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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Aging Neurosci.</journal-id>
<journal-title>Frontiers in Aging Neuroscience</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Aging Neurosci.</abbrev-journal-title>
<issn pub-type="epub">1663-4365</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fnagi.2021.743573</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Neuroscience</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>MicroRNAs as Potential Orchestrators of Alzheimer&#x00027;s Disease-Related Pathologies: Insights on Current Status and Future Possibilities</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Abuelezz</surname> <given-names>Nermeen Z.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1418349/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Nasr</surname> <given-names>Fayza Eid</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1478211/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>AbdulKader</surname> <given-names>Mohammad Ahmed</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/275217/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Bassiouny</surname> <given-names>Ahmad R.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Zaky</surname> <given-names>Amira</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/56203/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Biochemistry Department, College of Pharmaceutical Sciences and Drug Manufacturing, Misr University for Science and Technology</institution>, <addr-line>Giza</addr-line>, <country>Egypt</country></aff>
<aff id="aff2"><sup>2</sup><institution>Department of Biochemistry, Faculty of Science, Alexandria University</institution>, <addr-line>Alexandria</addr-line>, <country>Egypt</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Wael M. Y. Mohamed, International Islamic University Malaysia, Malaysia</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Subodh Kumar, Texas Tech University Health Sciences Center, United States; Marta Rusek, Medical University of Lublin, Poland</p></fn>
<corresp id="c001">&#x0002A;Correspondence: Amira Zaky <email>amzakyha&#x00040;alexu.edu.eg</email></corresp>
</author-notes>
<pub-date pub-type="epub">
<day>12</day>
<month>10</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>13</volume>
<elocation-id>743573</elocation-id>
<history>
<date date-type="received">
<day>18</day>
<month>07</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>13</day>
<month>09</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2021 Abuelezz, Nasr, AbdulKader, Bassiouny and Zaky.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Abuelezz, Nasr, AbdulKader, Bassiouny and Zaky</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license> </permissions>
<abstract><p>Alzheimer&#x00027;s disease (AD) is a progressive and deleterious neurodegenerative disease, strongly affecting the cognitive functions and memory of seniors worldwide. Around 58% of the affected patients live in low and middle-income countries, with estimates of increasing deaths caused by AD in the coming decade. AD is a multifactor pathology. Mitochondrial function declines in AD brain and is currently emerging as a hallmark of this disease. It has been considered as one of the intracellular processes severely compromised in AD. Many mitochondrial parameters decline already during aging; mitochondrial efficiency for energy production, reactive oxygen species (ROS) metabolism and the <italic>de novo</italic> synthesis of pyrimidines, to reach an extensive functional failure, concomitant with the onset of neurodegenerative conditions. Besides its impact on cognitive functions, AD is characterized by loss of synapses, extracellular amyloid plaques composed of the amyloid-&#x003B2; peptide (A&#x003B2;), and intracellular aggregates of hyperphosphorylated Tau protein, accompanied by drastic sleep disorders, sensory function alterations and pain sensitization. Unfortunately, till date, effective management of AD-related disorders and early, non-invasive AD diagnostic markers are yet to be found. MicroRNAs (miRNAs) are small non-coding nucleic acids that regulate key signaling pathway(s) in various disease conditions. About 70% of experimentally detectable miRNAs are expressed in the brain where they regulate neurite outgrowth, dendritic spine morphology, and synaptic plasticity. Increasing studies suggest that miRNAs are intimately involved in synaptic function and specific signals during memory formation. This has been the pivotal key for considering miRNAs crucial molecules to be studied in AD. MicroRNAs dysfunctions are increasingly acknowledged as a pivotal contributor in AD via deregulating genes involved in AD pathogenesis. Moreover, miRNAs have been proved to control pain sensitization processes and regulate circadian clock system that affects the sleep process. Interestingly, the differential expression of miRNA panels implies their emerging potential as diagnostic AD biomarkers. In this review, we will present an updated analysis of miRNAs role in regulating signaling processes that are involved in AD-related pathologies. We will discuss the current challenges against wider use of miRNAs and the future promising capabilities of miRNAs as diagnostic and therapeutic means for better management of AD.</p></abstract>
<kwd-group>
<kwd>Alzheimer&#x00027;s</kwd>
<kwd>mitochondria</kwd>
<kwd>microRNAs</kwd>
<kwd>synaptic plasticity</kwd>
<kwd>sleep disorder</kwd>
<kwd>pain</kwd>
</kwd-group>
<contract-sponsor id="cn001">Science and Technology Development Fund<named-content content-type="fundref-id">10.13039/501100003009</named-content></contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="6"/>
<equation-count count="0"/>
<ref-count count="274"/>
<page-count count="26"/>
<word-count count="21499"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<sec>
<title>Alzheimer&#x00027;s: A Peculiar Case of Brain Disease</title>
<p>&#x0201C;Alois Alzheimer,&#x0201D; The German Bavarian psychiatrist, and neurologist was the first to report Alzheimer&#x00027;s disease (AD) in 1906 as &#x0201C;A peculiar severe disease of the cerebral cortex&#x0201D; (Hippius and Neund&#x000F6;rfer, <xref ref-type="bibr" rid="B88">2003</xref>). Today, Alzheimer&#x00027;s is acknowledged as a common neurodegenerative disease affecting elderly population. It is the most common form of dementia and may account to 60&#x02013;70% of cases (Plassman et al., <xref ref-type="bibr" rid="B174">2007</xref>), with increasing numbers of people getting AD every year, especially in middle and low-income countries (Alzheimer&#x00027;s Disease Facts and Figures, <xref ref-type="bibr" rid="B1">2020</xref>).</p>
<p>AD is an irreversible, progressive brain disorder and the most common cause of dementia among older people. It is heterogeneous in every aspect, such as the relation between the presence of plaques and tangles of A&#x003B2; and Tau in the brain, clinical symptoms, and genetic background that causes memory loss, language problems, and impulsive or unpredictable behavior. Tau tangles block the transport of nutrients and other essential molecules inside neurons. Recently, it was found that Tau signal emerges first in the rhinal cortex independently of A&#x003B2;. Tau pathology begins focally but expands catastrophically under the influence of A&#x003B2; pathology to mediate neurodegeneration and cognitive decline. Subsequent Tau elevation in the temporal neocortex is associated with age, A&#x003B2;, and APOE status (Sanchez et al., <xref ref-type="bibr" rid="B193">2021</xref>). This indicates a loss of connection between the nerve cells, or neurons, in the brain. At the earlier stages of AD, patient&#x00027;s daily routine is impacted due to disruptions in the entorhinal cortex and hippocampus that affects memory, executive cognition, and visuospatial awareness. Meanwhile, during later AD stages, personality, behavior, and language impairments arise due to escalating damage in frontal, temporal, and parietal lobes. Such drastic damages are associated with continuous decline in independence, culminating in patients&#x00027; complete dependence on their caregivers by the latest stages of the disease. Consequently, AD is one of the most debilitating disorders as it impacts both patients and families on mental, psychological, and socio-economic aspects.</p>
</sec>
<sec>
<title>Alzheimer&#x00027;s: What We Know So Far</title>
<p>Scientists do not yet fully understand the exact causes of AD. AD is a multifactorial disorder in which genetic and environmental risk factors interact to increase the rate of normal aging. It is so tightly associated with old age that there was a speculation it is a normal part of aging (Masters et al., <xref ref-type="bibr" rid="B148">2015</xref>). Various causes probably contribute to AD etiology including a combination of age-related changes in the brain; brain proteins fail to function normally and the presence of toxic oligomeric species of Amyloid peptides (A&#x003B2;) and Tau within the AD brain. Recent data confirms the view that such species can propagate and spread within neural circuits, disrupting the work of brain cells (neurons) and triggering a series of toxic events (Chen and Mobley, <xref ref-type="bibr" rid="B34">2019</xref>). Also, mitochondrial dysfunction, a compromised blood brain barrier, immune system dysfunction, and infectious agents probably contribute to the etiology of AD (Fulop et al., <xref ref-type="bibr" rid="B61">2021</xref>). AD is a progressive neurologic disorder that causes the brain to shrink (atrophy) and brain cells to die, culminating into continuous decline in thinking, behavioral and social skills that affect a person&#x00027;s ability to function independently. Clinical manifestations, which are insidious in onset, include memory loss and cognitive decline (Scheltens et al., <xref ref-type="bibr" rid="B198">2016</xref>). The most accepted theory is that AD is caused by misfolded proteins and the culprit in this misfolding is A&#x003B2; peptides, that aggregate or clump, killing brain cells and giving rise to the symptoms of memory loss and reduced cognition.</p>
<p>Current research identifies three stages of AD: preclinical Alzheimer&#x00027;s disease, mild cognitive impairment (MCI) due to Alzheimer&#x00027;s disease, and dementia due to Alzheimer&#x00027;s disease (Sperling et al., <xref ref-type="bibr" rid="B214">2011</xref>). In the last two stages, symptoms are present, but to varying degrees. Early signs include difficulty remembering recent events or conversations. As the disease progresses, memory impairments worsen, and other symptoms develop.</p>
<p>People with MCI due to Alzheimer&#x00027;s disease have biomarker evidence of an Alzheimer&#x00027;s-related brain change (for example, elevated levels of A&#x003B2;) and greater cognitive decline than expected for their age, but this decline does not significantly interfere with everyday activities (Roberts and Knopman, <xref ref-type="bibr" rid="B186">2013</xref>). In MCI, changes in thinking abilities may be noticeable to family members and friends but may not be noticeable to others.</p>
<p>Sadly till date, there is no cure for AD. Currently, the only approved drugs for AD merely alleviate some of the symptoms -partially and temporarily- but do not stop the disease from progressing.</p>
</sec>
<sec>
<title>Alzheimer&#x00027;s Hallmarks: A&#x003B2; and Phosphorylated Tau</title>
<p>The neuropathology of AD is characterized by an abnormal build-up of extracellular amyloid-&#x003B2; (A&#x003B2;) peptide as neuritic plaques, pathological extracellular aggregates formed around a core of A&#x003B2; and are a hallmark of AD (Stratmann et al., <xref ref-type="bibr" rid="B215">2016</xref>), accompanied by intracellular hyperphosphorylated (p)-Tau fibrils which accumulate as neurofibrillary tangles (NFTs) within neurons (Stratmann et al., <xref ref-type="bibr" rid="B215">2016</xref>). Amyloid peptide (A&#x003B2;) is derived from the amyloid precursor protein (APP), &#x003B1;-secretase (&#x0201C;normal&#x0201D; cleavage), or &#x003B2;-secretase (&#x0201C;abnormal&#x0201D; cleavage) cleaves APP, and a second cleavage of the &#x003B2;-secretase product, by &#x003B3;-secretase, cleaves APP further to produce A&#x003B2; (Scheuner et al., <xref ref-type="bibr" rid="B199">1996</xref>; Di Carlo et al., <xref ref-type="bibr" rid="B46">2012</xref>). Depending on the cleavage site by &#x003B3;-secretase, A&#x003B2;40 or A&#x003B2;42 are produced. A&#x003B2;40 is the most common form, while the 42-amino-acid&#x02013;long fragment, A&#x003B2;42, is less abundant and more associated with AD. The proportion of A&#x003B2;40 to A&#x003B2;42 is important in AD because A&#x003B2;42 is far more prone to oligomerize and form fibrils than A&#x003B2;40 peptide (Sun et al., <xref ref-type="bibr" rid="B218">2015</xref>). Recently, Alexandra Grubman&#x00027;s group isolated amyloid plaque-containing (using labeling with methoxy-XO4, XO4<sup>&#x0002B;</sup>) and non-containing (XO4<sup>&#x02212;</sup>) microglia from an AD mouse model. Transcriptomics analysis identified different transcriptional trajectories in aging and AD mice. Where XO4<sup>&#x0002B;</sup> microglial transcriptomes demonstrated dysregulated expression of genes associated with late onset AD (Grubman et al., <xref ref-type="bibr" rid="B72">2021</xref>). Recent genome-wide association studies have established that the majority of AD risk loci are found in or near genes that are highly and sometimes uniquely expressed in microglia, the resident macrophages of the central nervous system. This leads to the concept of microglia being critically involved in the early steps of the disease and identified them as important potential therapeutic targets. Changes in microglial morphology, the resident macrophages of the central nervous system, and signaling is also evident in AD brains, contributing to the pathology (Hemonnot et al., <xref ref-type="bibr" rid="B85">2019</xref>).</p>
<p>The neuropathological changes of AD brain, based on brain imaging studies, show slow and progressive cerebral atrophy, where the frontal and temporal cortices often have enlarged sulcal spaces with atrophy of the gyri, while primary motor and somatosensory cortices most often appear unaffected (Perl, <xref ref-type="bibr" rid="B172">2010</xref>). Neuropathological studies in combination of MRI approaches also showed early pathological alterations to the locus coeruleus (LC), a tiny nucleus in the brainstem and the principal site of noradrenaline synthesis. The LC undergoes significant neuronal loss in AD, with postmortem studies showing as much as 80% reduction in cell number in people with AD compared to age-matched controls associated with tauopathy in AD (German et al., <xref ref-type="bibr" rid="B67">1992</xref>; Hoogendijk et al., <xref ref-type="bibr" rid="B90">1995</xref>; Beardmore et al., <xref ref-type="bibr" rid="B15">2021</xref>). Another macroscopic feature commonly observed in AD is the loss of neuromelanin pigmentation in the locus coeruleus with age and is proposed to be toxic and inflammatory when released into the extracellular environment (Serrano-Pozo et al., <xref ref-type="bibr" rid="B200">2011</xref>).</p>
<p>Another characteristic feature in AD pathology is the neurofibrillary tangles of hyperphosphorylated microtubule-associated protein (Tau). Microtubules (MTs) are hollow cylinders composed of parallel protofilaments of &#x003B1; and &#x003B2; tubulin subunits. Tau is a neuronal microtubule associated protein whose main biological functions are to promote microtubule self-assembly by tubulin and to stabilize those already formed. MTs dynamics are regulated by Tau proteins that stabilize or destabilize them (van der Vaart et al., <xref ref-type="bibr" rid="B231">2009</xref>) and protect MTs against depolymerization by decreasing the dissociation of tubulin at both MT ends, resulting in an increased growth rate and decreased catastrophe frequency (Trinczek et al., <xref ref-type="bibr" rid="B230">1995</xref>). Disruption of microtubules, as are observed in patients with AD, interrupts axonal transport which prevents vesicles and organelles from reaching the synapses. These result in the slow and steady deterioration of the synapses and retrograde degeneration of the neurons.</p>
</sec>
<sec>
<title>Genes of AD</title>
