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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Anim. Sci.</journal-id>
<journal-title>Frontiers in Animal Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Anim. Sci.</abbrev-journal-title>
<issn pub-type="epub">2673-6225</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fanim.2024.1367210</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Animal Science</subject>
<subj-group>
<subject>Brief Research Report</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Ketosis risk derived from mid-infrared predicted traits and its relationship with herd milk yield, health and fertility</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>K&#xf6;ck</surname>
<given-names>Astrid</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2604800"/>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/formal-analysis/"/>
<role content-type="https://credit.niso.org/contributor-roles/methodology/"/>
<role content-type="https://credit.niso.org/contributor-roles/visualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Dale</surname>
<given-names>Laura Monica</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Werner</surname>
<given-names>Andreas</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2660441"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Mayerhofer</surname>
<given-names>Martin</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
<role content-type="https://credit.niso.org/contributor-roles/data-curation/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Auer</surname>
<given-names>Franz-Josef</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Egger-Danner</surname>
<given-names>Christa</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/2066718"/>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/"/>
<role content-type="https://credit.niso.org/contributor-roles/funding-acquisition/"/>
<role content-type="https://credit.niso.org/contributor-roles/project-administration/"/>
<role content-type="https://credit.niso.org/contributor-roles/supervision/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/"/>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>ZuchtData EDV-Dienstleistungen GmbH</institution>, <addr-line>Vienna</addr-line>, <country>Austria</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Regional State Association for Performance and Quality Inspection in Animal Breeding of Baden W&#xfc;rttemberg</institution>, <addr-line>Stuttgart</addr-line>, <country>Germany</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>LKV-Austria</institution>, <addr-line>Vienna</addr-line>, <country>Austria</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Oleksiy Guzhva, Swedish University of Agricultural Sciences, Sweden</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Vincenzo Lopreiato, University of Messina, Italy</p>
<p>Fabio Abeni, Consiglio per la Ricerca in Agricoltura e l&#x2019;Analisi dell&#x2019;Economia Agraria (CREA), Italy</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Astrid K&#xf6;ck, <email xlink:href="mailto:koeck@zuchtdata.at">koeck@zuchtdata.at</email>
</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>19</day>
<month>04</month>
<year>2024</year>
</pub-date>
<pub-date pub-type="collection">
<year>2024</year>
</pub-date>
<volume>5</volume>
<elocation-id>1367210</elocation-id>
<history>
<date date-type="received">
<day>08</day>
<month>01</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>12</day>
<month>03</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2024 K&#xf6;ck, Dale, Werner, Mayerhofer, Auer and Egger-Danner</copyright-statement>
<copyright-year>2024</copyright-year>
