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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Astron. Space Sci.</journal-id>
<journal-title>Frontiers in Astronomy and Space Sciences</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Astron. Space Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-987X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">1062007</article-id>
<article-id pub-id-type="doi">10.3389/fspas.2022.1062007</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Astronomy and Space Sciences</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Geochemical bio-signatures in Martian analogue basaltic environments using laboratory experiments and thermochemical modelling</article-title>
<alt-title alt-title-type="left-running-head">Cogliati et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fspas.2022.1062007">10.3389/fspas.2022.1062007</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Cogliati</surname>
<given-names>Simone</given-names>
</name>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1886122/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Wolsey</surname>
<given-names>Elliot</given-names>
</name>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ramkissoon</surname>
<given-names>Nisha K.</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/1390053/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Schwenzer</surname>
<given-names>Susanne P.</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/449422/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Pearson</surname>
<given-names>Victoria K.</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/408253/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Olsson-Francis</surname>
<given-names>Karen</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/349732/overview"/>
</contrib>
</contrib-group>
<aff>
<institution>AstrobiologyOU</institution>, <institution>Faculty of Science and Technology</institution>, <institution>Engineering and Mathematics</institution>, <institution>The Open University</institution>, <addr-line>Milton Keynes</addr-line>, <country>United Kingdom</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/652442/overview">Barbara Cavalazzi</ext-link>, University of Bologna, Italy</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/537244/overview">Eva Mateo-Marti</ext-link>, Center for Astrobiology (CSIC), Spain</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/25340/overview">Ricardo Amils</ext-link>, Autonomous University of Madrid, Spain</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Simone Cogliati, <email>s.cogliati86@gmail.com</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Astrobiology, a section of the journal Frontiers in Astronomy and Space Sciences</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>17</day>
<month>11</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>9</volume>
<elocation-id>1062007</elocation-id>
<history>
<date date-type="received">
<day>05</day>
<month>10</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>04</day>
<month>11</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Cogliati, Wolsey, Ramkissoon, Schwenzer, Pearson and Olsson-Francis.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Cogliati, Wolsey, Ramkissoon, Schwenzer, Pearson and Olsson-Francis</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>The identification of geochemical bio-signatures is important for assessing whether life existed on early Mars. In this paper, experimental microbiology and thermochemical modelling were combined to identify potential inorganic bio-signatures for life detection on early Mars. An analogue mixed microbial community from an analogue terrestrial fluvio-lacustrine environment similar to an ancient lacustrine system at Gale Crater was used to study microbial dissolution of a basalt regolith simulant and the formation of bio-signatures over a short time frame (1&#xb0;month) at 14&#xb0;C, 2 bar. Microbial growth influenced element dissolution (Mg, Fe, Mn, Ca and K) and the formation of morphologies and Fe-Si amorphous layers on mineral surfaces. Thermochemical models were performed at 14&#xb0;C, 2 bar; the results were compared with experimental data to predict bio-signatures that would occur over geological timescales. The pH was varied to simulate abiotic and biotic experimental conditions. Model results suggest that, at water to rock ratios of 100 to 38, a less complex secondary mineral assemblage forms during biotic dissolution compared to abiotic weathering. Carbonates, quartz, pyrite and hydroxyapatite form under biotic conditions, whereas in the abiotic system magnetite and phyllosilicates would also precipitate. These results could be used to distinguish between abiotic and biotic basalt weathering processes, aiding the interpretation of data from Mars exploration missions.</p>
</abstract>
<kwd-group>
<kwd>Mars</kwd>
<kwd>Mars bio-signatures</kwd>
<kwd>terrestrial analogue</kwd>
<kwd>thermochemical modelling</kwd>
<kwd>microbiology</kwd>
</kwd-group>
<contract-num rid="cn001">ST/S001522/1</contract-num>
<contract-num rid="cn002">124.18</contract-num>
<contract-sponsor id="cn001">United Kingdom Space Agency<named-content content-type="fundref-id">10.13039/100011690</named-content>
</contract-sponsor>
<contract-sponsor id="cn002">Research England<named-content content-type="fundref-id">10.13039/501100013589</named-content>
</contract-sponsor>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>Finding evidence of past or present life on Mars is one of the key objectives of the most recent and future space exploration missions (NASA&#x2019;s Mars Science Laboratory, NASA&#x2019;s Mars 2020, and ESA&#x2019;s ExoMars&#x2014;<xref ref-type="bibr" rid="B58">Grotzinger et al., 2012</xref>; <xref ref-type="bibr" rid="B141">Vago et al., 2017</xref>; <xref ref-type="bibr" rid="B45">Ehrenfried, 2022</xref>). Since water is essential for life as we know it, most of the efforts are focused on the investigation of potentially habitable extraterrestrial aqueous environments where water may have existed, or still exists. Geological, geochemical and geomorphological evidence collected by orbiting spacecraft, landers and rovers (e.g., Mars Odyssey, Curiosity, Opportunity, Mars Express) suggest that early Mars had a denser atmosphere, warmer surface temperatures, and more clement and less oxidising environmental conditions than today (e.g. <xref ref-type="bibr" rid="B26">Carr and Head, 2010</xref>; <xref ref-type="bibr" rid="B81">Mangold et al., 2012</xref>) that may have been conducive to life (<xref ref-type="bibr" rid="B89">Molina-Cuberos et al., 2001</xref>; <xref ref-type="bibr" rid="B15">Bibring et al., 2005</xref>; <xref ref-type="bibr" rid="B134">Tian et al., 2009</xref>). Among other places, impact-generated hydrothermal systems (<xref ref-type="bibr" rid="B123">Schwenzer and Kring, 2009</xref>; <xref ref-type="bibr" rid="B86">Marzo et al., 2010</xref>; <xref ref-type="bibr" rid="B81">Mangold et al., 2012</xref>; <xref ref-type="bibr" rid="B121">Schwenzer et al., 2012</xref>; <xref ref-type="bibr" rid="B103">Osinski et al., 2013</xref>; <xref ref-type="bibr" rid="B6">Arvidson et al., 2014</xref>; <xref ref-type="bibr" rid="B50">Fox et al., 2016</xref>; <xref ref-type="bibr" rid="B138">Turner et al., 2016</xref>) and fluvio-lacustrine systems (e.g., Gale and Jezero Craters&#x2014;<xref ref-type="bibr" rid="B60">Grotzinger et al., 2014</xref>; <xref ref-type="bibr" rid="B59">Grotzinger et al., 2015</xref>; <xref ref-type="bibr" rid="B112">Rampe et al., 2017</xref>; <xref ref-type="bibr" rid="B82">Mangold et al., 2021</xref>; <xref ref-type="bibr" rid="B137">Tu et al., 2021</xref>) identified on Mars may have been habitable (<xref ref-type="bibr" rid="B80">Malin and Edgett, 2003</xref>; <xref ref-type="bibr" rid="B1">Abramov and Kring, 2005</xref>; <xref ref-type="bibr" rid="B68">Irwin et al., 2005</xref>; <xref ref-type="bibr" rid="B81">Mangold et al., 2012</xref>; <xref ref-type="bibr" rid="B151">Williams et al., 2013</xref>; <xref ref-type="bibr" rid="B60">Grotzinger et al., 2014</xref>; <xref ref-type="bibr" rid="B47">Fassett and Head, 2015</xref>) in the Noachian&#x2014;early Hesperian (4.1&#x2013;3.0&#xa0;Ga, <xref ref-type="bibr" rid="B60">Grotzinger et al., 2014</xref>). It has been suggested that Gale Crater&#x2019;s aqueous environment had a circumneutral pH, temperatures suitable for low salinity water bodies (e.g., lake, rivers) that were stable over geological timescales, a varied chemical history and sedimentological features that can be associated with complex aqueous processes and potentially diverse redox conditions that may have been used as an energy source for life (<xref ref-type="bibr" rid="B60">Grotzinger et al., 2014</xref>; <xref ref-type="bibr" rid="B21">Bridges et al., 2015</xref>; <xref ref-type="bibr" rid="B66">Hurowitz et al., 2017</xref>; <xref ref-type="bibr" rid="B38">Edgar et al., 2020</xref>; <xref ref-type="bibr" rid="B51">Fraeman et al., 2020</xref>; <xref ref-type="bibr" rid="B111">Rampe et al., 2020</xref>; <xref ref-type="bibr" rid="B110">Ramkissoon et al., 2021</xref>; <xref ref-type="bibr" rid="B113">Rapin et al., 2021</xref>).</p>
<p>Since rocks of basaltic composition dominate the Martian surface (<xref ref-type="bibr" rid="B95">Nyquist et al., 2001</xref>; <xref ref-type="bibr" rid="B31">Christensen et al., 2005</xref>; <xref ref-type="bibr" rid="B49">Filiberto, 2008</xref>; <xref ref-type="bibr" rid="B136">Treiman and Filiberto, 2015</xref>; <xref ref-type="bibr" rid="B90">Morris et al., 2016</xref>; <xref ref-type="bibr" rid="B83">Mangold et al., 2017</xref>), weathering processes and/or brine evaporation has evolved clay minerals, carbonates, sulfates and other alteration minerals (<xref ref-type="bibr" rid="B106">Poulet et al., 2005</xref>; <xref ref-type="bibr" rid="B107">Poulet et al., 2007</xref>; <xref ref-type="bibr" rid="B42">Ehlmann et al., 2008</xref>; <xref ref-type="bibr" rid="B91">Mustard et al., 2008</xref>; <xref ref-type="bibr" rid="B43">Ehlmann et al., 2009</xref>; <xref ref-type="bibr" rid="B21">Bridges et al., 2015</xref>; <xref ref-type="bibr" rid="B127">Stern et al., 2015</xref>; <xref ref-type="bibr" rid="B24">Bultel et al., 2019</xref>; <xref ref-type="bibr" rid="B64">Horgan et al., 2020</xref>). The presence of such secondary minerals, for example at Gale and Jezero Craters, indicates a variety of alteration conditions and water-rock reactions that may have controlled the local chemical conditions (e.g., chemistry of the fluids, redox state of elements, release of elements into the fluids) and, thus, the availability of bio-essential elements. Understanding the formation of secondary minerals is therefore critical to determining the potential habitability of aqueous environments (<xref ref-type="bibr" rid="B120">Schulte et al., 2006</xref>; <xref ref-type="bibr" rid="B61">Hand et al., 2007</xref>; <xref ref-type="bibr" rid="B22">Bridges and Schwenzer, 2012</xref>).</p>
