, hydrated, or even submerged samples, because water does not have strong contributions to Raman signals, especially in the fingerprint region (<xref ref-type="bibr" rid="B2">Albro et&#x20;al., 2018</xref>). Raman microspectroscopy has also been reported to be non-detrimental to cells (<xref ref-type="bibr" rid="B26">Gamsjaeger et&#x20;al., 2014</xref>; <xref ref-type="bibr" rid="B1">Akiva et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B7">Bergholt et&#x20;al., 2017</xref>), making it potentially available for analyzing tissue <italic>in vivo</italic> (<xref ref-type="bibr" rid="B62">Zeng et&#x20;al., 2008</xref>; <xref ref-type="bibr" rid="B20">Duraipandian et&#x20;al., 2014</xref>).</p>
<p>In this study, Raman spectra were collected via cross-section scans and depth scans. In cross-section scans, spectra were collected along the cut face of articular cartilage from the surface to the deep zone. Since the scans are at the cut face of the sample, cross-section scans can image the entire tissue from the articular surface to subchondral bone. For depth scans, however, spectra were collected confocally as optical slices of different depths by moving the objective and the focal plane. Spectral intensities decrease with depth into the tissue due to light absorption and scattering. However, these effects are similar across spectra, enabling quantitative comparisons by normalizing peaks of interest to reference peaks. Notably, these two scanning geometries yield similar results within the first 300&#xa0;&#x3bc;m from the tissue surface (<xref ref-type="fig" rid="F4">Figure&#x20;4</xref>). A previous study indicates that the superficial zone thickness is less than 250&#xa0;&#x3bc;m for human, bovine, and canine cartilage (<xref ref-type="bibr" rid="B46">Panula et&#x20;al., 1998</xref>; <xref ref-type="bibr" rid="B51">Quinn et&#x20;al., 2013</xref>). Hence, obtaining reliable spectra from 300&#xa0;&#x3bc;m beneath the articular surface enables detection of the GAG-rich region, where GAG depletion first occurs in early stage OA. Since the depth scan does not require cutting of the sample, it can be applied to intact tissue. In early stage OA, GAG depletion occurs at the surface layer of articular cartilage (<xref ref-type="bibr" rid="B37">Lark et&#x20;al., 1995</xref>; <xref ref-type="bibr" rid="B49">Pritzker et&#x20;al., 2006</xref>). Imaging from a 300&#xa0;&#x3bc;m layer beneath the surface will be informative to assess early stage OA. Therefore, this technique has the potential to be applied under circumstances when tissue biopsies are saved or even through Raman-compatible arthroscopic probes (<xref ref-type="bibr" rid="B7">Bergholt et&#x20;al., 2017</xref>).</p>
<p>In our study, both histology and biochemical analysis demonstrate a considerable GAG reduction in trypsin-digested tissue. Raman spectra and maps show similar results (<xref ref-type="bibr" rid="B24">Farndale et&#x20;al., 1982</xref>; <xref ref-type="bibr" rid="B15">Chandrasekhar et&#x20;al., 1987</xref>), with negligible coefficients of chondroitin sulfate detected, as indicated by near 0 values of CS fitting coefficients (<xref ref-type="fig" rid="F2">Figures 2A,B</xref>). The results show that proteoglycan reduction can be measured by confocal Raman mapping. High-resolution Raman maps of GAG content recapitulate the distribution seen in histology. In native tissue, both geometries indicated low GAG concentration at the articular surface and an increase of GAG concentration at the deeper zone. In fully digested tissue both methods showed negligible GAG concentration throughout the samples. The distribution is consistent with previous work, in which the GAG distribution is determined by histology (<xref ref-type="bibr" rid="B57">Silverberg et&#x20;al., 2014</xref>). The Raman coefficient maps, which showed a significant reduction in chondroitin sulfate content but no change in collagen content (<xref ref-type="fig" rid="F3">Figures 3Ai,iii</xref>), are consistent with literature studies that show trypsin exposure removed proteoglycans but did not damage the collagen network (<xref ref-type="bibr" rid="B10">Bonassar et&#x20;al., 1995</xref>; <xref ref-type="bibr" rid="B19">DiDomenico et&#x20;al., 2019</xref>). Considering that the Raman spectral intensity of each component of ECM is assumed to be proportional to its concentration, this semi-quantitative method effectively compares the GAG distribution among samples with different levels of degradation (<xref ref-type="fig" rid="F2">Figures 2Bii,iv</xref>; <xref ref-type="fig" rid="F4">Figures 4B,D</xref>) (<xref ref-type="bibr" rid="B2">Albro et&#x20;al., 2018</xref>).</p>