<copyright-holder>K&#xf6;ck, Dale, Werner, Mayerhofer, Auer and Egger-Danner</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Milk analysis using mid-infrared spectroscopy (MIR) is a fast and inexpensive way of examining milk samples on a large scale for fat, protein, lactose, urea and many other novel traits. A new indicator trait for ketosis, KetoMIR, which is based on clinical ketosis diagnoses and MIR-predicted traits, was developed by the Regional State Association for Performance and Quality Inspection in Animal Breeding of Baden W&#xfc;rttemberg in 2015. The KetoMIR result is available for each cow at milk recording during the first 120 days in milk and presented to farmers in three classes: 1 = low ketosis risk, 2 = moderate ketosis risk and 3 = high ketosis risk. The aim of the current study was to analyze the phenotypic relationships between KetoMIR and milk yield, fertility and health at the herd level. Annual herd reports from 12,909 herds with an average herd size of 27 cows were available for the analyses. Overall, the mean incidence of ketosis (KetoMIR risk class 2 or 3) at the herd level was 14.0%. Farms with the lowest ketosis risk (&#x2264;10% of cows in the herd with a moderate or high ketosis risk) differed in all variables from the farms with the highest ketosis risk (&gt;50% of cows in the herd with a moderate or high ketosis risk). The increased ketosis risk based on KetoMIR was associated with lower average herd milk yield (-1,975 kg milk). Mean herd somatic cell count in first and higher lactations was increased by 60,500 and 134,400 cells/ml, respectively. The interval from calving to first service was prolonged by +36.5 days, as was the calving interval with +58.2 days. The newly developed KetoMIR trait may be used in ketosis prevention programs.</p>
</abstract>
<kwd-group>
<kwd>ketosis</kwd>
<kwd>mid infrared spectra</kwd>
<kwd>milk components</kwd>
<kwd>herd management</kwd>
<kwd>dairy cattle</kwd>
</kwd-group>
<counts>
<fig-count count="1"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="27"/>
<page-count count="5"/>
<word-count count="2398"/>
</counts>
<custom-meta-wrap>
<custom-meta>
<meta-name>section-in-acceptance</meta-name>
<meta-value>Precision Livestock Farming</meta-value>
</custom-meta>
</custom-meta-wrap>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>    <p>Ketosis is one of the most common metabolic diseases of dairy cows and occurs at the beginning of lactation. The incidence of clinical ketosis is low and is only 1.3% in Austria (<xref ref-type="bibr" rid="B13">F&#xfc;rst-Waltl and Schwarzenbacher, 2021</xref>). Subclinical ketosis occurs much more frequently but is not routinely recorded. <xref ref-type="bibr" rid="B11">Egger-Danner et&#xa0;al. (2016)</xref> and <xref ref-type="bibr" rid="B19">Liebminger (2021)</xref> reported that 10 to 20% of cows in Austria are affected with subclinical ketosis. The range of ketosis incidence differs for each country, as for example in the Netherlands, much higher values were reported by <xref ref-type="bibr" rid="B25">Vanholder et&#xa0;al. (2015)</xref> in 23 dairy farms, 11.6% of cows had clinical ketosis and 47.2% had subclinical ketosis. <xref ref-type="bibr" rid="B18">Lean et&#xa0;al. (2023)</xref> conducted a retrospective meta-analysis based on individual cow data from Australia, Canada and the United States. They reported the incidence of clinical ketosis was 3.3%, whereas the incidence of subclinical ketosis was 26.8%.</p>
<p>Ketosis can be diagnosed by measuring ketone bodies present in blood, urine, or milk. Various handheld blood ketone meters are available to farmers to detect cows with subclinical ketosis (e.g. <xref ref-type="bibr" rid="B23">Sailer et&#xa0;al., 2018</xref>; <xref ref-type="bibr" rid="B16">Khol et&#xa0;al., 2019</xref>). However, due to practical limitations associated with individual blood sampling and testing, routine screening of all at-risk animals with blood tests is not feasible. Analysis of individual milk samples by mid-infrared (MIR) spectrometry remains the most promising method for detecting ketosis because it allows complete screening of the health status of the animal and the herd (<xref ref-type="bibr" rid="B2">Benedet et&#xa0;al., 2019</xref>). In recent years, many novel MIR-predicted traits related to metabolic health have been derived (<xref ref-type="bibr" rid="B9">de Roos et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B14">Grelet et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B12">Franceschini