<p>In terrestrial aqueous systems, the chemistry of alteration products and the reactions occurring in each system are influenced by the local environmental conditions, parent rock mineralogy and permeability, water-to-rock ratios, duration of alteration, and the presence of microbes (<xref ref-type="bibr" rid="B17">Boston et al., 2001</xref>; <xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>; <xref ref-type="bibr" rid="B123">Schwenzer and Kring, 2009</xref>; <xref ref-type="bibr" rid="B40">Ehlmann et al., 2013</xref>; <xref ref-type="bibr" rid="B21">Bridges et al., 2015</xref>; <xref ref-type="bibr" rid="B27">Carter et al., 2015</xref>; <xref ref-type="bibr" rid="B97">Olsson-Francis et al., 2015</xref>; <xref ref-type="bibr" rid="B155">Zolotov and Mironenko, 2016</xref>). Laboratory experiments, among other insights, have shown that microbes can enhance basalt weathering rates sourcing bio-essential elements from olivine, pyroxene and plagioclase (e.g. <xref ref-type="bibr" rid="B142">Vandevivere et al., 1994</xref>; <xref ref-type="bibr" rid="B157">Barker et al., 1998</xref>; <xref ref-type="bibr" rid="B117">Rogers et al., 1998</xref>; <xref ref-type="bibr" rid="B70">Kalinowski et al., 2000</xref>; <xref ref-type="bibr" rid="B76">Liermann et al., 2000</xref>; <xref ref-type="bibr" rid="B10">Bennet et al., 2001</xref>; <xref ref-type="bibr" rid="B146">Welch et al., 2002</xref>; <xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>; <xref ref-type="bibr" rid="B139">Uroz et al., 2009</xref>; <xref ref-type="bibr" rid="B97">Olsson-Francis et al., 2015</xref>; <xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>), whereby microbes use multiple mechanisms to extract bio-essential elements from basaltic rocks including the production of excess protons, low molecular weight organic acids, siderophores (highly specific Fe<sup>3&#x2b;</sup> ligands) and extracellular polysaccharides and enzymes (<xref ref-type="bibr" rid="B147">Welch and Ullman, 1993</xref>; <xref ref-type="bibr" rid="B142">Vandevivere et al., 1994</xref>; <xref ref-type="bibr" rid="B157">Barker et al., 1998</xref>; <xref ref-type="bibr" rid="B10">Bennet et al., 2001</xref>; <xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>; <xref ref-type="bibr" rid="B97">Olsson-Francis et al., 2015</xref>). Some of these processes can leave specific chemical and mineralogical signatures in the rocks that indicate the former presence of life.</p>
<p>Bio-signatures are formed by microbial activity (e.g., <xref ref-type="bibr" rid="B142">Vandevivere et al., 1994</xref>; <xref ref-type="bibr" rid="B8">Banfield et al., 2001</xref>; <xref ref-type="bibr" rid="B149">Westall et al., 2015</xref>; <xref ref-type="bibr" rid="B108">Price et al., 2018</xref>; <xref ref-type="bibr" rid="B130">Tan et al., 2018</xref>) and can be divided in two main categories: 1) organic bio-signatures, which are biomolecules produced by organisms as part of their metabolic and reproductive machinery (<xref ref-type="bibr" rid="B128">Summons et al., 2011</xref>; <xref ref-type="bibr" rid="B118">R&#xf6;ling et al., 2015</xref>; <xref ref-type="bibr" rid="B149">Westall et al., 2015</xref>; <xref ref-type="bibr" rid="B62">Hays et al., 2017</xref>; <xref ref-type="bibr" rid="B141">Vago et al., 2017</xref>); and 2) inorganic bio-signatures, which include morphological fossils, sedimentary structures, isotope fractionation, and mineral alterations that are the result of microbial activity (<xref ref-type="bibr" rid="B8">Banfield et al., 2001</xref>; <xref ref-type="bibr" rid="B25">Cady et al., 2003</xref>; <xref ref-type="bibr" rid="B149">Westall et al., 2015</xref>; <xref ref-type="bibr" rid="B141">Vago et al., 2017</xref>; <xref ref-type="bibr" rid="B87">McMahon et al., 2018</xref>). Such bio-signatures can be preserved within the geological record and used as evidence of the presence of life in terrestrial and extraterrestrial environments, including early Martian aqueous systems. Owing to the detrimental effect of the conditions at the present-day surface of Mars, which can degrade organic molecules (<xref ref-type="bibr" rid="B131">Ten Kate et al., 2005</xref>; <xref ref-type="bibr" rid="B36">Dartnell, 2011</xref>; <xref ref-type="bibr" rid="B62">Hays et al., 2017</xref>; <xref ref-type="bibr" rid="B141">Vago et al., 2017</xref>), inorganic bio-signatures, such as secondary alteration minerals, may be more appropriate for assessing whether life existed on early Mars. For example, biotically produced secondary minerals may be preserved in Martian rocks and be detectable through <italic>in-situ</italic> measurements by on-going and up-coming rover missions (<xref ref-type="bibr" rid="B141">Vago et al., 2017</xref>).</p>
<p>To identify and use, unambiguously, specific secondary mineral assemblages as bio-signatures for life detection, it is fundamental to have a comprehensive comparison between biotic and abiotic weathering processes. Investigating analogue environments is one way of informing our understanding of potential bio-signatures. Unfortunately, the heterogeneity of the natural environment, the lack of control over changes during even a short sampling period, and the difficulty of finding relevant abiotic controls, make such work challenging. Moreover, although basalt weathering and secondary alteration mineral formation have been widely investigated in the field and in laboratory experiments under abiotic (<xref ref-type="bibr" rid="B54">Gislason and Eugster, 1987</xref>; <xref ref-type="bibr" rid="B96">Oelkers and Gislason, 2001</xref>; <xref ref-type="bibr" rid="B153">Wolff-Boenisch et al., 2006</xref>) and biotic conditions (<xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>; <xref ref-type="bibr" rid="B98">Olsson-Francis et al., 2010</xref>; <xref ref-type="bibr" rid="B102">Olsson-Francis et al., 2012</xref>; <xref ref-type="bibr" rid="B97">Olsson-Francis et al., 2015</xref>; <xref ref-type="bibr" rid="B99">Olsson-Francis et al., 2016</xref>; <xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>; <xref ref-type="bibr" rid="B108">Price et al., 2018</xref>; <xref ref-type="bibr" rid="B101">Olsson-Francis et al., 2020</xref>) these studies have been only over short timeframes (months&#x2014;years). This makes it difficult, if not impossible, to predict what would happen over years or even over geological time scales when the rock is fully dissolved or more likely, subject to the effects of incongruent dissolution. In these circumstances, the formation of amorphous and leached layers, and secondary mineral precipitation, may occur, influencing the availability of cations for use in biological metabolism and, thus, the formation of bio-signatures (e.g. <xref ref-type="bibr" rid="B147">Welch and Ullman, 1993</xref>; <xref ref-type="bibr" rid="B11">Benzerara et al., 2004</xref>; <xref ref-type="bibr" rid="B13">Benzerara et al., 2005</xref>).</p>
<p>In order to overcome this problem, thermochemical modelling can be used to study, theoretically, alteration processes that can occur over geological timescales. Owing to its capability to predict secondary mineral assemblages and variations in fluid chemistries by assessing reaction pathways during water-rock interactions, thermochemical modelling has been widely applied to study alteration processes that happened, or may have happened, in terrestrial and Martian aqueous environments (<xref ref-type="bibr" rid="B56">Griffith and Shock, 1997</xref>; <xref ref-type="bibr" rid="B73">K&#xfc;hn, 2004</xref>; <xref ref-type="bibr" rid="B156">Zolotov and Mironenko, 2007</xref>; <xref ref-type="bibr" rid="B85">Marion et al., 2008</xref>; <xref ref-type="bibr" rid="B22">Bridges and Schwenzer, 2012</xref>; <xref ref-type="bibr" rid="B29">Catalano, 2013</xref>; <xref ref-type="bibr" rid="B48">Filiberto and Schwenzer, 2013</xref>; <xref ref-type="bibr" rid="B122">Schwenzer and Kring, 2013</xref>; <xref ref-type="bibr" rid="B21">Bridges et al., 2015</xref>; <xref ref-type="bibr" rid="B88">Melwani Daswani et al., 2016</xref>; <xref ref-type="bibr" rid="B155">Zolotov and Mironenko, 2016</xref>; <xref ref-type="bibr" rid="B110">Ramkissoon et al., 2021</xref>). Only recently, <xref ref-type="bibr" rid="B100">Olsson-Francis et al. (2017)</xref> used thermochemical modelling in conjunction with laboratory-based experiments to investigate and compare the alteration minerals that may form during microbial basalt weathering over a range of different timescales. The study suggested that an aerobic chemoorganoheterotrophic bacterium (<italic>Burkholderia</italic> sp. strain B_33), during long-term weathering of a naturally occurring altered basalt, would produce a less chemically and mineralogically diverse secondary mineral assemblage consisting of Fe-hydroxide and kaolinite, than under abiotic conditions, where chlorite would also be formed (<xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>). That study also demonstrated the utility of combining laboratory experiments and thermochemical modelling to identify secondary minerals that could be used to distinguish, unambiguously, weathering processes that may have occurred on early Mars (<xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>).</p>
<p>In this paper, we investigate the impact of microbial activity on a simulated Rocknest environment and the formation of inorganic bio-signatures using a combination of laboratory-based experiments and thermochemical modelling. The Rocknest environment was simulated by preparing a Martian regolith simulant with a composition similar to that of the Rocknest basalts (global Martian basaltic soils, <xref ref-type="bibr" rid="B16">Blake et al., 2013</xref>; <xref ref-type="bibr" rid="B119">Schmidt et al., 2014</xref>) and combining this with a minimal medium. A buffer was added to the medium to compensate for the reactions that would occur between the basalt and a CO<sub>2</sub> rich headspace, with the intent to create a stable environment with circumneutral pH (<xref ref-type="bibr" rid="B22">Bridges and Schwenzer, 2012</xref>) similar to ancient Martian aqueous systems (<xref ref-type="bibr" rid="B60">Grotzinger et al., 2014</xref>; <xref ref-type="bibr" rid="B143">Vaniman et al., 2014</xref>). To study the fluid chemistry variations and secondary minerals formed under biotic conditions we use a terrestrial analogue mixed anaerobic community consisting of chemoorganotrophs and chemolithotrophs. The analogue microbial community was isolated from a Mars analogue environment, the anoxic inter-tidal zone of the River Dee (United Kingdom), and had previously been deemed a plausible analogue to study habitability of ancient lacustrine systems on early Mars (e.g. Gale Crater) using laboratory-based simulation experiments (<xref ref-type="bibr" rid="B35">Curtis-Harper et al., 2018</xref>).</p>