<p>The partially digested articular cartilage samples were used as a model for early-stage OA in which GAG depletion happens primarily near the surface but in the absence of surface fibrillation. Such degradation corresponds to OARSI grade 1 or 2 (<xref ref-type="bibr" rid="B49">Pritzker et&#x20;al., 2006</xref>). In our study, Raman microspectroscopy detected GAG removal by trypsin degradation near the edge of samples in a thin band with a thickness around 100&#xa0;&#x3bc;m. Notably, the resolution of Raman microscopy (25&#xa0;&#x3bc;m pixel size) is better than other <italic>in vivo</italic> techniques like GAG-specific MRI. These Raman maps are also consistent with the Safranin-O staining of these tissues. Nonetheless, a slight difference in the thickness of the digestion edge was noticeable between Safranin-O staining (&#x223c;100&#xa0;&#x3bc;m) and Raman maps (&#x223c;150&#xa0;&#x3bc;m). This difference could be either due to the different sensitivity between Raman mapping and the Safranin-O dye or due to the deformation of histological samples under formalin fixation and sectioning.</p>
<p>While these results are promising, we still have some limitations for interpreting our data. For each sample, the time for spectral collection is long, typically for several hours. With the limitation of the confocal Raman microscope, spectra collected from regions more than 300&#xa0;&#x3bc;m below the articular surface are noisy and unsuitable for reference fitting. A higher penetration depth might be possible by increasing the laser power. A 532&#xa0;nm laser with 200&#xa0;mW power (<xref ref-type="bibr" rid="B12">Boys et&#x20;al., 2019</xref>) and a 785&#xa0;nm laser with 250&#xa0;mW power (<xref ref-type="bibr" rid="B7">Bergholt et&#x20;al., 2017</xref>) have been reported to not damage cells in submerged microscopy systems. A too high laser power, however, can damage organic tissue and therefore there is a tradeoff between depth penetration and tissue integrity. Other Raman methods, such as Spatially Offset Raman Spectroscopy (SORS) and Transmission Raman Spectroscopy (TRS) were reported to give better signals for sub-surface spectra collection (<xref ref-type="bibr" rid="B61">Vardaki et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B27">Ghita et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B42">Matousek and Stone, 2016</xref>). Despite their applications for imaging other tissue such as bone (<xref ref-type="bibr" rid="B41">Matousek et&#x20;al., 2006</xref>; <xref ref-type="bibr" rid="B16">Cui et&#x20;al., 2020</xref>), to the best of our knowledge, these techniques have not been reported for cartilage imaging.</p>
<p>Additionally, although the non-negative spectral fitting was successful, it is important to note that the reference spectra were collected from dry forms of the biomacromolecules. As compared to dry forms, in hydrated cartilage tissue, biomacromolecules like collagen and GAGs have different tertiary and quaternary structures due to the hydration of these molecules and intermolecular interactions. For example, the Raman signature of collagen is strongly dependent on the size and orientation of collagen fibers, the aggregation of aggrecan can affect its spectra, and the hydration of chondroitin sulfate also alters the Raman signature (<xref ref-type="bibr" rid="B6">Bansil et&#x20;al., 1978</xref>; <xref ref-type="bibr" rid="B21">Ellis et&#x20;al., 2009</xref>; <xref ref-type="bibr" rid="B40">Masic et&#x20;al., 2011</xref>; <xref ref-type="bibr" rid="B25">Galvis et&#x20;al., 2013</xref>). In future work, obtaining hydrated reference spectra may yield more nuanced maps of macromolecule orientation and confirmation in the hydrated cartilage tissue. Some features of the Raman fingerprint area can also indicate detailed differences among compositions, such as chondroitin-4-sulfate (C4S) and chondroitin-6-sulfate (C6S) (<xref ref-type="bibr" rid="B21">Ellis et&#x20;al., 2009</xref>). Nevertheless, more advanced analysis techniques are required to decompose spectra of similar molecules from the Raman spectra of the cartilage tissue.</p>
<p>This study collected data from the articular surface and on hydrated tissue. This technique has the potential to be incorporated into a fiber-optic Raman device, creating an optical fiber-based confocal Raman detection unit for an arthroscope (<xref ref-type="bibr" rid="B22">Esmonde-White et&#x20;al., 2011</xref>; <xref ref-type="bibr" rid="B8">Bergholt et&#x20;al., 2016a</xref>; <xref ref-type="bibr" rid="B7">Bergholt et&#x20;al., 2017</xref>; <xref ref-type="bibr" rid="B33">Kandel et&#x20;al., 2020</xref>). Since <italic>in vivo</italic> Raman spectra have been reported to be collected from human skin, lung, and bone (<xref ref-type="bibr" rid="B41">Matousek et&#x20;al., 2006</xref>; <xref ref-type="bibr" rid="B62">Zeng et&#x20;al., 2008</xref>), such a device may advance the analysis