<p>Multiple studies reported different genes to be involved in AD development. Although twin studies support the existence of a genetic component in late onset Alzheimer&#x00027;s disease (LOAD), no one particular causative gene has been identified yet. Familial AD is mainly associated with mutations in the A&#x003B2; precursor protein (APP) gene and presenilin genes <italic>PSEN1</italic> and <italic>PSEN2</italic> that are responsible for &#x003B3;-secretase cleavage of APP. Still, Familial AD comprises only the minor subclass of AD. Apolipoprotein E (APOE) on chromosome 19 is another polymorphic protein and the allele APOE4 is the strongest genetic risk factor for Sporadic AD (Giri et al., <xref ref-type="bibr" rid="B68">2016</xref>). As the strong affinity of APOE for A&#x003B2; affects its production, hydrolysis, and elimination (Reitz and Mayeux, <xref ref-type="bibr" rid="B184">2014</xref>). Yet, although around 80% of LOAD is associated with APOE, apolipoprotein E (APOE)-4 allele confers only a 20% risk for developing the disease. Similarly, increasing evidence confirms that Sporadic AD has a more underlying complex etiology that includes both genetic and environmental factors (Bekris et al., <xref ref-type="bibr" rid="B16">2010</xref>).</p>
<p>The most successful approach to identifying the genetic architecture of AD is the genome-wide association studies (GWAS) which identified and confirmed 19 genome-wide-significant common variant signals in addition to APOE. Together with GWAS, Whole Exome Sequencing (WES), and Whole Genome Sequencing (WGS) defined no fewer than 20 additional genes whose variants contribute to increased risk of AD (Jun et al., <xref ref-type="bibr" rid="B103">2017</xref>; Liu et al., <xref ref-type="bibr" rid="B134">2017</xref>). Kunkle et al. (<xref ref-type="bibr" rid="B117">2019</xref>), confirmed 20 previous LOAD risk loci and identified five new genome-wide loci (<italic>IQCK, ACE, ADAM10, ADAMTS1, and WWOX</italic>), two of which (<italic>ADAM10 and ACE</italic>) were identified in a recent genome-wide association (GWAS)-by-familial-proxy of AD or dementia. Fine-mapping of the human leukocyte antigen (HLA) region confirms the neurological and immune-mediated disease haplotype HLA-DR15 as a risk factor for LOAD (Kunkle et al., <xref ref-type="bibr" rid="B117">2019</xref>). Other implicated genes are Clusterin <italic>(CLU)</italic>, Sortilin-related receptor-1 <italic>(SORL1)</italic>, ATP-binding cassette subfamily A member 7 <italic>(ABCA7)</italic>, Bridging integrator 1 <italic>(BIN1)</italic>, phosphatidylinositol binding clathrin assembly protein <italic>(PICALM)</italic>, CD2 associated protein <italic>(CD2AP)</italic>, Complement component (3b/4b) receptor 1 <italic>(CR1)</italic>, CD33, triggering receptor expressed on myeloid cells 2 <italic>(TREM2)</italic>, and phospholipase D3 <italic>(PLD3)</italic> (Karch and Goate, <xref ref-type="bibr" rid="B105">2015</xref>). These variants define possible contributions in AD from genes that regulate endocytosis, inflammation and the brain&#x00027;s innate immune system, and cholesterol/sterol metabolism (Karch and Goate, <xref ref-type="bibr" rid="B105">2015</xref>).</p>
</sec>
<sec>
<title>Alzheimer&#x00027;s Pathophysiology: Multiple Hypotheses</title>
<p>The complexity of AD led to the generation of multiple hypotheses, in trials to unravel AD pathogenesis. Illustration of the different hypotheses of AD development and progression is shown in <xref ref-type="fig" rid="F1">Figure 1</xref>.</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>Illustration of the different hypotheses of Alzheimer&#x00027;s Disease (AD) Development and Progression: Amyloid hypothesis: as disturbed secretase enzymes increase production of A&#x003B2;42 eventually forming A&#x003B2; plaques that impact synaptic functionality, and neuronal dysfunction. Tau Hypothesis: Where increased production of hyperphosphorylated tau provokes disintegration of microtubules and accumulation of hyperphosphorylated tau fibrils causing neuronal death. Cholinergic hypothesis: where disturbed Acetylcholine (ACH) impacts synaptic function. Inflammation hypothesis: where increased release of inflammatory modulators provoke exaggerated immune response that disrupts synaptic functions and plasticity. Mitochondrial hypothesis: where disrupted mitochondrial functions causes glucose hypometabolism, poor ATP production and increased production of ROS, eventually causing synaptic dysfunction. (Created with <ext-link ext-link-type="uri" xlink:href="https://BioRender.com">BioRender.com</ext-link>).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fnagi-13-743573-g0001.tif"/>
</fig>
</sec>
<sec>
<title>A&#x003B2; Cascade Hypothesis</title>
<p>For long, A&#x003B2; has been seen as the main causative agent in AD pathology that is followed by neurofibrillary tangles, vascular damage and neuronal loss as direct consequences of A&#x003B2; deposition (Murphy and LeVine, <xref ref-type="bibr" rid="B156">2010</xref>). Where A&#x003B2; deposits in the hippocampus and basal segment, provoking A&#x003B2; to form insoluble aggregates, and inducing mitochondrial damage (Lustbader et al., <xref ref-type="bibr" rid="B141">2004</xref>), and synaptic dysfunction (Hunt and Castillo, <xref ref-type="bibr" rid="B96">2012</xref>). This cascade of events is followed by microglia and astrocytes activation, which arise inflammation and oxidative stress, causing synaptic loss and neuronal death (Fan et al., <xref ref-type="bibr" rid="B55">2020</xref>). Recent studies show that elevated levels of A&#x003B2; plaque do not always correlate with magnified AD pathology. Whereas, increasing evidence reveals that A&#x003B2; oligomers (A&#x003B2; Prions) might be more neurotoxic as they are easily transmitted and released in the synapses (Mucke and Selkoe, <xref ref-type="bibr" rid="B153">2012</xref>; Amin and Harris, <xref ref-type="bibr" rid="B8">2021</xref>). Consequently, and considering the accumulated body of AD research, the majority of data still supports A&#x003B2; role as the principal initiator of AD complicated pathology in the early stages. Yet obviously, A&#x003B2; is not the only contributor to AD late stages.</p>
</sec>
<sec>
<title>Tau Hyperphosphorylation Hypothesis</title>
<p>Tau is mainly found in neuronal axons of the brain. It maintains microtubule structure, synaptic structure, function (Kimura et al., <xref ref-type="bibr" rid="B108">2014</xref>) and regulates neuronal signaling. Tau is also a phosphoprotein that depends on protein kinase and protein phosphatase activities. Hyperphosphorylated Tau in AD patients&#x00027; brains causes configuration changes and loss of tubulin polymerization capacity (Grundke-Iqbal et al., <xref ref-type="bibr" rid="B73">1986</xref>) that result in defective microtubule functioning. Moreover, increased levels of cytosolic Tau induce polymerization of phosphorylated Tau to form NFTs (Iqbal et al., <xref ref-type="bibr" rid="B98">2010</xref>), that contribute to reduced synapses numbers, and cell dysfunction (Callahan et al., <xref ref-type="bibr" rid="B27">1999</xref>). Tau hyperphosphorylation is positively correlated with the pathological severity of AD and is apparently more detrimental to cognitive impairment than A&#x003B2; (Mocanu et al., <xref ref-type="bibr" rid="B152">2008</xref>).</p>
</sec>
<sec>
<title>Cholinergic Hypothesis</title>
<p>The cholinergic hypothesis suggests that disruptions of acetylcholine-containing neurons contribute to the cognitive decline in Alzheimer&#x00027;s disease (AD). This hypothesis is supported by the fact that severity of dementia in AD, is positively correlated with the extent of cholinergic loss (Francis et al., <xref ref-type="bibr" rid="B60">1985</xref>). Furthermore, multiple reports imply that cholinergic loss may be an early sign of cognitive decline in AD, and can therefore have a more crucial role in A&#x003B2; depositions, Tau phosphorylation, and neuroplasticity (Terry and Buccafusco, <xref ref-type="bibr" rid="B226">2003</xref>; Hampel et al., <xref ref-type="bibr" rid="B81">2018</xref>). Currently, inhibitors of acetylcholinesterase are widely used in AD management, and they show some tangible results concerning symptomatic improvement in AD patients.</p>
</sec>
<sec>
<title>Inflammation Hypothesis</title>
<p>Neuroinflammation is a hallmark of AD and increasing evidence shows that microglia is a central player in AD. As in early AD stage, microglia, <italic>TREM2</italic> and complement system are responsible for synaptic disruptions (Paolicelli et al., <xref ref-type="bibr" rid="B168">2011</xref>; Hong et al., <xref ref-type="bibr" rid="B89">2016</xref>). Meanwhile, as the disease progresses, reactive microglia and astrocytes surround amyloid plaques and secrete numerous pro-inflammatory cytokines that drastically impact synaptic functions and neuroplasticity over the course of AD (Du et al., <xref ref-type="bibr" rid="B49">2018</xref>).</p>
</sec>
<sec>
<title>Oxidative Stress Hypothesis</title>
<p>Likewise, oxidative stress is a significant player in AD pathogenesis. Normally, the brain utilizes more oxygen than other tissues and undergoes mitochondrial respiration, which increases the potential for ROS exposure. AD is highly associated with cellular oxidative stress that contributes to increased protein oxidation, glycol oxidation, lipid peroxidation and A&#x003B2; accumulation. In line, advanced glycation end products (AGE) and malondialdehyde have been detected in the neuro tangles and senile plaques of AD (Markesbery, <xref ref-type="bibr" rid="B146">1997</xref>). Moreover, multiple studies show that A&#x003B2; is capable of generating free radicals that mediate neuron degeneration and death (Cheignon et al., <xref ref-type="bibr" rid="B31">2017</xref>).</p>
</sec>
<sec>
<title>Mitochondrial Damage and Glucose Hypometabolism Hypothesis</title>
<p>Increasing body of evidence implies that mitochondrial impairments play fundamental roles in AD pathology. Healthy mitochondria support neuronal activity, provide proper energy supply to neurons by regulating glucose metabolism, and minimizing oxidative damage. In the neurons, mitochondria are vital for biosynthesis of iron and heme. They are also involved in presynaptic transmission, and they regulate calcium concentration during signal transduction (Picone et al., <xref ref-type="bibr" rid="B173">2014</xref>).</p>
<p>Emerging reports spot glucose hypometabolism as an early pathogenic event in preclinical stages of AD concurrently with cognitive and functional decline. Using fluoro-2-deoxyglucose positron-emission tomography (FDG-PET), reveal that glucose hypometabolism is consistently detected in hippocampus and cortex of AD brain compared to normal individuals. In line, impaired mitochondrial bioenergetics, increased oxidative stress and disrupted mitochondrial genome are consistent features of mitochondrial abnormalities in AD and are interconnected to amplify the debilitating pathologies of AD (Wang W. et al., <xref ref-type="bibr" rid="B241">2020</xref>).</p>
<p>Till date, it is not totally clear whether any of these characteristic deficits is the primary initiator or just a contributor in the contemporary multifactorial AD pathology. A challenge confirmed by the little therapeutic success achieved against AD so far. Consequently, we obviously need new approaches for AD diagnosis at its earliest stages before neuronal damage becomes irreversibly established. It is also crucial to concurrently target multiple axes in AD pathologies for more tangible therapeutic feasibility.</p>
</sec>
<sec>
<title>MicroRNAs: Origin, Maturation, and Role</title>
<p>MicroRNAs production excels with formation of a long primary transcript (pri-miRNA) via RNA polymerase II. Inside the nucleus, pri-miRNAs are cleaved by Drosha protein and DiGeorge Syndrome Critical region 8 (DGCR8) protein which dimerize together to form a functional microprocessor complex. These dimerized proteins cleave pri-miRNAs into precursor miRNAs (pre-miRNA), which are then transported to the cytoplasm and digested by Dicer and TAR RNA binding proteins (TRBP) to release a double-stranded miRNA duplex. Helicase enzyme unwinds the duplex to form mature miRNA strands. One of these strands is usually degenerated, while the other associates with Ago2 protein to form miRNA-induced Silencing Complex (miRISC). Each mature miRNA contains a sequence of 7 or 8 nucleotides that binds to its complementary region(s) on target mRNAs. Mature miRNAs bind to the 5&#x02032;- or 3&#x02032;-untranslated regions (UTR) of target mRNAs and rarely, both strands can serve as mature functional miRNA. Generally, functional miRNAs induce gene silencing using two different mechanisms, depending on the complementarity between the miRNA and its mRNA target (Amakiri et al., <xref ref-type="bibr" rid="B7">2019</xref>; Kou et al., <xref ref-type="bibr" rid="B110">2020</xref>). If mature miRNA binds perfectly to the complementary regions of the target mRNA, it induces mRNA degradation via de-adenylation, cap removal, and exonucleolytic digestion of mRNA. Meanwhile, if miRNA binds with imperfect complementarity to target mRNA, it causes a translation block by repression of translation during the initial phase or the elongation phase. Alternatively, miRNAs can repress translation by inducing premature ribosome detachment (Silvestro et al., <xref ref-type="bibr" rid="B207">2019</xref>). One functional miRNA can interact with hundreds of target mRNAs to exert various levels of regulatory effects, and a single mRNA can be targeted by several miRNAs as well.</p>
<p>Around 70% of miRNAs are found in the human brain, where miRNAs are responsible for regulating synaptic functions, neurotransmitter release, and neuronal development. In the last few years, the significance of balanced miRNAs expression proved to be crucial for proper functionality and homeostasis in the body. The differential expression of miRNAs and/or single nucleotide polymorphism (SNP) of miRNAs are implicated in multiple diseases (Reddy et al., <xref ref-type="bibr" rid="B182">2017</xref>). Likewise, the dysregulation of miRNAs emerged as a key contributor in AD pathology, as it leads to altered protein expressions and impairment of the complicated signaling network balance in the brain. The next section will cover the main updated findings concerning miRNAs role in AD pathogenesis and its progressive events.</p>
</sec>
</sec>
<sec id="s2">
<title>Micrornas and AD Cognitive Impairment</title>
<p>Cognition refers to the brain&#x00027;s ability to think, learn, remember, and process information. The loss of neuronal connections in AD brain is basically attributed to disrupted signaling pathways that affect both synaptic plasticity and dendritic functions, the two crucial controllers of cognitive processes. On the molecular level, updated studies show that A&#x003B2; and Tau pathologies cause progressive axonal degeneration and drastic downstream impairments in the synaptic processes (Pereira et al., <xref ref-type="bibr" rid="B171">2021</xref>). Moreover, A&#x003B2; and Tau aggregates induce exacerbated immune microglial response, as well as disrupted astrocytes functionality, that eventually contribute to cognitive decline in AD (Fakhoury, <xref ref-type="bibr" rid="B54">2018</xref>). Over the past few years, miRNAs have emerged as significant regulators of A&#x003B2; and Tau metabolism, glial functionality, and synaptic plasticity. Simultaneously, increasing studies report the drastic impact of miRNA dysregulations on cognitive functions in AD, through targeting key genes and activity-mediated protein synthesis at the synaptic level. Comprehensive illustration of the modulatory role of miRNAs in AD-related cognitive impairment is presented in <xref ref-type="fig" rid="F2">Figure 2</xref>.</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Comprehensive illustration of the modulatory role of miRNAs in cognitive impairment in AD through affecting A&#x003B2; and Tau metabolism, mitochondrial functionality, neuroinflammation or synaptic plasticity. (Created with <ext-link ext-link-type="uri" xlink:href="https://BioRender.com">BioRender.com</ext-link>).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fnagi-13-743573-g0002.tif"/>
</fig>
<sec>
<title>MicroRNAs and A&#x003B2; Pathway Disruptions</title>
<p>Although amyloid deposition alone is not able to produce full AD-pathology, studies that used A&#x003B2; PET in cognitively normal elderly individuals, mild cognitive impairment (MCI) and AD patients found significant relationships between cognitive deficits and increased brain fibrillar A&#x003B2; (Wang F. et al., <xref ref-type="bibr" rid="B237">2015</xref>). MicroRNAs are closely related to the synaptic dysfunction induced by abnormal A&#x003B2; metabolism. Increasing body of work shows that cognitive impairment caused by A&#x003B2; can be restored by manipulation of miRNAs, which strongly supports the belief that disrupted miRNA expressions are critical in cognitive impairment in AD patients (Weldon Furr et al., <xref ref-type="bibr" rid="B248">2019</xref>). MicroRNA dysregulations are repeatedly reported in association with key genes that regulate A&#x003B2; synthesis, cleavage, and clearance. <xref ref-type="table" rid="T1">Table 1</xref> illustrates an updated comprehensive summary of the human studies showing differentially expressed miRNAs in AD samples and their relation to A&#x003B2; pathway regulations.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Disturbed miRNAs reported in human AD studies and their relation to A&#x003B2; pathways.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>miRNA</bold></th>