et&#xa0;al., 2022</xref>). A new ketosis risk indicator trait, KetoMIR, based on clinical ketosis diagnoses and MIR-predicted traits, was developed at the Regional State Association for Performance and Quality Inspection in Animal Breeding of Baden W&#xfc;rttemberg as part of the OptiMIR project (<xref ref-type="bibr" rid="B15">Hamann et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B10">Dr&#xf6;ssler et&#xa0;al., 2018</xref>). The new ketosis risk indicator is intended as a herd management tool that allows farmers to monitor the metabolic situation of their herd during the first 120 days of lactation. In Baden-W&#xfc;rttemberg, KetoMIR has been routinely used since 2015, and in Austria since 2017. The aim of the present study was to investigate the relationship of ketosis risk based on KetoMIR with milk yield, health and fertility at herd level in Austrian dairy farms. For this purpose, the phenotypic associations between these traits were analyzed.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<title>Materials and methods</title>
<sec id="s2_1">
<title>Description of KetoMIR</title>
<p>The trait KetoMIR was developed at the Regional State Association for Performance and Quality Inspection in Animal Breeding of Baden W&#xfc;rttemberg as part of the OptiMIR project (<xref ref-type="bibr" rid="B15">Hamann et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B10">Dr&#xf6;ssler et&#xa0;al., 2018</xref>). The new trait was derived based on clinical ketosis diagnoses and MIR-predicted traits. The model used is a logistic regression and includes nine MIR-predicted traits to predict ketosis risk, including standard milk components, ketone bodies, fatty acids and minerals. A more detailed description of the MIR-predicted traits included in the model cannot be given for reasons of confidentiality. Lactation number, lactation week, breed and sampling time (mixed, morning, evening) are included as fixed effects in the model. The result from the logistic regression model is a continuous value between 0 and 1. The KetoMIR result is available for each cow at milk recording during the first 120 days in milk and is presented to farmers in three classes. Class 1 indicates low ketosis risk (0-0.5), class 2 indicates moderate ketosis risk (&gt;0.5-0.75), and class 3 indicates high ketosis risk (&gt;0.75). A more detailed description of the model can be found in <xref ref-type="bibr" rid="B15">Hamann et&#xa0;al. (2017)</xref> and <xref ref-type="bibr" rid="B10">Dr&#xf6;ssler et&#xa0;al. (2018)</xref>.</p>
</sec>
<sec id="s2_2">
<title>Data</title>
<p>Annual herd reports from 2017 were provided by ZuchtData (Vienna, Austria), which included herd reports from all Austrian dairy herds under milk recording (in total 21,342 herds). Herds with less than 10 cows and missing data were deleted, which resulted in 12,909 herds. For analyses, herd reports from 12,909 herds with an average herd size of 27 cows were available.</p>
<p>The annual herd reports provide the basis for evaluating the general performance, health and fertility of the herds. The following herd variables were available in the reports: herd means for milk yield, somatic cell count, interval from calving to first insemination and calving interval (see a more detailed description in <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). Additionally, the proportion of test-day records with a moderate or high ketosis risk (KetoMIR risk class 2 or 3) within the first 120 days in milk was available for each herd for the year 2017. A summary statistic of the analyzed traits is given in <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Definition of herd variables in Austrian annual herd reports, number of herds and herd mean values for KetoMIR (% of cows in the herd with a moderate or high ketosis risk), milk yield, somatic cell count, calving-to-first-service-interval and calving interval.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left">Herd variables</th>
<th valign="middle" align="left">Definition</th>
<th valign="middle" align="left">N</th>
