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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Bacteriol.</journal-id>
<journal-title>Frontiers in Bacteriology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Bacteriol.</abbrev-journal-title>
<issn pub-type="epub">2813-6144</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fbrio.2024.1476727</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Bacteriology</subject>
<subj-group>
<subject>Case Report</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>A case report of severe pulmonary legionellosis caused by <italic>Legionella bozemanae</italic>
</article-title> </title-group>
<contrib-group>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Xu</surname>
<given-names>Peixing</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
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</contrib>
<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Wang</surname>
<given-names>Fang</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
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<contrib contrib-type="author" equal-contrib="yes">
<name>
<surname>Ren</surname>
<given-names>Hongyu</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn003">
<sup>&#x2020;</sup>
</xref>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Ni</surname>
<given-names>Wentao</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Zhao</surname>
<given-names>Na</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Li</surname>
<given-names>Ran</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Chen</surname>
<given-names>Yanwen</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
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</contrib>
<contrib contrib-type="author">
<name>
<surname>Gao</surname>
<given-names>Zhancheng</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
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<contrib contrib-type="author" corresp="yes">
<name>
<surname>Qin</surname>
<given-names>Tian</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
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<aff id="aff1">
<sup>1</sup>
<institution>National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention</institution>, <addr-line>Beijing</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Respiratory Medicine, Peking University People&#x2019;s Hospital</institution>, <addr-line>Beijing</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Weng C. Chan, University of Nottingham, United Kingdom</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Stanimir S. Ivanov, Louisiana State University Health Shreveport, United States</p>
<p>Thorsten Kuczius, University Hospital M&#xfc;nster, Germany</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Tian Qin, <email xlink:href="mailto:qintian@icdc.cn">qintian@icdc.cn</email>
</p>
</fn>
<fn fn-type="equal" id="fn003">
<p>&#x2020;These authors have contributed equally to this work and share first authorship</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>16</day>
<month>10</month>
<year>2024</year>
</pub-date>
<pub-date pub-type="collection">
<year>2024</year>
</pub-date>
<volume>3</volume>
<elocation-id>1476727</elocation-id>
<history>
<date date-type="received">
<day>06</day>
<month>08</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>30</day>
<month>09</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2024 Xu, Wang, Ren, Ni, Zhao, Li, Chen, Gao and Qin</copyright-statement>
<copyright-year>2024</copyright-year>
<copyright-holder>Xu, Wang, Ren, Ni, Zhao, Li, Chen, Gao and Qin</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>We report a case of Legionnaires&#x2019; disease caused by <italic>Legionella bozemanae</italic>, which is the first time that <italic>L. bozemanae</italic> has been isolated from a bronchoalveolar lavage fluid sample from an immunocompromised patient in China. The findings highlight the susceptibility of immunocompromised patients to infections caused by the rare but highly pathogenic <italic>L. bozemanae</italic>.</p>
</abstract>
<kwd-group>
<kwd>
<italic>Legionella bozemanae</italic>
</kwd>
<kwd>Legionnaires&#x2019; disease</kwd>
<kwd>pneumonia</kwd>
<kwd>non-<italic>pneumophila legionella</italic>
</kwd>
<kwd>antibiotic susceptibility</kwd>
</kwd-group>
<contract-sponsor id="cn001">Foundation for Innovative Research Groups of the National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100012659</named-content>
</contract-sponsor>
<counts>
<fig-count count="2"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="8"/>
<page-count count="5"/>
<word-count count="1679"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Emerging Bacterial Threats and their Treatment</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>