<th valign="top" align="left"><bold>Sample</bold></th>
<th valign="top" align="left"><bold>Regulation</bold></th>
<th valign="top" align="left"><bold>Relevant pathway</bold></th>
<th valign="top" align="left"><bold>References</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">miR-15a<break/> miR-15 b</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Downregulation</td>
<td valign="top" align="left">Downregulates<break/> BACE1 expression</td>
<td valign="top" align="left">Satoh et al., <xref ref-type="bibr" rid="B197">2015</xref>; Lang et al., <xref ref-type="bibr" rid="B118">2016</xref>; Li and Wang, <xref ref-type="bibr" rid="B126">2018</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-29a</td>
<td valign="top" align="left">Brain<break/> CSF<break/> Serum</td>
<td valign="top" align="left">Down<break/> Up<break/> Down</td>
<td valign="top" align="left">BACE1</td>
<td valign="top" align="left">H&#x000E9;bert et al., <xref ref-type="bibr" rid="B84">2008</xref>; Geekiyanage et al., <xref ref-type="bibr" rid="B66">2012</xref>; M&#x000FC;ller et al., <xref ref-type="bibr" rid="B154">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-29b</td>
<td valign="top" align="left">Blood</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">BACE1</td>
<td valign="top" align="left">Satoh et al., <xref ref-type="bibr" rid="B197">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-29c</td>
<td valign="top" align="left">Brain</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">BACE1</td>
<td valign="top" align="left">Lei et al., <xref ref-type="bibr" rid="B122">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-20b</td>
<td valign="top" align="left">Brain</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Nunez-Iglesias et al., <xref ref-type="bibr" rid="B163">2010</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-21-5p</td>
<td valign="top" align="left">Brain</td>
<td valign="top" align="left">Up</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Giuliani et al., <xref ref-type="bibr" rid="B70">2021</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-16</td>
<td valign="top" align="left">CSF</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">M&#x000FC;ller et al., <xref ref-type="bibr" rid="B155">2014</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-9</td>
<td valign="top" align="left">Brain</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">H&#x000E9;bert et al., <xref ref-type="bibr" rid="B84">2008</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-30c</td>
<td valign="top" align="left">Brain</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Cogswell et al., <xref ref-type="bibr" rid="B38">2008</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-101a-3p</td>
<td valign="top" align="left">Brain</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">H&#x000E9;bert et al., <xref ref-type="bibr" rid="B84">2008</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-188</td>
<td valign="top" align="left">Brain, Serum</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Kou et al., <xref ref-type="bibr" rid="B110">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-106a</td>
<td valign="top" align="left">Brain<break/> Serum</td>
<td valign="top" align="left">Down<break/> Up</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Wang et al., <xref ref-type="bibr" rid="B242">2011</xref>; Cheng et al., <xref ref-type="bibr" rid="B36">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-106b</td>
<td valign="top" align="left">Brain<break/> Whole blood</td>
<td valign="top" align="left">Down<break/> Up</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">H&#x000E9;bert et al., <xref ref-type="bibr" rid="B84">2008</xref>; Cheng et al., <xref ref-type="bibr" rid="B36">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-138-5p</td>
<td valign="top" align="left">Plasma Exosomes</td>
<td valign="top" align="left">Up</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Lugli et al., <xref ref-type="bibr" rid="B140">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-138</td>
<td valign="top" align="left">Brain, CSF</td>
<td valign="top" align="left">Variant</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Boscher et al., <xref ref-type="bibr" rid="B25">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-135b</td>
<td valign="top" align="left">Blood</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">BACE1</td>
<td valign="top" align="left">Zhang et al., <xref ref-type="bibr" rid="B268">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-124</td>
<td valign="top" align="left">CSF</td>
<td valign="top" align="left">Down</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Burgos et al., <xref ref-type="bibr" rid="B26">2014</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-155</td>
<td valign="top" align="left">Peripheral Blood mononuclear cells</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">Inhibits A&#x003B2; catabolism</td>
<td valign="top" align="left">Guedes et al., <xref ref-type="bibr" rid="B77">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-34</td>
<td valign="top" align="left">Peripheral Blood mononuclear cells</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">A&#x003B2; clearance</td>
<td valign="top" align="left">Basavaraju and de Lencastre, <xref ref-type="bibr" rid="B14">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-181b</td>
<td valign="top" align="left">Peripheral Blood mononuclear cells</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">A&#x003B2; clearance</td>
<td valign="top" align="left">Kumar and Reddy, <xref ref-type="bibr" rid="B111">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-181c</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Downregulated</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Geekiyanage et al., <xref ref-type="bibr" rid="B66">2012</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-186</td>
<td valign="top" align="left">Brain</td>
<td valign="top" align="left">Downregulated</td>
<td valign="top" align="left">BACE1</td>
<td valign="top" align="left">Ben Halima et al., <xref ref-type="bibr" rid="B17">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-346</td>
<td valign="top" align="left">Human Neuron Enriched culture</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Long et al., <xref ref-type="bibr" rid="B137">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-338</td>
<td valign="top" align="left">Hippocampus</td>
<td valign="top" align="left">Downregulated</td>
<td valign="top" align="left">APP</td>
<td valign="top" align="left">Qian et al., <xref ref-type="bibr" rid="B178">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-200</td>
<td valign="top" align="left">Brain</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">SIRT1, A&#x003B2; accumulation, Apoptosis</td>
<td valign="top" align="left">Zhang et al., <xref ref-type="bibr" rid="B266">2017</xref></td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Regarding A&#x003B2; metabolism, several miRNAs including miR-9, miR-29, miR-135, and miR-186 are significant regulators of Beta-Secretase 1 (<italic>BACE1)</italic> enzyme levels which is central in A&#x003B2; generation (Wang et al., <xref ref-type="bibr" rid="B239">2019</xref>).</p>
<p>MiR-200-3p particularly has been grabbing increased attention for its role in A&#x003B2; pathology in AD. MiR-200-3p is repressed in AD animal and cell models. Mechanistically, miR-200-3p modulates translocation of BACE1 enzyme and ribosomal protein S6 kinase B1 (S6K1), hence it suppresses cell apoptosis, decreases A&#x003B2;1-42 and Tau phosphorylation in cell experiments (Samadian et al., <xref ref-type="bibr" rid="B192">2021</xref>). To evaluate the effect of miRNA-200b/c <italic>in vivo</italic>, Tg2576 mice were treated with miRNA-200b/c by intracerebroventricular injection. This experiment confirmed that upregulating miR-200 reduced secretion of A&#x003B2;. Moreover, the treated mice were relieved of memory impairments induced by intracerebroventricular injection of oligomeric A&#x003B2;. They also demonstrated proper spatial learning, suggesting that miRNA-200b and miRNA-200c are potential therapeutic targets in AD (Higaki et al., <xref ref-type="bibr" rid="B87">2018</xref>). These data are strongly supported by clinical studies that showed decreased miR-200b in serum and cerebrospinal fluid of AD patients, compared to healthy subjects (Silvestro et al., <xref ref-type="bibr" rid="B207">2019</xref>).</p>
<p>Recent studies have recently shown that miR-137 and miR-15 b can reverse the neurotoxicity induced by A&#x003B2; abnormal metabolism in animal and cell lines (He et al., <xref ref-type="bibr" rid="B83">2017</xref>; Li and Wang, <xref ref-type="bibr" rid="B126">2018</xref>). In the updated pilot study of Vergallo et al. (<xref ref-type="bibr" rid="B236">2021</xref>), the protective anti-A&#x003B2; effect of miR-15b is reported in asymptomatic at-risk population for AD, as there were significant associations between plasma concentrations of miR-15b, with core neuroimaging biomarkers of AD pathophysiology in the hippocampus (Vergallo et al., <xref ref-type="bibr" rid="B236">2021</xref>).</p>
<p>Several miRNAs as miR-98 and miR-124 modulate A&#x003B2; production via notch signaling pathway. Specifically, miR-98 suppresses Amyloid accumulation as it inhibits <italic>HEY2</italic> protein levels which inactivates the notch signaling pathway responsible for A&#x003B2; production (Amakiri et al., <xref ref-type="bibr" rid="B7">2019</xref>).</p>
<p>Furthermore, miRNAs that directly target <italic>APP</italic>, confirm the role of miRNAs in AD pathogenesis. Downregulated levels of miR-101 are reported in AD brain and are consistent with <italic>in vitro</italic> studies where inhibition of miR-101 increased APP levels (Siedlecki-Wullich et al., <xref ref-type="bibr" rid="B205">2021</xref>). <italic>In vitro</italic> and <italic>in vivo</italic> studies also show that downregulation of miR-137 determines an increase in Ca2<sup>&#x0002B;</sup> levels and a reduction of A&#x003B2;1-40 and A&#x003B2;1-42. These results indicate that an increase in miR-137 could cause a decrease in Ca2<sup>&#x0002B;</sup> levels in neurons, improving neuronal dysfunctions of AD (Davare and Hell, <xref ref-type="bibr" rid="B42">2003</xref>).</p>
<p>Another approach of AD A&#x003B2; pathology is the A&#x003B2; clearance from the brain to the circulation. A&#x003B2; clearance from the brain requires adequate balance of A&#x003B2; phagocytosis, glymphatic clearance and healthy system of ABC transporters <italic>ABCB1</italic> and <italic>ABCG2</italic>. Recently, miR-34a and miR-29b have been found to interfere with at least three pathways of A&#x003B2; clearance (Weldon Furr et al., <xref ref-type="bibr" rid="B248">2019</xref>). In adult mammalian brain, miR-34a and miR-29b are highly expressed and have been implicated in a range of neurodevelopmental and neuropathological processes. Both miR-34a and miR-29b are dysregulated in brain and serum samples of AD patients (Madadi et al., <xref ref-type="bibr" rid="B144">2019</xref>).</p>
<p>Taken together, these cumulative studies show that AD disease can disrupt miRNA coordinated expression. Simultaneously, miRNA altered expression contributes to Progressive AD pathogenesis through disrupting key genes in A&#x003B2; pathway. Unleashing the mechanism of microRNA A&#x003B2; regulating pathways, can identify novel therapeutic targets for better AD management.</p>
</sec>
<sec>
<title>MicroRNAs and Tau Pathology in AD</title>
<p>In the last few years, abnormal phosphorylated Tau has proved to be detrimental in cognitive decline (Di et al., <xref ref-type="bibr" rid="B47">2016</xref>). Moreover, extracellular soluble Tau oligomers have been recognized as a possible cause of memory loss and synaptic dysfunction (Biundo et al., <xref ref-type="bibr" rid="B22">2018</xref>). Experimental AD studies helped to identify several miRNAs that are linked to Taupathy in AD. Among the most prominent miRNAs, miR-125b, and miR-138 are upregulated in AD and have been shown to induce Tau hyper phosphorylation and tangling in neuronal cultures. Subsequently their upregulation disrupts associative learning and cognition in AD mice models (Banzhaf-Strathmann et al., <xref ref-type="bibr" rid="B12">2014</xref>; Wang X. et al., <xref ref-type="bibr" rid="B243">2015</xref>). MiR-125 upregulation in AD promotes Tau hyperphosphorylation through activating Mitogen-activated protein kinase (<italic>MAPK)</italic> kinases, most likely by down-regulating its target phosphatases genes: <italic>DUSP6</italic> and <italic>PPP1CA</italic>. Whereas, direct hippocampal delivery of miR-125b mimic improved learning, memory and inhibited Tau phosphorylation and expression of DUSP6, and PPP1CA in C57BL/6 mice (Banzhaf-Strathmann et al., <xref ref-type="bibr" rid="B12">2014</xref>). Other miRNAs are reported to modulate Tau affinity for microtubule, regulate the maintenance of microtubule network, and affect Tau aggregation/deposition in NFTs (Siedlecki-Wullich et al., <xref ref-type="bibr" rid="B205">2021</xref>). MiR-22-3p affects Tau phosphorylation through regulating Sirtuin 1 <italic>SIRT1</italic> gene. Meanwhile, miR132-3p regulates Tau phosphorylation via <italic>PTBP2</italic> gene and Tau splicing via modulating <italic>MeCP2</italic> and <italic>PTEN</italic> genes (Pratic&#x000F2;, <xref ref-type="bibr" rid="B176">2020</xref>). In 3xTg mice, loss of miR-132 increased total and phosphorylated Tau levels and provoked Tau aggregation. Consistently, restoring miR-132 to normal levels improved Tau pathology and long-term memory (Smith et al., <xref ref-type="bibr" rid="B209">2015</xref>). Similarly, miR146a-5p is reported to regulate Tau phosphorylation via <italic>ROCK1</italic> gene.</p>
<p>Clinically and in support of these translational experiments, miR-125, miR-138, miR-146 and miR- 132 are significantly dysregulated in the cerebrospinal fluid of AD patients (Galimberti et al., <xref ref-type="bibr" rid="B63">2014</xref>; Lee et al., <xref ref-type="bibr" rid="B119">2016</xref>; Wei et al., <xref ref-type="bibr" rid="B245">2020</xref>). MiR-369 is one of the most recently studied miRNAs. Knocking out miR-369 in 3xTg AD mice aggravated cognitive impairment and promoted hyperphosphorylation of Tau, through upregulating kinases <italic>Fyn</italic> and serine/threonine-protein kinase 2 <italic>(SRPK2)</italic> as the upstream molecules. Meanwhile, Restoring miR-369 reversed the hyperphosphorylation of Tau and downregulated <italic>Fyn</italic> and <italic>SRPK2</italic>, implying the possible therapeutic potential of miR-369 in AD (Yao et al., <xref ref-type="bibr" rid="B261">2020</xref>).</p>
<p>Similarly, miR-483-5p is recently reported to regulate <italic>ERK1</italic> and <italic>ERK2</italic> kinases at both mRNA and protein levels, resulting in reduced phosphorylation of Tau protein associated with Tau neurofibrillary pathology in AD. Taking these observations together, suggests the neuroprotective action of miR-483-5p in AD pathology (Nagaraj et al., <xref ref-type="bibr" rid="B160">2021</xref>).</p>
<p>Besides Tau phosphorylation, miRNAs have a key role in Tau clearance. Where some post-translational modifications of Tau inhibit Tau ubiquitin binding which promote Tau aggregation. Moreover, acetylation at specific sites of Tau provokes autophosphorylation, and aggregation. This acetylation process is dependent on the balance between acetyltransferase p300 (an acetylase) and sirtuin 1 (SIRT1, a deacetylase). Recent studies demonstrated that <italic>SIRT1</italic> gene could be directly inhibited by miR-9, miR-212, and miR-181c to imply their potential role in Tau regulation and consequent AD events (Zhao et al., <xref ref-type="bibr" rid="B269">2017</xref>; Pratic&#x000F2;, <xref ref-type="bibr" rid="B176">2020</xref>).</p>
</sec>
<sec>
<title>MicroRNAs and Synaptic Plasticity in AD</title>