<p>Experimental and model results were compared in order to identify chemical and mineralogical signatures that are uniquely produced by microbial weathering and may be used as inorganic bio-signatures for life detection on Mars. Instrumentation onboard current Martian rovers could provide mineralogical and geochemical data that would assist in the identification of potential bio-signatures, e.g., the CheMin (XRD) instrument and the Laser Induced Breakdown Spectroscopy (LIBS, ChemCam) and the Alpha Particle X-Ray Spectrometer (APXS) instrument on board of the Mars Science Laboratory Rover Curiosity (<xref ref-type="bibr" rid="B58">Grotzinger et al., 2012</xref>) and the most recent SuperCam (a LIBS instrument) and Raman instruments on board of the Perseverance rover (<xref ref-type="bibr" rid="B152">Williford et al., 2008</xref>).</p>
</sec>
<sec sec-type="methods" id="s2">
<title>2 Methods</title>
<sec id="s2-1">
<title>2.1 Preparation and characterization of the mars regolith simulant</title>
<p>For this study, a regolith simulant was prepared that was compositionally similar to basaltic float rocks analysed by Curiosity at Rocknest, Gale Crater (<xref ref-type="bibr" rid="B119">Schmidt et al., 2014</xref>) (<xref ref-type="table" rid="T1">Table 1</xref>). The simulant consisted of basalt from Le Cheix Puy de Dome (France) (<xref ref-type="table" rid="T1">Table 1</xref>), which was selected to represent a typical unweathered basalt, whereby any macroscopically visible weathering was separated out of the sample during the sample preparation. The basalt was supplemented with aegirine, an iron rich pyroxene (FeO 29.21&#xa0;wt%, <xref ref-type="table" rid="T1">Table 1</xref>) from Mount Malosa (Malawi). This was to ensure that the simulant contained an equivalent iron content to an average Martian basalt, which is higher than terrestrial basalts (<xref ref-type="bibr" rid="B77">Longhi et al., 1992</xref>), and to correct for Fe speciation. This is important when exploring Martian habitability since the Fe<sup>2&#x2b;</sup>/Fe<sup>3&#x2b;</sup> ratio is crucial for microbial metabolism (<xref ref-type="bibr" rid="B94">Nixon et al., 2013</xref>; <xref ref-type="bibr" rid="B110">Ramkissoon et al., 2021</xref>). Both the basalt and the aegirine were purchased from Richard Tayler Minerals (United Kingdom).</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Major element composition of the basalt, aegirine and regolith simulant in comparison to Rocknest composition.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Oxide (wt%)</th>
<th align="left">Basalt</th>
<th align="left">Aegirine</th>
<th align="left">Regolith analogue</th>
<th align="left">Rocknest&#x2a;</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">SiO<sub>2</sub>
</td>
<td align="char" char=".">44.7</td>
<td align="char" char=".">52.35</td>
<td align="char" char=".">47.48</td>
<td align="char" char=".">45.98</td>
</tr>
<tr>
<td align="left">Fe<sub>2</sub>O<sub>3(T)</sub>
</td>
<td align="char" char=".">11.73</td>
<td align="char" char=".">29.21</td>
<td align="char" char=".">18.09</td>
<td align="char" char=".">18.38</td>
</tr>
<tr>
<td align="left">MnO</td>
<td align="char" char=".">0.21</td>
<td align="char" char=".">0.66</td>
<td align="char" char=".">0.38</td>
<td align="char" char=".">0.45</td>
</tr>
<tr>
<td align="left">MgO</td>
<td align="char" char=".">4.66</td>
<td align="char" char=".">0.07</td>
<td align="char" char=".">2.99</td>
<td align="char" char=".">5.33</td>
</tr>
<tr>
<td align="left">Na<sub>2</sub>O</td>
<td align="char" char=".">4.02</td>
<td align="char" char=".">12.21</td>
<td align="char" char=".">7</td>
<td align="char" char=".">4.02</td>
</tr>
<tr>
<td align="left">K<sub>2</sub>O</td>
<td align="char" char=".">2.37</td>
<td align="left">-</td>
<td align="char" char=".">1.51</td>
<td align="char" char=".">1.86</td>
</tr>
<tr>
<td align="left">P<sub>2</sub>O<sub>5</sub>
</td>
<td align="char" char=".">0.93</td>
<td align="char" char=".">0.01</td>
<td align="char" char=".">0.6</td>
<td align="char" char=".">1.08</td>
</tr>
<tr>
<td align="left">Cl</td>
<td align="left">-</td>
<td align="left">-</td>
<td align="left">-</td>
<td align="char" char=".">0.88</td>
</tr>
<tr>
<td align="left">SO3</td>
<td align="left">-</td>
<td align="char" char=".">0.03</td>
<td align="char" char=".">0.01</td>
<td align="left">-</td>
</tr>
<tr>
<td align="left">TiO2</td>
<td align="left">-</td>
<td align="char" char=".">0.9</td>
<td align="char" char=".">0.33</td>
<td align="left">-</td>
</tr>
<tr>
<td align="left">Al<sub>2</sub>O<sub>3</sub>
</td>
<td align="left">-</td>
<td align="char" char=".">0.19</td>
<td align="char" char=".">0.07</td>
<td align="left">-</td>
</tr>
<tr>
<td align="left">CaO</td>
<td align="left">-</td>
<td align="char" char=".">1.52</td>
<td align="char" char=".">0.55</td>
<td align="left">-</td>
</tr>
<tr>
<td align="left">NiO</td>
<td align="left">-</td>
<td align="char" char=".">0.01</td>
<td align="char" char=".">0</td>
<td align="left">-</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>&#x2a;Composition from <xref ref-type="bibr" rid="B119">Schmidt et al., 2014</xref>.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>The major element composition of the aegirine (<xref ref-type="table" rid="T1">Table 1</xref>) was obtained from polished thin sections using a CAMECA SX100 Electron Microprobe (EMPA) operated with a spot size of 10&#xa0;mm, accelerating voltage of 20&#xa0;kV and a beam current of 20&#xa0;nA. Analysis of the basalt&#x2019;s major element composition (<xref ref-type="table" rid="T1">Table 1</xref>) was carried out on powdered samples using an ARL 8,420 &#x2b; dual goniometer wavelength-dispersive X-ray Fluorescence (XRF) spectrometer.</p>
<p>To produce the regolith simulant, the basalt and aegirine were separately crushed using a Tema swing mill, for 8&#xa0;min. The crushed materials were sieved to a fraction size of between 100&#xa0;&#x3bc;m and 250&#xa0;&#x3bc;m, the fine particles were removed by ultrasonication in MilliQ water (<xref ref-type="bibr" rid="B98">Olsson-Francis et al., 2010</xref>; <xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>), and the products were dried for 24&#xa0;h, at 80&#xa0;C and at 1 bar. The 100&#x2013;250&#xa0;&#x3bc;m size fraction was selected to include materials that have a grain size comparable to dust-size particles of the Martian regolith observed by Curiosity&#x2019;s Mars Hand Lens Imager instrument in sedimentary deposits at various locations at Gale crater (<xref ref-type="bibr" rid="B158">Minitti et al., 2013</xref>; <xref ref-type="bibr" rid="B144">Weitz et al., 2018</xref>). Moreover, the selection of a such small grain size was intended to speed up the formation of secondary minerals mitigating for the short duration of the dissolution experiments. The aegirine was mixed to the basalt in a 1.75:1 ratio to achieve an overall iron-rich composition similar to that of Rocknest basalt (<xref ref-type="bibr" rid="B119">Schmidt et al., 2014</xref>), which has 6.65&#xa0;wt% more Fe<sub>2</sub>O<sub>3(Tot)</sub> than the Le Cheix Puy de Dome basalt (<xref ref-type="table" rid="T1">Table 1</xref>).</p>
</sec>
<sec id="s2-2">
<title>2.2 Microbial community</title>
<p>A microbial community from the sub-surface intertidal anoxic zone of the River Dee, United Kingdom (53&#x2da;21&#x2032;15.40 N, 3&#x2da;10&#x2032;24.95&#xa0;W) was used for the biotic experiments. This mixed community was selected because it contains chemolithoautotrophic and chemoorganoheterotrophic microbes that are analogues for potential microbial life that may have existed in the fluvio-lacustrine environment at Gale Crater (<xref ref-type="bibr" rid="B4">Amils et al., 2007</xref>; <xref ref-type="bibr" rid="B60">Grotzinger et al., 2014</xref>; <xref ref-type="bibr" rid="B35">Curtis-Harper et al., 2018</xref>). The sample was collected as part of a previous study (<xref ref-type="bibr" rid="B35">Curtis-Harper et al., 2018</xref>). MiSeq sequencing demonstrated that the bacterial community was dominated by the families Hyphomicrobiaceae (28%), Flavobacteriaceae (23%), Alteromonadaceae (16%), whilst over 90% of the archaeal community was dominated by <italic>Thaumarchaeaota</italic> phylum (<italic>Nitrosopumilus</italic> genus) (<xref ref-type="bibr" rid="B35">Curtis-Harper et al., 2018</xref>) (<xref ref-type="table" rid="T2">Table 2</xref>).</p>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>Relative abundance of the bacterial families from the anoxic intertidal zone of the River Dee estuary. Data obtained from MiSeq DNA gene sequences. A detailed description and characterization of the microbial community and how it was sampled is given in <xref ref-type="bibr" rid="B35">Curtis-Harper et al. (2018)</xref>.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Bacterial families</th>
<th align="left">Proportion %</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Hyphomicrobiaceae</td>
<td align="char" char=".">28</td>
</tr>
<tr>
<td align="left">Flavobacteriaceae</td>
<td align="char" char=".">23</td>
</tr>
<tr>
<td align="left">Alteromonadaceae</td>
<td align="char" char=".">16</td>
</tr>
<tr>
<td align="left">Rhodobiaceae</td>
<td align="char" char=".">10</td>
</tr>
<tr>
<td align="left">Rhodobacteraceae</td>
<td align="char" char=".">6</td>
</tr>
<tr>
<td align="left">Acidimicrobiales</td>
<td align="char" char=".">6</td>
</tr>
<tr>
<td align="left">Caldilineaceae</td>
<td align="char" char=".">3</td>
</tr>
<tr>
<td align="left">Peptostreptococcaceae</td>
<td align="char" char=".">1</td>
</tr>
<tr>
<td align="left">Flammeovirgaceae</td>
<td align="char" char=".">1</td>
</tr>
<tr>
<td align="left">Nitrospiraceae</td>
<td align="char" char=".">1</td>
</tr>
<tr>
<td align="left">Desulfobacteraceae</td>
<td align="char" char=".">1</td>
</tr>
<tr>
<td align="left">Granulosicoccaceae</td>
<td align="char" char=".">1</td>
</tr>
<tr>
<td align="left">Rhodospirillaceae</td>
<td align="char" char=".">1</td>
</tr>
<tr>
<td align="left">Others</td>
<td align="char" char=".">2</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>The microbial enrichment was prepared by adding 5&#xa0;g of dry sediment to an anaerobic enrichment medium containing per litre: 2&#xa0;g of trypticase peptone (Sigma Aldrich), 2&#xa0;g of yeast extract (Sigma), 0.3&#xa0;g of KCl, 1&#xa0;g of NH<sub>4</sub>Cl, 3&#xa0;g of Na<sub>2</sub>SO<sub>4</sub>, 23&#xa0;g of NaCl, 0.5&#xa0;g of Na-Lactate, 2&#xa0;g of MgCl<sub>2</sub>, 0.35&#xa0;g of K<sub>2</sub>HPO<sub>4</sub>, 0.1&#xa0;g of Na-thioglycollate (C<sub>2</sub>H<sub>3</sub>NaO<sub>2</sub>S) and 0.1&#xa0;g of ascorbic acid (C<sub>6</sub>H<sub>8</sub>O<sub>6</sub>), and was prepared anaerobically, as previously described (<xref ref-type="bibr" rid="B65">Hungate, 1966</xref>). Vitamin solution (<xref ref-type="bibr" rid="B7">Balch et al., 1979</xref>) and SL10 trace element solution (<xref ref-type="bibr" rid="B150">Widdel et al., 1983</xref>) were added post-autoclaving (121&#xb0;C, 15&#xa0;psi, 15&#xa0;min). 100&#xa0;ml of medium was aseptically transferred (under anaerobic conditions) to sterilised Wheaton bottles (<xref ref-type="bibr" rid="B124">Speers et al., 2009</xref>), and after inoculation, the headspace was pressured to 2 bar with 80% CO<sub>2</sub>/20% H<sub>2</sub>. The cultures were incubated at 14&#xb0;C, for 700&#xa0;h (29&#xa0;days), and subsequently transferred twice to eliminate any crossover from the sediment.</p>