<th valign="middle" align="left">Herd mean</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="middle" align="left">KetoMIR</td>
<td valign="middle" align="left">% of test-day records with a moderate or high ketosis risk (5-120 DIM), %</td>
<td valign="middle" align="left">12,909</td>
<td valign="middle" align="left">14.0</td>
</tr>
<tr>
<td valign="middle" align="left">Milk yield</td>
<td valign="middle" align="left">Mean herd milk yield (kg)</td>
<td valign="middle" align="left">12,909</td>
<td valign="middle" align="left">7,405</td>
</tr>
<tr>
<td valign="middle" align="left">Somatic cell <break/>count-First lactation</td>
<td valign="middle" align="left">Mean somatic cell count in cells/mL (&#xd7;1,000)</td>
<td valign="middle" align="left">12,909</td>
<td valign="middle" align="left">102.3</td>
</tr>
<tr>
<td valign="middle" align="left">Somatic cell <break/>count-Second and higher lactations</td>
<td valign="middle" align="left">Mean somatic cell count in cells/mL (&#xd7;1,000)</td>
<td valign="top" align="left">12,909</td>
<td valign="top" align="left">188.2</td>
</tr>
<tr>
<td valign="middle" align="left">Calving-to-first-service interval</td>
<td valign="middle" align="left">Mean days from calving to first insemination</td>
<td valign="middle" align="left">12,841</td>
<td valign="middle" align="left">75.8</td>
</tr>
<tr>
<td valign="middle" align="left">Calving interval</td>
<td valign="middle" align="left">Mean days between the previous and current calving</td>
<td valign="middle" align="left">12,906</td>
<td valign="middle" align="left">387.4</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s2_3">
<title>Statistical analyses</title>
<p>All analyses are based on the herd reports from 2017, and are, therefore, taken from herd mean information and not individual cow data. The analyses were carried out across breeds. The main dairy cattle breed in Austria is Fleckvieh (74.7%), followed by Holstein (7.4%) and Brown Swiss (5.6%) (<xref ref-type="bibr" rid="B22">RZA Annual Report, 2022</xref>). A separate analysis for each breed was not possible as many herds have more than one breed or crossbred cows and the herd means for milk yield, somatic cell count, interval from calving to first insemination and calving interval are routinely calculated for each herd across all animals (without taking the breed into account).</p>
<p>All statistics were calculated using SAS software (SAS Institute Inc.). The farms were assigned to one of the following 6 groups according to the proportion of cows in the herd with a moderate or high risk of ketosis (KetoMIR risk class 2 or 3): &#x2264;10, &gt;10-&#x2264;20, &gt;20-&#x2264;30, &gt;30-&#x2264;40, &gt;40-&#x2264;50, &gt;50%. The Kruskal-Wallis nonparametric test was used to determine whether there were significant differences between the groups (<xref ref-type="bibr" rid="B17">Kruskal and Wallis, 1952</xref>). For multiple comparison, the Dwass, Steel, Critchlow-Fligner multiple comparison procedure was applied if the p-value was lower than 0.05 for the global null hypothesis (<xref ref-type="bibr" rid="B7">Critchlow and Fligner, 1991</xref>).</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<title>Results</title>
<p>In our study, the mean incidence of cows with a moderate or high ketosis risk based on KetoMIR was 14% at the herd level (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref>). Highly elevated incidences of &gt;30% were found in 8.6% of farms (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Number of herds in each ketosis risk class (% of cows in the herd with a moderate or high ketosis risk).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fanim-05-1367210-g001.tif"/>
</fig>