<italic>Legionella</italic>, a bacterial genus that is widespread in aquatic environments, enters human alveolar macrophages via the respiratory tract and causes Legionnaires&#x2019; disease (<xref ref-type="bibr" rid="B5">Mondino et&#xa0;al., 2020</xref>). <italic>Legionella bozemanae</italic>, which was first isolated in 1959 from the lung tissue of a navy diver, is a rare cause of Legionnaires&#x2019; disease, accounting for 3%&#x2013;5% cases of pneumonia caused by <italic>Legionella</italic> (<xref ref-type="bibr" rid="B1">Bozeman et&#xa0;al., 1968</xref>; <xref ref-type="bibr" rid="B4">Mitchell et&#xa0;al., 1984</xref>; <xref ref-type="bibr" rid="B6">Reingold et&#xa0;al., 1984</xref>). The associated mortality rate is up to 40% (<xref ref-type="bibr" rid="B7">Taylor and Albrecht, 1995</xref>). Diagnosis is difficult because this species is insensitive to serological tests and urinary antigen tests for <italic>L. pneumophila</italic> serogroup 1 (<xref ref-type="bibr" rid="B2">Guyard and Low, 2011</xref>; <xref ref-type="bibr" rid="B8">Widmer et&#xa0;al., 2007</xref>). Here we report a case involving an immunocompromised patient in China who developed Legionnaires&#x2019; disease caused by <italic>L. bozemanae</italic>. The clinical manifestations included cough, expectoration, lung infiltration, fever, and dyspnea. Second-generation sequencing of plasma and bronchoalveolar lavage fluid (BALF) showed positivity for <italic>L. bozemanae</italic>. After anti-infective treatment with rifampicin, moxifloxacin, azithromycin, piperacillin/tazobactam, the patient gradually recovered. To our knowledge, this is the first time that <italic>L. bozemanae</italic> has been isolated from patient sample in China, and the findings are expected to provide a reference for clinical diagnosis.</p>
</sec>
<sec id="s2">
<title>Case presentation</title>
<p>The patient was a 50-year-old male farmer with a 30-year history of smoking 5&#x2013;20 cigarettes per day and social drinking. On August 24, 2022, he was admitted to a hospital in Beijing with fever, cough, yellow sputum, and progressively worsening dyspnea for 9 days. Eight days before admission, he developed a fever after taking a bath and turning on the air conditioner. The fever was accompanied by peripheral aches and pains followed by the gradual development of a cough and yellow sputum with dyspnea on exertion. The highest recorded temperature was 39.9&#xb0;C 3 days before admission, with worsening cough and sputum; therefore, he visited an outpatient clinic. Test results showed the following: white blood cells, 42.12 &#xd7; 10<sup>9</sup>/L; hemoglobin, 122 g/L; platelets, 1424 &#xd7; 10<sup>9</sup>/L; and C-reactive protein, 311.4 mg/L. Chest computed tomography suggested multiple infectious foci in both lungs, predominantly in the lower lobe of the right lung; mild pleural effusion on the right side; and multiple lymph nodes in the mediastinum, some of which were slightly enlarged. Following admission, <italic>L. pneumophila</italic> IgM antibody titers were 0.56, 1.24, and 1.31, respectively, and the oxygenation index was 151. Right lower lung palpation showed fibrillation was slightly diminished, and percussion revealed murmurs. The breath sounds were low, with coarse breath sounds heard over the left lung, and no dry rales were heard. The patient&#x2019;s dyspnea worsened, and he received an oxygen mask (8 L/min) with meropenem (1.0g q8h), moxifloxacin (0.4g qd), and vancomycin (1.0 g q12h) for treating the infection. Bedside fiberoptic bronchoscopy showed some golden-yellow secretions in the lumen, congestion of the tracheal mucosa, and a sharp, central bulge. Second-generation sequencing of plasma and bronchoalveolar lavage fluid (BALF) showed positivity for <italic>L. bozemanae.</italic> The patient gradually recovered following anti-infective treatment with rifampicin (0.45 g qd), moxifloxacin (0.4 g qd), azithromycin (0.5 g qd) and piperacillin/tazobactam (4.5 g q8h). Eventually, the patient was cured and discharged (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Timeline for the course of the disease.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fbrio-03-1476727-g001.tif"/>
</fig>
</sec>
<sec id="s3">
<title>Methods</title>
<sec id="s3_1">
<title>Bioinformatics</title>
<p>The DNA was extracted using a DNA extraction kit (QIAamp DNA Mini Kit, QIAGEN, Hilden, Germany) following the manufacturer&#x2019;s instructions. The quality qualified DNA was analysed by Next-generation sequencing (NGS) at Novogene Co., Ltd. (Beijing, China). This DNA sample was fragmented to 350bp size by ultrasonic crushing to construct a small fragment gene library, and double-end sequencing was performed based on Illumina NovaSeq PE150 to remove a certain proportion of low-quality data in the sequenced raw data to ensure the accuracy and reliability of the results of the subsequent information analysis. After obtaining valid data, SOAP denovo software and CISA software were used for assembly and integration.</p>