<p>Dendrites and dendritic spines are the loci of long-term synaptic plasticity that facilitates cognitive processes such as learning and memory. On the cellular level, synaptic plasticity is mediated by structural changes and functionality of dendritic spines. The dendritic spines have specialized subdomains that contain scaffolding proteins, signal transduction molecules, ion channels, and cytoskeleton components which collectively regulate spine morphology, synaptic transmission, and plasticity. Assembly and remodeling of neuronal circuit are generally affected by alterations in density and properties of ionic channels and proteins of the dendritic spines (Bosch and Hayashi, <xref ref-type="bibr" rid="B24">2012</xref>; Reza-Zaldivar et al., <xref ref-type="bibr" rid="B185">2020</xref>).</p>
<p>Growing evidence confirms that alterations of spine morphology and dendritic spine (DS) loss are correlated with AD cognitive decline even before neuronal loss (Dorostkar et al., <xref ref-type="bibr" rid="B48">2015</xref>). Furthermore, the characteristic A&#x003B2; and Tau pathologies in AD, suppress synaptic plasticity, which simultaneously provokes changes in dendritic morphology, synaptic maturation and synaptic loss (Pereira et al., <xref ref-type="bibr" rid="B171">2021</xref>). Moreover, updated postmortem examination of AD brains shows that cognitive impairment correlates with synaptic loss better than the number of extracellular plaques or NFTs in AD, making synaptic failure a hallmark of AD (Kumar and Reddy, <xref ref-type="bibr" rid="B114">2020</xref>).</p>
<p>Interestingly, microRNAs are now established as principal regulators of synaptic plasticity during neuronal circuit formation and integration. Moreover, changes in neuronal microRNA expression contribute to synaptic function modification via modulating dendritic spine morphology and/ or regulating local protein translation to synaptic transmission. These mechanisms are proved determinant for both synapse formation and synaptic plasticity (Reza-Zaldivar et al., <xref ref-type="bibr" rid="B185">2020</xref>). <xref ref-type="fig" rid="F3">Figure 3</xref> spots the prominent regulatory role of miRNAs in synaptic plasticity.</p>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>Comprehensive illustration of the regulatory role of prominent miRNAs in synaptic plasticity in AD. MicroRNAs regulate vesicle formation and trafficking, ACH release and neurotransmission, post synaptic transcription processes and dendrites morphology. (Created with <ext-link ext-link-type="uri" xlink:href="https://BioRender.com">BioRender.com</ext-link>).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fnagi-13-743573-g0003.tif"/>
</fig>
<p>Multiple studies reported miRNAs that contribute to impaired synaptic plasticity in AD. <xref ref-type="table" rid="T2">Table 2</xref> illustrates an updated summary of the miRNAs involved in regulating target genes of synaptic functions, morphology and dendritic spine alterations in AD studies. Among the interesting miRNAs, miR-34a overexpression is found to impact synaptic functionality and cognitive decline in AD mice models (Sarkar et al., <xref ref-type="bibr" rid="B195">2019</xref>). On the molecular level, miR-34a targets <italic>SIRT1, CREB</italic> and <italic>BDNF</italic> genes that have multiple roles in AD progression via increasing Tau Phosphorylation, altering spine morphology and spine functions. Loss of miR-101 in hippocampal neurons was found to cause cognitive decline and modulation of AD-related genes in mice. Where miR-101 knockdown in the hippocampus of C57BL/6 J mice showed AMPK hyperphosphorylation, upregulation of miR-101 target genes associated with AD such as <italic>APP</italic>, and <italic>Rab5</italic> and overproduction of A&#x003B2;42 levels (Barbato et al., <xref ref-type="bibr" rid="B13">2020</xref>).</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>MicroRNAs involved in modulating key target genes of synaptic plasticity in AD.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>miRNA</bold></th>
<th valign="top" align="left"><bold>Target gene</bold></th>
<th valign="top" align="left"><bold>Function</bold></th>
<th valign="top" align="left"><bold>References</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">miR-34a</td>
<td valign="top" align="left"><italic>GRIN2B</italic><break/> <italic>Syt-1</italic><break/> <italic>Stx-1A</italic></td>
<td valign="top" align="left">Synaptic transmission reduced dendritic trees and alteration of DS morphology and function</td>
<td valign="top" align="left">Agostini et al., <xref ref-type="bibr" rid="B3">2011</xref>; Xu et al., <xref ref-type="bibr" rid="B256">2018</xref>;<break/> Sarkar et al., <xref ref-type="bibr" rid="B195">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-210</td>
<td valign="top" align="left"><italic>NPTX1 AMPAR</italic></td>
<td valign="top" align="left">Recruitment/clustering, synaptic transmission</td>
<td valign="top" align="left">Pulkkinen et al., <xref ref-type="bibr" rid="B177">2008</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-125b</td>
<td valign="top" align="left"><italic>GRIN2A</italic><break/> <italic>EPHA4</italic></td>
<td valign="top" align="left">Synaptic transmissionFormation of long and narrow DS filopodia-like, with a subsequently synaptic transmission weakening</td>
<td valign="top" align="left">Alsharafi et al., <xref ref-type="bibr" rid="B6">2016</xref><break/> Edbauer et al., <xref ref-type="bibr" rid="B51">2010</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-181a</td>
<td valign="top" align="left"><italic>GRIA2</italic></td>
<td valign="top" align="left">Synaptic transmission</td>
<td valign="top" align="left">Rodriguez-Ortiz et al., <xref ref-type="bibr" rid="B188">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miRNA-574</td>
<td valign="top" align="left"><italic>Nrn1</italic></td>
<td valign="top" align="left">DS stabilization leading to cognitive impairment</td>
<td valign="top" align="left">Li F. et al., <xref ref-type="bibr" rid="B125">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miRNA-29a/b</td>
<td valign="top" align="left"><italic>Arpc3</italic></td>
<td valign="top" align="left">Reducing the mushroom-shaped DS formation, and DS head enlargement, a fundamental step in synaptic maturation</td>
<td valign="top" align="left">Lippi et al., <xref ref-type="bibr" rid="B133">2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">miRNA-135</td>
<td valign="top" align="left"><italic>CPLX1 CPLX2</italic></td>
<td valign="top" align="left">Impairment of the postsynaptic exocytosis of AMPA receptors leading to DS shrinkage</td>
<td valign="top" align="left">Hu et al., <xref ref-type="bibr" rid="B93">2014</xref></td>
</tr>
<tr>
<td valign="top" align="left">miRNA-124</td>
<td valign="top" align="left"><italic>CREB</italic></td>
<td valign="top" align="left">Serotonin-induced long-term synaptic plasticity</td>
<td valign="top" align="left">Rajasethupathy et al., <xref ref-type="bibr" rid="B179">2009</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-128</td>
<td valign="top" align="left"><italic>STIM2</italic></td>
<td valign="top" align="left">Negative modulator of intracellular calcium</td>
<td valign="top" align="left">Deng et al., <xref ref-type="bibr" rid="B44">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-92, miR-137, miR-501</td>
<td valign="top" align="left"><italic>GRIA1</italic></td>
<td valign="top" align="left">Synaptic transmission</td>
<td valign="top" align="left">Letellier et al., <xref ref-type="bibr" rid="B124">2014</xref>; Hu et al., <xref ref-type="bibr" rid="B94">2015</xref>; Olde Loohuis et al., <xref ref-type="bibr" rid="B164">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-9</td>
<td valign="top" align="left"><italic>REST</italic></td>
<td valign="top" align="left">Synaptogenesis, synaptic plasticity, and structuralRemodeling</td>
<td valign="top" align="left">Giusti et al., <xref ref-type="bibr" rid="B71">2014</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-132, miR-134</td>
<td valign="top" align="left"><italic>CREB1</italic><break/> <italic>MMP-9</italic><break/> <italic>BDNF</italic></td>
<td valign="top" align="left">Transcription factors involved in synaptic plasticity<break/> Alterations in DS morphology and maturation</td>
<td valign="top" align="left">Mellios et al., <xref ref-type="bibr" rid="B149">2011</xref>; Jasi&#x00144;ska et al., <xref ref-type="bibr" rid="B100">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miRNA-206</td>
<td valign="top" align="left"><italic>BDNF</italic></td>
<td valign="top" align="left">Decreasing DS density</td>
<td valign="top" align="left">Lee et al., <xref ref-type="bibr" rid="B121">2012</xref></td>
</tr>
<tr>
<td valign="top" align="left">miRNA-218</td>
<td valign="top" align="left"><italic>GRIA2</italic></td>
<td valign="top" align="left">Increasing the amplitude of synaptic currents and formation of thin DS</td>
<td valign="top" align="left">Rocchi et al., <xref ref-type="bibr" rid="B187">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miRNA-30b</td>
<td valign="top" align="left"><italic>EphB2, SIRT1, GRIA2</italic></td>
<td valign="top" align="left">Reduced basal synaptic transmission, impaired spatial learning and memory retention and DS density reduction</td>
<td valign="top" align="left">Song et al., <xref ref-type="bibr" rid="B212">2019</xref></td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Similarly, overexpression of hippocampus miR-30b disrupts basal synaptic transmission, and reduces DS density, eventually leading to declined learning and memory (Song et al., <xref ref-type="bibr" rid="B212">2019</xref>). This is accomplished as miR-30b modifies SIRT1 expression which regulates Tau phosphorylation. Interestingly miR-30b also targets <italic>EphB2</italic> that has a protective role against A&#x003B2; oligomers accumulation and disruption of glutamate receptors that are directly linked to synaptic plasticity and cognitive processes (Ciss&#x000E9; et al., <xref ref-type="bibr" rid="B37">2011</xref>). Another crucial target of miR-30b is the <italic>GRIA2</italic> gene, the predominant excitatory neurotransmitter receptors in mammalian brain (Siedlecki-Wullich et al., <xref ref-type="bibr" rid="B205">2021</xref>), and an increasingly reported linker between A&#x003B2; clearance and synaptic disruptions in AD models (Hettinger et al., <xref ref-type="bibr" rid="B86">2018</xref>).</p>
<p>On the clinical side, miR-138 is highly expressed in the dendrites of hippocampal neurons and it acts to regulate dendritic spine size and structure. Functional screening demonstrates that Acyl Protein Thioesterase1 (APT1)-induced palmitoylation of G protein &#x003B1;13 (<italic>G</italic>&#x003B1;<italic>13</italic>) is important for the regulatory function of miR-138 during dendritic spine development. Whereas, high level of miR-138 significantly reduces APT1 level which leads to dendritic spine shrinkage and concomitant reduction in synaptic transmission (Siegel et al., <xref ref-type="bibr" rid="B206">2009</xref>). Recently a panel of studies focusing on miR-138 function during the process of learning and memory showed a close association with local plasticity-related protein synthesis. Examination of human postmortem brain tissue showed expression of miR-138 and decapping mRNA 1B <italic>(DCP1B)</italic> in hippocampus and frontal cortex. Furthermore, it was found that a human memory-associated single nucleotide polymorphism could interfere with miR-138 binding to the transcripts of DCP1B, implying that miR-138 is a strong modulator of human memory performance (Ye et al., <xref ref-type="bibr" rid="B262">2016</xref>).</p>
<p>Contrarily, some miRNAs have protective effects against synaptic disruptions in AD. For instance, miR-132 inhibits extra synaptic gene Matrix metallopeptidase 9 <italic>(MMP-9)</italic>, whose overexpression promotes formation of immature DS. Consequently, MMP-9 inhibition by miR-132 supports DS head widening that potentiates synaptic plasticity (Jasi&#x00144;ska et al., <xref ref-type="bibr" rid="B100">2016</xref>). In line, a recent study showed that upregulating miR-132 by an enriched environment, enhanced hippocampal synaptic plasticity and prevented DS impairments induced by A&#x003B2; oligomers (Wei et al., <xref ref-type="bibr" rid="B245">2020</xref>). Furthermore, miR-26a and miR-384-5p have been found as significant regulators of dendritic spine growth and targeting endogenous ribosomal S6 kinase 3 (<italic>RSK3</italic>). Inhibition of miR-26a is reported to attenuate neurite outgrowth and neuronal morphogenesis (Gu et al., <xref ref-type="bibr" rid="B74">2015</xref>).</p>
<p>Collectively, these data spot the significant role of miRNAs as key players in synaptic plasticity and the impact of miRNAs dysregulations on synaptic homeostasis and functionality in AD pathology. Getting deeper understanding of miRNAs and their targets concerning synaptic modeling in AD may provide new approach to earlier diagnosis and therapeutic management of AD cognitive pathology.</p>
</sec>
<sec>
<title>MicroRNAs and Glia Cells Role in AD-Cognitive Impairment</title>
<p>Microglia are brain-resident myeloid cells that mediate innate immune responses in the CNS. Under normal conditions, microglia exist in a &#x0201C;resting&#x0201D; state where they &#x0201C;monitor&#x0201D; the surrounding microenvironment and maintain brain homeostasis via synapse organization, removal of debris by phagocytosis and release of neurotrophic factors (Fan and Pang, <xref ref-type="bibr" rid="B56">2017</xref>). Meanwhile, activation of microglia is accompanied by morphological changes that permit motility and phagocytosis. Microglia can differentiate into either M1 (pro-inflammatory) or M2 (anti-inflammatory) phenotypes depending on the provoking signals. M2 microglia release anti-inflammatory and protective cytokines such as IL-10, TGF-&#x003B2;, IL-4, and IL-13, which promote repair (Guedes et al., <xref ref-type="bibr" rid="B75">2013</xref>). Whereas, M1 microglia release inflammatory mediators such as ROS, MMP-9 and pro-inflammatory cytokines such as TNF&#x003B1;, IL-6 and IL-1&#x003B2;.The balance between these different microglial phenotypic states promotes inflammation or tissue repair and influences the progression of neuroinflammatory disorders (Guedes et al., <xref ref-type="bibr" rid="B76">2014</xref>).</p>
<p>Currently, &#x0201C;Microglia&#x0201D; is an increasing hot topic in AD research, and cumulative studies spot the multifaceted role of microglia as beneficial or detrimental in AD. Recent genome-wide association studies confirm that most of AD risk loci are present in or close to genes that are highly and/or uniquely expressed in microglia. This strongly implies the significant involvement of microglia in early steps of AD (Hemonnot et al., <xref ref-type="bibr" rid="B85">2019</xref>). Among the well-known genes are <italic>Cd33</italic> and <italic>TREM2</italic> which are linked to A&#x003B2; phagocytosis and regulation of microglial inflammatory interaction with Tau tangles (Onuska, <xref ref-type="bibr" rid="B165">2020</xref>).</p>
<p>Additionally, the CX3CR1 receptor is predominantly expressed in microglia. Its ligand CX3CL1 is constitutively expressed by neurons, and it helps maintaining microglia in a resting state. CX3CL1-CX3CR1 is a critical signaling pathway that is disrupted in neurodegenerative conditions and is associated with a strong microglial toxicity (Keren-Shaul et al., <xref ref-type="bibr" rid="B107">2017</xref>). The involvement of the CX3CL1/CX3CR1 signaling pathway in AD is confirmed by an elevated plasma concentration of CX3CL1 in AD patients compared to healthy control subjects.</p>
<p>Other interesting contributors are the complement proteins C1q and CR3 (Veerhuis et al., <xref ref-type="bibr" rid="B235">2011</xref>) which are highly produced in the microglia as crucial factors in synapse pruning and are highly present in CSF of AD patients with emerging evidence about their role in A&#x003B2; pathogenesis (Fatoba et al., <xref ref-type="bibr" rid="B58">2021</xref>). Furthermore, Numerous studies demonstrate that microglial A&#x003B2; phagocytosis contributes to degeneration by triggering NLR family pyrin domain containing 3 receptor <italic>(NLRP3)</italic> and lysosomal cathepsin-B that subsequently releases IL-1&#x003B2; and disrupts autophagosome degradation.</p>
<p>Growing body of evidence shows that miRNAs dysregulation impacts microglial hyper-activation, neuroinflammation, and alters macrophage polarization in the brain. Mechanisms that are closely implicated in AD pathology. <xref ref-type="table" rid="T3">Table 3</xref> illustrates updated data about miRNAs that regulate key genes in the microglia.</p>
<table-wrap position="float" id="T3">