</sec>
<sec id="s2-3">
<title>2.3 Dissolution experiments</title>
<p>The dissolution experiments were conducted with a (W/R)<sub>E</sub> of 100/33 (we denote W/R<sub>E</sub> as the experimental water to rock ratio and denotes the amount of rock and the amount of water) with a nutrient-limited anaerobic minimal medium, which contained the following (per litre): 1&#xa0;g of NH<sub>4</sub>Cl, 2&#xa0;g of Na-lactate (C<sub>3</sub>H<sub>5</sub>NaO<sub>3</sub>), 1&#xa0;g of Na-thioglycollate (C<sub>2</sub>H<sub>3</sub>NaO<sub>2</sub>S), 1&#xa0;g of ascorbic acid (C<sub>6</sub>H<sub>8</sub>O<sub>6</sub>), 37&#xa0;g of NaCl, 13.25&#xa0;g of Na<sub>2</sub>CO<sub>3</sub>. To prepare the regolith simulant, 8.09&#xa0;g of basalt and 5.91&#xa0;g of aegirine were dispensed into acid-washed Wheaton bottles, which had been purged with N<sub>2</sub> to remove O<sub>2.</sub> The regolith was autoclaved at 121&#xa0;C for 15&#xa0;min and after cooling, 68&#xa0;ml of medium was added, and the pH was adjusted to pH 7.0 with filtered sterilised 10&#xa0;mM NaOH. For the inoculum, exponential phase cells were harvested by centrifugation (4,000 &#xd7; <italic>g</italic>, for 5&#xa0;min), washed, and resuspended in the minimal medium to give a final cell density of 10<sup>7</sup> to 10<sup>8</sup> cell&#xa0;mL<sup>&#x2212;1</sup>. A 1% inoculum was used for the biotic experiments (designated V1, V2, V3, V4 and V5) and abiotic controls were prepared in parallel (designated VA1, VA2, VA3, VA4 and VA5). The headspace of all of the Wheaton bottles were overpressured to 2 bar with 80% CO<sub>2</sub>/20% H<sub>2</sub>, prior to incubating at 15&#xa0;C for 700&#xa0;h. Microbial growth was measured every 24&#x2013;48&#xa0;h over the course of the 29&#xa0;days experiment (closed system simulation) using the acid-binding Sybr, as previously described by <xref ref-type="bibr" rid="B100">Olsson-Francis et al. (2017)</xref>. The duration of the dissolution experiment was also dictated by the experimental design (closed system simulation) that limited the availability of nutrients for microbes and by the fact that, interrupting the experiments after 700&#xa0;h (point at which the microbial community reached the stationary phase), it was avoided a reduction in abundance and diversity of microbes relating to the selection of specific metabolic groups. To monitor microbial growth in absence of the regolith simulant, experiment controls were also performed combining the microbial community and the minimal medium only. In such cases, no microbial growth was observed; for this reason, this aspect will not be further discussed.</p>
</sec>
<sec id="s2-4">
<title>2.4 Chemical analyses of the medium</title>
<p>An Orion 3-Star Thermo Scientific bench top meter with an uncertainty of 0.01 pH unit was used to measure the pH of the media. A Prodigy High Dispersion Inductively Coupled Plasma- Atomic Emission Spectrometer (ICP-AES) was used to measure the total elemental concentration of dissolved elements in the medium. In triplicates, 1&#xa0;ml aliquots were removed aseptically from each Wheaton bottle after 700&#xa0;h. The aliquots were centrifuged at 400 &#xd7; <italic>g</italic>, for 2&#xa0;min to eliminate any residual regolith simulant from the analytical sample, and then acidified using nitric acid (10%). Detection limits for the ICP-AES were defined as 3 times above blank level. The ICP-AES data were corrected for the loss of elemental mass during sampling and for the decrease in fluid volume, as described in <xref ref-type="bibr" rid="B154">Wu et al. (2007)</xref>.</p>
</sec>
<sec id="s2-5">
<title>2.5 Cellular elemental uptake</title>
<p>To measure the intracellular elemental concentration, 1&#xa0;ml aliquots were centrifugated (4,000 &#xd7; <italic>g</italic> for 2&#xa0;min) and the supernatant collected (to remove any excess regolith). The cells were harvested and washed three times in sterilised 0.5% HNO<sub>3</sub> by centrifugation (13,000 &#xd7; <italic>g</italic> for 10&#xa0;min) to remove excess media. The cells were acidified by resuspending the cells in 10% nitric acid. This allowed the elemental content of the cells to be measured using a Prodigy High Dispersion Inductively Coupled Plasma Atomic Emission Spectrometer (ICP-AES). The values obtained were multiplied by the number of cells measured at 700&#xa0;h and were corrected for the decrease in fluid volume during sampling, as previously described (<xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>; <xref ref-type="bibr" rid="B102">Olsson-Francis et al., 2012</xref>).</p>
</sec>
<sec id="s2-6">
<title>2.6 Characterization of the simulant after dissolution experiments</title>
<p>After 700&#xa0;h, the regolith simulant was removed from the Wheaton bottle, air-dried, and carbon coated (15&#x2013;20&#xa0;&#x3bc;m thickness) on aluminium stubs. The chemical composition and the morphological characteristics of the simulant were determined using a ZEISS Supra 55-VP Field Emission Gun - Secondary Emission Microscope (FEG-SEM) with an Energy Dispersive Spectroscopy (EDS) detector, which was operated at an accelerating voltage of 2&#x2013;15&#xa0;kV and a 7&#x2013;10&#xa0;mm working distance. Secondary electron images, backscatter electron images and EDS spectra obtained from FEG-SEM analysis were compared and used to identify the presence of secondary minerals that may be used as bio-signatures.</p>
</sec>
<sec id="s2-7">
<title>2.7 Thermochemical modelling</title>
<p>Thermochemical models were executed to identify reaction pathways, shifts in fluid chemistry and mineral formation that would occur over geological timescales under biotic and abiotic conditions in the considered fluid-rock systems. The code CHIM-XPT (previously CHILLER, <xref ref-type="bibr" rid="B116">Reed and Spycher, 2006</xref>; <xref ref-type="bibr" rid="B115">Reed et al., 2010</xref>) was used to perform stepwise titration simulations during which a specific amount of rock was titrated into a constant amount (1&#xa0;L) of the starting fluid. The model assumes complete rock dissolution and each titration step is in equilibrium, and therefore can be interpreted independently. The reaction progress is expressed as water to rock ratio (W/R), which represents the amount of rock reacted with the fluid. By modelling at different (W/R)<sub>M</sub> (water to rock ratio used in the models), the software simulates chemical reactions that may happen under different environmental conditions (e.g. <xref ref-type="bibr" rid="B114">Reed, 1982</xref>; <xref ref-type="bibr" rid="B48">Filiberto and Schwenzer, 2013</xref>; <xref ref-type="bibr" rid="B21">Bridges et al., 2015</xref>). At very high W/R (&#x223c;1,000,000), the model simulates an environment where a limited amount of rock react with a large mass of water (e.g., freshwater inflow, fluid percolating in a fracture, a rock surface exposed to regular precipitation), while at low W/R ratios (&#x3c;1,000), the model represents a scenario where a large volume of rock reacts with a limited volume of water (e.g., stagnant water table like in lacustrine-sediment settings). More information on the code and method and its application and limitations can be found in <xref ref-type="bibr" rid="B104">Palandri and Reed (2004)</xref>, <xref ref-type="bibr" rid="B116">Reed and Spycher (2006)</xref> and <xref ref-type="bibr" rid="B115">Reed et al. (2010)</xref>.</p>
<p>The input data for the thermochemical modelling included the Mars regolith simulant composition (<xref ref-type="table" rid="T1">Table 1</xref>) and the chemical composition of the minimal medium (<xref ref-type="table" rid="T3">Table 3</xref>). Elements in the fluid summarised in <xref ref-type="table" rid="T3">Table 3</xref> are given as component species and in the model calculation partitioned between several species as relevant to the pH and Eh conditions during the modeling. The code applies mass balance and mass action equations to calculate the equilibrium of secondary alteration mineral assemblages and fluid composition at different water/rock ratios. The modelling was carried out at 2 bar and 14&#xb0;C, which was used to simulate the pressure and temperature conditions of the growth experiment. The models were run over a range of (W/R)<sub>M</sub> ratios between 10<sup>5</sup> and 1. Three models were conducted: in the first, the pH was allowed to vary and was treated as a free parameter to simulate rock weathering in an abiotic environment. In the other two models, the pH was set at 7.0 and 7.4 to reproduce the minimum and maximum pH conditions observed during microbial growth experiments simulating weathering progression in presence of the considered bacterial community. Full data tables, minerals suppressed in the modelling because not stable at low P and T conditions (2 bar, 14&#xa0;C) or not forming in the simulated Martian environment and relative references are presented in <xref ref-type="sec" rid="s11">Supplementary Material</xref>.</p>
<table-wrap id="T3" position="float">
<label>TABLE 3</label>
<caption>
<p>Composition of the fluid used in the models.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Ion</th>
<th align="left">Concentration (moles)</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">H<sup>&#x2b;</sup>
</td>
<td align="char" char=".">0.2357</td>
</tr>
<tr>
<td align="left">O<sub>2</sub>
</td>
<td align="char" char=".">0.4802</td>
</tr>
<tr>
<td align="left">Cl<sup>&#x2212;</sup>
</td>
<td align="char" char=".">0.6518</td>
</tr>
<tr>
<td align="left">S<sup>&#x2212;</sup>
</td>
<td align="char" char=".">0.0088</td>
</tr>
<tr>
<td align="left">C</td>
<td align="char" char=".">0.2302</td>
</tr>
<tr>
<td align="left">Na<sup>&#x2b;</sup>
</td>
<td align="char" char=".">0.9097</td>
</tr>
<tr>
<td align="left">N<sup>&#x2b;</sup>
</td>
<td align="char" char=".">0.0187</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Species in the fluid are summarized in the table as one species, but during the modelling were partitioned into several dissolved species.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>3 Results</title>
<sec id="s3-1">
<title>3.1 Microbial growth</title>
<p>The microbial community grew in the minimal medium with the Mars regolith simulant as the sole source of bio-essential elements. Exponential growth occurred between 24&#xa0;h (1&#x2013;5&#xd7;10<sup>5</sup>&#xa0;cells&#xa0;mL<sup>&#x2212;1</sup>) and 300&#xa0;h (4&#x2013;7 &#xd7; 10<sup>6</sup> cells&#xa0;mL<sup>&#x2212;1</sup>) after inoculation (<xref ref-type="fig" rid="F1">Figure 1</xref>). After 300&#xa0;h, the cultures reached stationary phase and cells numbers remained relatively constant between 5 and 6 &#xd7; 10<sup>6</sup>&#xa0;cells&#xa0;mL<sup>&#x2212;1</sup> (<xref ref-type="fig" rid="F1">Figure 1</xref>). No growth was detected in the abiotic controls.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Mean pH value of the medium <bold>(A)</bold> and mean concentration of elements in the medium <bold>(B&#x2013;H)</bold> over the course of biotic and abiotic experiments, plotted in parallel to the logarithmic plot of cell density. Error bars represent the standard error of the mean for all series. Full data are listed in <xref ref-type="sec" rid="s11">Supplementary Material</xref>.</p>