<p>Single-copy orthologous genes were identified based on gene family clustering, and single-copy core genes were identified based on core-pan analysis. MUSCLE software was used to compare the genes, and the phylogenetic tree was constructed by TreeBeST software using the NJ method and the maximum likelihood method of PHYML.</p>
</sec>
<sec id="s3_2">
<title>Intracellular growth assay</title>
<p>Mouse macrophages J774 were cultured in DMEM-H (Gibco, NY, USA) medium supplemented with 10% fetal bovine serum at 37 &#xb0;C with 5% CO<sub>2</sub>. Logarithmic growth phase suspensions of <italic>L. bozemanae</italic>, <italic>L. pneumophila</italic> ATCC 33152, and <italic>L. pneumophila</italic> philadelphia1 (JR32) (approximately 1&#xd7;10<sup>8</sup> CFU/mL) were diluted 10-fold in DMEM-H medium to bring the infected suspensions to 1&#xd7;10<sup>7</sup> CFU/mL. Add 1 mL of infected bacterial suspension to J774 mouse macrophages (1&#xd7;10<sup>5</sup> cells/mL) pre-spread in a 24-well plate so that the Multiplicity Of Infection (MOI) is 100. After the infected cells were incubated in a 5% CO<sub>2</sub> incubator at 37 &#xb0;C for 1.5 h, the supernatant solution containing the bacteria was discarded and the cells were washed three times with 500 &#x3bc;L of 10 mM phosphate buffered saline (PBS; Gibco) to remove extracellular bacteria. Then 0.5 mL DMEM-H medium containing 10% fetal bovine serum (FBS; Gibco) was added to each well. To determine the number of proliferating bacteria in J774 cells, 0.5 mL sterile distilled water was added to each well every 24 h to completely suspend the infected cells in the culture medium, and then transferred to a 1.5 mL sterile centrifuge tube. The number of proliferating bacteria was counted by spreading the gradient bacterial solution on buffered charcoal yeast extract (BCYE; Oxoid) plates by serial dilution, and each experiment was repeated three times.</p>
</sec>
<sec id="s3_3">
<title>Antimicrobial susceptibility testing</title>
<p>Antimicrobial susceptibility testing was performed according to EUCAST recommendations and manufacturer&#x2019;s instructions (<ext-link ext-link-type="uri" xlink:href="https://www.eucast.org/eucastguidancedocuments/">https://www.eucast.org/eucastguidancedocuments/</ext-link>). Epidemiological cut-off (ECOFF) of resistance determined by EUCAST guidelines was used to interpret the results. The minimum inhibitory concentration (MIC) of antibiotics for routine clinical treatment against each strain was evaluated using the E-test strip method, and <italic>L. pneumophila</italic> ATCC 33152 was used as a control for drug susceptibility testing. Fresh colonies were taken and resuspended in PBS and the concentration of the bacterial solution was adjusted to 0.5 McFarland standard. The surface of BCYE-&#x3b1; plate was uniformly wiped with a sterile cotton swab dipped in bacterial solution, and the E test strip was placed in the center of the plate. After incubation at 35&#xb0;C for 48 h, the MIC value of the E test strip was determined. The experiment was repeated for three times.</p>
</sec>
</sec>
<sec id="s4" sec-type="results">
<title>Results and discussion</title>
<p>The patient&#x2019;s sputum sample was spread on glycine&#x2013;vancomycin&#x2013;polymyxin&#x2013;cycloheximide plates (OXOID, UK) for pathogen isolation. The isolated strain was identified as <italic>L. bozemanae</italic> by 16S rRNA gene sequencing and next-generation sequencing. Evaluation of phylogenetic trees based on gene families (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2A</bold>
</xref>) and core genes (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2B</bold>
</xref>) showed that <italic>L. bozemanae</italic> BOZE (ICDC) was most closely related to <italic>L. bozemanae</italic> 94163278 (<xref ref-type="supplementary-material" rid="SF1">
<bold>Supplementary Data Sheets S1</bold>
</xref> and <xref ref-type="supplementary-material" rid="SF2">
<bold>S2</bold>
</xref>). Whole genome sequencing data have been deposited in the NCBI BioProject repository (accession no. PRJNA992381) and the BioSample database (accession no. SAMN36348289).</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Genetic evolution and pathogenicity of the <italic>L. bozemanae</italic> strain BOZE (ICDC). <bold>(A)</bold> Phylogenetic tree based on the gene family for <italic>Legionella</italic> species. <bold>(B)</bold> Phylogenetic tree based on the core genes of <italic>L. bozemanae</italic>. <bold>(C)</bold> Comparison of intracellular proliferation in J774 mouse macrophages between <italic>L. bozemanae</italic> strain BOZE (ICDC) and control strains <italic>L. pneumophila</italic> Philadelphia 1 (JR32) and <italic>L. pneumophila</italic> ATCC 33152 at T0, T24, T48, and T72 hours. The results are presented as means &#xb1; SD from three independent experiments. Significance was assessed at a 95% confidence interval (*p&lt;0.05) by two-way ANOVA with Bonferroni&#x2019;s multiple-comparison test.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fbrio-03-1476727-g002.tif"/>