<p>The Kruskal-Wallis test determined that there are significant differences in all investigated variables between farms at different risk of ketosis. The subsequently-applied Dwass, Steel, Critchlow-Fligner multiple comparison procedure showed that the farms with the lowest ketosis risk (&#x2264;10% of cows in the herd with a moderate or high ketosis risk) differ in all variables from the farms with the highest ketosis risk (&gt;50% of cows in the herd with a moderate or high ketosis risk) (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>). The increased ketosis risk based on KetoMIR was associated with lower average herd milk yield (-1,975 kg milk). Mean herd somatic cell count in first and higher lactations was increased by 60,500 and 134,400 cells/ml, respectively. The interval from calving to first service was prolonged by +36.5 days, as was the calving interval with +58.2 days.</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Herd mean values, median, 25<sup>th</sup> percentile and 75<sup>th</sup> percentile for milk yield, somatic cell count, calving-to-first-service-interval and calving interval with respect to ketosis risk (% of cows in the herd with a moderate or high ketosis risk according to KetoMIR result).</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="middle" align="left">% of cows in the herd with a moderate or high risk of ketosis</th>
<th valign="middle" align="left">Trait</th>
<th valign="middle" align="left">Herd mean</th>
<th valign="middle" align="left">25<sup>th</sup> percentile</th>
<th valign="middle" align="left">Median</th>
<th valign="middle" align="left">75<sup>th</sup> percentile</th>
<th valign="middle" align="left">Significance<sup>1</sup>
</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">&#x2264;10<break/>&gt;10-&#x2264;20<break/>&gt;20-&#x2264;30<break/>&gt;30-&#x2264;40<break/>&gt;40-&#x2264;50<break/>&gt;50</td>
<td valign="middle" align="left">Milk yield, kg</td>
<td valign="middle" align="left">7,765<break/>7,379<break/>6,937<break/>6,549<break/>6,133<break/>5,790</td>
<td valign="middle" align="left">6,836<break/>6,380<break/>5,975<break/>5,561<break/>5,348<break/>4,829</td>
<td valign="middle" align="left">7,718<break/>7,305<break/>6,820<break/>6,490<break/>6,078<break/>5,863</td>
<td valign="middle" align="left">8,651<break/>8,270<break/>7,799<break/>7,514<break/>6,922<break/>6,750</td>
<td valign="middle" align="left">a<break/>b<break/>c<break/>d<break/>e<break/>e</td>
</tr>
<tr>
<td valign="top" align="left">&#x2264;10<break/>&gt;10-&#x2264;20<break/>&gt;20-&#x2264;30<break/>&gt;30-&#x2264;40<break/>&gt;40-&#x2264;50<break/>&gt;50</td>
<td valign="middle" align="left">Somatic cell count-First lactation, cells/mL (&#xd7;1,000)</td>
<td valign="middle" align="left">92.5<break/>104.5<break/>114.3<break/>121.8<break/>125.8<break/>153.0</td>
<td valign="middle" align="left">49.9<break/>54.6<break/>58.4<break/>58.7<break/>59.5<break/>69.2</td>
<td valign="middle" align="left">74.5<break/>81.6<break/>88.8<break/>92.2<break/>102.9<break/>100.6</td>
<td valign="middle" align="left">114.7<break/>126.2<break/>141.8<break/>143.2<break/>163.3<break/>190.8</td>
<td valign="middle" align="left">a<break/>b<break/>c<break/>c<break/>cd<break/>d</td>
</tr>
<tr>
<td valign="top" align="left">&#x2264;10<break/>&gt;10-&#x2264;20<break/>&gt;20-&#x2264;30<break/>&gt;30-&#x2264;40<break/>&gt;40-&#x2264;50<break/>&gt;50</td>
<td valign="middle" align="left">Somatic cell count-Second and higher lactations, cells/mL (&#xd7;1,000)</td>
<td valign="middle" align="left">160.6<break/>197.5<break/>218.5<break/>235.7<break/>258.2<break/>295.0</td>
<td valign="middle" align="left">97.2<break/>121.6<break/>134.7<break/>144.1<break/>147.9<break/>177.0</td>
<td valign="middle" align="left">143.6<break/>174.1<break/>193.6<break/>209.0<break/>223.4<break/>257.7</td>
<td valign="middle" align="left">203.2<break/>247.6<break/>275.2<break/>285.1<break/>327.5<break/>357.9</td>
<td valign="middle" align="left">a<break/>b<break/>c<break/>cd<break/>de<break/>e</td>
</tr>
<tr>
<td valign="top" align="left">&#x2264;10<break/>&gt;10-&#x2264;20<break/>&gt;20-&#x2264;30<break/>&gt;30-&#x2264;40<break/>&gt;40-&#x2264;50<break/>&gt;50</td>
<td valign="middle" align="left">Calving-to-first-service interval, days</td>
<td valign="middle" align="left">71.7<break/>75.0<break/>81.8<break/>87.9<break/>89.5<break/>108.2</td>
<td valign="middle" align="left">59.8<break/>61.9<break/>64.9<break/>66.9<break/>70.7<break/>76.5</td>