</caption>
<graphic xlink:href="fspas-09-1062007-g001.tif"/>
</fig>
<p>In the biotic controls, the mean pH increased from 7.07 &#xb1; 0.08 to 7.36 &#xb1; 0.06 in the first 170&#xa0;h and then stabilised to 7.29 &#xb1; 0.02 until the end of the experiments (<xref ref-type="fig" rid="F1">Figure 1A</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>). For the abiotic controls, the pH increased from 6.98 &#xb1; 0.08 to 7.31 &#xb1; 0.08 (<xref ref-type="fig" rid="F1">Figure 1A</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>).</p>
</sec>
<sec id="s3-2">
<title>3.2 Regolith simulant dissolution</title>
<p>Simulant dissolution was measured by the concentration of key rock forming elements (Si, K, Ca, Mn, Mg, Al and Fe) released into the medium (<xref ref-type="fig" rid="F1">Figures 1B&#x2013;H</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>). The elemental concentrations in the fluid increased over time in both abiotic and biotic experiments. For the duration of the experiments, dissolved Si and Al had higher concentrations in the abiotic controls than the biotic experiments; Mg was higher in the biotic experiments, as shown in <xref ref-type="fig" rid="F1">Figure 1G</xref>, with a minimum and maximum difference of &#x223c;30&#xa0;&#x3bc;molL<sup>&#x2212;1</sup> and &#x223c;170&#xa0;&#x3bc;molL<sup>&#x2212;1</sup>, respectively, between the biotic and abiotic controls. The microbial growth phase influenced the dissolution of certain elements, e.g., after 300&#xa0;h (exponential growth), K was higher under biotic conditions, and the concentrations of Fe, Ca and Mn were higher in the biotic experiments than the abiotic experiments only during the late stationary phase (&#x3e;400&#x2013;500&#xa0;h).</p>
</sec>
<sec id="s3-3">
<title>3.3 Secondary alteration minerals</title>
<p>FEG-SEM with EDS was used to investigate secondary alteration products (secondary minerals, amorphous phases) formation and morphological changes on the surface of the simulant. Analysis of the abiotic samples demonstrated that the mineral surfaces showed little or no evidence of physical or chemical weathering (<xref ref-type="fig" rid="F2">Figures 2A&#x2013;C</xref>). Analysis of the regolith simulant from the biotic experiments showed some microbial attachment and evidence of chemical and physical changes on the mineral surfaces (<xref ref-type="fig" rid="F2">Figures 2D&#x2013;F</xref>). This included morphological steps observed along mineral cleavage plains and amorphous layers with smooth, rounded and undulate surfaces observed on top of some weathered grains (<xref ref-type="fig" rid="F2">Figure 2D</xref>). SEM-EDS analysis demonstrated that the amorphous layers were mainly composed of Fe, Si, O and Na with lower amounts of Cl, Ca and Al (<xref ref-type="fig" rid="F2">Figures 2E,F</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>
<bold>(A)</bold> FEG-SEM micrograph of the simulant after the abiotic experiment. Minimal alteration was observed along cleavage plains; <bold>(B)</bold> EDS spectrum of a mineral in the abiotic control; <bold>(C)</bold> EDS spectrum of a Na-enriched grains on top of the mineral. Na enrichment happened during sample drying before sample preparation; <bold>(D)</bold> FEG-SEM micrograph of the simulant after the biotic experiment. An amorphous layer on the surface of some crystals is evident; <bold>(E)</bold> EDS spectrum of the amorphous layer; <bold>(F)</bold> EDS spectrum of the mineral beneath the amorphous layer.</p>
</caption>
<graphic xlink:href="fspas-09-1062007-g002.tif"/>
</fig>
</sec>
<sec id="s3-4">
<title>3.4 Thermochemical modelling</title>
<p>
<xref ref-type="fig" rid="F3">Figures 3</xref>, <xref ref-type="fig" rid="F4">4</xref> show the changes in mineralogy and fluid compositions that would occur over geologically timescales under biotic and abiotic conditions as the weathering reactions advance and the (W/R)<sub>M</sub> ratios decrease from 10<sup>5</sup> to 1. <xref ref-type="table" rid="T4">Table 4</xref> shows all the minerals that precipitate in the abiotic and biotic models at different (W/R)<sub>M</sub> ratios. Variation in element concentration in the fluid that are not directly comparable with data from dissolution experiments but that are relevant for secondary minerals formation predicted by the models are reported in <xref ref-type="sec" rid="s11">Supplementary Material</xref>.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Secondary minerals predicted from the dissolution of the regolith simulant at 14&#xb0;C and 2 bar under abiotic and biotic conditions. <bold>(A)</bold> variation of the pH in the abiotic model; <bold>(B)</bold> abiotic model where the pH was set as a free parameter; <bold>(C)</bold> biotic model where the pH was set at 7.0; <bold>(D)</bold> biotic model where the pH was set at 7.4. The diagrams show the formation of pyrite, quartz, carbonate, talc, magnetite, goethite in different amounts and traces of chlorite, nontronite, apatite and kaolinite (not shown in the diagram since its abundance is &#x3c;&#x3c;1&#xa0;wt%). For more details on the variability of the minor phases (chlorite, nontronite, apatite and kaolinite) see supplementary materials A, B, C. The (W/R)<sub>D</sub> is represented by the shadowed area in between the two blue dotted vertical lines and it was calculated based on the element potassium because it is not incorporated into the microbes and into any of the expected mineral precipitates.</p>
</caption>
<graphic xlink:href="fspas-09-1062007-g003.tif"/>
</fig>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Fluid composition predicted from the dissolution of the regolith simulant at 14&#xb0;C and 2 bar. <bold>(A)</bold> pH variability in the abiotic model; <bold>(B)</bold> model with pH as a free parameter that varies between 9.5 and 12.7; <bold>(C)</bold> model with pH set at 7.0; <bold>(D)</bold> model with pH set at 7.4. Only elements relevant for a direct comparison between the models and the basalt dissolution experiments are shown in the diagrams (H<sub>4</sub>SiO<sub>4</sub>, Mg<sup>2&#x2b;</sup>, Mn<sup>2&#x2b;</sup>, K<sup>&#x2b;</sup>, Ca<sup>&#x2b;</sup>, Al<sup>3&#x2b;</sup>, Fe<sup>2&#x2b;</sup>). For more details on the variability of the other elements (Cl<sup>&#x2212;</sup>, HS<sup>&#x2212;</sup>, NH<sub>4</sub>
<sup>&#x2b;</sup>, Na<sup>&#x2b;</sup>, HCO<sub>3</sub>
<sup>&#x2212;</sup>, HPO<sub>4</sub>) see supplementary materials A, B, C. The (W/R)<sub>D</sub> is represented by the shadowed area in between the two blue dotted vertical lines and it was calculated based on the element potassium because it is not incorporated into the microbes and into any of the expected mineral precipitates.</p>
</caption>
<graphic xlink:href="fspas-09-1062007-g004.tif"/>
</fig>
<table-wrap id="T4" position="float">
<label>TABLE 4</label>
<caption>
<p>List of minerals that form in abiotic and biotic models at 14&#xb0;C, 2 bar between (W/R)<sub>M</sub> of 10<sup>6</sup> and 1.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Mineral</th>
<th align="left">Formula</th>
<th align="left">Abiotic model</th>
<th align="left">Biotic model (pH 7.0)</th>
<th align="left">Biotic model (pH 7.4)</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">pyrite</td>
<td align="left">FeS<sub>2</sub>
</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">quartz</td>
<td align="left">SiO<sub>2</sub>
</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">Hydroxy apatite</td>
<td align="left">Ca<sub>5</sub>(PO<sub>4</sub>)<sub>3</sub>OH</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">siderite</td>
<td align="left">FeCO<sub>3</sub>
</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">rhodochrosite</td>
<td align="left">MnCO<sub>3</sub>
</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">clinochlore</td>
<td align="left">Mg<sub>5</sub>Al<sub>2</sub>Si<sub>3</sub>O<sub>10</sub>(OH)<sub>8</sub>
</td>
<td align="left">X</td>
<td align="left"/>
<td align="left">X</td>
</tr>
<tr>
<td align="left">daphnite</td>
<td align="left">Fe<sub>5</sub>Al<sub>2</sub>Si<sub>3</sub>O<sub>10</sub>(OH)<sub>8</sub>
</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">Mn-chlorite</td>
<td align="left">Mn<sub>5</sub>Al<sub>2</sub>Si<sub>3</sub>O<sub>10</sub>(OH)<sub>8</sub>
</td>
<td align="left">X</td>
<td align="left"/>
<td align="left"/>
</tr>
<tr>
<td align="left">Na-nontronite</td>
<td align="left">Na<sub>0.3</sub>Fe<sub>2</sub> [(Si,Al)<sub>4</sub>O<sub>10</sub>] (OH)<sub>2</sub>&#xb7;nH<sub>2</sub>O</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">K-nontronite</td>
<td align="left">KFe<sub>2</sub> [(Si,Al)<sub>4</sub>O<sub>10</sub>] (OH)<sub>2</sub>&#xb7;nH<sub>2</sub>O</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">talc</td>
<td align="left">Mg<sub>3</sub>Si<sub>4</sub>O<sub>10</sub>(OH)<sub>2</sub>
</td>
<td align="left">X</td>
<td align="left"/>
<td align="left">X</td>
</tr>
<tr>
<td align="left">Fe-talc</td>
<td align="left">Fe<sub>3</sub>Si<sub>4</sub>O<sub>10</sub>(OH)<sub>2</sub>
</td>
<td align="left">X</td>
<td align="left"/>
<td align="left"/>
</tr>
<tr>
<td align="left">magnetite</td>
<td align="left">Fe<sub>3</sub>O<sub>4</sub>
</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">goethite</td>
<td align="left">FeO(OH)</td>
<td align="left">X</td>
<td align="left">X</td>
<td align="left">X</td>
</tr>
<tr>
<td align="left">kaolinite</td>
<td align="left">Al<sub>2</sub>Si<sub>2</sub>O<sub>5</sub>(OH)<sub>4</sub>
</td>
<td align="left"/>
<td align="left">X</td>
<td align="left"/>
</tr>
<tr>
<td align="left">huntite</td>
<td align="left">Mg<sub>3</sub>Ca(CO<sub>3</sub>)<sub>4</sub>
</td>
<td align="left"/>
<td align="left"/>
<td align="left">X</td>
</tr>
</tbody>
</table>
</table-wrap>
<sec id="s3-4-1">
<title>3.4.1 Abiotic model</title>