</fig>
<p>An understanding of the biological features of bacteria can provide a solid basis for infection treatment. At present, 17% environmental and clinical <italic>Legionella</italic> species in China have been found to exhibit azithromycin resistance (<xref ref-type="bibr" rid="B3">Jia et&#xa0;al., 2019</xref>). Therefore, the sensitivity of <italic>L. bozemanae</italic> BOZE (ICDC) to nine representative antibiotics (ciprofloxacin, levofloxacin, moxifloxacin, erythromycin, azithromycin, clarithromycin, rifampicin, tigecycline and doxycycline) was tested, and it was found that the minimum inhibitory concentration values were significantly lower than the epidemiological cut-off values (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). Thus, routine clinical medications can be used to treat Legionnaires&#x2019; disease caused by <italic>L. bozemanae</italic> BOZE (ICDC). Cytologic experiments showed that the fold change in growth over T0 of <italic>L. pneumophila</italic> ATCC 33152 and <italic>L. bozemanae</italic> BOZE(ICDC) was overall higher than that of JR32 at T24, T48, and T72 hours. And similar intracellular proliferative capacity compared to the highly pathogenic and virulent <italic>L. pneumophila</italic> ATCC 33152 suggests the need to be vigilant about the infection of <italic>L. pneumophila</italic> BOZE (ICDC) (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2C</bold>
</xref>).</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>MIC values for the clinical isolate of <italic>L. bozemanae</italic>.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left">Antibiotic class</th>
<th valign="middle" align="left">Drugs</th>
<th valign="middle" align="left">MIC range (mg/liter)</th>
<th valign="middle" align="left">ECOFF (mg/liter)</th>
<th valign="middle" align="left">ATCC 33152</th>
<th valign="middle" align="left">
<italic>L. bozemanae</italic>
</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">
<bold>Quinolone</bold>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">Ciprofloxacin</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.25-2</td>
<td valign="middle" align="left" style="background-color:#ffffff">1.0</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.38<sup>*</sup>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.25<sup>*</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">
<bold>Quinolone</bold>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">Levofloxacin</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.064-1</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.50</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.125<sup>*</sup>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.125<sup>*</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">
<bold>Quinolone</bold>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">Moxifloxacin</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.25-1</td>
<td valign="middle" align="left" style="background-color:#ffffff">1.0</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.75<sup>*</sup>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.75<sup>*</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">
<bold>Macrolide</bold>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">Erythromycin</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.032-2</td>
<td valign="middle" align="left" style="background-color:#ffffff">1.0</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.50<sup>*</sup>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.125<sup>*</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">
<bold>Macrolide</bold>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">Azithromycin</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.038-8</td>
<td valign="middle" align="left" style="background-color:#ffffff">1.0</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.25<sup>*</sup>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.25<sup>*</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">
<bold>Macrolide</bold>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">Clarithromycin</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.064-1</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.50</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.19<sup>*</sup>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.094<sup>*</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">
<bold>Rifamycin</bold>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">Rifampicin</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.004-0.032</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.032</td>
<td valign="middle" align="left" style="background-color:#ffffff">&lt;0.016<sup>*</sup>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">&lt;0.016<sup>*</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">