<td valign="middle" align="left">67.9<break/>70.8<break/>76.2<break/>81.5<break/>82.8<break/>93.6</td>
<td valign="middle" align="left">78.7<break/>82.8<break/>91.6<break/>98.1<break/>102.0<break/>125.9</td>
<td valign="middle" align="left">a<break/>b<break/>c<break/>d<break/>d<break/>e</td>
</tr>
<tr>
<td valign="top" align="left">&#x2264;10<break/>&gt;10-&#x2264;20<break/>&gt;20-&#x2264;30<break/>&gt;30-&#x2264;40<break/>&gt;40-&#x2264;50<break/>&gt;50</td>
<td valign="middle" align="left">Calving interval, days</td>
<td valign="middle" align="left">388.9<break/>397.5<break/>408.4<break/>418.6<break/>425.6<break/>447.1</td>
<td valign="middle" align="left">371.0<break/>376.0<break/>382.0<break/>389.0<break/>391.0<break/>404.0</td>
<td valign="middle" align="left">383.0<break/>391.0<break/>401.0<break/>409.0<break/>416.0<break/>433.0</td>
<td valign="middle" align="left">400.0<break/>411.0<break/>424.0<break/>438.0<break/>448.5<break/>476.0</td>
<td valign="middle" align="left">a<break/>b<break/>c<break/>d<break/>d<break/>e</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>
<sup>1</sup>Values lacking common superscript letters are significantly different (P &lt; 0.05) determined by the Dwass, Steel, Critchlow-Fligner multiple comparison procedure.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s4" sec-type="discussion">
<title>Discussion</title>
<p>The reported incidence of ketosis based on KetoMIR in Austria is at the lower end of the range published in the literature for dairy cattle. A study in 10 European countries indicated that the overall prevalence of ketosis, defined as serum &#x3b2;-hydroxybutyrate concentration &#x2265; 1,200 to 1,400 &#xb5;mol/L in cows within 2 to 15 days in milk was 21.8%, ranging from 11.2 to 36.6% (<xref ref-type="bibr" rid="B24">Suthar et&#xa0;al., 2013</xref>). <xref ref-type="bibr" rid="B3">Berge and Vertenten (2014)</xref> reported that 39% of the cows in western European dairy herds were classified as having ketosis, defined as a milk based keto test result &#x2265; 100 &#x3bc;mol/L. The herd average of ketosis was 43% in Germany, 53% in France, 31% in Italy, 46% in the Netherlands, and 31% in the United Kingdom. Of the 131 investigated farms, 112 (85%) had 25% or more of their fresh cows resulting as positive for ketosis. <xref ref-type="bibr" rid="B4">Brunner et&#xa0;al. (2019)</xref> reported prevalence of subclinical ketosis (&#x3b2;-hydroxybutyrate concentration &#x2265;1.2 mmol/L) in dairy cows in Central and South America, Africa, Asia, Australia, New Zealand, and Eastern Europe. Across all investigated countries, the prevalence of subclinical ketosis was 24.1%, ranging from 8.3% up to 40.1%.</p>
<p>In our study, a higher incidence of cows at moderate or high risk of ketosis on the farm was associated with lower milk yield, higher somatic cell count, longer time from calving to first service and prolonged calving interval, which is in agreement with previous studies. A negative association between the herd prevalence of ketosis and milk yield was also recently reported by <xref ref-type="bibr" rid="B6">Couto Serrenho et&#xa0;al. (2023)</xref>. As mentioned by <xref ref-type="bibr" rid="B8">Daros et&#xa0;al. (2022)</xref> it is likely that herds that produce more milk also have better general management and thus may have implemented more effective ketosis prevention protocols.</p>
<p>In agreement with our results, <xref ref-type="bibr" rid="B26">van Straten et&#xa0;al. (2009)</xref> reported that cows with ketosis were 44% more likely to have an event with a somatic cell count &gt;250,000 cells/ml than cows without ketosis. In addition, it was found that cows with extreme relative body weight loss in early lactation were more likely to have an increased somatic cell count throughout lactation.</p>