<p>The abiotic model (<xref ref-type="fig" rid="F3">Figure 3A</xref>) forms the baseline from which to compare the biotic models. From high to low (W/R)<sub>M</sub> ratios the secondary mineral assemblage became more complex. Pyrite formed at (W/R)<sub>M</sub> ratio of 10<sup>5</sup>, which was stable over the considered (W/R)<sub>M</sub> ratio range, and progressively decreased from 100&#xa0;wt% to &#x3c;1&#xa0;wt%. This reduction in pyrite coincided with other Fe-rich minerals forming and the (W/R)<sub>M</sub> ratio decreasing. Talc formed below a (W/R)<sub>M</sub> ratio of 100,000, it reached its maximum abundance (&#x223c;21&#xa0;wt%) at a (W/R)<sub>M</sub> ratio of 3,330 when quartz started to form. The values remained constant between 12&#xa0;wt% and 16&#xa0;wt% up to a (W/R)<sub>M</sub> ratio of 1. Between (W/R)<sub>M</sub> ratio of 3,300 and 500, pyrite (75&#x2013;40&#xa0;wt%), quartz (20&#x2013;47&#xa0;wt%), and talc (&#x223c;21&#x2014;12&#xa0;wt%) were the main precipitates. Siderite, which formed at (W/R)<sub>M</sub> ratio of 500 together with trace amounts of Fe-talc, reached a maximum abundance of &#x223c;31&#xa0;wt%, at a (W/R)<sub>M</sub> ratio of 55 and was no longer stable below a (W/R)<sub>M</sub> ratio of 20. Siderite coexisted with quartz (&#x223c;42&#x2013;50&#xa0;wt%), pyrite (&#x3c;2&#x2013;37&#xa0;wt%), talc (12&#x2013;14&#xa0;wt%), Fe-talc (&#x3c;1&#x2013;6&#xa0;wt%) and, below a (W/R)<sub>M</sub> ratio of 50, magnetite (&#x3c;5&#x2013;21&#xa0;wt%). Between (W/R)<sub>M</sub> ratios of 20 and 3, only minor variations (&#x3c;5&#xa0;wt%) in the abundance of quartz, magnetite, talc, Fe-talc and pyrite were observed. Magnetite reached its maximum abundance of 25&#xa0;wt% at a (W/R)<sub>M</sub> ratio of 3. Below this threshold, magnetite declined to 2&#xa0;wt%, while goethite started to form (8&#x2013;27&#xa0;wt%). Chlorite (clinochlore, daphnite, Mn-chlorite), carbonates (rhodochrosite), Na- and K-nontronite and hydroxyapatite also formed in trace amounts (&#x3c;3&#xa0;wt%) at various (W/R)<sub>M</sub> ratios.</p>
<p>The pH of the fluid varied between 9.5 and 12.7 over the course of the titration range (<xref ref-type="fig" rid="F4">Figure 4A</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>). The concentration of most of the dissolved elements and component species varied by, at least, two orders of magnitude except for Cl<sup>&#x2212;</sup>, HS<sup>&#x2212;</sup>, NH<sub>4</sub>
<sup>&#x2b;</sup>, Na<sup>&#x2b;</sup> and HCO<sub>3</sub>
<sup>&#x2212;</sup>, which were more stable and less variable (<xref ref-type="fig" rid="F4">Figure 4B</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>). The concentration of abundance of Mg<sup>2&#x2b;</sup>, Ca<sup>2&#x2b;</sup> and Al<sup>3&#x2b;</sup> generally decreased, while the amount of HPO<sub>4</sub>, H<sub>4</sub>SiO<sub>4</sub>, Mn<sup>2&#x2b;</sup>, K<sup>&#x2b;</sup> and Fe<sup>2&#x2b;</sup> generally increased (<xref ref-type="fig" rid="F4">Figure 4B</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>). Al<sup>3&#x2b;</sup> and Fe<sup>2&#x2b;</sup> were the most variable elements and showed more complex patterns (<xref ref-type="fig" rid="F4">Figure 4B</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>) that can be associated with the formation of variable amounts of Al- and Fe-rich phases in the considered titration range.</p>
</sec>
<sec id="s3-4-2">
<title>3.4.2 Biotic models</title>
<p>When the pH was set at 7.0 and 7.4 (simulating the small change in the buffered medium), the models (<xref ref-type="fig" rid="F3">Figures 3C,D</xref>) gave similar results in terms of secondary mineral assemblages and fluid chemistries. Pyrite was stable over the considered (W/R)<sub>M</sub> ratio range with its abundance progressively decreasing from 100&#xa0;wt% to &#x3c;1&#xa0;wt% when quartz started to form ((W/R)<sub>M</sub> ratio of &#x223c;100,000). Below this value, quartz increased and was the most abundant mineral phase at a (W/R)<sub>M</sub> ratio lower than 25,000 (a maximum value of 67&#xa0;wt% was measured at end of the titration range).</p>
<p>When the pH was fixed at 7.4, quartz reached its maximum abundance of 68.8&#xa0;wt% at a (W/R)<sub>M</sub> ratio of &#x223c;3. Quartz and pyrite were the major phases that formed between (W/R)<sub>M</sub> ratios of 100,000 and 500. Siderite precipitated only below a (W/R)<sub>M</sub> ratio of 500, together with quartz (&#x223c;62&#x2013;65&#xa0;wt%) and pyrite (&#x223c;35&#x2013;&#x3c; 1&#xa0;wt%). Siderite increased up to &#x223c;34&#xa0;wt% at a (W/R)<sub>M</sub> ratio of 11, and then started to decline. Below a (W/R)<sub>M</sub> ratio of 10, quartz continued to be stable with a maximum abundance of &#x223c;69&#xa0;wt%, siderite decreased from 34&#xa0;wt% to &#x3c;3&#xa0;wt%, and goethite reached its maximum concentration of around 22&#xa0;wt% at (W/R)<sub>M</sub> ratio of 1. Below (W/R)<sub>M</sub> of 10, magnetite formed (&#x3c;4&#xa0;wt%) when the pH was set at 7.0, while it reached 7&#xa0;wt% when the pH was set at 7.4. Huntite formed in traces (&#x3c;1&#xa0;wt%) only when the pH was set at 7.4 and between (W/R)<sub>M</sub> ratios of 50 and 24; whilst talc (&#x3c;7.5&#xa0;wt%) formed only when the pH was set at 7.4 below a (W/R)<sub>M</sub> of 3. Trace amounts (&#x3c;1&#x2013;3&#xa0;wt%) of chlorite (clinochlore, daphnite), carbonates (rhodochrosite), kaolinite, nontronite and hydroxyapatite were also formed at different (W/R)<sub>M</sub> ratios.</p>
<p>Most of the dissolved elements, here given as component species, varied in concentration by, at least, one order of magnitude with the exception of Cl<sup>&#x2212;</sup>, H<sub>4</sub>SiO<sub>4</sub>, NH<sub>4</sub>
<sup>&#x2b;</sup>and Na<sup>&#x2b;</sup> that were relatively stable (<xref ref-type="fig" rid="F4">Figures 4C,D</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>). HPO<sub>4</sub>, Mg<sup>2&#x2b;</sup>, Mn<sup>2&#x2b;</sup> and K<sup>&#x2b;</sup> steadily increased, while Ca<sup>2&#x2b;</sup> increased up to a (W/R)<sub>M</sub> ratio of &#x223c;1,000 and then decreased in concentration; HS<sup>&#x2212;</sup> and HCO<sub>3</sub>
<sup>&#x2212;</sup> decreased only at a (W/R)<sub>M</sub> ratio below 10 (<xref ref-type="fig" rid="F4">Figures 4C,D</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>); Al<sup>3&#x2b;</sup> decreased by five orders of magnitude below a (W/R)<sub>M</sub> ratio of 10 because it precipitates in Al-rich phases (chlorites) that form at the end of the (W/R)<sub>M</sub> ratio range (<xref ref-type="fig" rid="F4">Figures 4C,D</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>). Fe<sup>2&#x2b;</sup> showed a more complex pattern and a variation of more than 10 orders of magnitude between (W/R)<sub>M</sub> ratio of &#x223c;1,000 and &#x223c;1 (<xref ref-type="fig" rid="F4">Figures 4C,D</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>); this is correlated with the different amounts of Fe-rich minerals that formed in the considered (W/R)<sub>M</sub> ratio range.</p>
</sec>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>4 Discussion</title>
<sec id="s4-1">
<title>4.1 Experimental regolith simulant dissolution</title>
<p>In this study, variations in fluid chemistry, as well as mineralogical and morphological changes to a Martian regolith simulant, were investigated to identify inorganic bio-signatures produced by chemolithotrophic and chemoorganoheterotrophic microbes, which might be detected in the Martian rock-record and which might be analogue to those that may have lived in the fluvio-lacustrine system at Gale Crater on early Mars (e.g. <xref ref-type="bibr" rid="B35">Curtis-Harper et al., 2018</xref>).</p>
<p>ICP-AES analysis detected specific changes in the fluid chemistries that differed between the biotic and abiotic test groups, e.g., microbial mediated dissolution increased the dissolved concentrations of Mg, Fe, Mn, Ca and K. Previous studies demonstrated that excess protons and low molecular weight organic acids, produced as a by-product of microbial metabolism, can alter the pH of the fluid promoting the extraction of bio-essential elements from rocks (<xref ref-type="bibr" rid="B142">Vandevivere et al., 1994</xref>; <xref ref-type="bibr" rid="B76">Liermann et al., 2000</xref>; <xref ref-type="bibr" rid="B67">Huston and Logan, 2004</xref>; <xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>) and the formation of secondary alteration minerals (<xref ref-type="bibr" rid="B8">Banfield et al., 2001</xref>; <xref ref-type="bibr" rid="B14">Berg et al., 2020</xref>). In our study, changes in element concentration could not be solely ascribed to the pH differences between the abiotic and biotic experiments. Given that the pH of the media remained nearly neutral during biotic experiments because of the buffering capacity of the simulant, it is possible that organic acids may have enhanced mineral dissolution locally, e.g. in pore spaces and close to mineral surfaces, without changing the pH of the whole system. Micro-reaction zones have previously been identified at microbial binding sites and are associated with high concentrations of organic acids (<xref ref-type="bibr" rid="B63">Hiebert and Bennett, 1992</xref>; <xref ref-type="bibr" rid="B133">Thorseth et al., 1992</xref>; <xref ref-type="bibr" rid="B142">Vandevivere et al., 1994</xref>). Although there is little evidence of direct microbial attachment to the mineral surface it is still possible that elemental dissolution in the biotic experiments has occurred through direct contact of the microbes with the simulant, and also indirectly (<xref ref-type="bibr" rid="B63">Hiebert and Bennett, 1992</xref>; <xref ref-type="bibr" rid="B142">Vandevivere et al., 1994</xref>; <xref ref-type="bibr" rid="B8">Banfield et al., 2001</xref>; <xref ref-type="bibr" rid="B146">Welch et al., 2002</xref>; <xref ref-type="bibr" rid="B72">Konhauser, 2007</xref>; <xref ref-type="bibr" rid="B75">Lian et al., 2008</xref>; <xref ref-type="bibr" rid="B139">Uroz et al., 2009</xref>; <xref ref-type="bibr" rid="B52">Gadd, 2010</xref>). Differences between the amount of element dissolved in the fluid in this study and previous studies (<xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>; <xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>) could be explained by the inclusion of a buffer in the system that may have prevented elemental release as a result of high pH changes, or the use of a more complex microbial community instead of a single microbe type (<italic>Burkholderia sp. strain B_33</italic>&#x2014;<xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>; <italic>Burkholderia fungorum</italic> - <xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>). Heterotrophic microorganisms, such as <italic>Burkholderia fungorum</italic>, use organic compounds as source of energy and chemical equilibrium is more easily reached and dissolution is at minimum (<xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>). In a mixed community, that contains also chemolithotroph microorganisms which require chemical compounds and elements (sourced from the fluid and the rock) to produce energy, dissolution rates increase due to the pH being far from equilibrium (<xref ref-type="bibr" rid="B110">Ramkissoon et al., 2021</xref>).</p>