<label>Table 3</label>
<caption><p>MicroRNAs and their key target genes in the microglia.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>miRNA</bold></th>
<th valign="top" align="left"><bold>Target Gene</bold></th>
<th valign="top" align="left"><bold>Gene function</bold></th>
<th valign="top" align="left"><bold>References</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">miR-124</td>
<td valign="top" align="left"><italic>C/EBP-&#x003B1;</italic></td>
<td valign="top" align="left">Microglial Polarization to M2</td>
<td valign="top" align="left">Ponomarev et al., <xref ref-type="bibr" rid="B175">2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-155</td>
<td valign="top" align="left"><italic>C-MAf, CCM1, NOX2, NOX4</italic></td>
<td valign="top" align="left">Microglial polarization to M2, microglial activation and increased count</td>
<td valign="top" align="left">Guo et al., <xref ref-type="bibr" rid="B80">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-9</td>
<td valign="top" align="left"><italic>NF-kB</italic></td>
<td valign="top" align="left">Microglial activation</td>
<td valign="top" align="left">Yao et al., <xref ref-type="bibr" rid="B260">2014</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-204</td>
<td valign="top" align="left"><italic>SIRT1</italic></td>
<td valign="top" align="left">Repression of microglial activation</td>
<td valign="top" align="left">Li L. et al., <xref ref-type="bibr" rid="B127">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-125b</td>
<td valign="top" align="left"><italic>NF-kB</italic></td>
<td valign="top" align="left">Contributing in increased TNF-&#x003B1; release</td>
<td valign="top" align="left">Parisi et al., <xref ref-type="bibr" rid="B169">2013</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-34a</td>
<td valign="top" align="left"><italic>TREM2</italic></td>
<td valign="top" align="left">A&#x003B2;42 aggregation and accumulation and microglial activation</td>
<td valign="top" align="left">Alexandrov et al., <xref ref-type="bibr" rid="B5">2013</xref></td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Concerning AD studies, miR-34a is reported as a major target of <italic>TREM2</italic>, a microglial receptor that mediates A&#x003B2;42 clearance via phagocytosis in the CNS. Simultaneously, multiple clinical reports showed miR-34a level is dysregulated in AD patients (Bhattacharjee et al., <xref ref-type="bibr" rid="B20">2016</xref>).</p>
<p>In line, both miR-155 and miR-146a are upregulated in the CNS during AD and both regulate the excessive inflammatory signaling observed in AD disease course (Su et al., <xref ref-type="bibr" rid="B216">2016</xref>). MiR-155 is now established as a crucial pro-inflammatory factor in microglia, as it represses suppressor of cytokine signaling 1 gene (<italic>SOCS-1</italic>). Increased miR-155 expression was recently reported in 3xTg AD mice brains (Guedes et al., <xref ref-type="bibr" rid="B76">2014</xref>), together with enhanced microglial activation. Meanwhile, knockdown of miR-155, induced <italic>SOCS-1</italic> expression and led to downregulation of iNOS and nitric oxide production.</p>
<p>MiR-146 is another multi-faceted miRNA that is implicated in the pathogenesis of AD (Jayadev et al., <xref ref-type="bibr" rid="B101">2013</xref>). In microglia, miR-146 is reported to target Presenilin 2 (<italic>PS2</italic>), a membrane associated protease that regulates proinflammatory microglial behavior (Wang and Wang, <xref ref-type="bibr" rid="B244">2018</xref>).</p>
<p>Astrocytes are another class of glial cells that affect inflammatory response in the CNS. In healthy conditions, astrocytes regulate neuronal metabolism, synaptogenesis, intracellular calcium levels and interact with neuronal signaling (Vasile et al., <xref ref-type="bibr" rid="B233">2017</xref>). Under pathological conditions, astrocytes participate in shaping the CNS response to stress and disease. Where neuroinflammation can be either promoted or restricted by astrocytes through release of pro-inflammatory or anti-inflammatory molecules, leukocyte recruitment and forming functional barriers for CNS parenchyma (Sofroniew, <xref ref-type="bibr" rid="B210">2015</xref>).</p>
<p>In the brain of AD patients, the inflammatory response aggravates astrocytes number, volume and activity (Meraz-Rios et al., <xref ref-type="bibr" rid="B150">2013</xref>). Interestingly, IL-1&#x003B2;, IL-6, and transforming growth factor-&#x003B2; (TGF-&#x003B2;) are upregulated before A&#x003B2; aggregation and Tau hyperphosphorylation. These Inflammatory factors activate astrocytes to over express BACE1 enzyme and produce excessive amounts of A&#x003B2; proteins (Blasko et al., <xref ref-type="bibr" rid="B23">2000</xref>). In turn accumulated A&#x003B2; provokes astrocytes to release more cytokines as TNF-&#x003B1;, a crucial factor in AD-related cognitive impairment (Veeraraghavalu et al., <xref ref-type="bibr" rid="B234">2014</xref>). Additionally, astrocyte dysfunction leads to a decrease in A&#x003B2; uptake and clearance (Rolyan et al., <xref ref-type="bibr" rid="B189">2011</xref>). Moreover, astrocytes have been recently reported to promote Tau lesions and accelerate NFTs formation (Birch et al., <xref ref-type="bibr" rid="B21">2014</xref>; Yang et al., <xref ref-type="bibr" rid="B258">2019</xref>).</p>
<p>Increasing reports spot the disruption of miRNA expression in astrocytes during neuroinflammation and neurodegenerative processes accompanying AD. Among the characteristic miRNAs is miR-146 a. Cui et al. (<xref ref-type="bibr" rid="B40">2010</xref>) found that miR-146a was upregulated in human astrocytes when exposed to A&#x003B2;. The study found that miR-146a mediated down-regulation of interleukin-1 receptor-associated kinase-1 (IRAK-1). IRAK-I is coupled to NF-&#x003BA;B extensive sustained inflammatory response of astrocytes and downstream Toll like receptors proteins. Therefore, NF-&#x003BA;B inhibitors and miR-146a can present a treatment strategy against excessive immune response to A&#x003B2; in the brain (Cui et al., <xref ref-type="bibr" rid="B40">2010</xref>).</p>
<p>Glutamate release, reuptake, and recycling are tightly regulated by astrocytes at tripartite synapses. Glutamate overload can trigger neuronal and synaptic loss (Marttinen et al., <xref ref-type="bibr" rid="B147">2018</xref>). Glial glutamate transporter 1 (GLT-1) contributes to clearance and regulation of glutamate at synaptic clefts. In a 3xTg- AD mouse model, increased levels of miR-181a downregulated synaptic proteins related to GLT-1, impacting the plasticity of glutamatergic synapses in astrocytes, and implying its key mediating role in synapses plasticity (Zumkehr et al., <xref ref-type="bibr" rid="B273">2015</xref>). Generally, miR-181 family regulates neuroinflammatory signaling in astrocytes, and miR-181 family has been reported to be upregulated in AD mouse model, causing impaired synaptic plasticity through targeting <italic>SIRT-1</italic>.</p>
<p>MiR-155 is another significant astrocyte modulator, as it affects astrocytes density during inflammation. Furthermore, increased astrocytes levels of miR-155 were shown to target <italic>SOCS1</italic>, a negative regulator of the inflammatory gene response, in A&#x003B2;-treated astrocytes, causing prolonged expression of inflammatory cytokines (Guedes et al., <xref ref-type="bibr" rid="B76">2014</xref>).</p>
</sec>
<sec>
<title>MicroRNAs and Mitochondrial Damage</title>
<p>A large body of research shows enormous mitochondria alterations in the brains of AD patients. Interestingly, mitochondrial alterations have been consistently observed before the clinical onset of AD (Swerdlow, <xref ref-type="bibr" rid="B219">2018</xref>). As a result, mitochondrial dysfunction is now a hot topic in AD for its possible role in the earlier progression of the disease.</p>
<p>One important feature of mitochondrial alterations in AD is the impaired mitochondrial bioenergetic machinery. Glucose hypometabolism in AD brain is strongly linked to impaired oxidative phosphorylation. Moreover, it is closely correlated to impaired levels of blood thiamine diphosphate (TDP), a crucial coenzyme of pyruvate dehydrogenase and &#x003B1;-ketoglutarate dehydrogenase (KGDHC) enzymes allocated in the Krebs cycle (Sang et al., <xref ref-type="bibr" rid="B194">2018</xref>).</p>
<p>Furthermore, Redox proteomics studies found that many antioxidant enzymes that are allocated in the mitochondria, including glutathione-S-transferase Mu, peroxiredoxin 6, GSH and ATP synthase are oxidized in AD, which might compromise their functions by increasing oxidative stress conditions that prevail in AD affected brain regions (Swomley and Allan Butterfield, <xref ref-type="bibr" rid="B220">2015</xref>). Interestingly, levels of oxidized nucleic acids in mtDNA are reported to be significantly elevated in preclinical AD, again stressing mitochondrial abnormalities as an early event of AD progression (Wang W. et al., <xref ref-type="bibr" rid="B241">2020</xref>). Additionally, emerging studies demonstrated impaired base-excision repair (BER) activity in both AD and MCI patients (Lillenes et al., <xref ref-type="bibr" rid="B131">2016</xref>), suggesting significant contribution of replication error to increased mtDNA mutations in AD.</p>
<p>Only recently, a subset of microRNAs is found to be localized to human mitochondria (mitomiRs) and while mitomiRs functions are still far from being completely explored, recent findings relate mitomiRs to neurodegenerative diseases, including Alzheimer&#x00027;s. MiR-107 is one of the recently discovered mitomirs. It regulates oxidative abilities of mitochondria and downregulated miR-107 was found to decrease mitochondrial volume, cristae and mitochondrial membrane potential. Interestingly, decreased plasma levels of miR-107 correlated with abnormal cortical anatomy, common to AD patients, while injecting miR-107 mimic reversed spatial memory impairment, decreased phosphorylated Tau levels, and A&#x003B2; neurotoxicity (Shu et al., <xref ref-type="bibr" rid="B203">2018</xref>; John et al., <xref ref-type="bibr" rid="B102">2020</xref>).</p>
<p>MitomiR-34a was recently found to affect mitochondrial metabolism contributing to declining spatial memory (Sarkar et al., <xref ref-type="bibr" rid="B196">2016</xref>). In support to the significant potential of mitomiRs in AD, miR-181a is recently reported to affect mitochondrial glucose metabolism and increase mitochondrial dysfunction, while clinically it is upregulated in MCI patients&#x00027; plasma and has been reported as a promising early diagnostic marker to predict progression to AD (Ansari et al., <xref ref-type="bibr" rid="B10">2019</xref>).</p>
<p><xref ref-type="table" rid="T4">Table 4</xref> illustrates updates about the recently discovered mitomiRs and their potential role in AD progression.</p>
<table-wrap position="float" id="T4">
<label>Table 4</label>
<caption><p>Mitochondrial miRNAs in relation to mitochondrial dysfunctions.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>miRNA</bold></th>
<th valign="top" align="left"><bold>Role</bold></th>
<th valign="top" align="left"><bold>Altered level</bold></th>
<th valign="top" align="left"><bold>References</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">miR-34a</td>
<td valign="top" align="left">Allocated in the mitochondria and Promotes apoptosis and dysfunction of mitochondria</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">Sarkar et al., <xref ref-type="bibr" rid="B195">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-107</td>
<td valign="top" align="left">Decreased mitochondrial functions and morphological changes</td>
<td valign="top" align="left">Downregulated</td>
<td valign="top" align="left">Rech et al., <xref ref-type="bibr" rid="B181">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-126</td>
<td valign="top" align="left">Reduces aerobic respiration</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">Tomasetti et al., <xref ref-type="bibr" rid="B229">2014</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR 23a/23b</td>
<td valign="top" align="left">Affects mitochondrial biogenesis</td>
<td valign="top" align="left">Downregulated</td>
<td valign="top" align="left">Tang, <xref ref-type="bibr" rid="B224">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-132</td>
<td valign="top" align="left">Reduces aerobic respiration</td>
<td valign="top" align="left">Downregulated</td>
<td valign="top" align="left">Weinberg et al., <xref ref-type="bibr" rid="B246">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-181a</td>
<td valign="top" align="left">Localized in mitochondria. Promotes apoptosis and dysfunction of mitochondria</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">Giuliani et al., <xref ref-type="bibr" rid="B69">2018</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-762</td>
<td valign="top" align="left">Reduces ATP production</td>
<td valign="top" align="left">Downregulated</td>
<td valign="top" align="left">Yan et al., <xref ref-type="bibr" rid="B257">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-210</td>
<td valign="top" align="left">Clinical marker for MCI and AD<break/> Targets mitochondrial iron sulfur cluster homolog</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">Siedlecki-Wullich et al., <xref ref-type="bibr" rid="B204">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-424</td>
<td valign="top" align="left">Suppression of ATP levels and mitochondrial integrity</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">Duarte et al., <xref ref-type="bibr" rid="B50">2014</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-425</td>
<td valign="top" align="left">Mitochondrial dysfunction and increased ROS production</td>
<td valign="top" align="left">Upregulated</td>
<td valign="top" align="left">Hu Y.-B. et al., <xref ref-type="bibr" rid="B91">2019</xref></td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
</sec>
<sec id="s3">
<title>AD, Sleep Disorders and Circadian Rhythm</title>
<sec>
<title>Sleep: The Complex Process of Circadian Rhythm in Action</title>
<p>Circadian rhythms are 24 h cycles that maintain homeostasis in different body tissues. Circadian rhythm is controlled by the suprachiasmatic nucleus (SCN) which is found in the hypothalamus, and it synchronizes multiple functions as sleep/wake cycle, metabolism, thermoregulation, and hormonal regulation. This molecular clockwork involves genetically encoded autoregulatory feedback loops that provide a 24-h period of circadian oscillation (Park et al., <xref ref-type="bibr" rid="B170">2020</xref>).</p>
<p>The core loop of this molecular clock is driven by a heterodimeric transcriptional activator that is composed of two clock genes: circadian locomotor output cycle kaput <italic>(CLOCK)</italic> and brain&#x02013;muscle&#x02013;arnt-like protein 1 <italic>(BMAL1)</italic>. These heterodimers accelerate E-box-mediated transcription and increase gene expression of negative regulators; [Periods <italic>(PERs: PER1, PER2, and PER3)</italic> and Cryptochromes <italic>(CRYs: CRY1 and CRY2)</italic>] and circadian output genes. Expressed and dimerized <italic>PER: CRY</italic> represses the transcriptional activity of CLOCK:BMAL1, hence, downregulate their own gene transcription. It takes 24 h to complete such loop cycle and the accurate generation of 24 h cycles is regulated by post-translational modifications that includes phosphorylation, ubiquitination, and acetylation. Majorly, the phosphorylation of <italic>PER</italic> proteins by casein kinase I&#x003B5; <italic>(CKI</italic> &#x003B5;<italic>)</italic> and glycogen synthase kinase-3&#x003B2; <italic>(GSK-3</italic> &#x003B2;<italic>)</italic> promotes <italic>PER</italic> nuclear translocation, thereby provide proper completion of the cycle (Eide et al., <xref ref-type="bibr" rid="B52">2005</xref>).</p>
<p>The SCN also contains gamma-aminobutyric acid (GABA) and arginine vasopressin (AVP) neurons that send inhibitory signals to the paraventricular nucleus of the hypothalamus (Reghunandanan and Reghunandanan, <xref ref-type="bibr" rid="B183">2006</xref>). This activates melatonin secretion by the pineal gland and when it binds to MT1 and MT2 receptors, it inhibits the firing of the SCN. Hence, melatonin promotes sleep and resets the circadian pacemaker (Aulinas, <xref ref-type="bibr" rid="B11">2000</xref>).</p>
</sec>
<sec>
<title>AD and Sleep Disturbances</title>