<p>An undesirable relationship of ketosis and fertility was reported by numerous authors (<xref ref-type="bibr" rid="B20">Reist et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B27">Walsh et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B21">Rutherford et&#xa0;al., 2016</xref>). <xref ref-type="bibr" rid="B5">Compton et&#xa0;al. (2015)</xref> found that concentration of &#x3b2;-hydroxybutyrate in blood &#x2265; 1.2 mmol/L at any stage within 5 weeks post-calving was associated with decreased 6-week pregnancy rate (78 vs. 85%). Recently, <xref ref-type="bibr" rid="B1">Alemu et&#xa0;al. (2023)</xref> reported a negative association between elevated milk &#x3b2;-hydroxybutyrate within 42 d and reproductive performance after the voluntary waiting period.</p>
</sec>
<sec id="s5" sec-type="conclusion">
<title>Conclusion</title>
<p>Milk is the most promising matrix to identify cows with ketosis, because it is easy to sample and allows a complete screening of the herd. Based on routinely available clinical ketosis diagnoses and MIR-predicted traits, a new ketosis risk indicator (KetoMIR) was developed to provide a new screening tool of the herd at milk recording. The ketosis risk was modeled for the first 120 days of lactation. Overall, an increased incidence of cows with a moderate or high ketosis risk on the farm indicates a problem and was associated with lower milk production, increased somatic cell count, longer time from calving to first service and prolonged calving interval. The use of milk MIR-predicted traits for herd-level ketosis screening could be an important factor in preventing ketosis to limit as much as possible the economic losses caused by this disease.</p>
</sec>
<sec id="s6" sec-type="data-availability">
<title>Data availability statement</title>
<p>The data used in the current study are not publicly available due to privacy restrictions of the data provider and owner (LKV Austria). Requests to access these datasets should be directed to F-JA <email xlink:href="mailto:Franz-Josef.Auer@lkv-austria.at">Franz-Josef.Auer@lkv-austria.at</email>.</p>
</sec>
<sec id="s7" sec-type="ethics-statement">
<title>Ethics statement</title>
<p>This study was an observational study of farms in their normal routines, and no interventions were conducted on any animals or humans for the purpose of this article. It thus did not require Institutional Animal Care and Use Committee or Institutional Review Board approval.</p>
</sec>
<sec id="s8" sec-type="author-contributions">
<title>Author contributions</title>
<p>AK: Conceptualization, Formal analysis, Methodology, Visualization, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. LD: Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. AW: Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. MM: Writing &#x2013; original draft, Writing &#x2013; review &amp; editing, Data curation. F-JA: Writing &#x2013; original draft, Writing &#x2013; review &amp; editing. CE-D: Conceptualization, Funding acquisition, Project administration, Supervision, Writing &#x2013; original draft, Writing &#x2013; review &amp; editing.</p>
</sec>
</body>
<back>
<sec id="s9" sec-type="funding-information">
<title>Funding</title>
<p>The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This work was conducted within the COMET-Project D4Dairy (Digitalization, Data integration, Detection and Decision support in Dairying, Project number: 872039). D4Dairy was supported by Federal Ministry for Climate Action, Environment, Energy, Mobility, Innovation and Technology (BMK), Federal Ministry for Digital and Economic Affairs (BMDW) and the provinces of Lower Austria and Vienna in the framework of COMET-Competence Centers of Excellent Technologies. The COMET program is handled by the Austrian Research Promotion Agency (FFG).</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>The authors would like to thank LKV Austria for providing access to various farm data.</p>
</ack>
<sec id="s10" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>Authors AK, MM, and CE-D were employed by the company ZuchtData EDV-Dienstleistungen GmbH, LD and AW by Regional State Association for Performance and Quality Inspection in Animal Breeding of Baden W&#xfc;rttemberg and F-JA by LKV-Austria.</p>
</sec>
<sec id="s11" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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