for <italic>in vivo</italic> animal models and diagnoses of early stage OA. Here, we have only applied this technique to a simplified enzymatic digestion model of bovine cartilage. Human cartilage, in contrast, is reported to be thicker in general but has a similar thickness in the superficial zone (<xref ref-type="bibr" rid="B54">Rieppo et&#x20;al., 2003</xref>; <xref ref-type="bibr" rid="B60">Taylor et&#x20;al., 2012</xref>). A higher composition of non-GAG solid content is also observed in human cartilage (<xref ref-type="bibr" rid="B18">D&#xe9;marteau et&#x20;al., 2006</xref>). Therefore, Raman maps that have different distribution or higher collagen content are expected to be acquired when human samples are studied, while superficial zone (50&#x2013;100&#xa0;&#x3bc;m thick for bovine cartilage) and transition zone (100&#x2013;200&#xa0;&#x3bc;m thick for bovine cartilage) of the samples (<xref ref-type="bibr" rid="B38">Mansfield and Winlove, 2017</xref>) can still be covered. Naturally occurring OA could be more complex, possibly including a roughened surface or thinner cartilage layer, which may result in lowered reflection or signal contribution from bone autofluorescence, leading to difficulties in analyzing Raman data. Other biomolecules, like hemoglobin and lipids, can also cause excessive background signals or distortions in Raman spectra, leading to further difficulties. This effect may prove challenging for <italic>in vivo</italic> imaging, where the bathing medium is synovial fluid that may contain components that complicate the interpretation of Raman&#x20;data.</p>
</sec>
<sec id="s5">
<title>5 Conclusion</title>
<p>This work investigated the ability of confocal Raman microspectroscopy to determine the GAG distribution within trypsin-degraded bovine articular cartilage. We applied two different scan geometries using Raman microspectroscopy, cross-section scans and depth scans, on a trypsin digestion cartilage model for component analysis. The spatial distributions of major components (e.g., collagen, CS) within the articular cartilage obtained from Raman maps were qualitatively similar to the spatial distributions revealed by histology. Native bovine cartilage samples had lower GAG content at the articular surface, with an increase in GAG content at the deeper zone. Fully trypsin-digested samples show negligible GAG content throughout the entire tissue. We found that both scan geometries can provide similar Raman spectra when measuring beneath the articular surface. In cross-section scans, the data were collected from the exposed articular-surface-to-bone cut face. The depth scan enables depth-dependent spectra collection at the articular surface by moving the focal plane beneath the tissue surface, providing a data collection method that does not require sectioning of the tissue. In partially digested samples, zonal GAG depletion was detected by both scanning geometries. A thin digestion region at a &#x223c;100&#xa0;&#x3bc;m scale was observed. Regional compositional differences were shown both in point spectra and in Raman maps and recapitulate the results shown in histology. This work demonstrates that confocal Raman microscopy is capable of high-resolution compositional analysis for degraded articular cartilage. The results lay a foundation for non-invasive measurements of cartilage composition for <italic>in vivo</italic> studies and clinical early-stage OA diagnosis.</p>
</sec>
</body>
<back>
<sec id="s6">
<title>Data Availability Statement</title>
<p>The raw data supporting the conclusion of this article will be made available by the authors, without undue reservation.</p>
</sec>
<sec id="s7">
<title>Author Contributions</title>
<p>TG, AB, LE, and LB contributed to conception and design of this study. TG, AB, CZ, and KC took part in the acquisition and analysis of the data. All the authors contributed to interpretation of data and discussion. TG wrote the draft of the manuscript. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="s8">
<title>Funding</title>
<p>This work was supported by NSF CMMI 1927197 and NIH F31 AR070009. This work also made use of the Cornell Center for Materials Research Shared Facilities which are supported through the NSF MRSEC program (DMR-1719875).</p>
</sec>
<sec sec-type="COI-statement" id="s9">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ack>
<p>The authors greatly acknowledge Jennie A. M. R. Kunitake (Department of Materials Science and Engineering, Cornell&#x20;University) for providing technical support on software operation and spectral analysis. The authors would also like to thank Cornell University Animal Health Diagnostic Center for the support on histology stains and analysis.</p>
</ack>
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