<p>Circadian rhythms that regulate sleep gradually weaken with aging causing disturbances in sleep quality and cognitive alterations. However, circadian rhythms are markedly disturbed in AD all through the disease course. Day-time agitation, night insomnia, restlessness and sun-downing are among the characteristic changes observed in AD and they worsen with AD progression to affect around 42&#x02013;52% of AD patients. Such sleep changes are majorly attributed to disruptions in the precise cascade of circadian rhythm (Todd, <xref ref-type="bibr" rid="B228">2020</xref>).</p>
<p>AD is often associated with changes in the physiological parameters of sleep that include decrease in total sleep time and efficiency, prolonged sleep time stage 1 and stage 2 sleep, lesser time in deeper sleep, increased REM sleep latency and decreased REM sleep, together with decreased density of eye movement activity (Weldemichael and Grossberg, <xref ref-type="bibr" rid="B247">2010</xref>).</p>
<p>Another major disruption of AD-sleep disturbance is the &#x0201C;Sundowning.&#x0201D; This condition refers to a delirium-like status usually occurring at late-afternoon and till dawn. Behavioral components of sundowning can include loud vocalization, wandering, physical aggression, maladaptive physical behaviors, and overall agitation. The prevalence of sundowning in AD ranges from 12 to 25%. The increased frequency for AD agitation at night imply that these chronobiologic changes are affected by disruptions in &#x0201C;the timing&#x0201D; of physiological events (Weldemichael and Grossberg, <xref ref-type="bibr" rid="B247">2010</xref>).</p>
</sec>
<sec>
<title>Causes and Deeper Look to miRNAs Role</title>
<p>The main reason for the sleep-wake disrupted cycle in AD is related to alterations in the suprachiasmatic nucleus (SCN) and melatonin secretion. Moreover, expression of MT1 receptors is decreased in the SCN of AD patients resulting in reduced melatonin production and disappearance of melatonin rhythm (Todd, <xref ref-type="bibr" rid="B228">2020</xref>). Till date, the molecular mechanisms underlying these disturbances are still not fully resolved which leave a tight margin for effective therapeutic intervention. Interestingly, collected data from both human and animal studies show that sleep disturbances are not only a consequence of AD progression, but may also precede AD symptoms onset and may contribute to AD pathology through affecting Tau and A&#x003B2; deposition and clearance from the brain (Musiek et al., <xref ref-type="bibr" rid="B158">2015</xref>). However, despite the high frequency of sleep disturbances during AD course, there is an obvious lack of data that specifically discusses the molecular basis of AD-sleep disorders, apart from other AD-disruptions.</p>
<p>In a recent study, deletion of the master gene BMAL1 abrogated all circadian functions, leading to complete loss of day-night rhythmicity of sleep (Musiek et al., <xref ref-type="bibr" rid="B158">2015</xref>). Simultaneously, sleep deprivation was found to change the expression of clock genes and BMAL1/CLOCK heterodimers binding, thus altering clock function.</p>
<p>Growing evidence now confirm that mature miRNAs are crucial for the fine-tuning of circadian rhythm regulations that also include sleep (<xref ref-type="table" rid="T5">Table 5</xref> enlists some of the miRNAs reported to regulate Circadian Rhythm in different tissues).</p>
<table-wrap position="float" id="T5">
<label>Table 5</label>
<caption><p>MicroRNAs regulating core clock components.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>miRNA</bold></th>
<th valign="top" align="left"><bold>Affected clock component</bold></th>
<th valign="top" align="left"><bold>References</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">miR-449a</td>
<td valign="top" align="left"><italic>PER</italic> gene</td>
<td valign="top" align="left">Hansen et al., <xref ref-type="bibr" rid="B82">2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-103</td>
<td/>
<td valign="top" align="left">Chen et al., <xref ref-type="bibr" rid="B32">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-125a-3p</td>
<td/>
<td valign="top" align="left">Ma et al., <xref ref-type="bibr" rid="B142">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-192</td>
<td/>
<td valign="top" align="left">Garufi et al., <xref ref-type="bibr" rid="B65">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-194</td>
<td/>
<td valign="top" align="left">Nagel et al., <xref ref-type="bibr" rid="B162">2009</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-24</td>
<td/>
<td valign="top" align="left">Oyama et al., <xref ref-type="bibr" rid="B167">2017</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-29a/b/c</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">miR-30a</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">miR-34a</td>
<td/>
<td valign="top" align="left">Ma et al., <xref ref-type="bibr" rid="B142">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-211</td>
<td valign="top" align="left"><italic>Ebox, NPAS2, CLOCK</italic> Genes</td>
<td/>
</tr>
<tr>
<td valign="top" align="left">miR-107</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">miR-124</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">miR-141</td>
<td/>
<td valign="top" align="left">Na et al., <xref ref-type="bibr" rid="B159">2009</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-17-5p</td>
<td/>
<td valign="top" align="left">Gao et al., <xref ref-type="bibr" rid="B64">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-182-5p</td>
<td/>
<td valign="top" align="left">Ma et al., <xref ref-type="bibr" rid="B142">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-19b</td>
<td/>
<td valign="top" align="left">Na et al., <xref ref-type="bibr" rid="B159">2009</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-199b-5p</td>
<td/>
<td valign="top" align="left">Yuan et al., <xref ref-type="bibr" rid="B264">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-206</td>
<td/>
<td valign="top" align="left">Garufi et al., <xref ref-type="bibr" rid="B65">2016</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-10</td>
<td valign="top" align="left">BMAL1 Gene</td>
<td valign="top" align="left">Zheng et al., <xref ref-type="bibr" rid="B270">2021</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-135b</td>
<td/>
<td valign="top" align="left">Zheng et al., <xref ref-type="bibr" rid="B270">2021</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-142-3p</td>
<td/>
<td valign="top" align="left">Tan et al., <xref ref-type="bibr" rid="B223">2012</xref>; Shende et al., <xref ref-type="bibr" rid="B202">2013</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-155</td>
<td/>
<td valign="top" align="left">Shende et al., <xref ref-type="bibr" rid="B201">2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-211</td>
<td/>
<td valign="top" align="left">Ma et al., <xref ref-type="bibr" rid="B142">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-27b-3p</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">miR-494</td>
<td/>
<td valign="top" align="left">Shende et al., <xref ref-type="bibr" rid="B201">2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-106b</td>
<td valign="top" align="left"><italic>CRY</italic> Genes</td>
<td valign="top" align="left">Zheng et al., <xref ref-type="bibr" rid="B271">2018</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-181a,d</td>
<td/>
<td valign="top" align="left">Na et al., <xref ref-type="bibr" rid="B159">2009</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-185</td>
<td/>
<td valign="top" align="left">Lee et al., <xref ref-type="bibr" rid="B120">2013</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-340</td>
<td/>
<td valign="top" align="left">Zheng et al., <xref ref-type="bibr" rid="B271">2018</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-219</td>
<td valign="top" align="left"><italic>ROR</italic> output genes</td>
<td valign="top" align="left">Ma et al., <xref ref-type="bibr" rid="B142">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-142-3p</td>
<td/>
<td valign="top" align="left">Shende et al., <xref ref-type="bibr" rid="B202">2013</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-125a-3p</td>
<td valign="top" align="left"><italic>(CKI &#x003B5;) and (GSK-3 &#x003B2;)</italic></td>
<td valign="top" align="left">Zheng et al., <xref ref-type="bibr" rid="B271">2018</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-181a</td>
<td valign="top" align="left"><italic>ROR&#x003B1; Genes</italic></td>
<td valign="top" align="left">Zheng et al., <xref ref-type="bibr" rid="B271">2018</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-27a-3p</td>
<td/>
<td valign="top" align="left">Zheng et al., <xref ref-type="bibr" rid="B271">2018</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR183-5p</td>
<td/>
<td valign="top" align="left">Dambal et al., <xref ref-type="bibr" rid="B41">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-450-5p</td>
<td/>
<td valign="top" align="left">Zheng et al., <xref ref-type="bibr" rid="B271">2018</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-19b</td>
<td/>
<td valign="top" align="left">Linnstaedt et al., <xref ref-type="bibr" rid="B132">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-503-5p</td>
<td/>
<td valign="top" align="left">Zheng et al., <xref ref-type="bibr" rid="B271">2018</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-126a-3p</td>
<td valign="top" align="left"><italic>E4BP4, DBP Genes</italic></td>
<td valign="top" align="left">Cheng et al., <xref ref-type="bibr" rid="B35">2007</xref></td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Moreover, although differential expression of multiple miRNA panels has been detected in AD, it is of high interest that consensus miRNAs that regulate key genes in AD pathogenesis, are also involved in sleep-circadian disorders. For example, miR-219 is reported to be overexpressed in postmortem brain tissues of AD patients and interestingly, miR-219 regulates Tau phosphorylation and targets GSK-3 which is vital for phosphorylating PER genes (Kinoshita et al., <xref ref-type="bibr" rid="B109">2020</xref>). Moreover, miR-219 modulates CLOCK-BMAL1 complex. Similarly, miR-132 modulates GSK-3 and Tau Phosphorylation and it is downregulated in AD neurons (El Fatimy et al., <xref ref-type="bibr" rid="B53">2018</xref>).</p>
<p>MiR-125a, miR-125b, miR-146a have high diagnostic potential to predict AD progression, where they modulate Tau hyperphosphorylation (Nagaraj et al., <xref ref-type="bibr" rid="B161">2019</xref>), inflammatory responses and autophagy in microglia and astrocytes, while regulating PER genes in the circadian clock (Lee et al., <xref ref-type="bibr" rid="B119">2016</xref>; Liang et al., <xref ref-type="bibr" rid="B130">2021</xref>). MiR-125 also regulates the cholinergic functions via modulating CLOCK gene. Meanwhile miR-146a is associated with short sleep (Davis et al., <xref ref-type="bibr" rid="B43">2007</xref>; Karabulut et al., <xref ref-type="bibr" rid="B104">2019</xref>) and shows rhythmic expression. It is worth mentioning that miR-146a shows remarkable potential as a diagnostic AD biomarker (Siedlecki-Wullich et al., <xref ref-type="bibr" rid="B204">2019</xref>). Differential expression of miR-34a has also been detected in the brains and blood of AD patients, where it regulates genes involved in memory formation, amyloid precursor protein metabolism and Tau phosphorylation (Sarkar et al., <xref ref-type="bibr" rid="B196">2016</xref>). Intersecting with these functions, miR-34a also regulates PER1 and PER2 genes. MiR-29 family members are established as potential indicators of AD status. In line, miR-29a, b, c are also involved in regulating PER genes, &#x003B2;-secretase (BACE1) mRNA and A&#x003B2; accumulation (M&#x000FC;ller et al., <xref ref-type="bibr" rid="B154">2016</xref>). Similarly, miR-107 is down regulated in the temporal cortex and plasma of AD patients and it targets both <italic>CLOCK</italic> gene and <italic>BACE1</italic> expression.</p>
<p>MiR-155 is among the most well-studied microRNAs in AD-neuroinflammation. The high expression level of miR-155 in 3xTg AD animal model is accompanied with hyperactivation of microglia and astrocytes, to trigger inflammatory mediators. Moreover, miR-155 contributes to AD through activating different T cell functions during inflammation. Clinically, miR-155 is upregulated in human AD brains and it aggravates neuroinflammation (Kou et al., <xref ref-type="bibr" rid="B110">2020</xref>). Similarly, miR-181 family impaired levels are also repeatedly reported in AD and are linked to accumulated plaque formation in the temporal complex and regulation of inflammation cytokine TNF-&#x003B1; and IL-6 (Kou et al., <xref ref-type="bibr" rid="B110">2020</xref>). Both miR-155 and miR-181 have been linked to sleep disorders in AD as well as other neurodegenerative disorders (Slota and Booth, <xref ref-type="bibr" rid="B208">2019</xref>).</p>
<p>Despite the scarcity of studies exploring miRNAs in AD- associated sleep disorders, the previously mentioned data strongly suggests the association between miRNAs dysregulations and sleep disorders together with other AD molecular disturbances. Clarifying this interconnected network with more studies, might unravel the molecular basis of sleep disturbances in AD and provide novel approaches for better and earlier management of AD.</p>
</sec>
</sec>
<sec id="s4">
<title>Pain: the Underestimated Companion in Alzheimer&#x00027;s Disease?</title>
<p>Alzheimer&#x00027;s is often co-morbid with chronic pain, where chronic pain prevalence is around 45.8% in AD (van Kooten et al., <xref ref-type="bibr" rid="B232">2016</xref>). Pain that results from damage of body tissues is classified as nociceptive pain, while pain resulting from direct consequence of a lesion or disease that affects the somatosensory system&#x0201D; is classified as neuropathic pain (NP) (Merskey et al., <xref ref-type="bibr" rid="B151">1994</xref>). Over the course of AD, AD patients can experience both nociceptive and neuropathic pain. And while, peripheral neuropathic lesions do not always cause chronic pain, central neuropathic pain is often chronic (Husebo et al., <xref ref-type="bibr" rid="B97">2016</xref>).</p>
<p>Due to their inability to communicate and express their needs, pain feeling is often overlooked in AD patients. However, pain is more prevalent with severe dementia (Rajkumar et al., <xref ref-type="bibr" rid="B180">2017</xref>), and its intensity is positively correlated with dementia severity (Whitlock et al., <xref ref-type="bibr" rid="B249">2017</xref>). Impaired pain perception that is mediated by central nervous system is crucial in chronic pain. Simultaneously, central sensitization of pain processing pathways impacts cognition and emotional processing. These pathological interactions imply the presence of deeper link between chronic pain and AD progressiveness.</p>
<p>The &#x0201C;locus coeruleus&#x0201D; (LC) modulates pain and is a key player in chronic pain processing (Taylor and Westlund, <xref ref-type="bibr" rid="B225">2017</xref>). It also innervates most brain areas and is the principal site of norepinephrine (NE) synthesis and neurotransmission in the CNS. The mechanistic processing underlying chronic pain is a complex issue that still needs to be resolved, nevertheless when experienced with AD.</p>
<p>Increasing evidence now shows that chronic pain and AD share disrupted function and structure of the LC. Moreover, both human and animal reports show that chronic pain induces microglial activation and neuroinflammation in hippocampus, anterior cingulate cortex, amygdala, nucleus accumbens, thalamus, and sensory cortex (Cao et al., <xref ref-type="bibr" rid="B29">2019</xref>). This is associated with elevated release of inflammatory cytokines; TNF-&#x003B1;, IL-6, IL-1&#x003B2; that trigger disruptions in synaptic remodeling, brain connectivity and network function. Interestingly, microglial activation and neuroinflammation are found to precede cognitive decline in AD patients, implying its participation in aggravating AD disease (Fan et al., <xref ref-type="bibr" rid="B57">2017</xref>). The chronic activation of microglia induces synaptic loss, and this occurs in both AD and chronic pain. Moreover, the prolonged exposure to amyloid depositions, has also been found to activate microglia, resulting in excessive secretion of synaptic-toxic cytokines, and tau accumulation that eventually cause synaptic loss and neuronal death (Cao et al., <xref ref-type="bibr" rid="B29">2019</xref>). Besides microglial activation, disrupted autophagy process has been increasingly reported as a significant contributor to both chronic pain and AD (Yin et al., <xref ref-type="bibr" rid="B263">2018</xref>).</p>