<bold>Glycylcycline</bold>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">Tigecycline</td>
<td valign="middle" align="left" style="background-color:#ffffff">1-16</td>
<td valign="middle" align="left" style="background-color:#ffffff">16</td>
<td valign="middle" align="left" style="background-color:#ffffff">0.5<sup>*</sup>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">1.0<sup>*</sup>
</td>
</tr>
<tr>
<td valign="middle" align="left" style="background-color:#ffffff">
<bold>Tetracycline</bold>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">Doxycycline</td>
<td valign="middle" align="left" style="background-color:#ffffff">1-8</td>
<td valign="middle" align="left" style="background-color:#ffffff">8</td>
<td valign="middle" align="left" style="background-color:#ffffff">4<sup>*</sup>
</td>
<td valign="middle" align="left" style="background-color:#ffffff">1.0<sup>*</sup>
</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>MIC, minimum inhibitory concentration.</p>
</fn>
<fn>
<p>
<sup>*</sup>MIC values within the range of susceptibility.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>In summary, we reported a rare case of Legionnaires&#x2019; disease caused by the rare <italic>L. bozemanae</italic> in China. Our findings highlight that clinicians should be aware that infection with this species may go undetected in patients with clinical pneumonia, and they should particularly consider <italic>Legionella</italic> infection in immunocompromised patients. In addition, the surveillance and investigation of <italic>L. bozemanae</italic> in aquatic environments should be strengthened to prevent and control the outbreak of Legionnaires&#x2019; disease caused by <italic>L. bozemanae</italic>.</p>
</sec>
</body>
<back>
<sec id="s5" sec-type="data-availability">
<title>Data availability statement</title>
<p>The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found below: NCBI, PRJNA992381, SAMN36348289.</p>
</sec>
<sec id="s6" sec-type="ethics-statement">
<title>Ethics statement</title>
<p>The study was approved by the Ethical Committee of the Chinese Center for Disease Control and Prevention (No. ICDC-202115). The studies were conducted in accordance with the local legislation and institutional requirements. Written informed consent for participation in this study was provided by the participants&#x2019; legal guardians/next of kin. Written informed consent was obtained from the individual(s) for the publication of any potentially identifiable images or data included in this article.</p>
</sec>
<sec id="s7" sec-type="author-contributions">
<title>Author contributions</title>
<p>PX: Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. FW: Software, Writing &#x2013; original draft. HR: Methodology, Writing &#x2013; original draft. WN: Validation, Writing &#x2013; review &amp; editing. NZ: Investigation, Writing &#x2013; original draft. RL: Investigation, Writing &#x2013; original draft. YC: Data curation, Writing &#x2013; original draft. ZG: Methodology, Writing &#x2013; original draft. TQ: Conceptualization, Writing &#x2013; review &amp; editing.</p>
</sec>
<sec id="s8" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This work was supported by grants from the National Natural Science Foundation of China [grant number 81671985], and the Science Foundation for the State Key Laboratory for Infectious Disease Prevention and Control of China [grant numbers 2022SKLID209, 2019SKLID403], and the Public Health Service Capability Improvement Project of the National Health Commission of the People&#x2019;s Republic of China [grant numbers 2100409034, 0104205].</p>
</sec>
<sec id="s9" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s10" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11" sec-type="supplementary-material">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fbrio.2024.1476727/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fbrio.2024.1476727/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet1.fasta" id="SF1" mimetype="text/x-fasta">
<label>Supplementary DATA SHEET S1</label>
<caption>
<p>Gene family phylogenetic tree related genes for <italic>Legionella.</italic>
</p>
</caption>
</supplementary-material>
<supplementary-material xlink:href="DataSheet2.fasta" id="SF2" mimetype="text/x-fasta">
<label>Supplementary DATA SHEET S2</label>
<caption>
<p>Core genes phylogenetic tree related genes for <italic>L. bozemanae.</italic>
</p>
</caption>
</supplementary-material>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bozeman</surname> <given-names>F. M.</given-names>
</name>
<name>
<surname>Humphries</surname> <given-names>J. W.</given-names>
</name>
<name>
<surname>Campbell.</surname> <given-names>J. M.</given-names>
</name>
</person-group> (<year>1968</year>). <article-title>A new group of rickettsia-like agents recovered from Guinea pigs</article-title>. <source>Acta Virol.</source> <volume>12</volume>, <fpage>87</fpage>&#x2013;<lpage>93</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1146/annurev-pathmechdis-012419-032742</pub-id>
</citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Guyard</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Low</surname> <given-names>D. E.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>
<italic>Legionella</italic> infections and travel associated legionellosis</article-title>. <source>Travel Med. Infect. Dis.</source> <volume>9</volume>, <fpage>176</fpage>&#x2013;<lpage>186</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/s0163-4453(84)94027-1</pub-id>
</citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jia</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Ren</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Nie</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Li</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Li</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Qin</surname> <given-names>T.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Antibiotic resistance and azithromycin resistance mechanism of <italic>legionella pneumophila</italic> serogroup 1 in China</article-title>. <source>Antimicrob. Agents Chemother.</source> <volume>63</volume> (<issue>10</issue>), <elocation-id>e00768-19</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1093/infdis/149.5.819</pub-id>
</citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mitchell</surname> <given-names>R. G.</given-names>
</name>
<name>
<surname>Pasvol</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Newnham.</surname> <given-names>R. S.</given-names>
</name>
</person-group> (<year>1984</year>). <article-title>Pneumonia due to <italic>Legionella bozemanii</italic>: first report of a case in Europe</article-title>. <source>J. Infect.</source> <volume>8</volume>, <fpage>251</fpage>&#x2013;<lpage>255</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1093/clinids/20.2.329</pub-id>
</citation>
</ref>
<ref id="B5">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mondino</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Schmidt</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Rolando</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Escoll</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Gomez-Valero</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Buchrieser</surname> <given-names>C</given-names>
</name>
</person-group>. (<year>2020</year>). <article-title>Legionnaires&#x2019; Disease: state of the art knowledge of pathogenesis mechanisms of <italic>legionella</italic>
</article-title>. <source>Annu. Rev. Pathol.</source> <volume>15</volume>, <fpage>439</fpage>&#x2013;<lpage>466</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.tmaid.2010.05.006</pub-id>
</citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Reingold</surname> <given-names>A. L.</given-names>
</name>
<name>
<surname>Thomason</surname> <given-names>B. M.</given-names>
</name>
<name>
<surname>Brake</surname> <given-names>B. J.</given-names>
</name>
<name>
<surname>Thacker</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Wilkinson</surname> <given-names>H. W.</given-names>
</name>
<name>
<surname>Kuritsky</surname> <given-names>J. N.</given-names>
</name>
</person-group> (<year>1984</year>). <article-title>
<italic>Legionella pneumonia</italic> in the United States: the distribution of serogroups and species causing human illness</article-title>. <source>J. Infect. Dis.</source> <volume>149</volume> (<issue>5</issue>), <fpage>819</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1093/infdis/149.5.819</pub-id>
</citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Taylor</surname> <given-names>T. H.</given-names>
</name>
<name>
<surname>Albrecht</surname> <given-names>M. A.</given-names>
</name>
</person-group> (<year>1995</year>). <article-title>
<italic>Legionella bozemanii</italic> cavitary pneumonia poorly responsive to erythromycin: case report and review</article-title>. <source>Clin. Infect. Dis.</source> <volume>20</volume>, <fpage>329</fpage>&#x2013;<lpage>334</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1128/aac.00768-19</pub-id>
</citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Widmer</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Hohl</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Dirnhofer</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Bassetti</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Marsch</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Frei</surname> <given-names>R</given-names>
</name>
</person-group>. (<year>2007</year>). <article-title>
<italic>Legionella bozemanii</italic>, an elusive agent of fatal cavitary pneumonia</article-title>. <source>Infection</source> <volume>35</volume> (<issue>3</issue>), <fpage>180</fpage>&#x2013;<lpage>181</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s15010-007-6251-4</pub-id>
</citation>
</ref>
</ref-list>
</back>
</article>