<p>Morphological steps observed along mineral cleavage plains and Fe-Si rich amorphous deposits (<xref ref-type="fig" rid="F2">Figure 2D</xref>) identified by SEM on the surfaces of some aegirine grains in the biotic experiments are, respectively, evidence of enhanced mineral weathering and secondary mineral deposition following microbial action (<xref ref-type="bibr" rid="B18">Brantley and Chen, 1995</xref>; <xref ref-type="bibr" rid="B11">Benzerara et al., 2004</xref>; <xref ref-type="bibr" rid="B13">Benzerara et al., 2005</xref>; <xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>). According to the elemental distribution in &#x201c;spectrum 5&#x201d; (<xref ref-type="fig" rid="F2">Figure 2E</xref>), the amorphous deposit may represent partially dissolved aegirine and the formation of non-crystalline Fe-rich secondary clay at the mineral surface, characteristic of an early stage of pyroxene weathering (<xref ref-type="bibr" rid="B92">Nahon and Colin, 1982</xref>). We interpret this as evidence for mineralogical changes specific to the biotic experiments as nothing comparable was observed in the abiotic experiments. Peaks detected for Ca, Na and Cl are interpreted as CaCl<sub>2</sub> and NaCl deposits precipitated on top of the Fe-Si rich amorphous layer during sample drying before SEM analysis.</p>
<p>Previous studies that used a naturally occurring, already altered, basalt as a Martian analogue observed similarities between secondary minerals formed during biotic laboratory experiments and those predicted by thermochemical models (<xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>). In our study, mineralogical features observed in the biotic samples and alteration phases predicted by biotic models are not directly comparable, as detailed analyses of secondary mineralisation formed experimentally were limited by the rarity of potential secondary minerals at detectable abundances. The use of an unweathered fresh basalt, of a small grain size (&#x3c;250&#xa0;&#x3bc;m) and the short duration of the experiments could have reduced the likelihood of alteration phase formation in our study, impeding a comparison with model results. Longer experimental run times in a simulated open-system environment would be needed to observe the development of a more complex alteration assemblage, the formation of larger quantities of secondary minerals and more pronounced alteration features that would be more easily detectable, and thus comparable with secondary minerals predicted by the biotic and abiotic models.</p>
</sec>
<sec id="s4-2">
<title>4.2 Thermochemical models of basalt dissolution</title>
<p>Thermochemical modelling was used to assist in the identification of possible inorganic bio-signatures, such as secondary alteration minerals and fluid chemistry variations, that form during microbial weathering of the Martian simulant over geological timescales in an aqueous system. To compare the experimental and model results, we focus on a specific (W/R)<sub>M</sub> range, between 100 and 38 (<xref ref-type="fig" rid="F3">Figures 3</xref>, <xref ref-type="fig" rid="F4">4</xref>), that is equivalent to the actual (W/R)<sub>D</sub> ratio interval of the growth experiments. The (W/R)<sub>D</sub> ratio is defined as the amount of regolith dissolved during the experiments; it was assessed by focusing on the most soluble elements (e.g. K<sup>&#x2b;</sup>) in the fluids resulting from the experiments and calculated as outlined in <xref ref-type="bibr" rid="B100">Olsson-Francis et al. (2017)</xref>. K<sup>&#x2b;</sup> was specifically selected because it is not incorporated into microbial cells or (in large amounts) into any of the minerals predicted to precipitate by the models (see Results section). The (W/R)<sub>M</sub> ratio range considered here (between 100 and 38) is also equivalent to a lacustrine-sedimentary setting where a limited amount of water interacts with a large volume of rock. As described in detail earlier, similar environments have been identified by rover missions at Gale and Jezero Craters (<xref ref-type="bibr" rid="B60">Grotzinger et al., 2014</xref>; <xref ref-type="bibr" rid="B143">Vaniman et al., 2014</xref>; <xref ref-type="bibr" rid="B82">Mangold et al., 2021</xref>) and are proposed as sites that could have supported microbial life in early Martian&#x2019;s history (<xref ref-type="bibr" rid="B111">Rampe et al., 2020</xref>).</p>
<p>Under lacustrine-sedimentary conditions, a less complex secondary mineral assemblage forms during biotic dissolution compared to abiotic, where more mineral species precipitate (<xref ref-type="fig" rid="F3">Figure 3</xref>). The models show that under biologically-mediated conditions, high amounts of quartz and carbonates (mainly siderite, but also traces of rhodochrosite and huntite) coexist with minor amounts of Fe-sulfides (pyrite) and trace amounts of phosphates (hydroxyapatite), whereas the abiotic system would also precipitate Fe-oxides (magnetite) and various amounts of phyllosilicate minerals (talc, chlorites, nontronite). Less chemically and mineralogically complex secondary mineral assemblages seem to be common features of basalt-fluid interactions under biotic conditions at 1 bar and temperature &#x2264;25&#xa0;C (<xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>), well below the threshold at which life can exist (&#x3c;121&#xb0;C, e.g., <xref ref-type="bibr" rid="B34">Conrad, 2014</xref>; <xref ref-type="bibr" rid="B32">Cockell et al., 2016</xref>).</p>
<p>The differences in the fluid compositions between an abiotic and a biotic environment are more pronounced in the models, where rock dissolution is simulated for longer periods of time (e.g., geological timescales), than in laboratory experiments which investigate rock alteration only for a few weeks. Within the considered (W/R)<sub>M</sub> ratio range between 100 and 38, that simulates lacustrine-sedimentary conditions, K, Si and Mn were observed in similar concentrations (10<sup>&#x2212;3</sup> mol, 10<sup>&#x2212;4</sup>&#xb0;mol and 10<sup>&#x2212;4</sup>&#xb0;mol, respectively) in the biotic models as in the growth experiments (<xref ref-type="fig" rid="F1">Figures 1</xref>, <xref ref-type="fig" rid="F4">4</xref>, <xref ref-type="sec" rid="s11">Supplementary Material</xref>), suggesting that these elements are used by the microbes only in minimal amounts and that their behaviour is similar during short- and long-term biotic weathering. This is also supported by the fact that the cellular elemental uptake measured after biotic experiments was below the detection limits (<xref ref-type="sec" rid="s11">Supplementary Material</xref>). Mg remains lower in the experimental fluid compared to model results. This could be related to microbial activity that impedes elemental dissolution by producing amorphous layers on top of some minerals (e.g., pyroxene) (<xref ref-type="bibr" rid="B11">Benzerara et al., 2004</xref>; <xref ref-type="bibr" rid="B13">Benzerara et al., 2005</xref>), promoting adsorption of polysaccharides onto mineral surfaces (<xref ref-type="bibr" rid="B145">Welch et al., 1999</xref>), producing high-molecular-weight polymers (<xref ref-type="bibr" rid="B148">Welch and Vandevivere, 1994</xref>) and preventing the formation of etch-pits (<xref ref-type="bibr" rid="B78">L&#xfc;ttge and Conrad, 2004</xref>). According to model results, Mg would not precipitate in large amounts in secondary minerals predicted to form under biotic conditions, and it would accumulate in the fluid during long-term regolith alteration. Fe, Ca and Al contents were higher in the experimental fluids than in the modelled fluids, suggesting that biological activity is a limiting factor for precipitation of these elements during short-term weathering.</p>
<p>Inhibition of precipitation could be related to different processes associated to specific biological functions. Microbes take up specific bio-essential elements (oxygen or phosphate) to form inorganic or organic compounds, including proteins and siderophores, that are used for internal vital processes; the production of polysaccharides and other extracellular polymeric substances is another way of how microbes can attract and use bio-essential elements for their external functions; finally, microbes also use various chemicals to produce and release organic compounds such as low molecular weight organic acids (<xref ref-type="bibr" rid="B147">Welch and Ullman, 1993</xref>; <xref ref-type="bibr" rid="B142">Vandevivere et al., 1994</xref>; <xref ref-type="bibr" rid="B9">Barker and Banfield, 1998</xref>; <xref ref-type="bibr" rid="B70">Kalinowski et al., 2000</xref>; <xref ref-type="bibr" rid="B10">Bennet et al., 2001</xref>; <xref ref-type="bibr" rid="B154">Wu et al., 2007</xref>; <xref ref-type="bibr" rid="B139">Uroz et al., 2009</xref>; <xref ref-type="bibr" rid="B52">Gadd, 2010</xref>; <xref ref-type="bibr" rid="B97">Olsson-Francis et al., 2015</xref>). These processes would prevent solubility limits being reached, impeding the precipitation of secondary minerals that could form in the considered water-rock system during long-term dissolution. As predicted by the models, these phases could be pyrite (FeS<sub>2</sub>), siderite (FeCO<sub>3</sub>), hydroxyapatite (Ca<sub>5</sub>(PO<sub>4</sub>)<sub>3</sub>OH) and Al-rich minerals (kaolinite, Al<sub>2</sub>SiO<sub>5</sub>(OH)<sub>4</sub>).</p>
</sec>
<sec id="s4-3">
<title>4.3 Alteration minerals and life detection on Mars</title>
<p>Fe-phyllosilicates (nontronite and chlorite) and Fe-oxide (magnetite), predicted by thermochemical modelling to form only under abiotic conditions, have been found at several sites on Mars (<xref ref-type="bibr" rid="B43">Ehlmann et al., 2009</xref>; <xref ref-type="bibr" rid="B28">Carter et al., 2013</xref>; <xref ref-type="bibr" rid="B41">Ehlmann and Edwards, 2014</xref>; <xref ref-type="bibr" rid="B111">Rampe et al., 2020</xref>). Chlorite is an uncommon alteration mineral at very low-temperature since it forms preferentially in diagenetic and low-temperature metamorphic environments. However, it is thought to be authigenic in weathered sedimentary deltaic sandstones at 20&#x2013;40&#xa0;C (<xref ref-type="bibr" rid="B57">Grigsby, 2001</xref>) and has been found widespread on Mars (<xref ref-type="bibr" rid="B44">Ehlmann et al., 2011</xref>). Talc is also predicted by the abiotic model to form but its presence on Mars is still uncertain (<xref ref-type="bibr" rid="B23">Bristow et al., 2021</xref>). Talc is usually associated to higher temperature regimes (hydrothermal alteration) and metamorphic conditions; however, talc can be also authigenic in sedimentary deposit (<xref ref-type="bibr" rid="B135">Tosca et al., 2011</xref> and references therein) or, as demonstrated in laboratory test performed at ambient conditions, it can precipitate as a secondary product in low-temperature aqueous systems as a precursor of Mg-rich carbonate deposits (<xref ref-type="bibr" rid="B19">Bricker et al., 1973</xref>; <xref ref-type="bibr" rid="B135">Tosca et al., 2011</xref>). In all these cases, talc precipitation seems strongly controlled by the pH and favoured under alkaline conditions (<xref ref-type="bibr" rid="B135">Tosca et al., 2011</xref>). Carbonate minerals (e.g., siderite and rhodochrosite) characteristic of both biotic and abiotic models have been observed in Martian meteorites (e.g., nakhlites, <xref ref-type="bibr" rid="B30">Changela and Bridges 2011</xref>; <xref ref-type="bibr" rid="B88">Melwani Daswani et al., 2016</xref>; <xref ref-type="bibr" rid="B20">Bridges et al., 2019</xref>) and by orbiting spacecraft and rovers on the Martian surface at various locations (e.g., Gale and Jezero Craters, <xref ref-type="bibr" rid="B24">Bultel et al., 2019</xref>; <xref ref-type="bibr" rid="B20">Bridges et al., 2019</xref>; <xref ref-type="bibr" rid="B132">Thorpe et al., 2020</xref>; <xref ref-type="bibr" rid="B5">Archer et al., 2020</xref>; <xref ref-type="bibr" rid="B64">Horgan et al., 2020</xref>). Other alteration minerals predicted to form under biotic and abiotic conditions such as quartz, pyrite and hydroxyapatite have also been discovered (<xref ref-type="bibr" rid="B143">Vaniman et al., 2014</xref>; <xref ref-type="bibr" rid="B111">Rampe et al., 2020</xref>). The carbonates huntite, which precipitates in trace amounts only in the biotic model at pH of 7.4, has not been directly observed on Mars, although it has been inferred to occur in Nili Fossae region (<xref ref-type="bibr" rid="B105">Palomba et al., 2009</xref>). However, since it can form at surface temperatures and pressures in fluvial-lacustrine evaporitic environments or as an alteration mineral in basalts weathered by cold solutions rich in Mg, Ca and carbonic acid (<xref ref-type="bibr" rid="B71">Kinsman 1967</xref>; <xref ref-type="bibr" rid="B33">Cole and Lancucki, 1975</xref>; <xref ref-type="bibr" rid="B126">Stanger and Neal, 1994</xref>; <xref ref-type="bibr" rid="B2">Akbulut and Kadir, 2003</xref>), it is likely to be present in ancient Martian systems similar to Gale and Jezero Craters. Huntite, could be particularly difficult to detect on Mars (especially if present in low amounts) since it is metastable at surface temperature (<xref ref-type="bibr" rid="B53">Garrels et al., 1960</xref>; <xref ref-type="bibr" rid="B71">Kinsman, 1967</xref>) and it is replaced with time by magnesite (<xref ref-type="bibr" rid="B71">Kinsman, 1967</xref>; <xref ref-type="bibr" rid="B125">Spotl and Burns, 1994</xref>; <xref ref-type="bibr" rid="B84">Marini, 2007</xref>), a more stable Mg-carbonate that is present on the Martian ground together with siderite, calcite, rhodochrosite and other Mg- and Fe-bearing alteration minerals (<xref ref-type="bibr" rid="B42">Ehlmann et al., 2008</xref>; <xref ref-type="bibr" rid="B93">Niles et al., 2013</xref>; <xref ref-type="bibr" rid="B55">Goudge et al., 2015</xref>). Finally, alteration phases predicted to form in the biotic system (siderite, rhodochrosite, quartz, pyrite, hydroxyapatite) are all minerals that naturally can precipitate in near-neutral pH aqueous environments at ambient temperature following the action of microbes (<xref ref-type="bibr" rid="B74">Lee et al., 2007</xref>; <xref ref-type="bibr" rid="B46">Ehrlich and Newman, 2009</xref>; <xref ref-type="bibr" rid="B129">Sun et al., 2014</xref>; <xref ref-type="bibr" rid="B37">Duverger et al., 2020</xref>).</p>
<p>The results of this study provide indications of which mineralogical and geochemical features need to be investigated when searching for inorganic bio-signature on Mars. Alteration effects and mineral deposits of such small scale (&#x3c;15&#xa0;&#x3bc;m) would be difficult, if not impossible, to be observed <italic>in-situ</italic> using the instruments on board of Martian rovers (Mars Hand Lens Imager instrument aboard Curiosity rover has a resolution up to 13.9 microns/pixel) (e.g. <xref ref-type="bibr" rid="B39">Edgett et al., 2012</xref>; <xref ref-type="bibr" rid="B3">Allwood et al., 2020</xref>). However, such information and observations are relevant for searching for the most likely sites to find putative life. The chemical changes associated with the observations in this study, while not resolved in the detail required to analyse them, might still be indicated through gradients and deviations from baseline mineral observations in spatially resolved techniques such as the Planetary Instrument for X-Ray Lithochemistry (PIXL) on Perseverance (<xref ref-type="bibr" rid="B3">Allwood et al., 2020</xref>). Moreover, a complex mineralogical assemblage and secondary minerals large enough to be detected by rovers&#x2019; instruments are likely to have been formed in a natural Martian environment where the interaction between the substrate and the microbes, if ever been present, would have been prolonged over longer periods. Therefore, the results of this study are required for potentially informing the current sampling activities operated by the Perseverance rover, for planning future life detection missions and for interpreting the results of the analysis of Martian samples recovered by future sample return missions.</p>
</sec>
</sec>
<sec sec-type="conclusion" id="s5">
<title>5 Conclusion</title>
<p>In this study, laboratory-based experiments and thermochemical modelling were combined to investigate inorganic bio-signatures formed by an analogue microbial community from an anoxic inter-tidal zone of a Martian analogue fluvio-lacustrine system and that could be used as evidence in the search for life in early Martian lacustrine-sedimentary systems. Analogue microorganisms used in dissolution experiments were able to grow under environment conditions that were similar to that of the Gale Crater&#x2019;s aqueous environment at Yellowknife Bay. The analysis of simulated Martian water-rock systems after dissolution experiments identified mineralogical, microscopic and geochemical changes characteristic to the biotic test group that could be interpreted as potential bio-signatures. These changes are likely to be caused by the action of anaerobic microbes, analogues to those that could have existed in early Gale Crater aqueous system and would have enhanced mineral weathering and promoted secondary mineral formation. Thermochemical modelling has highlighted more significant differences between fluid chemistries and secondary alteration minerals that would form in reducing biotic and abiotic systems over geological time scales. Under biomediated lacustrine-sedimentary conditions, a &#x2018;simpler&#x2019; mineral assemblage is predicted to precipitate during long-term weathering. Quartz, carbonates and Fe-sulfides are the main secondary minerals to form under biotic conditions, whereas in the abiotic system Fe-oxides and phyllosilicate, in addition to the aforementioned minerals, also precipitate. Since Gale and Jezero Craters are the targets of current and future <italic>in-situ</italic> Mars exploration missions, identification and characterisation of geochemical bio-signatures produced by analogue microbial communities from terrestrial fluvio-lacustrine systems is important to determine the potential habitability of similar environments on early Mars. The results of this study reinforce the necessity to use complex analogue microbial communities and to combine laboratory experiments with thermochemical modelling when investigating the formation of inorganic bio-signatures that form over geological timescales, particularly where those studies may inform the search for habitable environments. The results obtained here, alone, may be not sufficient as unambiguous bio-signatures for life detection on Mars. However, they could be used in conjunction with other geological, geochemical and biological evidence to assess the presence of life in ancient Martian environments. More studies are required in order to build a more comprehensive body of evidence that can be used to identify, unambiguously, inorganic bio-signatures on Mars. Considering the outcomes of this and previous studies (<xref ref-type="bibr" rid="B100">Olsson-Francis et al., 2017</xref>), we want to empathise and tress that only using a more holistic approach that combines experimental microbiology, analytical geochemistry and thermochemical modelling, similarly to what was applied in this study, it will be possible to fully understand the evolution of fluid and rock chemistries under biotic conditions and geochemical bio-signatures formation in low-temperature aqueous systems on early Mars. In this context, thermochemical modelling represents an essential tool that allows to investigate reaction pathways and secondary minerals even at low-temperature when slow reaction rates make their study difficult under laboratory conditions.</p>
<p>Future work, employing a manufactured, multi-component simulant with a mineralogical and chemical composition more similar to the Rocknest basalt at Gale Crater (OUCM-1&#x2014;<xref ref-type="bibr" rid="B109">Ramkissoon et al., 2019</xref>) and a microbial community that more likely to represent life on early Mars (as discussed in Macey et al., in review), could increase the fidelity of the type of inorganic bio-signatures (e.g., the secondary mineral assemblage) that a microbial community could develop under simulated Martian conditions. Also, the use a wider range of analytical techniques (e.g., NIR, FTIR, XRD, XPS, Raman Spectroscopy) relevant to either current (NASA&#x2019;s Mars Science Laboratory and Mars Perseverance) and future (ESA&#x2019;s Rosalind Franklin) Mars missions could help to better characterize the chemical, mineralogical and physical changes that occur on the simulant surface after dissolution experiments. This will inform the possible recognition of inorganic bio-signatures during ongoing exploration missions and the analysis of samples recovered by a future sample return mission.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s6">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s11">Supplementary Material</xref>, further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s7">
<title>Author contributions</title>
<p>SC carried out the thermochemical modelling and interpreted the results and led the writing of the manuscript; EW carried out the microbiology experiments and analyses, the FEG-SEM work and the geochemical analyses; NR carried out preliminary thermochemical modelling and took part in manuscript revision; KO-F conceptualized and supervised the study, took part in microbial data analysis and manuscript writing; SS assisted in conceptualizing and supervising the study, took part in the interpretation of the thermochemical model results; VP assisted in supervising the study and took part in manuscript writing.</p>
</sec>
<sec id="s8">
<title>Funding</title>
<p>This work was supported by Research England Expanding Excellence in England (E3) fund (Grant code 124.18), as well as an STFC funded studentship awarded to EW, and United Kingdom Space Agency grant ST/S001522/1 to SS.</p>
</sec>
<sec sec-type="COI-statement" id="s9">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<sec id="s11">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fspas.2022.1062007/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fspas.2022.1062007/full&#x23;supplementary-material</ext-link>
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