<p>It is established that miRNAs are key players in modulating macromolecular complexes in neurons, glia, and immune cells. They regulate signals interconnecting neuro-immune network in the pain pathway and are crucial modulators of inflammation and autophagy pathways; two major factors in AD progression as well as chronic pain (L&#x000F3;pez-Gonz&#x000E1;lez et al., <xref ref-type="bibr" rid="B138">2017</xref>; Bernaus et al., <xref ref-type="bibr" rid="B18">2020</xref>). As a result, miRNAs are now considered as significant &#x0201C;master switches&#x0201D; in chronic pain and AD. <xref ref-type="fig" rid="F4">Figure 4</xref> highlights the overlapping role of some miRNAs in AD and pain.</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p>Comprehensive illustration of the overlapping role of some miRNAs in both AD and Pain and their targeted genes. (Created with <ext-link ext-link-type="uri" xlink:href="https://BioRender.com">BioRender.com</ext-link>).</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fnagi-13-743573-g0004.tif"/>
</fig>
<p>For instance, miR-132 participates in regulating inflammation and is a negative regulator of the inflammatory response in PC12 cells. IL-1&#x003B2;, IL-6, TNF-&#x003B1; and TNF receptor associated factor 6 <italic>(TRAF6)</italic> are potential targets of miR-132 (Kou et al., <xref ref-type="bibr" rid="B110">2020</xref>). Recently upregulation of miR-132 in WBCs of patients were associated with chronic neuropathic pain (Leinders et al., <xref ref-type="bibr" rid="B123">2016</xref>). Interestingly, miR-132 is significantly reduced in the brains of AD patients and deletion of miR-132 in mice hastened A&#x003B2; accumulation, and tau pathology via modulating the synaptic proteins (Xu N. et al., <xref ref-type="bibr" rid="B254">2019</xref>). In line, the down regulation of miR-132 was found to inhibit the level of hippocampal acetylcholinesterase <italic>(AChE)</italic>, impacting both cognitive function and synaptic plasticity. The downstream molecules responsible for miR-132 actions involve both p250 GTPase Activating Protein <italic>(p250GAP)</italic> and Methyl CpG-Binding Protein 2 <italic>(MeCP2)</italic> (Ye et al., <xref ref-type="bibr" rid="B262">2016</xref>).</p>
<p>MiR-155 is one of the most prominent miRNAs that are differentially expressed in AD serum and brain. Recent reports confirm that miR-155 has significant impact on development of pain and pain hypersensitivity, where up-regulation of miR-155 is accompanied by enhanced activation of microglia and consequent production of inflammatory mediators (Kou et al., <xref ref-type="bibr" rid="B110">2020</xref>). Moreover, miR-155 is a significant regulator of neuropathic pain via targeting serum and glucocorticoid regulated protein kinase 3 <italic>(SGK3)</italic>, an important protein involved in phosphorylation cascades (Liu et al., <xref ref-type="bibr" rid="B135">2015</xref>).</p>
<p>Similarly, Let-7 is critical for maintaining microglial function in inflammation-mediated injury (Roush and Slack, <xref ref-type="bibr" rid="B190">2008</xref>). Let-7a inhibits the expression of inflammatory cytokines via activation of apoptosis signal-regulating kinase 1 (ASK1), IL-10 and <italic>Mycs</italic> in microglia (Song and Lee, <xref ref-type="bibr" rid="B211">2015</xref>). Meanwhile, let-7 miRNAs are found to be differentially and specifically released in CSF of AD patients (Derkow et al., <xref ref-type="bibr" rid="B45">2018</xref>). MiR-124 is another brain-enriched miRNA involved in the regulation of neural development. Increasing reports spot its role as a remarkable alleviator of neuropathic pain, via inhibiting (IL-6, IL-1&#x003B2;, and TNF-&#x003B1;) protein expressions and direct targeting of Enhancer of zeste homolog 2 <italic>EZH2</italic> gene (Zhang et al., <xref ref-type="bibr" rid="B267">2019</xref>). Moreover, miR-124 regulates BACE1 enzyme and is found to decrease gradually with AD progression (An et al., <xref ref-type="bibr" rid="B9">2017</xref>). Most importantly, updated studies are now spotting miR-124 as a therapeutic target for its role in modulating inflammation in the central nervous system and brain injuries (Xu et al., <xref ref-type="bibr" rid="B253">2021</xref>).</p>
<p>MiR-21 is another interesting miRNA regulator of pain that is increasingly reported as a significant contributor against AD progressive events. MiR-21 can inhibit cell apoptosis induced by A&#x003B2;<sub>1&#x02212;42</sub> via modulating cell death protein 4 <italic>(PDCD4)</italic>/phosphatidylinositol 3-kinase PI3K/AKT/GSK-3&#x003B2; pathway in the CNS (Feng et al., <xref ref-type="bibr" rid="B59">2018</xref>). Meanwhile circulating miR-21-5p was significantly upregulated in the plasma of AD patients and was negatively correlated to cognitive impairment (Giuliani et al., <xref ref-type="bibr" rid="B70">2021</xref>). Simultaneously, disturbed level of miR-21 was observed in diverse neuropathic pain models (Zhong et al., <xref ref-type="bibr" rid="B272">2019</xref>) where it targets metalloproteinase-3 <italic>(TIMP3)</italic> and chemokines C-C motif ligand 1 <italic>(CCL1)</italic> that consequently evoke cytokine production of TNF-&#x003B1;, IL-1&#x003B2;, and IL-6 and aggravate neuroinflammation.</p>
<p>MiR-146a-5p is reported to modulate immune response and reduce inflammation by targeting both <italic>TRAF6</italic> and interleukin-1 receptor-associated kinase 1 <italic>(IRAK1) IRAK1</italic> in macrophages, and astrocytes. Lu et al. (<xref ref-type="bibr" rid="B139">2015</xref>) reported the protective effect of miR-146a against SNL-induced neuropathic pain by suppressing <italic>TRAF6</italic> signaling in the spinal cord (Lu et al., <xref ref-type="bibr" rid="B139">2015</xref>). Meanwhile, multiple studies linked miR-146a-5p with cognitive deterioration, where its upregulation in the CNS is associated with increased expression of A&#x003B2;, Taup38, and Reactive oxygen species (ROS) through targeting <italic>MAPK</italic> signaling (Alexandrov et al., <xref ref-type="bibr" rid="B4">2014</xref>).</p>
<p>One of the emerging and promising miRNAs in both AD pathology and chronic pain is miR-218. Recently miR-218 upregulation was found to contribute to AD progression by enhancing Tau phosphorylation and disrupting mitochondrial respiratory chain through modulating <italic>Wnt</italic> signaling pathway (Gugliandolo et al., <xref ref-type="bibr" rid="B78">2020</xref>; Wu et al., <xref ref-type="bibr" rid="B250">2020</xref>). Meanwhile, downregulation of miR-218 was proved effective in suppressing central neuropathic pain via regulating cytokine signaling (Li and Zhao, <xref ref-type="bibr" rid="B128">2016</xref>).</p>
<p>Elucidating the regulatory role of miRNAs on pain sensitization, neuropathic pain and the interplay with cognition and behavior alterations in AD, can unleash new resolutions on the pathophysiology of chronic pain in AD. Considering the common role of miRNAs in regulating chronic pain and its possible contribution in worsening cognitive impairment, miRNAs might also provide a prognostic tool to predict susceptible AD patients.</p>
<sec>
<title>MicroRNAs as Diagnostic Biomarkers of AD</title>
<p>Current AD diagnostic markers and methods are applicable in the late stages of AD. Ultimately, they can be classified into (1) Neuropsychological tests: which are cognitive assessments used to quantitatively assess the degree of cognitive impairment and its progression over time. This method, however, has limited specificity and sensitivity and is majorly affected by patients&#x00027; educational levels. (2) Neuroimaging examination: such as Magnetic resonance imaging (MRI) and fluorodeoxyglucose (FDG)-positron emission tomography (PET) that monitor the pathological and functional alterations before severe appearance of cognitive impairment (Calvillo and Irimia, <xref ref-type="bibr" rid="B28">2020</xref>). However, this method is hugely limited by the high cost.</p>
<p>Recent trials reported the high diagnostic potential of Amyloid and Phosphorylated Tau /A&#x003B2; ratio in CSF samples. Yet again, this technique is highly invasive and requires well-trained personnel for sample acquisitions. The detection of neuro filament light chains (NFL) in biological samples is emerging as good neuronal biomarkers, however, techniques and kits for reliable detection are still limited, and more research studies are needed to explore their ability to differentiate between different neurodegenerative diseases (Gaetani et al., <xref ref-type="bibr" rid="B62">2019</xref>).</p>
<p>In the previous decade, the reported differential expressions of miRNAs in animal models of AD have opened the field to unleash the potential of miRNAs as promising diagnostic biomarkers for multiple neurodegenerative diseases. Moreover, continuous reports show that specific miRNAs are detected in the biofluids of AD patients with different levels from normal controls, along with their correlation to AD observed pathological and cognitive changes (Wei et al., <xref ref-type="bibr" rid="B245">2020</xref>). A point that can be optimized to monitor AD progression. Furthermore, circulating miRNAs that are collected from serum or plasma resist environmental degradation and can provide a cheaper and less-invasive diagnostic means, compared to neuroimaging and CSF examinations. Ongoing research continuously reveals the remarkable diagnostic potential of miRNAs in AD. <xref ref-type="table" rid="T6">Table 6</xref> presents an updated summary for different miRNAs that have shown promising potential as AD diagnostic markers.</p>
<table-wrap position="float" id="T6">
<label>Table 6</label>
<caption><p>MicroRNAs with diagnostic potential in human AD studies.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>miRNA</bold></th>
<th valign="top" align="left"><bold>Sample</bold></th>
<th valign="top" align="left"><bold>Expression in AD</bold></th>
<th valign="top" align="left"><bold>Studied cohort</bold></th>
<th valign="top" align="left"><bold>Specificity/sensitivity</bold></th>
<th valign="top" align="left"><bold>References</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">miRNA-483-5p</td>
<td valign="top" align="left">Plasma</td>
<td valign="top" align="left">Increased</td>
<td valign="top" align="left">20 MCI<break/> 20 AD<break/> 20 Healthy controls</td>
<td valign="top" align="left">95, 90%85, 90%</td>
<td valign="top" align="left">Sabry et al., <xref ref-type="bibr" rid="B191">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-26a</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">121 AD, 48 HC</td>
<td valign="top" align="left">57, 85%</td>
<td valign="top" align="left">Guo et al., <xref ref-type="bibr" rid="B79">2017</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-34a</td>
<td valign="top" align="left">Plasma<break/> CSF</td>
<td valign="top" align="left">Increased<break/> Decreased</td>
<td valign="top" align="left">25 AD, 27 HC<break/> 10 AD, 10 HC</td>
<td valign="top" align="left">74, 84%</td>
<td valign="top" align="left">Cos&#x000ED;n-Tom&#x000E1;s et al., <xref ref-type="bibr" rid="B39">2017</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-125b</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Increased</td>
<td valign="top" align="left">105 AD, 155 HC</td>
<td valign="top" align="left">68, 80%</td>
<td valign="top" align="left">Tan et al., <xref ref-type="bibr" rid="B221">2014a</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-181a</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">121 AD, 86 HC</td>
<td valign="top" align="left">73, 72%</td>
<td valign="top" align="left">Ansari et al., <xref ref-type="bibr" rid="B10">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-181c</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">150 HC, 105 AD</td>
<td valign="top" align="left">64, 75%</td>
<td valign="top" align="left">Manzano-Crespo et al., <xref ref-type="bibr" rid="B145">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-206</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">66 MCI, 33 HC</td>
<td valign="top" align="left">100, 70%</td>
<td valign="top" align="left">Xie et al., <xref ref-type="bibr" rid="B252">2015</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-342-3p</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">158 AD, 155 HC</td>
<td valign="top" align="left">70, 81</td>
<td valign="top" align="left">Tan et al., <xref ref-type="bibr" rid="B222">2014b</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-34c</td>
<td valign="top" align="left">Blood mononuclear cells</td>
<td valign="top" align="left">Increased</td>
<td valign="top" align="left">110 AD, 123 HC</td>
<td valign="top" align="left">74, 84%</td>
<td valign="top" align="left">Bhatnagar et al., <xref ref-type="bibr" rid="B19">2014</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-133b</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">98 AD, 105 HC</td>
<td valign="top" align="left">74.3, 90%</td>
<td valign="top" align="left">Yang et al., <xref ref-type="bibr" rid="B258">2019</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-433a</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">32 AD, 12 HC</td>
<td valign="top" align="left">0.82 AUC</td>
<td valign="top" align="left">Wang and Zhang, <xref ref-type="bibr" rid="B240">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-103</td>
<td valign="top" align="left">Plasma</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">120 AD, 120 PD,<break/> 120 HC</td>
<td valign="top" align="left">84, 80%</td>
<td valign="top" align="left">Wang J. et al., <xref ref-type="bibr" rid="B238">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-106</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">56 AD, 50 HC</td>
<td valign="top" align="left">62, 94%</td>
<td valign="top" align="left">Madadi et al., <xref ref-type="bibr" rid="B143">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-9</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">36 AD female patients 38 HC females</td>
<td valign="top" align="left">Not available</td>
<td valign="top" align="left">Souza et al., <xref ref-type="bibr" rid="B213">2020</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-29cmiR-19b</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Decreased</td>
<td valign="top" align="left">45 AD, 40HC</td>
<td valign="top" align="left">Not available</td>
<td valign="top" align="left">Wu et al., <xref ref-type="bibr" rid="B251">2017</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-455-3p</td>
<td valign="top" align="left">Serum</td>
<td valign="top" align="left">Increased</td>
<td valign="top" align="left">11 AD, 18 MCI, 20 Healthy</td>
<td valign="top" align="left">AUC 79%</td>
<td valign="top" align="left">Kumar et al., <xref ref-type="bibr" rid="B116">2017</xref></td>
</tr>
<tr>
<td valign="top" align="left">miR-let-7b</td>
<td valign="top" align="left">CSF</td>
<td valign="top" align="left">Increased</td>
<td valign="top" align="left">41 memory complaints, 36 MCI, 17 AD patients</td>
<td valign="top" align="left">Addition to total and <italic>p- tau</italic> panel led to improved AUC to 91.6%</td>
<td valign="top" align="left">Liu et al., <xref ref-type="bibr" rid="B136">2018</xref></td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Spotting the most prominent miRNAs, recent studies have investigated the predictive potential of miRNAs in longitudinal studies over time. In an updated study, plasma miR-206 level stands out as a good prognostic biomarker to monitor MCI progression to AD over a period of 5 years (Kenny et al., <xref ref-type="bibr" rid="B106">2019</xref>). In the same context, Ansari et al. (<xref ref-type="bibr" rid="B10">2019</xref>) showed the ability of miR-181a and miR-146a blood levels to predict whether MCI would progress to AD or remain stable after 2 years monitoring (Ansari et al., <xref ref-type="bibr" rid="B10">2019</xref>).</p>
<p>Specific single miRNAs have shown consistent differentially expressed levels in various AD samples. For instance, Persistent miR-26b upregulation is reported in both serum and whole blood AD samples (Galimberti et al., <xref ref-type="bibr" rid="B63">2014</xref>). Yang et al. (<xref ref-type="bibr" rid="B259">2018</xref>), recently spotted the diagnostic ability of exosomal miR-384, as its expression in serum of AD and non-AD patients differ significantly. Furthermore, serum level of exosomal miR-384 showed potent differential diagnostic ability for AD and Parkinson&#x00027;s dementia, as well as for AD and vascular dementia, with sensitivity/specificity indices of 97.2/100% and 99.1/100%, respectively (Yang et al., <xref ref-type="bibr" rid="B259">2018</xref>).</p>
<p>One of the most emerging and promising miRNAs in AD diagnosis is miR-455-3p. Where serum miR-455-3p is upregulated in AD patients as compared to both MCI subjects and healthy controls. Interestingly, this finding is also confirmed in fibroblast cells, postmortem AD brains examination at different Braak stages (Kumar et al., <xref ref-type="bibr" rid="B116">2017</xref>; Kumar and Reddy, <xref ref-type="bibr" rid="B112">2018</xref>), as well as in CSF samples of sporadic AD subjects (Kumar and Reddy, <xref ref-type="bibr" rid="B115">2021</xref>). Analyzing the mechanistic effects of miR-455-3p in AD showed that <italic>APP</italic> is a validated target of miR-455-3p. Whereas, elevated levels of miR-455-3p help to alleviate A&#x003B2; toxicity, improve mitochondrial dynamics and synaptic activity (Kumar and Reddy, <xref ref-type="bibr" rid="B113">2019</xref>).</p>
<p>Another important concept is the utilization of miRNA panels of multiple miRNAs as a signature for AD. This can provide higher accuracy, specificity, and sensitivity. In this context, miR-181c, miR-92a-3p, and miR-210-3p showed remarkable ability to differentiate between AD and healthy controls. Moreover, this signature panel showed promising results in predicting MCI progression to AD after monitoring patients for 1 to 11 years (Siedlecki-Wullich et al., <xref ref-type="bibr" rid="B204">2019</xref>). Additionally, a serum 9-miNRA signature panel including; miR-26a-5p, hsa-miR-181c-3p, hsa-miR-126-5p, hsa-miR-22-3p, hsa-miR-148b-5p, hsa-miR-106b-3p, hsa-miR-6119-5p, hsa-miR-1246, and hsa-miR-660-5p was recently reported to differentiate between AD and healthy controls with an AUC ROC reaching 85%, in a study that comprised one of the biggest cohorts of AD patients (Guo et al., <xref ref-type="bibr" rid="B79">2017</xref>).</p>
<p>Although, miRNAs possess the properties of good diagnostic tools, miRNA use is still faced by several limitations. Namely, the parameters used for groups classification, subjects&#x00027; inclusion and exclusion criteria, miRNAs extraction and quantification methods and reliable reference genes, vary widely among different labs. This is why finding a method to standardize miRNAs isolation and quantification protocols, as well as recruiting wider and more diverse populations can provide deeper knowledge about miRNA diagnostic potential.</p>
</sec>
<sec>
<title>The Therapeutic Potential of miRNAs in AD</title>
<p>The cumulative knowledge on miRNAs functions, strongly implies their potential as an emerging therapeutic possibility for multiple AD pathologies. Generally, therapeutic intervention using miRNAs can take three approaches: (1) Using natural or synthetic compounds to modulate the expression of miRNAs (2) inhibiting the function of a particularly targeted miRNA using complementary single stranded antisense oligonucleotide (ASO). (3) Readjusting the expression of the targeted miRNA using miRNA mimics. So far, several trials have been conducted to adjust miRNA expression in AD animal models as well as cell lines.</p>
<p>Numerous studies used natural or synthetic compounds to readjust miRNAs expressions. Among the most characteristic trials, Osthole is reported to modulate the expression of miR-9 and miR 101a-3p in APP/PS1 mice, SHSY-5Y cells as well as neural stem cells. Consequently, this resulted in decreased cellular apoptosis, improved cell growth, improved learning and memory capacities, together with prevention of A&#x003B2; aggregation (Li et al., <xref ref-type="bibr" rid="B129">2017</xref>). Berberine was also reported to remodulate the expression of miR-188 in BV2 cells, resulting in remarkable inhibition of Apoptosis (Chen et al., <xref ref-type="bibr" rid="B33">2020</xref>). The Chinese herbal Tiaoxin recipe was recently reported to inhibit miR-34a expression in APPswe/PS1&#x00394;E9 mouse AD model leading to decreased A&#x003B2; aggregation (Hu Y.-R. et al., <xref ref-type="bibr" rid="B92">2019</xref>). A combination of resveratrol and curcumin was also successfully reported to readjust the expression of cortical let-7c in rats and PC-12 cells, which led to significant reduction of neuroinflammation along with readjustment of &#x003B2;-secretase and APP expressions (Zaky et al., <xref ref-type="bibr" rid="B265">2017</xref>). In the same context, Sun et al. (<xref ref-type="bibr" rid="B217">2020</xref>), recently reported the ability of Dexmedetomidine to upregulate miR-129 in NIH Swiss mice, which led to cognitive improvement through targeting <italic>YAP1</italic> gene (Sun et al., <xref ref-type="bibr" rid="B217">2020</xref>).</p>
<p>The continuous advances in drug delivery and biotechnology help in the rapid progress toward specific miRNA targeting and delivery. Interestingly, a recent study that used engineered exosomes to deliver miR-29 in a rat model of induced A&#x003B2; pathology, showed significant improvement of memory deficits (Jahangard et al., <xref ref-type="bibr" rid="B99">2020</xref>). Meanwhile, photoactivation of targeted miRNAs, miRNAs sponges that sequester a specific miRNA and inclusion of miRNAs in labeled liposomes or cubosomes to cross the blood brain barrier are all emerging innovative means that can be optimized in the near future for miRNA delivery (L&#x000F3;pez-Gonz&#x000E1;lez et al., <xref ref-type="bibr" rid="B138">2017</xref>).</p>
</sec>
</sec>
<sec id="s5">
<title>Discussion and Outline</title>
<sec>
<title>Current Hopes, Challenges, and Future Perspectives</title>
<p>There is no doubt miRNAs provide a novel opportunity to tackle AD disease, either through their potential as earlier diagnostic markers or through modulating their expression to reinstate the relevant AD target genes.</p>
<p>One interesting point is that along our research, numerous miRNAs apparently act as multi-faceted modulators of AD-interconnected signaling pathways. A point that can be advantageous in re-adjusting the different impaired pathways affected by miRNAs dysregulations. Furthermore, despite their nature as epigenetic modulators that can influenced by environmental and ethnic variations, multiple miRNA panels were repeatedly reported in different AD studies of variable regions and populations. For instance, miRNAs including but not restricted to; miR-155, miR-146a, miR-34a, miR-29, miR-132, miR-483-5p, and miR-181 are reported as differentially expressed in multiple AD samples of Chinese, American, European populations (Cheng et al., <xref ref-type="bibr" rid="B36">2015</xref>; Wei et al., <xref ref-type="bibr" rid="B245">2020</xref>; Huaying et al., <xref ref-type="bibr" rid="B95">2021</xref>; Siedlecki-Wullich et al., <xref ref-type="bibr" rid="B205">2021</xref>), as well as emerging studies from Africa and middle eastern regions (Sabry et al., <xref ref-type="bibr" rid="B191">2020</xref>). At the same time, these miRNAs have also been introduced as crucial modulators of A&#x003B2; and Tau pathologies, inflammatory, mitochondrial, and synaptic dysfunctions that accompany AD progression.</p>
<p>An emerging hot topic in AD pathology is the role of mitochondrial miRNAs in mitochondrial dysfunction and mitophagy that are highly likely to precede actual AD neuronal damage (John et al., <xref ref-type="bibr" rid="B102">2020</xref>). And while recent studies show miR-7, miR-155, miR-210 and miR-125 as crucial in mitochondrial impairments accompanying cancer (Ortega et al., <xref ref-type="bibr" rid="B166">2020</xref>), we are still scratching the surface concerning mitomiRs in &#x0201C;inflamm-aging &#x0201C;axis and AD.</p>
<p>Another hot topic in AD dilemma is the promising role of lactate level in astrocytes and its possible effect on reinstating cognitive decline of AD. Updated studies spot the role of miRNAs; miR-34a (Sarkar et al., <xref ref-type="bibr" rid="B196">2016</xref>), exosomal miR-137 (Thomas et al., <xref ref-type="bibr" rid="B227">2020</xref>) and miR-124-3p (Xu S.-Y. et al., <xref ref-type="bibr" rid="B255">2019</xref>) in controlling astrocytes lactate shuttle in different brain disorders and the consequent impact of adjusting their levels on cognitive improvement. Further future studies can definitely elucidate more facts about miRNAs role in astrocyte metabolism during AD and unravel ways to use this knowledge.</p>
<p>That being said, it is inevitable to state that till date, miRNAs bench studies are still faced by several obstacles that need to be resolved before being capable of efficiently serving AD clinical applications.</p>
<p>For a beginning, till now, there are limitations in comparing miRNA studies due to the basal differences in AD stages of the recruited patients and unclear specificity to AD. Moreover, communication difficulties with AD patients and their caregivers, comprise a major challenge by itself to recruit bigger populations of AD patients. To improve comparability in miRNAs studies, classifying the recruited patients in comparable groups according to their disease stages, followed by correlating their pathology with their miRNA&#x00027;s profiles can be more reliable.</p>
<p>Another challenge is the scarcity of data originating from middle and low-income countries and the relatively small populations size in AD clinical studies that majorly originate from well-developed countries. This can be resolved by enhancing the means of reaching out to affected communities, performing more longitudinal studies, together with utilizing advanced screening techniques, and raising awareness about the critical significance of participating in AD studies.</p>
<p>On the technical level, an important challenge in miRNAs studies, is the wide variability in sample collection, storage, standardization against reference controls, and analytical protocols (Mushtaq et al., <xref ref-type="bibr" rid="B157">2016</xref>). Multi-center comparisons and universal standardization of the used techniques would to a large extent improve miRNAs reliability.</p>
<p>Indeed, efficient use of miRNAs for AD diagnosis, still needs to be preceded by precise standardization of sampling and quantification protocols and proper staging of AD. It might also be useful to rely on multiple panels of miRNA or combinations of miRNAs together with other fluid biomarkers. Progresses in this aspect are continuously accomplished. Interestingly, some registered clinical trials are already running for example: (NCT03388242) that is using a combination of microRNAs and proteins with different expression patterns to distinguish between normal control, MCI and AD patients (Zuo, <xref ref-type="bibr" rid="B274">2019</xref>).</p>
<p>Therapeutically, miRNAs use is challenged by some issues. Firstly, miRNAs target multiple genes and hence, manipulating one miRNA can result in unwanted effects on other sides (Siedlecki-Wullich et al., <xref ref-type="bibr" rid="B205">2021</xref>). However, advances in <italic>in silico</italic> analysis and neuroinformatics can help face this problem. Besides, conducting more studies from diverse populations can contribute to getting more precise data that guide researchers to the proper beginning concerning their targeted population. Moreover, identification of the individual roles of specific miRNAs, as well as the collective role of multiple miRNAs in AD should be explored.</p>
<p>Another challenge is the difficulty of efficient miRNA delivery to the brain. However, the increasing advances in nanotechnology (Abdel-Mageed et al., <xref ref-type="bibr" rid="B2">2021</xref>) and targeted delivery of biological materials have been successfully reported in some AD animal models.</p>
<p>Interestingly, miR-155 is already entering a clinical phase trial as a therapeutic compound registered by &#x000A9;Miragen Therapeutics against Amyotrophic lateral sclerosis (Chakraborty et al., <xref ref-type="bibr" rid="B30">2021</xref>). We believe, the near future can witness similar clinical successes to face the challenging pathologies of AD.</p>
</sec>
</sec>
<sec id="s6">
<title>Author Contributions</title>
<p>NA and FN drafted the manuscript. AZ and AB performed critical editing. NA, MA, and FN participated in constructive outline, discussions, and editing. All authors read and approved the final manuscript.</p>
</sec>
<sec sec-type="funding-information" id="s7">
<title>Funding</title>
<p>This work was partially funded by the Science and Technology Development Fund (STDF), Egypt (Grant Number 39436) Youth Research Project.</p>
</sec>
<sec sec-type="COI-statement" id="conf1">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s8">
<title>Publisher&#x00027;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec> </body>
<back>
<ref-list>
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<glossary>
<def-list>
<title>Abbreviations</title>
<def-item><term>BACE1</term>
<def><p>Beta-Secretase 1</p></def></def-item>
<def-item><term>HEY2</term>
<def><p>Hairy/Enhancer-Of-Split Related With YRPW Motif Protein 2</p></def></def-item>
<def-item><term>APP</term>
<def><p>Amyloid beta precursor protein</p></def></def-item>
<def-item><term>MAPK</term>
<def><p>Mitogen-activated protein kinase</p></def></def-item>
<def-item><term>DUSP6</term>
<def><p>Dual specificity phosphatase 6</p></def></def-item>
<def-item><term>PPP1CA</term>
<def><p>Protein Phosphatase 1 Catalytic Subunit Alpha</p></def></def-item>
<def-item><term>PTBP2</term>
<def><p>Polypyrimidine Tract Binding Protein 2</p></def></def-item>
<def-item><term><italic>MeCP2</italic></term>
<def><p>Methyl-CpG Binding Protein 2</p></def></def-item>
<def-item><term>PTEN</term>
<def><p>Phosphatase And Tensin Homolog</p></def></def-item>
<def-item><term><italic>Fyn</italic></term>
<def><p>Proto-oncogene tyrosine-protein kinase Fyn</p></def></def-item>
<def-item><term>ERK1</term>
<def><p>extracellular signal-regulated kinase 1</p></def></def-item>
<def-item><term>ERK2</term>
<def><p>extracellular signal-regulated kinase 2</p></def></def-item>
<def-item><term>CREB</term>
<def><p>cAMP response element-binding protein</p></def></def-item>
<def-item><term>BDNF</term>
<def><p>Brain-derived neurotrophic factor</p></def></def-item>
<def-item><term><italic>EphB2</italic></term>
<def><p>Ephrin type-B receptor 2</p></def></def-item>
<def-item><term><italic>GRIA2</italic></term>
<def><p>Glutamate ionotropic receptor AMPA type subunit 2</p></def></def-item>
<def-item><term><italic>GRIN2B</italic></term>
<def><p>Glutamate Ionotropic Receptor NMDA Type Subunit 2B</p></def></def-item>
<def-item><term><italic>Syt-1</italic></term>
<def><p>Synaptotagmin1</p></def></def-item>
<def-item><term><italic>Syt-1A</italic></term>
<def><p>Syntaxin 1A</p></def></def-item>
<def-item><term><italic>NPTX1</italic></term>
<def><p>Neuronal Pentraxin 1</p></def></def-item>
<def-item><term><italic>AMPAR</italic></term>
<def><p>&#x003B1;-amino-3-hydroxy-5-methyl-4-isoxazolepropionicacid receptor</p></def></def-item>
<def-item><term><italic>GRIN2A</italic></term>
<def><p>Glutamate Ionotropic Receptor NMDA Type Subunit 2A</p></def></def-item>
<def-item><term><italic>EPHA4</italic></term>
<def><p>Ephrin type-A receptor 4</p></def></def-item>
<def-item><term><italic>Nrn1</italic></term>
<def><p>Neuritin 1</p></def></def-item>
<def-item><term><italic>Arpc3</italic></term>
<def><p>Actin Related Protein 2/3 Complex Subunit 3</p></def></def-item>
<def-item><term><italic>CPLX1</italic></term>
<def><p>Complexin 1</p></def></def-item>
<def-item><term><italic>CPLX2</italic></term>
<def><p>Complexin2</p></def></def-item>
<def-item><term><italic>STIM2</italic></term>
<def><p>Stromal Interaction Molecule 2</p></def></def-item>
<def-item><term>REST</term>
<def><p>RE1 Silencing Transcription Factor</p></def></def-item>
<def-item><term><italic>CX3CL1</italic></term>
<def><p>C-X3-C Motif Chemokine Ligand 1</p></def></def-item>
<def-item><term>CX3CR1</term>
<def><p>C-X3-C Motif Chemokine Receptor 1</p></def></def-item>
<def-item><term><italic>NPAS2</italic></term>
<def><p>Neuronal PAS Domain Protein 2</p></def></def-item>
<def-item><term><italic>DBP</italic></term>
<def><p>D-Box Binding PAR BZIP Transcription Factor</p></def></def-item>
<def-item><term><italic>Mycs</italic></term>
<def><p>MYC Proto-Oncogene</p></def></def-item>
<def-item><term><italic>YAP1</italic></term>
<def><p>Yes1 Associated Transcriptional Regulator</p></def></def-item>
<def-item><term><italic>C-MAf</italic></term>
<def><p>C musculoaponeurotic fibrosarcoma</p></def></def-item>
<def-item><term><italic>CCM1</italic></term>
<def><p>Cerebral cavernous malformations 1</p></def></def-item>
<def-item><term><italic>NOX2</italic></term>
<def><p>NADPH oxidase 2</p></def></def-item>
<def-item><term><italic>NOX4</italic></term>
<def><p>NADPH oxidase 4</p></def></def-item>
<def-item><term><italic>C/EBP-</italic>&#x003B1;</term>
<def><p>CCAAT/enhancer-binding protein alpha</p></def></def-item>
<def-item><term>TREM2</term>
<def><p>Triggering receptor expressed on myeloid cells 2.</p></def></def-item>
</def-list>
</glossary> 
</back>
</article> 